Vfaba.Hedin2.R1.2g129120.1

Transcript Overview


Name	Vfaba.Hedin2.R1.2g129120.1
Unique Name	Vfaba.Hedin2.R1.2g129120.1_vfh_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	447

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr2	chromosome	chr2:785717899..785718503 -	Vicia faba inbred line Hedin/2 genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba inbred line Hedin/2 genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins	2023-05-12
Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL	2023-05-12
Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot	2023-05-12
Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11	2023-05-12

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vfhzwsR207	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vfhzwsR248	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
asvfhL570	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asvfhL796	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cavfhL285	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cavfhL404	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
pvvfhL017	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
crvfhL520	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pvvfhL812	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
psvfhL425	Pisum sativum Cameor genome v1a	Pisum sativum
psvfhL455	Pisum sativum Cameor genome v1a	Pisum sativum
psvfhL553	Pisum sativum Cameor genome v1a	Pisum sativum
vfhvfhR125	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvfhL144	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tifvfhL214	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvuR275	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vfhvuR290	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anvfhL0322	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caivfhL569	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caivfhL582	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
anvfhL0368	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvfhL0748	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
vfhvrvR303	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvssR233	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vfhvuaR267	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vfhvssR275	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vfhvuaR279	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canvfhL235	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canvfhL355	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvfhL577	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvfhL815	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvfhL239		Cicer arietinum
carvfhL337		Cicer arietinum
ccavfhL298	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavfhL479	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vfhvumR290	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vfhvumR330	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vfhvvaR221	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vfhvvaR293	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vasvfhL252	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvfhL354	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vfhvstR262	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vfhvstR302	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
pvfvfhL015	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvfhL795	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vfhvunR257	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vfhvunR272	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
Psat5g083080.1	Pisum sativum Cameor genome v1a	Pisum sativum
jg54482.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
XM_058925505.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Psat05G0252200-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.2g129120	Vfaba.Hedin2.R1.2g129120_vfh_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.2g129120.1_vfh_v1-exon	Vfaba.Hedin2.R1.2g129120.1_vfh_v1-exon-chr2_vfh_v1:785717899..785718001	Vicia faba	exon
Vfaba.Hedin2.R1.2g129120.1_vfh_v1-exon	Vfaba.Hedin2.R1.2g129120.1_vfh_v1-exon-chr2_vfh_v1:785718160..785718503	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.2g129120.1_vfh_v1-cds	Vfaba.Hedin2.R1.2g129120.1_vfh_v1-cds-chr2_vfh_v1:785717899..785718001	Vicia faba	CDS
Vfaba.Hedin2.R1.2g129120.1_vfh_v1-cds	Vfaba.Hedin2.R1.2g129120.1_vfh_v1-cds-chr2_vfh_v1:785718160..785718503	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Hedin2.R1.2g129120.1_vfh_v1	Vfaba.Hedin2.R1.2g129120.1_vfh_v1	Vicia faba	polypeptide
Vfaba.Hedin2.R1.2g129120.1_vfh_v1	Vfaba.Hedin2.R1.2g129120.1_vfh_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3L2T9|A0A2K3L2T9_TRIPR (Stearoyl acyl carrier protein desaturase (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g028748 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.652e-55
Identity = 86/115 (74.78%), Postives = 98/115 (85.22%), Query Frame = 0

Query:    1 MAMAICSQLGARIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M MA+C+QLGA  P QC+LK SSKT L  +KTHSMP EKKE+FKSLE+W  Q++LPL KPVE+ WQPHDLLPDSSL + EF DQVKAL++RTAELPDDYLVVLVG MITEEALPT
Sbjct:    1 MMMAMCTQLGAWTPTQCHLKASSKTVLRAQKTHSMPPEKKEIFKSLESWVSQNVLPLAKPVEECWQPHDLLPDSSLSSGEFTDQVKALRDRTAELPDDYLVVLVGDMITEEALPT 115

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|G7J5N5|G7J5N5_MEDTR (Acyl-[acyl-carrier-protein] desaturase OS=Medicago truncatula OX=3880 GN=11422210 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.267e-49
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 0

Query:    1 MAMA-ICSQLGARIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M MA IC+   A  P QCY K  SKTF+  +KTHSM  EKKEVFKSLE W  QS+LPL+KPVE+SWQPHDLLPDSSLP+DEF+DQVKAL++RT ELPDDYLVVLVGGMITEEALPT
Sbjct:    1 MTMATICTH--AWPPLQCYQKAPSKTFIKPQKTHSMSPEKKEVFKSLEKWVSQSVLPLVKPVEESWQPHDLLPDSSLPSDEFIDQVKALRDRTNELPDDYLVVLVGGMITEEALPT 114

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VB73|A0A072VB73_MEDTR (Putative stearoyl-[acyl-carrier-protein] 9-desaturase OS=Medicago truncatula OX=3880 GN=25489755 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.672e-48
Identity = 84/118 (71.19%), Postives = 97/118 (82.20%), Query Frame = 0

Query:    1 MAMAICSQLG---ARIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M ++IC+Q G   ARIP QCYL  SSK  L  +KTHSMP EK EVFKSLE WA+QS+LPLIKPVE+SW+PHDLLPDS+L +DEF+DQVKAL++RT EL DDYLV L G MITEEALPT
Sbjct:    1 MVISICTQ-GLPLARIPIQCYLNSSSKITLRSQKTHSMPPEKIEVFKSLEKWALQSVLPLIKPVEESWRPHDLLPDSTLSSDEFIDQVKALRDRTNELSDDYLVALAGSMITEEALPT 117

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PRI1|A0A2Z6PRI1_TRISU (Acyl-[acyl-carrier-protein] desaturase OS=Trifolium subterraneum OX=3900 GN=TSUD_406800 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.322e-48
Identity = 81/118 (68.64%), Postives = 94/118 (79.66%), Query Frame = 0

Query:    1 MAMAICSQLGAR---IPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M MA+C+Q G      PPQC +K  SKT    +KTHSM  EKKE+FKSLE+W  Q++LPL KPVEK WQPHDLLP+SSLP+DEF+DQVK L+NRT ELP+DYLVVLVG MITEEALPT
Sbjct:    1 MLMAMCTQFGGAHTLTPPQCRIKTLSKTVQKAQKTHSMSPEKKEIFKSLESWVSQNVLPLAKPVEKCWQPHDLLPNSSLPSDEFIDQVKTLRNRTDELPNDYLVVLVGDMITEEALPT 118

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6N647|A0A2Z6N647_TRISU (Acyl-[acyl-carrier-protein] desaturase OS=Trifolium subterraneum OX=3900 GN=TSUD_396680 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.971e-47
Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0

Query:    1 MAMAICSQLGARIPPQCYLKDSSKT---FLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M M +C+QLGA  P QC+LK  SKT    L  +KTHSM  EKKE+FKSLE+W  Q++LPL KPVE+ WQPHDLLPDSSL + EF DQVKAL+ RTAELPDDYLVVLVG MITEEALP+
Sbjct:    2 MMMGMCTQLGAWTPTQCHLKAPSKTMKTILRAQKTHSMSPEKKEIFKSLESWVSQNVLPLAKPVEECWQPHDLLPDSSLSSGEFTDQVKALRYRTAELPDDYLVVLVGDMITEEALPS 119

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MW04|A0A2K3MW04_TRIPR (Acyl-[acyl-carrier-protein] desaturase OS=Trifolium pratense OX=57577 GN=L195_g018173 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.486e-47
Identity = 82/118 (69.49%), Postives = 93/118 (78.81%), Query Frame = 0

Query:    1 MAMAICSQLGA---RIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M MA+C+QL       PPQC +K  SKT   ++KTHSM  EKKE+FKSLE+W  Q++LPL KPVEK WQPHDLLPDSSL   EF DQVKAL++RTAELPDDYLVVLVG MITEEALPT
Sbjct:    1 MLMAMCTQLAGPHTLTPPQCRIKPPSKTVQKVQKTHSMAPEKKEIFKSLESWVSQNVLPLAKPVEKCWQPHDLLPDSSLSAGEFTDQVKALRDRTAELPDDYLVVLVGDMITEEALPT 118

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LMX9|A0A2K3LMX9_TRIPR (Stearoyl-ACP desaturase OS=Trifolium pratense OX=57577 GN=L195_g035878 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.029e-45
Identity = 80/119 (67.23%), Postives = 93/119 (78.15%), Query Frame = 0

Query:    1 MAMAICSQL----GARIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M MAIC+QL     A  P + +LK  SK  L  +KT S+  EKKE+FKSLE+W  Q++LPL KPVEK WQPHDLLP+SSL TDEF+DQVK L++RTAELPDDYLVVLVG MITEEALPT
Sbjct:    1 MMMAICTQLRAPPHAWTPTKSHLKSPSKPLLKAQKTQSLSPEKKEIFKSLESWVSQNVLPLAKPVEKCWQPHDLLPNSSLSTDEFIDQVKLLRDRTAELPDDYLVVLVGDMITEEALPT 119

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|G7J653|G7J653_MEDTR (Acyl-[acyl-carrier-protein] desaturase OS=Medicago truncatula OX=3880 GN=11413317 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.433e-44
Identity = 82/116 (70.69%), Postives = 93/116 (80.17%), Query Frame = 0

Query:    1 MAMA-ICSQLGARIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M MA IC+   A  P QC LK  SKTF+  +KTHSM  EKKEVFKSLE W  QS+LPL+KPVE+ WQPH+LLPDSSLP+DEF+  VKAL++RTAELPDDYLV LVG MITEEALPT
Sbjct:    1 MTMATICTH--AWSPLQCSLKAPSKTFIKPQKTHSMSPEKKEVFKSLEKWVSQSVLPLVKPVEECWQPHNLLPDSSLPSDEFIHLVKALRDRTAELPDDYLVALVGSMITEEALPT 114

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P9R2|A0A2Z6P9R2_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_400930 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.402e-44
Identity = 78/118 (66.10%), Postives = 94/118 (79.66%), Query Frame = 0

Query:    1 MAMAICSQLGA---RIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M M IC+QLGA     PP+C+LK  SK  L  +KTHS+  EKKE+ KSLE+W  +++LPL KPVE+ WQP DLLPDSSL +DEF DQVKAL++RTAELP+DYLVVLVG MITEE+LPT
Sbjct:    1 MMMTICTQLGAPHGWTPPKCHLKAQSKAVLKEQKTHSISPEKKEILKSLESWVSRNVLPLAKPVEECWQPRDLLPDSSLSSDEFTDQVKALRDRTAELPNDYLVVLVGDMITEESLPT 118

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PQT1|A0A2K3PQT1_TRIPR (Stearoyl acyl carrier protein desaturase OS=Trifolium pratense OX=57577 GN=L195_g014379 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.724e-43
Identity = 80/119 (67.23%), Postives = 93/119 (78.15%), Query Frame = 0

Query:    1 MAMAICSQL----GARIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            M MAIC+QL     A  P + +LK  SK  L  +KT S+  EKKE+FKSLE+W  Q++LPL KPVEK WQPHDLLP+SSL TDEF+DQVK L++RTAELPDDYLVVLVG MITEEALPT
Sbjct:    1 MMMAICTQLRAPPHAWTPTKSHLKSPSKPLLKAQKTQSLSPEKKEIFKSLESWVSQNVLPLAKPVEKCWQPHDLLPNSSLSTDEFIDQVKLLRDRTAELPDDYLVVLVGDMITEEALPT 119

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LF05|STAD3_ARATH (Stearoyl-[acyl-carrier-protein] 9-desaturase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-ACP-DES3 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 1.916e-31
Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 0

Query:   27 LNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            +N + TH++P EK E+FKS+ENWA Q LLP +KPVE SWQP D LP +    DEF D+VK ++ RT E+PDDY VVLVG MITEEALPT
Sbjct:   58 VNNQLTHTIPQEKLEIFKSMENWAEQKLLPYLKPVEDSWQPQDFLP-APENDDEFYDRVKEIRERTKEIPDDYFVVLVGDMITEEALPT 145

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q01753|STAD_SIMCH (Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic OS=Simmondsia chinensis OX=3999 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.079e-31
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 0

Query:   28 NLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            +++KTHSMP +K E+FKSLE WA +++L  +KPVEK WQP D LPD +  ++ FMDQVK L+ RT E+PD+YLVVLVG MITEEALPT
Sbjct:   60 HVQKTHSMPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFLPDPA--SEGFMDQVKELRERTKEIPDEYLVVLVGDMITEEALPT 145

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q84VY3|STAD6_ARATH (Stearoyl-[acyl-carrier-protein] 9-desaturase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-ACP-DES6 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 6.446e-31
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0

Query:   31 KTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            K H+MP EK E+FKSL+ WA   +LPL+KPV++ WQP   LPD +LP  EF DQV+ L+ RTA LPD+Y VVLVG MITE+ALPT
Sbjct:   51 KIHTMPPEKMEIFKSLDGWAKDQILPLLKPVDQCWQPASFLPDPALPFSEFTDQVRELRERTASLPDEYFVVLVGDMITEDALPT 135

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M880|STAD4_ARATH (Stearoyl-[acyl-carrier-protein] 9-desaturase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-ACP-DES4 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.294e-31
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 0

Query:    9 LGARIPP------QCYLKDSSKTFLNLRK-----THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            LG+   P       C   + SKTF  +++     TH++  EK E+FKS+ENWA ++LL  +KPVE SWQP D LP++    D F +QVK L++RT E+PDDY VVLVG MITEEALPT
Sbjct:   29 LGSSFSPPRHLQVSCVATNPSKTFRPIKEVSNQVTHTITQEKLEIFKSMENWAQENLLSYLKPVETSWQPQDFLPETK-DEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPT 145

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8LJJ9|STAD1_ORYSJ (Stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0880800 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.724e-30
Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 0

Query:   30 RKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            R THSMP EK EVF+SLE WA  SLLPL+KPVE+ WQP D LPDSS  ++ F  QV  L+ R A LPD+Y VVLVG MITEEALPT
Sbjct:   42 RVTHSMPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSS--SEMFEHQVHELRARAAGLPDEYFVVLVGDMITEEALPT 125

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|B8A7A3|STAD1_ORYSI (Stearoyl-[acyl-carrier-protein] 9-desaturase 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_04666 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.724e-30
Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 0

Query:   30 RKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            R THSMP EK EVF+SLE WA  SLLPL+KPVE+ WQP D LPDSS  ++ F  QV  L+ R A LPD+Y VVLVG MITEEALPT
Sbjct:   42 RVTHSMPPEKAEVFRSLEGWARSSLLPLLKPVEECWQPTDFLPDSS--SEMFEHQVHELRARAAGLPDEYFVVLVGDMITEEALPT 125

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M881|STAD2_ARATH (Stearoyl-[acyl-carrier-protein] 9-desaturase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-ACP-DES2 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.338e-29
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 0

Query:   32 THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            TH++  EK E+FKS+ENWA ++LL  +KPVE SWQP D LP+++   D F +QVK L++RT E+PDDY VVLVG MITEEALPT
Sbjct:   71 THTITQEKLEIFKSMENWAQENLLSYLKPVEASWQPQDFLPETN-DEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPT 153

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q42807|STAD_SOYBN (Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic OS=Glycine max OX=3847 GN=ACPD PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.618e-29
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 0

Query:   19 LKDSSKTFLNLRK------------THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            L+  SK   N++K            THSMP +K E+F+SLE+WA +++L  +KPVEK WQP D LPD S  +D F +QVK L+ R  ELPDDY VVLVG MITEEALPT
Sbjct:   32 LRSGSKEVENIKKPFTPPREVHVQVTHSMPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFLPDPS--SDGFEEQVKELRERAKELPDDYFVVLVGDMITEEALPT 138

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|P22337|STAD_RICCO (Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.044e-29
Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 0

Query:   19 LKDSSKTFLNLRK------------THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            LK  SK   NL+K            THSMP +K E+FKSL+NWA +++L  +KPVEK WQP D LPD +  +D F +QV+ L+ R  E+PDDY VVLVG MITEEALPT
Sbjct:   37 LKSGSKEVENLKKPFMPPREVHVQVTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPA--SDGFDEQVRELRERAKEIPDDYFVVLVGDMITEEALPT 143

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Match: sp|B9F058|STAD3_ORYSJ (Acyl-[acyl-carrier-protein] desaturase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0504800 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.936e-29
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 0

Query:   32 THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            TH++P EKKEVF SLE WA  ++LP +KPVE+SWQP D LPD   P+  F D+V AL+ R A LPDD+LV LVG M+TEEALPT
Sbjct:   63 THTLPPEKKEVFDSLEGWAADTILPYLKPVEESWQPQDHLPDPRSPS--FGDEVAALRERAAGLPDDHLVCLVGDMVTEEALPT 144

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT5G16230.1 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr5:5303394-5305944 FORWARD LENGTH=401 | 201606)

HSP 1 Score: 119.013 bits (297), Expect = 1.960e-32
Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 0

Query:   27 LNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            +N + TH++P EK E+FKS+ENWA Q LLP +KPVE SWQP D LP +    DEF D+VK ++ RT E+PDDY VVLVG MITEEALPT
Sbjct:   58 VNNQLTHTIPQEKLEIFKSMENWAEQKLLPYLKPVEDSWQPQDFLP-APENDDEFYDRVKEIRERTKEIPDDYFVVLVGDMITEEALPT 145

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT1G43800.1 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr1:16577662-16579549 FORWARD LENGTH=391 | 201606)

HSP 1 Score: 117.472 bits (293), Expect = 6.595e-32
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0

Query:   31 KTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            K H+MP EK E+FKSL+ WA   +LPL+KPV++ WQP   LPD +LP  EF DQV+ L+ RTA LPD+Y VVLVG MITE+ALPT
Sbjct:   51 KIHTMPPEKMEIFKSLDGWAKDQILPLLKPVDQCWQPASFLPDPALPFSEFTDQVRELRERTASLPDEYFVVLVGDMITEDALPT 135

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT3G02620.1 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr3:560256-561760 FORWARD LENGTH=403 | 201606)

HSP 1 Score: 117.472 bits (293), Expect = 7.462e-32
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 0

Query:    9 LGARIPP------QCYLKDSSKTFLNLRK-----THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            LG+   P       C   + SKTF  +++     TH++  EK E+FKS+ENWA ++LL  +KPVE SWQP D LP++    D F +QVK L++RT E+PDDY VVLVG MITEEALPT
Sbjct:   29 LGSSFSPPRHLQVSCVATNPSKTFRPIKEVSNQVTHTITQEKLEIFKSMENWAQENLLSYLKPVETSWQPQDFLPETK-DEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPT 145

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT3G02620.2 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr3:560247-561760 FORWARD LENGTH=406 | 201606)

HSP 1 Score: 117.472 bits (293), Expect = 7.929e-32
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 0

Query:    9 LGARIPP------QCYLKDSSKTFLNLRK-----THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            LG+   P       C   + SKTF  +++     TH++  EK E+FKS+ENWA ++LL  +KPVE SWQP D LP++    D F +QVK L++RT E+PDDY VVLVG MITEEALPT
Sbjct:   32 LGSSFSPPRHLQVSCVATNPSKTFRPIKEVSNQVTHTITQEKLEIFKSMENWAQENLLSYLKPVETSWQPQDFLPETK-DEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPT 148

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT3G02610.1 (| plant stearoyl-acyl-carrier desaturase family protein | Chr3:555671-557458 FORWARD LENGTH=411 | 201606)

HSP 1 Score: 114.005 bits (284), Expect = 1.369e-30
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 0

Query:   32 THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            TH++  EK E+FKS+ENWA ++LL  +KPVE SWQP D LP+++   D F +QVK L++RT E+PDDY VVLVG MITEEALPT
Sbjct:   71 THTITQEKLEIFKSMENWAQENLLSYLKPVEASWQPQDFLPETN-DEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPT 153

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT3G02610.2 (| plant stearoyl-acyl-carrier desaturase family protein | Chr3:555665-557458 FORWARD LENGTH=413 | 201606)

HSP 1 Score: 114.005 bits (284), Expect = 1.388e-30
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 0

Query:   32 THSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            TH++  EK E+FKS+ENWA ++LL  +KPVE SWQP D LP+++   D F +QVK L++RT E+PDDY VVLVG MITEEALPT
Sbjct:   73 THTITQEKLEIFKSMENWAQENLLSYLKPVEASWQPQDFLPETN-DEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPT 155

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT2G43710.1 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr2:18120107-18122495 FORWARD LENGTH=401 | 201606)

HSP 1 Score: 111.309 bits (277), Expect = 1.373e-29
Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 0

Query:   33 HSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            HSMP +K E+FKS+ENWA ++LL  +K VEKSWQP D LPD +  +D F DQV+ L+ R  ELPDDY VVLVG MITEEALPT
Sbjct:   68 HSMPPQKIEIFKSMENWAEENLLIHLKDVEKSWQPQDFLPDPA--SDGFEDQVRELRERARELPDDYFVVLVGDMITEEALPT 148

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT2G43710.2 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr2:18120107-18122495 FORWARD LENGTH=401 | 201606)

HSP 1 Score: 111.309 bits (277), Expect = 1.461e-29
Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 0

Query:   33 HSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            HSMP +K E+FKS+ENWA ++LL  +K VEKSWQP D LPD +  +D F DQV+ L+ R  ELPDDY VVLVG MITEEALPT
Sbjct:   68 HSMPPQKIEIFKSMENWAEENLLIHLKDVEKSWQPQDFLPDPA--SDGFEDQVRELRERARELPDDYFVVLVGDMITEEALPT 148

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT3G02630.1 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr3:562164-564524 FORWARD LENGTH=396 | 201606)

HSP 1 Score: 110.923 bits (276), Expect = 1.622e-29
Identity = 54/89 (60.67%), Postives = 67/89 (75.28%), Query Frame = 0

Query:   27 LNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            ++++  HSMP +K E+FKSLE WA ++LL  +KPVEKSWQP D LP+    ++ F DQVK L+ R  ELPDDY VVLVG MITEEALPT
Sbjct:   56 VHVQVKHSMPPQKLEIFKSLEGWADETLLTYLKPVEKSWQPTDFLPEPE--SEGFYDQVKELRERCKELPDDYFVVLVGDMITEEALPT 142

[Close]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Match: AT5G16240.1 (| Plant stearoyl-acyl-carrier-protein desaturase family protein | Chr5:5306981-5309639 FORWARD LENGTH=394 | 201606)

HSP 1 Score: 106.301 bits (264), Expect = 8.409e-28
Identity = 53/89 (59.55%), Postives = 66/89 (74.16%), Query Frame = 0

Query:   27 LNLRKTHSMPSEKKEVFKSLENWAVQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYLVVLVGGMITEEALPT 115
            ++L+  +SMP +K E+FKSLE WA  +LL  +KPVEKSWQP D LP+    ++ F DQVK L+ R  EL DDYL+VLVG MITEEALPT
Sbjct:   54 VHLQVKYSMPPQKLEIFKSLEGWANDNLLAYLKPVEKSWQPTDFLPEPE--SEGFYDQVKELRERCKELSDDYLIVLVGDMITEEALPT 140

The following BLAST results are available for this feature:

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A2K3L2T9\|A0A2K3L2T9_TRIPR	6.652e-55	74.78	Stearoyl acyl carrier protein desaturase (Fragment...	[more]
tr\|G7J5N5\|G7J5N5_MEDTR	2.267e-49	75.00	Acyl-[acyl-carrier-protein] desaturase OS=Medicago...	[more]
tr\|A0A072VB73\|A0A072VB73_MEDTR	4.672e-48	71.19	Putative stearoyl-[acyl-carrier-protein] 9-desatur...	[more]
tr\|A0A2Z6PRI1\|A0A2Z6PRI1_TRISU	6.322e-48	68.64	Acyl-[acyl-carrier-protein] desaturase OS=Trifoliu...	[more]
tr\|A0A2Z6N647\|A0A2Z6N647_TRISU	4.971e-47	69.49	Acyl-[acyl-carrier-protein] desaturase OS=Trifoliu...	[more]
tr\|A0A2K3MW04\|A0A2K3MW04_TRIPR	8.486e-47	69.49	Acyl-[acyl-carrier-protein] desaturase OS=Trifoliu...	[more]
tr\|A0A2K3LMX9\|A0A2K3LMX9_TRIPR	2.029e-45	67.23	Stearoyl-ACP desaturase OS=Trifolium pratense OX=5...	[more]
tr\|G7J653\|G7J653_MEDTR	1.433e-44	70.69	Acyl-[acyl-carrier-protein] desaturase OS=Medicago...	[more]
tr\|A0A2Z6P9R2\|A0A2Z6P9R2_TRISU	3.402e-44	66.10	Uncharacterized protein OS=Trifolium subterraneum ...	[more]
tr\|A0A2K3PQT1\|A0A2K3PQT1_TRIPR	1.724e-43	67.23	Stearoyl acyl carrier protein desaturase OS=Trifol...	[more]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
sp\|Q9LF05\|STAD3_ARATH	1.916e-31	62.92	Stearoyl-[acyl-carrier-protein] 9-desaturase 3, ch...	[more]
sp\|Q01753\|STAD_SIMCH	6.079e-31	63.64	Stearoyl-[acyl-carrier-protein] 9-desaturase, chlo...	[more]
sp\|Q84VY3\|STAD6_ARATH	6.446e-31	62.35	Stearoyl-[acyl-carrier-protein] 9-desaturase 6, ch...	[more]
sp\|Q9M880\|STAD4_ARATH	7.294e-31	50.85	Stearoyl-[acyl-carrier-protein] 9-desaturase 4, ch...	[more]
sp\|Q8LJJ9\|STAD1_ORYSJ	2.724e-30	67.44	Stearoyl-[acyl-carrier-protein] 9-desaturase 1, ch...	[more]
sp\|B8A7A3\|STAD1_ORYSI	2.724e-30	67.44	Stearoyl-[acyl-carrier-protein] 9-desaturase 1, ch...	[more]
sp\|Q9M881\|STAD2_ARATH	1.338e-29	61.90	Stearoyl-[acyl-carrier-protein] 9-desaturase 2, ch...	[more]
sp\|Q42807\|STAD_SOYBN	2.618e-29	54.13	Stearoyl-[acyl-carrier-protein] 9-desaturase, chlo...	[more]
sp\|P22337\|STAD_RICCO	4.044e-29	54.13	Stearoyl-[acyl-carrier-protein] 9-desaturase, chlo...	[more]
sp\|B9F058\|STAD3_ORYSJ	4.936e-29	63.10	Acyl-[acyl-carrier-protein] desaturase 3, chloropl...	[more]

BLAST of Vfaba.Hedin2.R1.2g129120.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G16230.1	1.960e-32	62.92	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]
AT1G43800.1	6.595e-32	62.35	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]
AT3G02620.1	7.462e-32	50.85	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]
AT3G02620.2	7.929e-32	50.85	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]
AT3G02610.1	1.369e-30	61.90	\| plant stearoyl-acyl-carrier desaturase family pr...	[more]
AT3G02610.2	1.388e-30	61.90	\| plant stearoyl-acyl-carrier desaturase family pr...	[more]
AT2G43710.1	1.373e-29	65.06	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]
AT2G43710.2	1.461e-29	65.06	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]
AT3G02630.1	1.622e-29	60.67	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]
AT5G16240.1	8.409e-28	59.55	\| Plant stearoyl-acyl-carrier-protein desaturase f...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005067	Fatty acid desaturase, type 2	PFAM	PF03405	FA_desaturase_2	coord: 38..116 e-value: 3.7E-26 score: 91.8
IPR005067	Fatty acid desaturase, type 2	PANTHER	PTHR31155	ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED	coord: 28..115
IPR012348	Ribonucleotide reductase-like	GENE3D	1.10.620.20	Ribonucleotide Reductase, subunit A	coord: 23..121 e-value: 3.8E-31 score: 110.3
IPR009078	Ferritin-like superfamily	SUPERFAMILY	47240	Ferritin-like	coord: 25..116

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:785717899..785718503-

mRNA sequence

>Vfaba.Hedin2.R1.2g129120.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g129120.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g129120.1; organism=Vicia faba; type=mRNA; length=447bp
ATGGCAATGGCAATATGCTCTCAACTAGGAGCAAGGATTCCACCACAGTG
TTATCTAAAAGACTCATCCAAAACATTCCTTAATCTCCGAAAGACACACT
CAATGCCATCAGAGAAAAAAGAAGTGTTCAAATCACTAGAAAACTGGGCA
GTGCAAAGTCTTTTACCACTAATCAAACCTGTGGAGAAGAGCTGGCAACC
GCATGACTTGTTGCCAGACTCGTCACTACCCACGGATGAGTTCATGGATC
AAGTGAAGGCCTTGAAAAATCGAACGGCCGAGCTTCCAGATGATTATCTT
GTAGTATTGGTGGGTGGCATGATCACCGAGGAAGCATTGCCTACAGATAT
GCTGAGTGGTCAGCTACACTCCTTTTGTCAGCTTGCACTCTTAAGAATTA
TGTTGTGTCCGAGACTTTCTTTAGGAAAGTCTGAAGAGTTGGATTGA

protein sequence of Vfaba.Hedin2.R1.2g129120.1_vfh_v1

>Vfaba.Hedin2.R1.2g129120.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g129120.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g129120.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=148bp
MAMAICSQLGARIPPQCYLKDSSKTFLNLRKTHSMPSEKKEVFKSLENWA
VQSLLPLIKPVEKSWQPHDLLPDSSLPTDEFMDQVKALKNRTAELPDDYL
VVLVGGMITEEALPTDMLSGQLHSFCQLALLRIMLCPRLSLGKSEELD

mRNA from alignment at chr2:785717899..785718503-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Hedin2.R1.2g129120.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g129120.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g129120.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:785717899..785718503- (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005067	Fatty_acid_desaturase-2
IPR012348	RNR-like
IPR009078	Ferritin-like_SF

Vocabulary: **Biological Process**
Term	Definition
GO:0006631	fatty acid metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0045300	stearoyl-[ACP] desaturase activity
GO:0016491	oxidoreductase activity

Search form

Vfaba.Hedin2.R1.2g129120.1