Vfaba.Hedin2.R1.2g170840.2

Transcript Overview
NameVfaba.Hedin2.R1.2g170840.2
Unique NameVfaba.Hedin2.R1.2g170840.2_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length537
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1069540340..1069541106 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR175Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR230Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR246Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL034Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL590Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL728Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL784Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL283Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL402Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL687Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0740Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0896Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL052Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL013Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL266Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL873Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL795Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL472Pisum sativum Cameor genome v1aPisum sativum
psvfhL488Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL012Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvfhR124Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL018Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL144Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR222Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR230Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR268Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR308Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvfhL0329Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL551Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0659Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0737Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0745Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0962Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR224Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR271Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR296Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR207Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR230Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR259Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR268Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR270Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR307Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR321Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL232Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL353Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL626Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL270Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL596Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL746Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL810Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL238Cicer arietinum
carvfhL327Cicer arietinum
carvfhL627Cicer arietinum
ccavfhL312Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL488Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL546Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR228Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR263Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR272Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR323Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR211Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR255Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR290Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL039Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL137Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL233Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL349Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR219Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR233Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR245Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR296Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL013Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL258Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL778Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR203Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR249Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR287Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g170840Vfaba.Hedin2.R1.2g170840_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-exonVfaba.Hedin2.R1.2g170840.2_vfh_v1-exon-chr2_vfh_v1:1069540340..1069540708Vicia fabaexon
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-exonVfaba.Hedin2.R1.2g170840.2_vfh_v1-exon-chr2_vfh_v1:1069540786..1069540869Vicia fabaexon
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-exonVfaba.Hedin2.R1.2g170840.2_vfh_v1-exon-chr2_vfh_v1:1069540944..1069541001Vicia fabaexon
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-exonVfaba.Hedin2.R1.2g170840.2_vfh_v1-exon-chr2_vfh_v1:1069541081..1069541106Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-cdsVfaba.Hedin2.R1.2g170840.2_vfh_v1-cds-chr2_vfh_v1:1069540340..1069540708Vicia fabaCDS
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-cdsVfaba.Hedin2.R1.2g170840.2_vfh_v1-cds-chr2_vfh_v1:1069540786..1069540869Vicia fabaCDS
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-cdsVfaba.Hedin2.R1.2g170840.2_vfh_v1-cds-chr2_vfh_v1:1069540944..1069541001Vicia fabaCDS
Vfaba.Hedin2.R1.2g170840.2_vfh_v1-cdsVfaba.Hedin2.R1.2g170840.2_vfh_v1-cds-chr2_vfh_v1:1069541081..1069541106Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g170840.2_vfh_v1Vfaba.Hedin2.R1.2g170840.2_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.2g170840.2_vfh_v1Vfaba.Hedin2.R1.2g170840.2_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NAW6|A0A2K3NAW6_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g022879 PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.738e-76
Identity = 143/192 (74.48%), Postives = 154/192 (80.21%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKS--VDYEDYDGKRATMEEKDEEE---DLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSP--LDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRTKRKTKFQK------HSFGGKQASEEPGGF-NEERK 178
            MDMSNYS+YNSESESGWTNYL+HSSFSE+HFN K+  VDYE      ATMEE++EEE   DLSMVSDASSGPP+YHVEEDYQQ YCVNWN S+    SKKKV E GRKSQ SS   LDDTASS V NYPKKKI+FS NGVVE NTLD SP FSATRTKRKTKFQK      HS GGKQAS+EPGGF +EERK
Sbjct:    1 MDMSNYSQYNSESESGWTNYLDHSSFSEQHFNRKNGKVDYE------ATMEEEEEEEEEEDLSMVSDASSGPPNYHVEEDYQQPYCVNWNSST----SKKKVKEFGRKSQHSSQSLLDDTASSPVFNYPKKKINFSENGVVE-NTLDSSPSFSATRTKRKTKFQKHSSFLEHSRGGKQASQEPGGFDDEERK 181          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A396J114|A0A396J114_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0134941 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 6.174e-75
Identity = 141/187 (75.40%), Postives = 156/187 (83.42%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEEKDEEE----DLSMVSDASSGPP-HYHVEEDYQQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRTKRKTKFQKHSF---GGKQASEEPGGFN-EERK 178
            MDMSNYS+YNSESESGWTNYLNHSSFSEEHFN KS    DY+GK ATMEE++EEE    DLSMVSDASSGPP +YHVEE+YQQ YCVNW+ S+S +  KK   E+GRKSQQSSPLDDTASS VLNYPK K++FS NG VE NTLD+SP FSATRTKRK+K QKHS    GGKQAS+EPGGFN EERK
Sbjct:    1 MDMSNYSKYNSESESGWTNYLNHSSFSEEHFNRKSGKM-DYEGKGATMEEEEEEEEEEEDLSMVSDASSGPPQYYHVEENYQQPYCVNWHSSTSKESKKKG-KEYGRKSQQSSPLDDTASSPVLNYPKNKVNFSENGAVE-NTLDFSPSFSATRTKRKSKLQKHSSFLDGGKQASKEPGGFNGEERK 184          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y9J1|A0A1S2Y9J1_CICAR (uncharacterized protein LOC101498288 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101498288 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.495e-71
Identity = 136/186 (73.12%), Postives = 149/186 (80.11%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDY-QQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATR-TKRKTKFQKH------SFGGKQASEEPGGFNEERK 178
            MDMSN S+YNSESESGWTNY NHSSFSE+HF+ KS   E Y+GK ATMEE++EEEDLSMVSDASSGPPHYHVEEDY QQ YCVNW+ SSS +  KK   E+GRKSQQ SPLDDTASS VLNYPK K++F GNG VE NTLD+ P FSATR  KRKTK QKH      S GGKQASEEPGG NEE +
Sbjct:    1 MDMSN-SQYNSESESGWTNYFNHSSFSEKHFHRKSGKVE-YEGKGATMEEEEEEEDLSMVSDASSGPPHYHVEEDYQQQPYCVNWHSSSSKESKKKV-KEYGRKSQQPSPLDDTASSPVLNYPKMKVNFPGNGAVE-NTLDFPPSFSATRIIKRKTKLQKHSSFLERSLGGKQASEEPGGCNEEER 182          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YB53|A0A1S2YB53_CICAR (uncharacterized protein LOC101498288 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101498288 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 6.271e-71
Identity = 135/187 (72.19%), Postives = 149/187 (79.68%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDY-QQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRT--KRKTKFQKH------SFGGKQASEEPGGFNEERK 178
            MDMSN S+YNSESESGWTNY NHSSFSE+HF+ KS   E Y+GK ATMEE++EEEDLSMVSDASSGPPHYHVEEDY QQ YCVNW+ SSS +  KK   E+GRKSQQ SPLDDTASS VLNYPK K++F GNG VE NTLD+ P FSATR   +RKTK QKH      S GGKQASEEPGG NEE +
Sbjct:    1 MDMSN-SQYNSESESGWTNYFNHSSFSEKHFHRKSGKVE-YEGKGATMEEEEEEEDLSMVSDASSGPPHYHVEEDYQQQPYCVNWHSSSSKESKKKV-KEYGRKSQQPSPLDDTASSPVLNYPKMKVNFPGNGAVE-NTLDFPPSFSATRIIKQRKTKLQKHSSFLERSLGGKQASEEPGGCNEEER 183          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445K4U0|A0A445K4U0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_013748 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 3.292e-67
Identity = 123/190 (64.74%), Postives = 140/190 (73.68%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSS--SKESK----KKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRTKRKTKFQKH------SFGGKQASEEPGGFNEERK 178
            MD+S+ S+YNS  ESGWT YL+HSS SE +F  +    EDY GK AT+EE  EEEDLSM+SDASSGPPHYH  ED  Q+YCVNW  S+S  +KES+    KKV E+G   Q SSPLDDTASS VLN PKKK SFSGNG VE N +D+ PCFS TR KRK+KFQKH      S GGKQASEEPGGF+E RK
Sbjct:    1 MDISS-SQYNSAGESGWTRYLDHSSLSESYFQRRG-GIEDYGGKGATLEE--EEEDLSMISDASSGPPHYH--EDDDQNYCVNWYPSTSHYTKESENNKNKKVKEYGNNQQPSSPLDDTASSPVLNCPKKKASFSGNGAVE-NAVDFPPCFSGTRIKRKSKFQKHFSFFERSLGGKQASEEPGGFDEGRK 183          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|K7KT44|K7KT44_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801392 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 3.292e-67
Identity = 123/190 (64.74%), Postives = 140/190 (73.68%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSS--SKESK----KKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRTKRKTKFQKH------SFGGKQASEEPGGFNEERK 178
            MD+S+ S+YNS  ESGWT YL+HSS SE +F  +    EDY GK AT+EE  EEEDLSM+SDASSGPPHYH  ED  Q+YCVNW  S+S  +KES+    KKV E+G   Q SSPLDDTASS VLN PKKK SFSGNG VE N +D+ PCFS TR KRK+KFQKH      S GGKQASEEPGGF+E RK
Sbjct:    1 MDISS-SQYNSAGESGWTRYLDHSSLSESYFQRRG-GIEDYGGKGATLEE--EEEDLSMISDASSGPPHYH--EDDDQNYCVNWYPSTSHYTKESENNKNKKVKEYGNNQQPSSPLDDTASSPVLNCPKKKASFSGNGAVE-NAVDFPPCFSGTRIKRKSKFQKHFSFFERSLGGKQASEEPGGFDEGRK 183          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SEF0|A0A0B2SEF0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_031364 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.601e-63
Identity = 120/196 (61.22%), Postives = 138/196 (70.41%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSS--SKESK----KKVNEHGRKSQQSSPLDDTASSHVLNYPKKK------ISFSGNGVVENNTLDYSPCFSATRTKRKTKFQKH------SFGGKQASEEPGGFNEERK 178
            MD+S+ S+YNS  ESGWT YL+HSS SE +F  +    EDY GK AT+EE  EEEDLSM+SDASSGPPHYH  ED  Q+YCVNW  S+S  +KES+    KKV E+G   Q SSPLDDTASS VLN PK        + FSGNG VE N +D+ PCFS TR KRK+KFQKH      S GGKQASEEPGGF+E RK
Sbjct:    1 MDISS-SQYNSAGESGWTRYLDHSSLSESYFQRRG-GIEDYGGKGATLEE--EEEDLSMISDASSGPPHYH--EDDDQNYCVNWYPSTSHYTKESENNKNKKVKEYGNNQQPSSPLDDTASSPVLNCPKASQNAIVIVIFSGNGAVE-NAVDFPPCFSGTRIKRKSKFQKHFSFFERSLGGKQASEEPGGFDEGRK 189          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7XRL6|A0A3Q7XRL6_CICAR (uncharacterized protein LOC101498288 isoform X3 OS=Cicer arietinum OX=3827 GN=LOC101498288 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.081e-52
Identity = 105/148 (70.95%), Postives = 117/148 (79.05%), Query Frame = 0
Query:   40 DYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQ-SYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRT--KRKTKFQKH------SFGGKQASEEPGGFNEERK 178
            +Y+GK ATMEE++EEEDLSMVSDASSGPPHYHVEEDYQQ  YCVNW+ SSS +  KK   E+GRKSQQ SPLDDTASS VLNYPK K++F GNG VE NTLD+ P FSATR   +RKTK QKH      S GGKQASEEPGG NEE +
Sbjct:    8 EYEGKGATMEEEEEEEDLSMVSDASSGPPHYHVEEDYQQQPYCVNWHSSSSKESKKKV-KEYGRKSQQPSPLDDTASSPVLNYPKMKVNFPGNGAVE-NTLDFPPSFSATRIIKQRKTKLQKHSSFLERSLGGKQASEEPGGCNEEER 153          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|A0A072V2F1|A0A072V2F1_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=25489977 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.042e-52
Identity = 108/148 (72.97%), Postives = 122/148 (82.43%), Query Frame = 0
Query:   40 DYDGKRATMEEKDEEE----DLSMVSDASSGPP-HYHVEEDYQQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRTKRKTKFQKHSF---GGKQASEEPGGFN-EERK 178
            DY+GK ATMEE++EEE    DLSMVSDASSGPP +YHVEE+YQQ YCVNW+ S+S +  KK   E+GRKSQQSSPLDDTASS VLNYPK K++FS NG VE NTLD+SP FSATRTKRK+K QKHS    GGKQAS+EPGGFN EERK
Sbjct:    2 DYEGKGATMEEEEEEEEEEEDLSMVSDASSGPPQYYHVEENYQQPYCVNWHSSTSKESKKKG-KEYGRKSQQSSPLDDTASSPVLNYPKNKVNFSENGAVE-NTLDFSPSFSATRTKRKSKLQKHSSFLDGGKQASKEPGGFNGEERK 147          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Match: tr|I1K875|I1K875_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801392 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.395e-51
Identity = 100/157 (63.69%), Postives = 115/157 (73.25%), Query Frame = 0
Query:    1 MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSS--SKESK----KKVNEHGRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRTK 151
            MD+S+ S+YNS  ESGWT YL+HSS SE +F  +    EDY GK AT+EE  EEEDLSM+SDASSGPPHYH  ED  Q+YCVNW  S+S  +KES+    KKV E+G   Q SSPLDDTASS VLN PKKK SFSGNG VE N +D+ PCFS TR K
Sbjct:    1 MDISS-SQYNSAGESGWTRYLDHSSLSESYFQRRG-GIEDYGGKGATLEE--EEEDLSMISDASSGPPHYH--EDDDQNYCVNWYPSTSHYTKESENNKNKKVKEYGNNQQPSSPLDDTASSPVLNCPKKKASFSGNGAVE-NAVDFPPCFSGTRIK 150          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8L9K4|SOFL5_ARATH (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.677e-12
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 0
Query:   11 SESESGWTNYLNHS-------SFSEEH-FNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYP-KKKISFSGNGVVEN---NTLDYSPCFSATRTKRKTKFQKH 159
            S  ESGWT YL+ S        F + + F+S+    + +D      EE++EE+DLSM+SDASSGP +   EED  +   +        +E K++  E     + +S LDDTASS + N+P   + S  GN + +    +TLDYS  FSAT+ + KT FQ+ 
Sbjct:    6 SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDASSGPRNIS-EEDSVKKINIVGLKKQCKREKKRRDYE-----KMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQ 160          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. Araport11
Match: AT4G33800.2 (| hypothetical protein | Chr4:16210404-16211307 REVERSE LENGTH=170 | 201606)

HSP 1 Score: 64.3142 bits (155), Expect = 3.762e-13
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 0
Query:   11 SESESGWTNYLNHS-------SFSEEH-FNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYP-KKKISFSGNGVVEN---NTLDYSPCFSATRTKRKTKFQKH 159
            S  ESGWT YL+ S        F + + F+S+    + +D      EE++EE+DLSM+SDASSGP +   EED  +   +        +E K++  E     + +S LDDTASS + N+P   + S  GN + +    +TLDYS  FSAT+ + KT FQ+ 
Sbjct:    6 SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDASSGPRNIS-EEDSVKKINIVGLKKQCKREKKRRDYE-----KMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQ 160          
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. Araport11
Match: AT4G33800.1 (| hypothetical protein | Chr4:16210404-16211307 REVERSE LENGTH=170 | 201606)

HSP 1 Score: 64.3142 bits (155), Expect = 3.762e-13
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 0
Query:   11 SESESGWTNYLNHS-------SFSEEH-FNSKSVDYEDYDGKRATMEEKDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSSSKESKKKVNEHGRKSQQSSPLDDTASSHVLNYP-KKKISFSGNGVVEN---NTLDYSPCFSATRTKRKTKFQKH 159
            S  ESGWT YL+ S        F + + F+S+    + +D      EE++EE+DLSM+SDASSGP +   EED  +   +        +E K++  E     + +S LDDTASS + N+P   + S  GN + +    +TLDYS  FSAT+ + KT FQ+ 
Sbjct:    6 SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISDASSGPRNIS-EEDSVKKINIVGLKKQCKREKKRRDYE-----KMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQFQDKTAFQEQ 160          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3NAW6|A0A2K3NAW6_TRIPR1.738e-7674.48Uncharacterized protein OS=Trifolium pratense OX=5... [more]
tr|A0A396J114|A0A396J114_MEDTR6.174e-7575.40Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A1S2Y9J1|A0A1S2Y9J1_CICAR1.495e-7173.12uncharacterized protein LOC101498288 isoform X2 OS... [more]
tr|A0A1S2YB53|A0A1S2YB53_CICAR6.271e-7172.19uncharacterized protein LOC101498288 isoform X1 OS... [more]
tr|A0A445K4U0|A0A445K4U0_GLYSO3.292e-6764.74Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|K7KT44|K7KT44_SOYBN3.292e-6764.74Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2SEF0|A0A0B2SEF0_GLYSO2.601e-6361.22Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A3Q7XRL6|A0A3Q7XRL6_CICAR1.081e-5270.95uncharacterized protein LOC101498288 isoform X3 OS... [more]
tr|A0A072V2F1|A0A072V2F1_MEDTR4.042e-5272.97Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|I1K875|I1K875_SOYBN1.395e-5163.69Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q8L9K4|SOFL5_ARATH3.677e-1237.27Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g170840.2 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G33800.23.762e-1337.27| hypothetical protein | Chr4:16210404-16211307 RE... [more]
AT4G33800.13.762e-1337.27| hypothetical protein | Chr4:16210404-16211307 RE... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..52
IPR044670SOB-five-Like (SOFL) familyPANTHERPTHR33347OSJNBA0091C07.3 PROTEINcoord: 7..165

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.2g170840.2_vfh_v1 ID=Vfaba.Hedin2.R1.2g170840.2_vfh_v1; Name=Vfaba.Hedin2.R1.2g170840.2; organism=Vicia faba; type=mRNA; length=537bp
ATGGATATGTCAAACTATTCGGAATACAATAGTGAAAGTGAATCTGGTTG
GACAAACTACTTGAACCATTCCTCTTTTTCTGAAGAACATTTCAATAGCA
AAAGTGTGGATTATGAAGATTATGATGGAAAAAGAGCAACAATGGAAGAA
AAGGATGAAGAAGAAGATTTATCCATGGTTTCTGACGCTTCTTCTGGACC
TCCACACTATCATGTAGAGGAAGATTATCAACAAAGCTATTGTGTAAATT
GGAATGATTCTTCAAGTTCTAAAGAATCCAAAAAGAAGGTCAATGAACAT
GGTAGAAAAAGTCAACAATCTTCACCTCTTGATGATACTGCTAGCTCCCA
TGTTCTTAACTATCCCAAGAAGAAAATCAGTTTCTCTGGGAATGGAGTAG
TGGAGAATAACACACTTGATTATTCCCCTTGTTTCTCTGCAACAAGAACA
AAGAGAAAGACTAAATTCCAGAAGCATTCTTTTGGTGGAAAACAAGCTTC
AGAGGAACCAGGTGGTTTTAATGAAGAAAGGAAATGA
back to top

protein sequence of Vfaba.Hedin2.R1.2g170840.2_vfh_v1

>Vfaba.Hedin2.R1.2g170840.2_vfh_v1 ID=Vfaba.Hedin2.R1.2g170840.2_vfh_v1; Name=Vfaba.Hedin2.R1.2g170840.2_vfh_v1; organism=Vicia faba; type=polypeptide; length=178bp
MDMSNYSEYNSESESGWTNYLNHSSFSEEHFNSKSVDYEDYDGKRATMEE
KDEEEDLSMVSDASSGPPHYHVEEDYQQSYCVNWNDSSSSKESKKKVNEH
GRKSQQSSPLDDTASSHVLNYPKKKISFSGNGVVENNTLDYSPCFSATRT
KRKTKFQKHSFGGKQASEEPGGFNEERK
back to top

mRNA from alignment at chr2:1069540340..1069541106+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.2g170840.2_vfh_v1 ID=Vfaba.Hedin2.R1.2g170840.2_vfh_v1; Name=Vfaba.Hedin2.R1.2g170840.2; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1069540340..1069541106+ (Vicia faba
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044670SOFL
Vocabulary: Biological Process
TermDefinition
GO:0009690cytokinin metabolic process
GO:0009691cytokinin biosynthetic process