Vfaba.Hedin2.R1.2g187840.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y919|A0A1S2Y919_CICAR (psbP domain-containing protein 5, chloroplastic OS=Cicer arietinum OX=3827 GN=LOC101507302 PE=4 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 1.293e-145 Identity = 225/287 (78.40%), Postives = 239/287 (83.28%), Query Frame = 0 Query: 1 MVLHSLCLSPC-----------------------------PSNNNLIFRRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 MV+ SLCLSP S+ IFRRDL+LLGLTSLSLTC P S T AEEE PK+ASFVDEINAYSY+YPV+L SKK VFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPN+SL+ KDKSKWTAK+VADSVLA+KSSLRVTS+ERSAESSVLDAH+DEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYL STAERDGYLYSISASTLSPQWK MGPLF++TVSSFRLVSPTENYVPPFKDPWRFW Sbjct: 1 MVVQSLCLSPSNNLIFRNNNNNTTKVILNQTKSEHRRDFSSSSQTTIFRRDLVLLGLTSLSLTCPPFSVTLAEEE---PKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 284
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|G7JBQ7|G7JBQ7_MEDTR (PsbP domain protein OS=Medicago truncatula OX=3880 GN=11423366 PE=4 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 1.525e-144 Identity = 218/297 (73.40%), Postives = 236/297 (79.46%), Query Frame = 0 Query: 1 MVLHSLCLSPCPSNN--------NLIFRRDLMLLGLTSLS-------------------------------LTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 MVLHSL + CPSNN N IFRR ++L T S TC PIS A EE+QD KMASF+DE+NAYSYLYP+EL SKK VFKWVESRKPERYSSAAPLSPNARLRIVSERVD+FDNLIISVTIGPP+A+LINLKDKSKWTAKDV DSVLADKSSLRVTS +RSAESSVLDAH++EIDGEPYWYYEYLIRKSPN+MSEESGIYRHY+ASTAERDGYLYSISASTLSPQWKKMGPL ++TVSSFRLVSPTENYVPP+KDPWRFW Sbjct: 1 MVLHSLWV--CPSNNPALILPTNNRIFRR--VILNQTKCSSLSDDDKRYYSSSSSRRDFLLLGGGLTSLSLTTCSPISVALAGEEEQDHKMASFLDEVNAYSYLYPLELPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDLFDNLIISVTIGPPSANLINLKDKSKWTAKDVVDSVLADKSSLRVTSVQRSAESSVLDAHSNEIDGEPYWYYEYLIRKSPNSMSEESGIYRHYVASTAERDGYLYSISASTLSPQWKKMGPLLEKTVSSFRLVSPTENYVPPYKDPWRFW 293
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NRS8|A0A2K3NRS8_TRIPR (PsbP domain-containing protein 5 chloroplastic-like OS=Trifolium pratense OX=57577 GN=L195_g002195 PE=4 SV=1) HSP 1 Score: 413.69 bits (1062), Expect = 1.491e-143 Identity = 227/302 (75.17%), Postives = 239/302 (79.14%), Query Frame = 0 Query: 1 MVLHSLCLSPCPSNNNLIF--------------------------------------------RRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 MVL SLCL CPSNN+ + RRDL+LLGLTSLSLTCLP S T A EE+ PKMASF+DE NAYSYLYPVEL SK VFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPP+A LINLKDKSKWTAK VADSVLA+KSSLRVTS +RSAESSVLDAH+DEIDG PYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGP+F++TVSSFRLVSPTENYVPPFKDPWRFW Sbjct: 1 MVLQSLCL--CPSNNSALILPNNNLIFRNNNNNSNNSTRLILNQNKSDQKRDFSTSCSSSIKPRRDLLLLGLTSLSLTCLPFSVTLAGEEE--PKMASFLDETNAYSYLYPVELPSKNFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPSAGLINLKDKSKWTAKSVADSVLAEKSSLRVTSAQRSAESSVLDAHSDEIDGVPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPIFEKTVSSFRLVSPTENYVPPFKDPWRFW 298
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NE19|A0A2Z6NE19_TRISU (PsbP domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_306720 PE=4 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 4.560e-140 Identity = 227/315 (72.06%), Postives = 239/315 (75.87%), Query Frame = 0 Query: 1 MVLHSLCLSPCPSNNNLIF----------------------------------------RRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSL-----------------RVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 MVL SLCL CPSNN+ + RRDL+LLGLTSLSLTCLP S A EE+ PKMASF+DE NAYSYLYPVEL SKK VFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPP+A LINLKDKSKWTAK VADSVLA+KSSL RVTS +RSAESSVLDAH+DEIDG PYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGP+F++TVSSFRLVSPTENYVPPFKDPWRFW Sbjct: 1 MVLQSLCL--CPSNNSALILPNNNLIFRNNNNSTRLILNQNKSDQKRDFSTSCSSSLKPRRDLLLLGLTSLSLTCLPFSVALAGEEE--PKMASFLDETNAYSYLYPVELPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPSAGLINLKDKSKWTAKSVADSVLAEKSSLVTRRSFLMDFGANAIPIRVTSAQRSAESSVLDAHSDEIDGVPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPIFEKTVSSFRLVSPTENYVPPFKDPWRFW 311
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A444XY76|A0A444XY76_ARAHY (PsbP domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g089571 PE=4 SV=1) HSP 1 Score: 394.815 bits (1013), Expect = 3.349e-136 Identity = 194/254 (76.38%), Postives = 219/254 (86.22%), Query Frame = 0 Query: 5 SLCLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 S C S NN FRRD +L GLTSLSLT P+SAT AEEE PKMASF DE+NAYSYLYPVEL SKK VFKWVESRKPERYSSAAPLSP+ARLRIVSERVDI DNLIISVTIGPPN+S+I DKSKWTA++VADSVL+DKS+LRVTS++R AESSVLD H+ EIDGEPYWYYEYL+RKSP ++ +S ++RHYLASTAERDGY YSISASTLSPQW+KMGP +++VSSFRL+ PTENYVPP+KDPWRFW Sbjct: 43 SCCALKPTSQNNTFFRRDFVLFGLTSLSLTS-PLSATLAEEE---PKMASFEDELNAYSYLYPVELPSKKFVFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSSIIKTTDKSKWTAREVADSVLSDKSALRVTSSQRLAESSVLDTHSGEIDGEPYWYYEYLVRKSPIKVTPDSSVFRHYLASTAERDGYFYSISASTLSPQWEKMGPFLEKSVSSFRLLKPTENYVPPYKDPWRFW 292
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445C0E1|A0A445C0E1_ARAHY (PsbP domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g040791 PE=4 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 2.484e-135 Identity = 193/254 (75.98%), Postives = 218/254 (85.83%), Query Frame = 0 Query: 5 SLCLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 S C S NN FRRD +L GLTSLSLT P+S T AEEE PKMASF DE+NAYSYLYPVEL SKK VFKWVESRKPERYSSAAPLSP+ARLRIVSERVDI DNLIISVTIGPPN+S+I DKSKWTA++VADSVL+DKS+LRVTS++R AESSVLD H+ EIDGEPYWYYEYL+RKSP ++ +S ++RHYLASTAERDGY YSISASTLSPQW+KMGP +++VSSFRL+ PTENYVPP+KDPWRFW Sbjct: 43 SCCALKPTSQNNTFFRRDFVLFGLTSLSLTS-PLSVTLAEEE---PKMASFEDELNAYSYLYPVELPSKKFVFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSSIIKTTDKSKWTAREVADSVLSDKSALRVTSSQRLAESSVLDTHSGEIDGEPYWYYEYLVRKSPIKVTPDSSVFRHYLASTAERDGYFYSISASTLSPQWEKMGPFLEKSVSSFRLLKPTENYVPPYKDPWRFW 292
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4B6W6|A0A6P4B6W6_ARADU (psbP domain-containing protein 5, chloroplastic OS=Arachis duranensis OX=130453 GN=LOC107463042 PE=4 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 6.240e-134 Identity = 191/254 (75.20%), Postives = 217/254 (85.43%), Query Frame = 0 Query: 5 SLCLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 S C S + FRRD +L GLTSLSLT P+S T AEEE PKMASF DE+NAYSYLYPVEL SKK VFKWVESRKPERYSSAAPLSP+ARLRIVSERVDI DNLIISVTIGPPN+S+I DKSKWTA++VADSVL+DKS+LRVTS++R AESSVLD H+ EIDGEPYWYYEYL+RKSP ++ +S ++RHYLASTAERDGY YSISASTLSPQW+KMGP +++VSSFRL+ PTENYVPP+KDPWRFW Sbjct: 45 SCCALKPTSQTDTFFRRDFVLFGLTSLSLTS-PLSVTLAEEE---PKMASFEDELNAYSYLYPVELPSKKFVFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSSIIKTTDKSKWTAREVADSVLSDKSALRVTSSQRLAESSVLDTHSGEIDGEPYWYYEYLVRKSPIKVTPDSSVFRHYLASTAERDGYFYSISASTLSPQWEKMGPFLEKSVSSFRLLKPTENYVPPYKDPWRFW 294
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|I1JUI8|I1JUI8_SOYBN (PsbP domain-containing protein OS=Glycine max OX=3847 GN=100776365 PE=4 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 7.416e-131 Identity = 188/252 (74.60%), Postives = 217/252 (86.11%), Query Frame = 0 Query: 7 CLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 C + P++ N IFRRDLMLLGLTSLSL +P+S T AEEE PKMASF+DEINAYSY+YPVEL S FKW+ESRKPERYSSAAPLSP+ARLRIVSERVD DN+IISVTIGPPN+S I KDKS+WTAKDVADSVLAD+SSLRVTS++R ESSVL+ H+ EIDGE YWYYEYL+RK+P +++ES YRHYLASTAERDGYLYSISAST+SP+W+K+GP + VSSFRL+SPTENYVPP+KDPWRFW Sbjct: 51 CCALKPTSQNRIFRRDLMLLGLTSLSLP-MPLSVTLAEEE---PKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAVSSFRLLSPTENYVPPYKDPWRFW 298
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2P4P4|A0A0B2P4P4_GLYSO (PsbP domain-containing protein 5, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_009030 PE=4 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 7.416e-131 Identity = 188/252 (74.60%), Postives = 217/252 (86.11%), Query Frame = 0 Query: 7 CLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 C + P++ N IFRRDLMLLGLTSLSL +P+S T AEEE PKMASF+DEINAYSY+YPVEL S FKW+ESRKPERYSSAAPLSP+ARLRIVSERVD DN+IISVTIGPPN+S I KDKS+WTAKDVADSVLAD+SSLRVTS++R ESSVL+ H+ EIDGE YWYYEYL+RK+P +++ES YRHYLASTAERDGYLYSISAST+SP+W+K+GP + VSSFRL+SPTENYVPP+KDPWRFW Sbjct: 51 CCALKPTSQNRIFRRDLMLLGLTSLSLP-MPLSVTLAEEE---PKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAVSSFRLLSPTENYVPPYKDPWRFW 298
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Match: tr|I1K908|I1K908_SOYBN (PsbP domain-containing protein OS=Glycine max OX=3847 GN=100809891 PE=4 SV=1) HSP 1 Score: 380.178 bits (975), Expect = 2.484e-130 Identity = 187/252 (74.21%), Postives = 216/252 (85.71%), Query Frame = 0 Query: 7 CLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISATHAEEEQQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 C + P++ N IFRRDLMLLGLTSLS T +P+S T AEEE PKMASF+DEINAYSY+YPVEL S FKW+ESRKPERYSSAAPLSP+ARLRIVSER+D DN+IISVTIGPPN+S I KDKSKWTAKDVADSVLAD+SSLRVTS++R ESSVL+ H+ EIDGE YWYYEYL+RK+P +++ES YRHYLASTAERDGYLYSISAST+SP W+K+GP + V+SFRL+SPTENYVPP+KDPWRFW Sbjct: 48 CCALKPTSQNRIFRRDLMLLGLTSLSPT-MPLSVTLAEEE---PKMASFLDEINAYSYMYPVELPSDNFTFKWIESRKPERYSSAAPLSPDARLRIVSERLDFIDNVIISVTIGPPNSSYIKSKDKSKWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPLWEKLGPFLDKAVNSFRLLSPTENYVPPYKDPWRFW 295
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P82715|PPD5_ARATH (PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD5 PE=1 SV=3) HSP 1 Score: 338.191 bits (866), Expect = 2.164e-116 Identity = 165/264 (62.50%), Postives = 213/264 (80.68%), Query Frame = 0 Query: 1 MVLHSLCLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISA--THAEEE----QQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 M+ S + S+ + RRDL+L+GL+S LP+S+ THAEE+ ++ KM + VD+INAYSY YP++ S+K+VFKWVESRKPERYSSAAPLSP+ARLRIVSERVD+ DNL+IS++IGPPN+ L + K+K W+AK+VADSVL+DKS+LRVTS++R ESSVLDAH +IDGEPYWYYEYL+RKSP ++E S +YRHY++STAERDGYLY+I+ASTL QW KMGP+ ++ V SFRL+ PT++YVPP+KDPWRFW Sbjct: 35 MIARSGVSTRSISSEKGLSRRDLVLIGLSSPLSMFLPLSSPVTHAEEDVKMSGEELKMGTMVDDINAYSYAYPLDYPSEKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDLTDNLVISISIGPPNSRLTS-KEKKTWSAKEVADSVLSDKSALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRKSPTKIAEASKLYRHYISSTAERDGYLYTINASTLGKQWDKMGPVLERAVGSFRLLPPTDSYVPPYKDPWRFW 297
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. Araport11
Match: AT5G11450.2 (| PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) | Chr5:3654421-3656357 FORWARD LENGTH=315 | 201606) HSP 1 Score: 339.347 bits (869), Expect = 1.382e-117 Identity = 165/264 (62.50%), Postives = 213/264 (80.68%), Query Frame = 0 Query: 1 MVLHSLCLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISA--THAEEE----QQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 M+ S + S+ + RRDL+L+GL+S LP+S+ THAEE+ ++ KM + VD+INAYSY YP++ S+K+VFKWVESRKPERYSSAAPLSP+ARLRIVSERVD+ DNL+IS++IGPPN+ L + K+K W+AK+VADSVL+DKS+LRVTS++R ESSVLDAH +IDGEPYWYYEYL+RKSP ++E S +YRHY++STAERDGYLY+I+ASTL QW KMGP+ ++ V SFRL+ PT++YVPP+KDPWRFW Sbjct: 53 MIARSGVSTRSISSEKGLSRRDLVLIGLSSPLSMFLPLSSPVTHAEEDVKMSGEELKMGTMVDDINAYSYAYPLDYPSEKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDLTDNLVISISIGPPNSRLTS-KEKKTWSAKEVADSVLSDKSALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRKSPTKIAEASKLYRHYISSTAERDGYLYTINASTLGKQWDKMGPVLERAVGSFRLLPPTDSYVPPYKDPWRFW 315
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. Araport11
Match: AT5G11450.1 (| PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) | Chr5:3654475-3656357 FORWARD LENGTH=297 | 201606) HSP 1 Score: 338.191 bits (866), Expect = 2.213e-117 Identity = 165/264 (62.50%), Postives = 213/264 (80.68%), Query Frame = 0 Query: 1 MVLHSLCLSPCPSNNNLIFRRDLMLLGLTSLSLTCLPISA--THAEEE----QQDPKMASFVDEINAYSYLYPVELASKKIVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNASLINLKDKSKWTAKDVADSVLADKSSLRVTSTERSAESSVLDAHTDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLASTAERDGYLYSISASTLSPQWKKMGPLFQQTVSSFRLVSPTENYVPPFKDPWRFW 258 M+ S + S+ + RRDL+L+GL+S LP+S+ THAEE+ ++ KM + VD+INAYSY YP++ S+K+VFKWVESRKPERYSSAAPLSP+ARLRIVSERVD+ DNL+IS++IGPPN+ L + K+K W+AK+VADSVL+DKS+LRVTS++R ESSVLDAH +IDGEPYWYYEYL+RKSP ++E S +YRHY++STAERDGYLY+I+ASTL QW KMGP+ ++ V SFRL+ PT++YVPP+KDPWRFW Sbjct: 35 MIARSGVSTRSISSEKGLSRRDLVLIGLSSPLSMFLPLSSPVTHAEEDVKMSGEELKMGTMVDDINAYSYAYPLDYPSEKLVFKWVESRKPERYSSAAPLSPDARLRIVSERVDLTDNLVISISIGPPNSRLTS-KEKKTWSAKEVADSVLSDKSALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRKSPTKIAEASKLYRHYISSTAERDGYLYTINASTLGKQWDKMGPVLERAVGSFRLLPPTDSYVPPYKDPWRFW 297 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 1
BLAST of Vfaba.Hedin2.R1.2g187840.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.2g187840.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g187840.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g187840.1; organism=Vicia faba; type=mRNA; length=777bpback to top protein sequence of Vfaba.Hedin2.R1.2g187840.1_vfh_v1 >Vfaba.Hedin2.R1.2g187840.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g187840.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g187840.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=258bpback to top mRNA from alignment at chr2:1180869431..1180871570+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.2g187840.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g187840.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g187840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1180869431..1180871570+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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