Vfaba.Hedin2.R1.2g199440.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V439|A0A072V439_MEDTR (Histone deacetylase complex subunit SAP30 Sin3-binding protein OS=Medicago truncatula OX=3880 GN=25490176 PE=3 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 5.923e-149 Identity = 213/231 (92.21%), Postives = 219/231 (94.81%), Query Frame = 0 Query: 1 MLQAMESSVNNGG--FSHLQSCGG---DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 M++AMESSVN GG +HLQS GG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNV WNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGS KVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQL+DVVQRHFMSQ +DELQVIKGFVNAAKR+KTVCK Sbjct: 1 MIEAMESSVNGGGGFATHLQSFGGGGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQLQMDELQVIKGFVNAAKRIKTVCK 231
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445K4B2|A0A445K4B2_GLYSO (SAP30_Sin3_bdg domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_013626 PE=3 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 7.775e-148 Identity = 208/226 (92.04%), Postives = 217/226 (96.02%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGF+HLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+PWNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDSQSKGSV+MP+GS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFTHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSQSKGSVSMPNGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0JBD7|A0A0R0JBD7_SOYBN (SAP30_Sin3_bdg domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_06G034100 PE=3 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 7.775e-148 Identity = 208/226 (92.04%), Postives = 217/226 (96.02%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGF+HLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+PWNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDSQSKGSV+MP+GS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFTHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSQSKGSVSMPNGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TBZ8|A0A151TBZ8_CAJCA (SAP30_Sin3_bdg domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_019167 PE=3 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 1.316e-147 Identity = 208/226 (92.04%), Postives = 216/226 (95.58%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKT+SRSFSGDSQSKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENIQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTISRSFSGDSQSKGSVSMPHGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NUC7|A0A4D6NUC7_VIGUN (Histone deacetylase complex subunit SAP30 OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3609 PE=3 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 3.494e-147 Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDS SKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+D+VQRHFMSQQI DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQQI-DELQVIVGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U897|A0A1S3U897_VIGRR (uncharacterized protein LOC106762728 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106762728 PE=3 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 3.494e-147 Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDS SKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+D+VQRHFMSQQI DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQQI-DELQVIVGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y9M0|A0A1S2Y9M0_CICAR (uncharacterized protein LOC101510485 OS=Cicer arietinum OX=3827 GN=LOC101510485 PE=3 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 4.817e-147 Identity = 211/227 (92.95%), Postives = 218/227 (96.04%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLK-TVCK 226 +++AMESSVN GGFSHLQS GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNV WNGSD+ASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQL+DVVQRHFMSQQ LDELQVI GFV AAKRLK T+CK Sbjct: 2 LIEAMESSVN-GGFSHLQS--GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDLASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQQ-LDELQVIVGFVKAAKRLKTTMCK 224
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RBL7|A0A151RBL7_CAJCA (SAP30_Sin3_bdg domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_038783 PE=3 SV=1) HSP 1 Score: 417.927 bits (1073), Expect = 5.478e-147 Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDSQSKGSV+MPHGS VDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRALGSSHKTMSRSFSGDSQSKGSVSMPHGSTMVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIMGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445K470|A0A445K470_GLYSO (SAP30_Sin3_bdg domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_013626 PE=3 SV=1) HSP 1 Score: 417.927 bits (1073), Expect = 6.318e-147 Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGF+HLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+PWNGSDMASDDT K HK RHRMHR+LGS HKTMSRSFSGDSQSKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFTHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTQKFHKPRHRMHRTLGSSHKTMSRSFSGDSQSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|V7ATC3|V7ATC3_PHAVU (SAP30_Sin3_bdg domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G056200g PE=3 SV=1) HSP 1 Score: 416.387 bits (1069), Expect = 2.021e-146 Identity = 207/226 (91.59%), Postives = 214/226 (94.69%), Query Frame = 0 Query: 1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDS SKGSV+MPHGS KVDLSKLEM ALWRYWRHFNLVD VPNPSKEQL+D+VQRHFMSQQI DELQVI GFV AAKRLKTVCK Sbjct: 1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMTALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQQI-DELQVIVGFVQAAKRLKTVCK 223
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G19330.2 (| histone deacetylase complex subunit | Chr1:6680824-6683290 REVERSE LENGTH=242 | 201606) HSP 1 Score: 320.087 bits (819), Expect = 1.416e-111 Identity = 176/228 (77.19%), Postives = 191/228 (83.77%), Query Frame = 0 Query: 1 MLQAMESS-VNNGGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+A++SS V NGGF +QS GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDDDL+F+N NGSDM S+DT K HKS+ R RS S HKTMSRS S DSQSK S P +MKVDLSKLEM AL YWRHFNLVD +PNPSKEQL+D+VQRHFMSQQ +DELQVI GFV AAKR+K CK Sbjct: 1 MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMTSEDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQ-MDELQVIVGFVQAAKRMKKACK 227
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G19330.1 (| histone deacetylase complex subunit | Chr1:6680824-6683290 REVERSE LENGTH=247 | 201606) HSP 1 Score: 315.849 bits (808), Expect = 8.947e-110 Identity = 177/233 (75.97%), Postives = 192/233 (82.40%), Query Frame = 0 Query: 1 MLQAMESS-VNNGGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDM-----ASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+A++SS V NGGF +QS GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDDDL+F+N NGSDM AS+DT K HKS+ R RS S HKTMSRS S DSQSK S P +MKVDLSKLEM AL YWRHFNLVD +PNPSKEQL+D+VQRHFMSQQ +DELQVI GFV AAKR+K CK Sbjct: 1 MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQ-MDELQVIVGFVQAAKRMKKACK 232
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G19330.3 (| histone deacetylase complex subunit | Chr1:6680824-6683290 REVERSE LENGTH=248 | 201606) HSP 1 Score: 312.768 bits (800), Expect = 1.559e-108 Identity = 177/234 (75.64%), Postives = 191/234 (81.62%), Query Frame = 0 Query: 1 MLQAMESS-VNNGGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDM-----ASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGS-VTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 ML+A++SS V NGGF +QS GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDDDL+F+N NGSDM AS+DT K HKS+ R RS S HKTMSRS S DSQSK S T P KVDLSKLEM AL YWRHFNLVD +PNPSKEQL+D+VQRHFMSQQ +DELQVI GFV AAKR+K CK Sbjct: 1 MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLNYWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQ-MDELQVIVGFVQAAKRMKKACK 233
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G75060.1 (| histone deacetylase complex subunit | Chr1:28181481-28183285 REVERSE LENGTH=242 | 201606) HSP 1 Score: 307.375 bits (786), Expect = 1.374e-106 Identity = 159/218 (72.94%), Postives = 177/218 (81.19%), Query Frame = 0 Query: 12 GGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFD-NVPWN-GSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 GGFS LQSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED+DLE D + WN SDM ++DT K HKS+ R HRS K + R S DS SK S P +MKVDL+KL+MAAL RYWRHFNLVD +PNP+KEQL+D++QRHFMSQQ +DELQVI GFV AA +K C+ Sbjct: 17 GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTKEQLIDIIQRHFMSQQ-MDELQVIVGFVQAATGMKKACQ 233
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G75060.2 (| histone deacetylase complex subunit | Chr1:28181481-28183285 REVERSE LENGTH=241 | 201606) HSP 1 Score: 300.827 bits (769), Expect = 5.168e-104 Identity = 158/218 (72.48%), Postives = 176/218 (80.73%), Query Frame = 0 Query: 12 GGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFD-NVPWN-GSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226 GGFS LQSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED+DLE D + WN SDM ++DT K HKS+ R HRS K + R S DS SK S P +M VDL+KL+MAAL RYWRHFNLVD +PNP+KEQL+D++QRHFMSQQ +DELQVI GFV AA +K C+ Sbjct: 17 GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSSRLSQKALYREVSCDSHSKISSITPRLNM-VDLTKLDMAALLRYWRHFNLVDALPNPTKEQLIDIIQRHFMSQQ-MDELQVIVGFVQAATGMKKACQ 232
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G75060.3 (| histone deacetylase complex subunit | Chr1:28181792-28183285 REVERSE LENGTH=197 | 201606) HSP 1 Score: 242.662 bits (618), Expect = 1.207e-81 Identity = 139/200 (69.50%), Postives = 153/200 (76.50%), Query Frame = 0 Query: 1 MLQAM--ESSVNNGG---FSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFD-NVPWN-GSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLL 192 ML+A +SS+ NGG FS LQSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED+DLE D + WN SDM ++DT K HKS+ R HRS K + R S DS SK S P +MKVDL+KL+MAAL RYWRHFNLV SKE +L Sbjct: 1 MLEAPVNKSSILNGGGGGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVS-----SKETIL 195 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 6
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.2g199440.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g199440.1; organism=Vicia faba; type=mRNA; length=681bpback to top protein sequence of Vfaba.Hedin2.R1.2g199440.1_vfh_v1 >Vfaba.Hedin2.R1.2g199440.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=226bpback to top mRNA from alignment at chr2:1272939863..1272942299- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.2g199440.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g199440.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1272939863..1272942299- (Vicia fababack to top |