Vfaba.Hedin2.R1.2g199440.1

Transcript Overview
NameVfaba.Hedin2.R1.2g199440.1
Unique NameVfaba.Hedin2.R1.2g199440.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length681
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:1272939863..1272942299 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR232Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR251Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL037Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL727Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL275Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL403Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL1005Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL1091Cajanus cajan Asha genome v1.0Cajanus cajan
pvvfhL022Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL339Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL489Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL262Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL803Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL471Pisum sativum Cameor genome v1aPisum sativum
psvfhL505Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR119Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL144Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL208Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR278Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR289Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvfhL0097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL559Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL571Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0367Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0471Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0884Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR221Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR250Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR285Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR229Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR254Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR278Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR281Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL225Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL354Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL576Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL744Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL795Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL231Cicer arietinum
carvfhL327Cicer arietinum
ccavfhL476Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL551Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL605Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR289Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR308Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR220Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR288Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL251Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL334Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR237Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR261Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR280Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL021Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL786Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR260Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR271Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_019167Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_09768Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_04964Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va04G068860.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_14699Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg35217.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg55805.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat05G0056500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan09g022400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_12387Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058866269.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
evm.model.Chr09.1322.1.62113175Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.009G056200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_02G00327.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004500982.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun09g244100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058929330.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat06G0023600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr09.1000370Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun09g244100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_10833Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.02G032000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.02G038200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cr_09359.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_14992.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cc_v2.0_15239.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_14073.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g229320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g162080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g186680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g199440Vfaba.Hedin2.R1.2g199440_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-exonVfaba.Hedin2.R1.2g199440.1_vfh_v1-exon-chr2_vfh_v1:1272939863..1272939937Vicia fabaexon
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-exonVfaba.Hedin2.R1.2g199440.1_vfh_v1-exon-chr2_vfh_v1:1272940173..1272940241Vicia fabaexon
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-exonVfaba.Hedin2.R1.2g199440.1_vfh_v1-exon-chr2_vfh_v1:1272940328..1272940390Vicia fabaexon
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-exonVfaba.Hedin2.R1.2g199440.1_vfh_v1-exon-chr2_vfh_v1:1272940522..1272940661Vicia fabaexon
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-exonVfaba.Hedin2.R1.2g199440.1_vfh_v1-exon-chr2_vfh_v1:1272941091..1272941217Vicia fabaexon
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-exonVfaba.Hedin2.R1.2g199440.1_vfh_v1-exon-chr2_vfh_v1:1272942093..1272942299Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-cdsVfaba.Hedin2.R1.2g199440.1_vfh_v1-cds-chr2_vfh_v1:1272939863..1272939937Vicia fabaCDS
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-cdsVfaba.Hedin2.R1.2g199440.1_vfh_v1-cds-chr2_vfh_v1:1272940173..1272940241Vicia fabaCDS
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-cdsVfaba.Hedin2.R1.2g199440.1_vfh_v1-cds-chr2_vfh_v1:1272940328..1272940390Vicia fabaCDS
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-cdsVfaba.Hedin2.R1.2g199440.1_vfh_v1-cds-chr2_vfh_v1:1272940522..1272940661Vicia fabaCDS
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-cdsVfaba.Hedin2.R1.2g199440.1_vfh_v1-cds-chr2_vfh_v1:1272941091..1272941217Vicia fabaCDS
Vfaba.Hedin2.R1.2g199440.1_vfh_v1-cdsVfaba.Hedin2.R1.2g199440.1_vfh_v1-cds-chr2_vfh_v1:1272942093..1272942299Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g199440.1_vfh_v1Vfaba.Hedin2.R1.2g199440.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.2g199440.1_vfh_v1Vfaba.Hedin2.R1.2g199440.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V439|A0A072V439_MEDTR (Histone deacetylase complex subunit SAP30 Sin3-binding protein OS=Medicago truncatula OX=3880 GN=25490176 PE=3 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 5.923e-149
Identity = 213/231 (92.21%), Postives = 219/231 (94.81%), Query Frame = 0
Query:    1 MLQAMESSVNNGG--FSHLQSCGG---DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            M++AMESSVN GG   +HLQS GG   DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNV WNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGS KVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQL+DVVQRHFMSQ  +DELQVIKGFVNAAKR+KTVCK
Sbjct:    1 MIEAMESSVNGGGGFATHLQSFGGGGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQLQMDELQVIKGFVNAAKRIKTVCK 231          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445K4B2|A0A445K4B2_GLYSO (SAP30_Sin3_bdg domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_013626 PE=3 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 7.775e-148
Identity = 208/226 (92.04%), Postives = 217/226 (96.02%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGF+HLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+PWNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDSQSKGSV+MP+GS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFTHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSQSKGSVSMPNGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0JBD7|A0A0R0JBD7_SOYBN (SAP30_Sin3_bdg domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_06G034100 PE=3 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 7.775e-148
Identity = 208/226 (92.04%), Postives = 217/226 (96.02%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGF+HLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+PWNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDSQSKGSV+MP+GS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFTHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSQSKGSVSMPNGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TBZ8|A0A151TBZ8_CAJCA (SAP30_Sin3_bdg domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_019167 PE=3 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 1.316e-147
Identity = 208/226 (92.04%), Postives = 216/226 (95.58%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKT+SRSFSGDSQSKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENIQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTISRSFSGDSQSKGSVSMPHGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NUC7|A0A4D6NUC7_VIGUN (Histone deacetylase complex subunit SAP30 OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3609 PE=3 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 3.494e-147
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDS SKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+D+VQRHFMSQQI DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQQI-DELQVIVGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U897|A0A1S3U897_VIGRR (uncharacterized protein LOC106762728 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106762728 PE=3 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 3.494e-147
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDS SKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+D+VQRHFMSQQI DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQQI-DELQVIVGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y9M0|A0A1S2Y9M0_CICAR (uncharacterized protein LOC101510485 OS=Cicer arietinum OX=3827 GN=LOC101510485 PE=3 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 4.817e-147
Identity = 211/227 (92.95%), Postives = 218/227 (96.04%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLK-TVCK 226
            +++AMESSVN GGFSHLQS  GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNV WNGSD+ASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQL+DVVQRHFMSQQ LDELQVI GFV AAKRLK T+CK
Sbjct:    2 LIEAMESSVN-GGFSHLQS--GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDLASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQQ-LDELQVIVGFVKAAKRLKTTMCK 224          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RBL7|A0A151RBL7_CAJCA (SAP30_Sin3_bdg domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_038783 PE=3 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 5.478e-147
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDSQSKGSV+MPHGS  VDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRALGSSHKTMSRSFSGDSQSKGSVSMPHGSTMVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIMGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445K470|A0A445K470_GLYSO (SAP30_Sin3_bdg domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_013626 PE=3 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 6.318e-147
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGF+HLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+PWNGSDMASDDT K HK RHRMHR+LGS HKTMSRSFSGDSQSKGSV+MPHGS KVDLSKLEMAALWRYWRHFNLVD VPNPSKEQL+DVVQRHFMSQQ +DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFTHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTQKFHKPRHRMHRTLGSSHKTMSRSFSGDSQSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQ-MDELQVIVGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Match: tr|V7ATC3|V7ATC3_PHAVU (SAP30_Sin3_bdg domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G056200g PE=3 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 2.021e-146
Identity = 207/226 (91.59%), Postives = 214/226 (94.69%), Query Frame = 0
Query:    1 MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+AMESSVN GGFSHLQSCG DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEF+N+ WNGSDMASDDT KSHKSRHRMHR+LGS HKTMSRSFSGDS SKGSV+MPHGS KVDLSKLEM ALWRYWRHFNLVD VPNPSKEQL+D+VQRHFMSQQI DELQVI GFV AAKRLKTVCK
Sbjct:    1 MLEAMESSVN-GGFSHLQSCG-DSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMTALWRYWRHFNLVDAVPNPSKEQLVDIVQRHFMSQQI-DELQVIVGFVQAAKRLKTVCK 223          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G19330.2 (| histone deacetylase complex subunit | Chr1:6680824-6683290 REVERSE LENGTH=242 | 201606)

HSP 1 Score: 320.087 bits (819), Expect = 1.416e-111
Identity = 176/228 (77.19%), Postives = 191/228 (83.77%), Query Frame = 0
Query:    1 MLQAMESS-VNNGGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+A++SS V NGGF  +QS  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDDDL+F+N   NGSDM S+DT K HKS+ R  RS  S HKTMSRS S DSQSK S   P  +MKVDLSKLEM AL  YWRHFNLVD +PNPSKEQL+D+VQRHFMSQQ +DELQVI GFV AAKR+K  CK
Sbjct:    1 MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMTSEDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQ-MDELQVIVGFVQAAKRMKKACK 227          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G19330.1 (| histone deacetylase complex subunit | Chr1:6680824-6683290 REVERSE LENGTH=247 | 201606)

HSP 1 Score: 315.849 bits (808), Expect = 8.947e-110
Identity = 177/233 (75.97%), Postives = 192/233 (82.40%), Query Frame = 0
Query:    1 MLQAMESS-VNNGGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDM-----ASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+A++SS V NGGF  +QS  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDDDL+F+N   NGSDM     AS+DT K HKS+ R  RS  S HKTMSRS S DSQSK S   P  +MKVDLSKLEM AL  YWRHFNLVD +PNPSKEQL+D+VQRHFMSQQ +DELQVI GFV AAKR+K  CK
Sbjct:    1 MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMKVDLSKLEMPALLNYWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQ-MDELQVIVGFVQAAKRMKKACK 232          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G19330.3 (| histone deacetylase complex subunit | Chr1:6680824-6683290 REVERSE LENGTH=248 | 201606)

HSP 1 Score: 312.768 bits (800), Expect = 1.559e-108
Identity = 177/234 (75.64%), Postives = 191/234 (81.62%), Query Frame = 0
Query:    1 MLQAMESS-VNNGGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVPWNGSDM-----ASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGS-VTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            ML+A++SS V NGGF  +QS  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDDDL+F+N   NGSDM     AS+DT K HKS+ R  RS  S HKTMSRS S DSQSK S  T P    KVDLSKLEM AL  YWRHFNLVD +PNPSKEQL+D+VQRHFMSQQ +DELQVI GFV AAKR+K  CK
Sbjct:    1 MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLNYWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQ-MDELQVIVGFVQAAKRMKKACK 233          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G75060.1 (| histone deacetylase complex subunit | Chr1:28181481-28183285 REVERSE LENGTH=242 | 201606)

HSP 1 Score: 307.375 bits (786), Expect = 1.374e-106
Identity = 159/218 (72.94%), Postives = 177/218 (81.19%), Query Frame = 0
Query:   12 GGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFD-NVPWN-GSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            GGFS LQSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED+DLE D +  WN  SDM ++DT K HKS+ R HRS     K + R  S DS SK S   P  +MKVDL+KL+MAAL RYWRHFNLVD +PNP+KEQL+D++QRHFMSQQ +DELQVI GFV AA  +K  C+
Sbjct:   17 GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTKEQLIDIIQRHFMSQQ-MDELQVIVGFVQAATGMKKACQ 233          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G75060.2 (| histone deacetylase complex subunit | Chr1:28181481-28183285 REVERSE LENGTH=241 | 201606)

HSP 1 Score: 300.827 bits (769), Expect = 5.168e-104
Identity = 158/218 (72.48%), Postives = 176/218 (80.73%), Query Frame = 0
Query:   12 GGFSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFD-NVPWN-GSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFMSQQILDELQVIKGFVNAAKRLKTVCK 226
            GGFS LQSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED+DLE D +  WN  SDM ++DT K HKS+ R HRS     K + R  S DS SK S   P  +M VDL+KL+MAAL RYWRHFNLVD +PNP+KEQL+D++QRHFMSQQ +DELQVI GFV AA  +K  C+
Sbjct:   17 GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSSRLSQKALYREVSCDSHSKISSITPRLNM-VDLTKLDMAALLRYWRHFNLVDALPNPTKEQLIDIIQRHFMSQQ-MDELQVIVGFVQAATGMKKACQ 232          
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Match: AT1G75060.3 (| histone deacetylase complex subunit | Chr1:28181792-28183285 REVERSE LENGTH=197 | 201606)

HSP 1 Score: 242.662 bits (618), Expect = 1.207e-81
Identity = 139/200 (69.50%), Postives = 153/200 (76.50%), Query Frame = 0
Query:    1 MLQAM--ESSVNNGG---FSHLQSCGGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFD-NVPWN-GSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLL 192
            ML+A   +SS+ NGG   FS LQSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEED+DLE D +  WN  SDM ++DT K HKS+ R HRS     K + R  S DS SK S   P  +MKVDL+KL+MAAL RYWRHFNLV      SKE +L
Sbjct:    1 MLEAPVNKSSILNGGGGGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVS-----SKETIL 195          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A072V439|A0A072V439_MEDTR5.923e-14992.21Histone deacetylase complex subunit SAP30 Sin3-bin... [more]
tr|A0A445K4B2|A0A445K4B2_GLYSO7.775e-14892.04SAP30_Sin3_bdg domain-containing protein OS=Glycin... [more]
tr|A0A0R0JBD7|A0A0R0JBD7_SOYBN7.775e-14892.04SAP30_Sin3_bdg domain-containing protein OS=Glycin... [more]
tr|A0A151TBZ8|A0A151TBZ8_CAJCA1.316e-14792.04SAP30_Sin3_bdg domain-containing protein OS=Cajanu... [more]
tr|A0A4D6NUC7|A0A4D6NUC7_VIGUN3.494e-14792.04Histone deacetylase complex subunit SAP30 OS=Vigna... [more]
tr|A0A1S3U897|A0A1S3U897_VIGRR3.494e-14792.04uncharacterized protein LOC106762728 isoform X1 OS... [more]
tr|A0A1S2Y9M0|A0A1S2Y9M0_CICAR4.817e-14792.95uncharacterized protein LOC101510485 OS=Cicer arie... [more]
tr|A0A151RBL7|A0A151RBL7_CAJCA5.478e-14792.04SAP30_Sin3_bdg domain-containing protein OS=Cajanu... [more]
tr|A0A445K470|A0A445K470_GLYSO6.318e-14791.59SAP30_Sin3_bdg domain-containing protein OS=Glycin... [more]
tr|V7ATC3|V7ATC3_PHAVU2.021e-14691.59SAP30_Sin3_bdg domain-containing protein OS=Phaseo... [more]
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BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.2g199440.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 6
Match NameE-valueIdentityDescription
AT1G19330.21.416e-11177.19| histone deacetylase complex subunit | Chr1:66808... [more]
AT1G19330.18.947e-11075.97| histone deacetylase complex subunit | Chr1:66808... [more]
AT1G19330.31.559e-10875.64| histone deacetylase complex subunit | Chr1:66808... [more]
AT1G75060.11.374e-10672.94| histone deacetylase complex subunit | Chr1:28181... [more]
AT1G75060.25.168e-10472.48| histone deacetylase complex subunit | Chr1:28181... [more]
AT1G75060.31.207e-8169.50| histone deacetylase complex subunit | Chr1:28181... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038291SAP30, C-terminal domain superfamilyGENE3D6.10.160.20coord: 140..226
e-value: 6.9E-26
score: 91.9
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domainPFAMPF13867SAP30_Sin3_bdgcoord: 165..219
e-value: 1.8E-21
score: 76.2
IPR024145Histone deacetylase complex subunit SAP30/SAP30-likePANTHERPTHR13286SAP30coord: 23..223

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.2g199440.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g199440.1; organism=Vicia faba; type=mRNA; length=681bp
ATGCTTCAAGCAATGGAAAGTTCAGTGAATAATGGTGGATTCTCTCATTT
GCAAAGCTGTGGTGGTGATAGTAGTGAAGAAGAACTATCGGTGCTACCTC
GCCATACCAAAGTGGTGGTCACCGGAAACAACCGTACCAAATCGGTGCTT
GTTGGTCTTCAAGGTGTTGTTAAGAAAGCCGTTGGATTAGGTGGATGGCA
TTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGCTACAAAGGAATGCTC
TAAGTGTGATTGAAGCACCAACTGGTAATGAAGAAGATGATGACCTTGAA
TTTGACAATGTACCATGGAATGGATCAGATATGGCATCGGACGACACACA
CAAGTCTCACAAATCGAGGCACAGAATGCATAGATCATTGGGATCATGTC
ACAAGACAATGAGTAGGTCCTTCTCTGGTGATTCACAGTCTAAGGGGTCC
GTTACTATGCCTCATGGGTCCATGAAAGTTGACTTGAGCAAGCTTGAAAT
GGCTGCATTGTGGCGATATTGGCGACATTTTAATCTTGTTGATGTCGTCC
CAAATCCATCAAAAGAGCAGCTACTAGATGTTGTTCAGAGGCATTTCATG
TCCCAGCAAATCTTGGACGAGTTGCAAGTGATTAAGGGATTCGTCAATGC
TGCGAAGAGGCTCAAGACCGTGTGCAAATGA
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protein sequence of Vfaba.Hedin2.R1.2g199440.1_vfh_v1

>Vfaba.Hedin2.R1.2g199440.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=226bp
MLQAMESSVNNGGFSHLQSCGGDSSEEELSVLPRHTKVVVTGNNRTKSVL
VGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLE
FDNVPWNGSDMASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGS
VTMPHGSMKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLLDVVQRHFM
SQQILDELQVIKGFVNAAKRLKTVCK
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mRNA from alignment at chr2:1272939863..1272942299-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.2g199440.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g199440.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g199440.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1272939863..1272942299- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR038291SAP30_C_sf
IPR025718SAP30_Sin3-bd
IPR024145His_deAcase_SAP30/SAP30L
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding