Vfaba.Hedin2.R1.2g207960.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M026|A0A2Z6M026_TRISU (HTH La-type RNA-binding domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_311910 PE=4 SV=1) HSP 1 Score: 446.817 bits (1148), Expect = 6.298e-152 Identity = 236/361 (65.37%), Postives = 272/361 (75.35%), Query Frame = 0
Query: 100 MGAVSWPALSANS-AKLASDASSS---AEGSTSVPQGPVTLNNPREQAVA--NGSVEPTPPVNHGGANRQQ-MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRPHNNN-IRRNQDSGNINTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVP------------ENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQR 440
MGAVSWPALSA S AK SD SS+ AEGS S+PQGP+T ++PR+QA N + +PTPP+NHG ANRQ+ ++RG GNSS N P FPNSFSNPP V+L+P A PPPYPV+QIPP TF +GV YRNNN W PR PVG YG+ VDEHRN +RRGNYGNRPHNN+ IRRNQD RD H HQHRM SG F RPT PNS ++LGS IRP+VN GF E YYYPT+Q E FGG+P LTHPPPPA+F PVP E PLT I+KQI+YYFSDVNLA DD+L+ NMDEQGWVPI++IANFPRVK LT+N+ELILDSLRTS +VEVHGDK+RRRN+ MR LPS HQ
Sbjct: 1 MGAVSWPALSAKSSAKFTSDPSSAVMVAEGSISIPQGPITSHSPRKQATTTTNANAKPTPPINHGVANRQKPIKRGGGNSS---CNEPAPFPNSFSNPP-HVNLQPSAAPPPYPVVQIPP--TFADGVQSYRNNNSWSPRSPVGGYGLPVDEHRNASRRGNYGNRPHNNSGIRRNQDP----LRDAHAHQHRMHSGGFLRPTLPNSPSYLGSPSIRPFVNTFGFHELYYYPTLQFEQFGGMPVLTHPPPPAMFFPVPETLESPAETTPAETPLTSLILKQIEYYFSDVNLA-NDDFLKFNMDEQGWVPITLIANFPRVKKLTNNIELILDSLRTSKVVEVHGDKMRRRNELMRCLPSAHQH 350
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E7X9|A0A1S3E7X9_CICAR (la-related protein 1C-like OS=Cicer arietinum OX=3827 GN=LOC101500656 PE=4 SV=1) HSP 1 Score: 431.024 bits (1107), Expect = 1.694e-144 Identity = 258/448 (57.59%), Postives = 326/448 (72.77%), Query Frame = 0
Query: 10 SSSTANPAA----NFPRNNLTSPWAQIVRGADSDSVENKSPPESSSTSSLDS---VAPPVVAAGESSNADKESNAVNPRRSAWNNLPNGAVAEVSPVMGAVSWPALSAN-SAKLASDASSSAEGSTSVPQGPVTLNNPREQAVAN----GSVEPTPPVNHG-GANRQQ-MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRPHNN-NIRRNQDSGN-INTRDV-HGHQHRMQSGRFSRPTGPNSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQR 440
S +T N AA N+PR NL SPW ++VRGADS+ + + SPP SSS+SS+DS A +A ++SNADK +NA NP+ +AW N NG +++VSPVMGAVSWPALSA + KL+SD+SS+ +GS S+PQG +T ++P++ A AN +V+PTPP+N G G NRQ+ RRG GN SN GP + P +L+ Q+ PP+PV+QIP TT +G+ YRNNNGW PR PVG Y V+EHR+P+ RGN+GNRPHNN +RRNQ GN +NTRD H HQ RM S F PT PNSA++LG Q +RP+VN GF E+ YYPT+ EPFGG+PFLTHPPPPA+F PV E L +I+ Q+DYYFSD NL KDD+L+ NMDE GWV IS+IANFPRVK+LT+N+ELIL+SLRTS +VEV GDKLRRRN+WMRWLPS H+R
Sbjct: 14 SPTTTNAAAINNPNYPRKNLPSPWIKVVRGADSEPLNHPSPPSSSSSSSIDSGNSDAAAAASAVDNSNADKNNNACNPK-NAWKNPSNG-ISDVSPVMGAVSWPALSAKPTVKLSSDSSSAIDGSISIPQGSITSHSPQKHANANVTVDANVKPTPPINCGVGNNRQRSTRRGGGNGDSNT--GPSN--------PVHSNLQ-QSAAPPFPVLQIP-TTTSPDGIHLYRNNNGWSPRSPVGVYVPPVNEHRSPSHRGNHGNRPHNNYGVRRNQGPGNLVNTRDPPHLHQ-RMHSSGFLTPTLPNSASYLGHQSLRPFVNQAGFHEFCYYPTLPFEPFGGMPFLTHPPPPAMFFPVAETQLINSILNQVDYYFSDANLV-KDDFLRSNMDECGWVSISLIANFPRVKNLTNNIELILESLRTSLVVEVQGDKLRRRNEWMRWLPSAHRR 445
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|G7J5U3|G7J5U3_MEDTR (LA-related protein 6 LA RNA-binding domain protein OS=Medicago truncatula OX=3880 GN=11427406 PE=4 SV=1) HSP 1 Score: 430.254 bits (1105), Expect = 2.389e-144 Identity = 271/474 (57.17%), Postives = 325/474 (68.57%), Query Frame = 0
Query: 8 PDSSSTANPAANFPRNNLTSPWAQIVRGADSDSVE----NKSPPESSSTSSLDSVA--------PPVVAAGESSNADKESNAVN--PRRSAWNNLPNG-AVAEVSPVMGAVSWPALSAN-SAKLASDASSSAEG--STSVPQGPVTLNNPREQAVANGS-VEPTPPVNHGGA--NRQQ--MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRPHNN-NIRRNQDSGN-INTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPI--RPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVPENPLTLA-----IVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQRASSGSVSQV 449
PDSSS NFP NLTSPWA++VRGADS S N PP S S+SS A VV +SNADK +N VN P++ AW N NG VAEVSPVMGAVSWPALSA SAKL SD+ S+ +G S S+ QGPV N+P++QA A + TPP+NH + NRQQ M RG GN+ N PG N+ SNPP QV+ +P PP +PV+QI PNT V+GV Y+NNNGWGPR P G YG+ VDEH + RGNYG+RP NN RRNQD GN +NTRD H QHRM S F RPT PNSA +LGSQP+ RP++NP GF E+YYYPT+Q EPFGG+PFLTHPPPPA+F PV E I+KQIDYYFSDVNL D++L+ NMDE GWVP+S+IANFPRVK+LT+N+ELILDSLR SS+VEV+GDKLR+R +W R+L V+Q+ S S+S V
Sbjct: 7 PDSSS------NFPPKNLTSPWAKVVRGADSSSSSSEPLNNHPPHSVSSSSSLDSANLVAAITAAVVVVDNNNSNADKINNVVNANPKKPAWKNTSNGLVVAEVSPVMGAVSWPALSAKPSAKLTSDSISAVDGAGSISISQGPVISNSPQKQATATAANARHTPPMNHSHSVSNRQQKPMERGGGNN-----NEPGPLSNNLSNPP-QVNHQPSVAPP-FPVLQITPNTFLVDGVQSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPRNNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA-YLGSQPMPMRPFLNPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFSDVNLTN-DEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSVVEVNGDKLRKRKEWARFLSPVYQQVGSSSISSV 462
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392LZA8|A0A392LZA8_9FABA (NAD(P)H-quinone oxidoreductase chain (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001072 PE=4 SV=1) HSP 1 Score: 424.091 bits (1089), Expect = 2.113e-143 Identity = 219/329 (66.57%), Postives = 253/329 (76.90%), Query Frame = 0
Query: 132 GPVTLNNPREQAVA--NGSVEPTPPVNHGGANRQQ-MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPR---GPVGAYGVSVDEHRNPNRRGNYGNRPHNNN-IRRNQDSGNI-NTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVP------------ENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQR 440
GPVT N+P +QA A N + +P PP+NHG A+RQ+ M+RG GNSSSN P FPNSFSNPP V+L+P A PPPYPV+QIP NT F +GV YRNNNGW PR PVG YG+ VDEHRNP+RRGNYGNRPHNN+ IRRN D GNI NTRD HGHQHRM SG F RPT NS ++LGS +RP+VN GF E+YYYPT+Q E FGG+PFLTHPPPPA+F PVP E PLT I+KQI+YYFSDVNLA DD+L+ NMDEQGWVPI++IANFPRVK LT+N+ELILDSLRTS +VEVHGDK+RRRN+ MR LPS HQ
Sbjct: 1 GPVTSNSPHKQATATTNANAKPNPPMNHGAASRQKPMKRGGGNSSSN---EPAPFPNSFSNPP-YVNLQPSAAPPPYPVVQIPSNTAFADGVQSYRNNNGWSPRSPVAPVGGYGLPVDEHRNPSRRGNYGNRPHNNSGIRRNHDPGNIVNTRDAHGHQHRMHSGGFVRPTLHNSPSYLGSPSMRPFVNTFGFHEFYYYPTLQFEQFGGMPFLTHPPPPAMFFPVPETLETPAETTSAETPLTSLILKQIEYYFSDVNLA-NDDFLKFNMDEQGWVPITLIANFPRVKKLTNNIELILDSLRTSKVVEVHGDKMRRRNELMRCLPSAHQH 324
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N2P3|A0A2K3N2P3_TRIPR (ATP synthase subunit a chloroplastic OS=Trifolium pratense OX=57577 GN=L195_g020556 PE=4 SV=1) HSP 1 Score: 402.519 bits (1033), Expect = 2.202e-135 Identity = 209/314 (66.56%), Postives = 241/314 (76.75%), Query Frame = 0
Query: 155 VNHGGANRQQ-MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPR---GPVGAYGVSVDEHRNPNRRGNYGNRPHNNN-IRRNQDSGNI-NTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVP-------------ENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQR--ASSGSVS 447
+NHGG NRQ+ +RG GNSSSN P FPNSFSNPP V+L+P A PPPYPV+QIP NT F +GV YRNNNGW PR PVG YG+ VDEHRNP+RRGNYGNRPHNN+ IRRNQD GNI NTRD H HQHRM SG F RPT NS ++LGS +RP+VN GF E+YYYPT+Q E FGG+PFLTHPPPPA+F+P+P E PLT I+KQI+YYFSDVNLA D +L+ NMDE GWVPI++IANFPRVK LT+N+ELILDSLR+S +VEVHGDK+RRRN+ MR LPS HQ ASSGSVS
Sbjct: 1 MNHGGTNRQKPTKRGGGNSSSN---EPAPFPNSFSNPP-YVNLQPSAAPPPYPVVQIPSNTAFADGVQSYRNNNGWSPRSPVAPVGGYGLPVDEHRNPSRRGNYGNRPHNNSGIRRNQDPGNIVNTRDAHAHQHRMHSGGFVRPTLHNSPSYLGSPSMRPFVNNFGFHEFYYYPTLQFEQFGGMPFLTHPPPPAMFIPIPPETLETPAEATSAETPLTSLILKQIEYYFSDVNLA-NDAFLKFNMDEHGWVPITLIANFPRVKKLTNNIELILDSLRSSKVVEVHGDKMRRRNELMRCLPSAHQHQLASSGSVS 309
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|G7J5C2|G7J5C2_MEDTR (LA-related protein 6 LA RNA-binding domain protein OS=Medicago truncatula OX=3880 GN=MTR_3g114340 PE=4 SV=2) HSP 1 Score: 384.415 bits (986), Expect = 8.043e-127 Identity = 224/372 (60.22%), Postives = 268/372 (72.04%), Query Frame = 0
Query: 87 NLPNG-AVAEVSPVMGAVSWPALSAN-SAKLASDASSSAEGSTSVPQGPVTLNNPREQAVANGSVEP---TPPVNHGGA--NRQQ--MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRPHNN-NIRRNQDSGN-INTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPI--RPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVPENPLTLA-----IVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQR 440
N NG VAEV+PVMGAVSWPALSA SAKL SD S SA GS S+ QGPV N+P++QA A + TPP+NH + NRQQ M RG N+ N PG N+ SNPP Q + +P PP +PV+QIPPNT V+GV Y+NNNGWGPR P G YG+ VDEH + RGNYG+RP NN RRNQD GN +NTRD H QHRM S F RPT PNSA +LGSQP+ RP++NP GF E+YYYPT+Q EPFGG+PFLTHPPPPA+F PV E I+KQIDYYFSDVNL D++L+ NMDE GWVP+S+IANFPRVK+LT+N+ELILDSLR SS+VEV+GDKLR+R +W R+L V+Q+
Sbjct: 25 NTSNGLVVAEVNPVMGAVSWPALSAKPSAKLTSD-SISAVGSISISQGPVISNSPQKQATATATAANARHTPPMNHSHSVSNRQQKPMERGGVNN-----NEPGPLSNNLSNPP-QANHQPSVSPP-FPVLQIPPNTFLVDGVQSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPRNNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA-YLGSQPMPMRPFLNPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFSDVNLTN-DEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSVVEVNGDKLRKRKEWARFLSPVYQQ 383
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396J372|A0A396J372_MEDTR (Putative lupus La protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0143171 PE=4 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 5.742e-123 Identity = 215/358 (60.06%), Postives = 258/358 (72.07%), Query Frame = 0
Query: 100 MGAVSWPALSAN-SAKLASDASSSAEGSTSVPQGPVTLNNPREQAVANGSVEP---TPPVNHGGA--NRQQ--MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRPHNN-NIRRNQDSGN-INTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPI--RPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVPENPLTLA-----IVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQR 440
MGAVSWPALSA SAKL SD S SA GS S+ QGPV N+P++QA A + TPP+NH + NRQQ M RG N+ N PG N+ SNPP Q + +P PP +PV+QIPPNT V+GV Y+NNNGWGPR P G YG+ VDEH + RGNYG+RP NN RRNQD GN +NTRD H QHRM S F RPT PNSA +LGSQP+ RP++NP GF E+YYYPT+Q EPFGG+PFLTHPPPPA+F PV E I+KQIDYYFSDVNL D++L+ NMDE GWVP+S+IANFPRVK+LT+N+ELILDSLR SS+VEV+GDKLR+R +W R+L V+Q+
Sbjct: 1 MGAVSWPALSAKPSAKLTSD-SISAVGSISISQGPVISNSPQKQATATATAANARHTPPMNHSHSVSNRQQKPMERGGVNN-----NEPGPLSNNLSNPP-QANHQPSVSPP-FPVLQIPPNTFLVDGVQSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPRNNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA-YLGSQPMPMRPFLNPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFSDVNLTN-DEFLKSNMDEHGWVPVSLIANFPRVKNLTNNIELILDSLRNSSVVEVNGDKLRKRKEWARFLSPVYQQ 345
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RUU0|A0A151RUU0_CAJCA (La-related protein 1B OS=Cajanus cajan OX=3821 GN=KK1_032110 PE=4 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 1.037e-120 Identity = 241/457 (52.74%), Postives = 313/457 (68.49%), Query Frame = 0
Query: 19 NFPRNNLTSPWAQIVRGADSDSVENKSPPESSSTSSLDSVAPPVVAAGESSNADKESNAVNPRRSAWNNLPNGAVAEVSP--VMGAVSWPALSANS---AKLASDASSSA---EGSTSVPQGPVTLNNPREQAVANGSVEPTPPVNHGGANRQQ-MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVP---------PYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRPHNNNI------RRNQDSGNI-NTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVH---GDKLRRRNDWMRWLPSVHQRASSGSVS 447
NFPR NL SPWAQ+VRGADS+ ++SPP SSS+SSLDSV + G S+ D AV P AW P+ VA+V P VMGAVSWPALS ++ AKL S++S+ +GS + PQGPV ++P++Q G+V+P+P +NHG NRQ+ M+RG NS+ N+ GP N+FS P P + P P +PV+Q+PP +TF +G+P PYRNNN W R P+G + ++EHR+P+RR N G+ P + + RR+QD G+ NTRD H +Q R+ RP PN A+F+G QPIRP+ NP GFPE+YY+PT+Q E FGG+PF TH PPPA+F PV E PLT IV QIDYYFSD NL KD+YL+ NMDEQGWVPI++IA+FPRV+SLTSN++LILDSLRTS++VEV GDKLRRRN+W++WLPS RA +GS+S
Sbjct: 23 NFPRKNLPSPWAQVVRGADSEP-NHQSPPSSSSSSSLDSV----TSNGASAAVDACDAAVKP---AWKR-PSNEVADVGPGPVMGAVSWPALSESTKPAAKLTSESSAKTATDDGSLTTPQGPVISDSPQKQGT--GNVKPSPAMNHGMVNRQRSMKRGGANSN-NVVPGPAQ--NNFSTPSPNLSPPPPPP---FPVLQMPP-STFAHGIPGAPVPIPRDPYRNNN-WDTRPPLGGFMPPMNEHRSPSRRSNAGHHPRDGSYHNSYGNRRDQDRGSYANTRDTHVNQQRIPPRGLMRPPPPNPASFMGPQPIRPFPNPAGFPEFYYFPTLQFESFGGMPFFTHAPPPAMFFPVAETPLTNTIVNQIDYYFSDANLV-KDEYLRSNMDEQGWVPITLIASFPRVRSLTSNIKLILDSLRTSTVVEVQAMEGDKLRRRNEWIKWLPSAQLRAKAGSIS 459
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V3M7|A0A072V3M7_MEDTR (LA-related protein 6 LA RNA-binding domain protein OS=Medicago truncatula OX=3880 GN=11427406 PE=4 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 1.713e-118 Identity = 239/422 (56.64%), Postives = 282/422 (66.82%), Query Frame = 0
Query: 8 PDSSSTANPAANFPRNNLTSPWAQIVRGADSDSVE----NKSPPESSSTSSLDSVA--------PPVVAAGESSNADKESNAVN--PRRSAWNNLPNG-AVAEVSPVMGAVSWPALSAN-SAKLASDASSSAEG--STSVPQGPVTLNNPREQAVANGS-VEPTPPVNHGGA--NRQQ--MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRPHNN-NIRRNQDSGN-INTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPI--RPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVPENPLTLA-----IVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRV 397
PDSSS NFP NLTSPWA++VRGADS S N PP S S+SS A VV +SNADK +N VN P++ AW N NG VAEVSPVMGAVSWPALSA SAKL SD+ S+ +G S S+ QGPV N+P++QA A + TPP+NH + NRQQ M RG GN+ N PG N+ SNPP QV+ +P PP +PV+QI PNT V+GV Y+NNNGWGPR P G YG+ VDEH + RGNYG+RP NN RRNQD GN +NTRD H QHRM S F RPT PNSA +LGSQP+ RP++NP GF E+YYYPT+Q EPFGG+PFLTHPPPPA+F PV E I+KQIDYYFSDVNL D++L+ NMDE GWVP+S+IANFPRV
Sbjct: 7 PDSSS------NFPPKNLTSPWAKVVRGADSSSSSSEPLNNHPPHSVSSSSSLDSANLVAAITAAVVVVDNNNSNADKINNVVNANPKKPAWKNTSNGLVVAEVSPVMGAVSWPALSAKPSAKLTSDSISAVDGAGSISISQGPVISNSPQKQATATAANARHTPPMNHSHSVSNRQQKPMERGGGNN-----NEPGPLSNNLSNPP-QVNHQPSVAPP-FPVLQITPNTFLVDGVQSYKNNNGWGPRSPAGGYGLPVDEH---SHRGNYGHRPRNNYGTRRNQDPGNTMNTRDAHPPQHRMHSEGFLRPTLPNSA-YLGSQPMPMRPFLNPAGFHEFYYYPTLQFEPFGGMPFLTHPPPPAMFFPVAEETPPTTPPTNIILKQIDYYFSDVNLT-NDEFLKSNMDEHGWVPVSLIANFPRV 410
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FK57|A0A371FK57_MUCPR (La-related protein 1C (Fragment) OS=Mucuna pruriens OX=157652 GN=LARP1C PE=4 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 2.263e-117 Identity = 238/471 (50.53%), Postives = 305/471 (64.76%), Query Frame = 0
Query: 9 DSSSTANPAANFPRNNLTSPWAQIVRGADSDSVENKSPPESSSTSSLDSVAPPVVAAGESSNADKESNAVNPRRSAWNNLPNGAVAEVSPVMGAVSWPALSANS---AKLASDASSSA---EGSTSVPQGPVTLNNPREQAVANGSVEPTPPVNHGGANRQQ-MRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVP---------PYRNNNGWGPRGPVGAYGVSVDEHRNPNRRGNYGNRP------HNN-NIRRNQDSGNI-NTRDVHGHQHRMQSGRFSRPTGPNSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPPPAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQRASSGSVSQVDQIAIT 455
DS ++A NF R NL SPWAQ+VRGADS+ P S+S+SSLDSV A D V P W NG +AEV VMGAVSWPALS ++ AKL SD+S+ +GS +V QGPV ++ ++QA G+ + +P +N+G NRQ+ M+RG N +S GPG ++FSNP P + P +PV+Q+PP +TF +G+P PYRNNN W R P G + ++EHR+P+RRGN G+ P HN+ RR+QD G+ NTRD H +Q RM RP PN A+F+G QP+RP+ NP GFPE+YY+PT+Q EPFGG+PF TH PPPA+F PV E PLT IV QIDYYFSD NL KD+YL+ NMDEQGWVPI++IA+FPRV+SLTSN++LILDSLRTS++VEV GDKLRRRNDWM+WLP++ +S D IT
Sbjct: 7 DSPTSAADNPNFSRKNLPSPWAQVVRGADSEPNHPSPPSSSASSSSLDSVNSNSAAV------DTCDATVKP---VWKRPSNG-IAEVGSVMGAVSWPALSESTKPTAKLTSDSSAKTATDDGSPTVLQGPVISDSLQKQAT--GNAKHSPAMNYGMTNRQRSMKRGGANGNSV---GPGPAQSNFSNPSPNLPPPPPP----FPVLQMPP-STFAHGIPGVSVPGPRDPYRNNN-WDTRPPHGGFMPPMNEHRSPSRRGNAGHHPRGDGPYHNSYGNRRDQDRGSYANTRDAHVNQQRMPPRGLMRPPPPNPASFMGPQPMRPFANPAGFPEFYYFPTLQFEPFGGMPFFTHAPPPAMFFPVAETPLTNTIVNQIDYYFSDANLV-KDEYLRSNMDEQGWVPITLIASFPRVRSLTSNIKLILDSLRTSTVVEVQGDKLRRRNDWMKWLPTISPSGTSSKNLAADFEKIT 455
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94K80|LRP1C_ARATH (La-related protein 1C OS=Arabidopsis thaliana OX=3702 GN=LARP1C PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.334e-32 Identity = 137/460 (29.78%), Postives = 206/460 (44.78%), Query Frame = 0
Query: 21 PRNNLTSPWAQIVRGADS-----------DSVENKSPPESSSTSSLDSVAPPVVAAGESSNADKESNAVNPRRSA-----WNNLPNGAVAEVSPVMGAVSWPALSANS-AKLASDASSSAEGSTSVPQGPVTLNN-PREQAVANGSV---------EPTPPVNHGGANRQQMRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEH---RNPNRRGNY----GNRPHNNNIRRNQDSGNIN---TRDVHGHQHRMQSGR----FSRPTGPNSA---TFLGSQPIRPYV-NPTGFPEYYYYPTVQLEPFGGVPFLT-HPPPPAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWL 434
P ++SPW QIVRG S ++++P E ++ S+ + V+ E++ D++S A + +A W NGA +EV PVMGA SWPALS + A +S S + VP ++ P Q +AN SV P P NH + R GA S++ + P S SF+ P ++ PRG G + H NP++R +Y GN ++ RRNQ+ GN N R +G + QS R F R P F+ +QP ++ PT + YYP + P++T P P F + PL + + KQI YYFSD NL D YL+ M+ +G+VP+ V+A F +V LT N++ I+++L+ S VEV GD +R+R++W W+
Sbjct: 37 PSRQVSSPWTQIVRGESEPIAAAAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTV-EAAAGDEKSEASGGQDNAGKKPVWKRPSNGA-SEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTPNHSRQRSFKQRNGASGSANGTVSQP-SAQGSFTELP----------------------------------SHNPSPRGQNQKNGFASQNHGGTENPSQRDSYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTPAFVRHPSPTVQPIPQFMAAQPFPSHIPFPTELAQSSYYPRM--------PYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLIT-DIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWV 450
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8RWR2|LRP1B_ARATH (La-related protein 1B OS=Arabidopsis thaliana OX=3702 GN=LARP1B PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.229e-22 Identity = 75/248 (30.24%), Postives = 123/248 (49.60%), Query Frame = 0
Query: 246 RNPNRRGNYGNRPHNNNI----RRNQDSGN---INTRDVHGHQHRMQSGR---FSRP---TGP-----NSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPP-PAVFV-PVPENPLTL---------AIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWL---------PSVHQRASSGSVSQVDQIAIT 455
RN R N + P + RRN + GN + R+ G +Q R RP GP +SA ++ + + Y P +P+Y + F+ HP P P V P P P+ I+ Q++YYFS NL++ D++L+ M+++GWVP+ VIA F R+ LT+N++ IL++LR+S +VE+ G+ LRRR DW ++L P+ ++ VSQ++ + ++
Sbjct: 210 RNSQRNRNSSSYPRGEGLHHGNRRNYEHGNQSGFSHRNYSGRDMHLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHV-----------FMPHPSPDPMGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSR-DEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAGASNNASLVSQIESMTLS 445
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q940X9|LRP1A_ARATH (La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.752e-21 Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 0
Query: 332 VPFLTHPPPPAV-------FVPVPENP-----------LTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQRASSGSVSQVDQ 451
V +L PPP A+ F P P N L ++KQ++YYFSD NL + D YL MDE+GWVP +IA F RVK++T +V+ I+ +L S+ VEV GD++R+R+ W W+P+ + S+ ++ D+
Sbjct: 240 VYYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENL-ENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDK 376
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q659C4|LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.291e-16 Identity = 41/88 (46.59%), Postives = 65/88 (73.86%), Query Frame = 0
Query: 346 PVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRW 433
PV E L I +QI+YYFS NL ++D +L+ MDEQG++PIS+IA F RV++LT+N+ LIL++L+ S+ VE+ +K+R++ + +W
Sbjct: 209 PVEEALLKEYIKRQIEYYFSVENL-ERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKW 295
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|D5MCN2|LARP1_CAEEL (La-related protein 1 OS=Caenorhabditis elegans OX=6239 GN=larp-1 PE=4 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.323e-14 Identity = 40/97 (41.24%), Postives = 65/97 (67.01%), Query Frame = 0
Query: 331 GVPFLTHPPPPAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRR 427
+PF PP PV ++ L + KQI+YYFS+ NL +KD +L+ M +G++P+++IA+FPRV+SLT + LIL++L+ S+ V++ D L+ R
Sbjct: 558 AIPFAPIYNPPTAPRPVTDDTLKEYVRKQIEYYFSEENL-QKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYSLILEALKDSTKVDMSPDGLQIR 653
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6PKG0|LARP1_HUMAN (La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.562e-14 Identity = 36/87 (41.38%), Postives = 61/87 (70.11%), Query Frame = 0
Query: 347 VPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRW 433
V + L I +QI+YYFS NL ++D +L+ MD G++PI++IA+F RV++LT+++ LI +L+ S +VE+ +K+RRR + +W
Sbjct: 398 VDQELLKDYIKRQIEYYFSVDNL-ERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEPEKW 483
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6ZQ58|LARP1_MOUSE (La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 6.613e-14 Identity = 35/82 (42.68%), Postives = 59/82 (71.95%), Query Frame = 0
Query: 352 LTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRW 433
L I +QI+YYFS NL ++D +L+ MD G++PI++IA+F RV++LT+++ LI +L+ S +VE+ +K+RRR + +W
Sbjct: 378 LKDYIKRQIEYYFSVDNL-ERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVEEKVRRREEPEKW 458
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|J9VT60|LARP1_CRYNH (La RNA-binding domain-containing protein LHP1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=LHP1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.200e-12 Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 0
Query: 350 NPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRN-DWMRWL 434
+PL ++ Q++YYFS NLA D +L+ MD +GW+ I++IA+F R+KSLT ++ + + S+ +EV DK+R + RW+
Sbjct: 710 DPLRFYVLGQVEYYFSMQNLAM-DFFLRQQMDSEGWIDIAMIASFNRIKSLTPETSIVRECMILSNYLEVREDKVRLSGAESHRWV 794
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9VAW5|LARP_DROME (La-related protein 1 OS=Drosophila melanogaster OX=7227 GN=larp PE=1 SV=5) HSP 1 Score: 72.7886 bits (177), Expect = 3.423e-12 Identity = 34/94 (36.17%), Postives = 62/94 (65.96%), Query Frame = 0
Query: 341 PAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEV-HGDKLRRRNDWMRW 433
PA ++ + N + AI KQ++YYFS NL D +L+ MD +G++P+++IA+F RV +LT++V +I+++++ S +E+ G K+R + W
Sbjct: 718 PAAYIELDANSIKEAIKKQVEYYFSVDNLTG-DFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFEGYKVRTKTTPTTW 810
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9P6K0|YLA3_SCHPO (Uncharacterized HTH La-type RNA-binding protein C1527.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1527.03 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.985e-11 Identity = 30/86 (34.88%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 356 IVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGD-------KLRRRNDWMRWL 434
+ Q++YYFS NL K D +L+ +MD++G+VP++ +A+F R+KS ++++ L+ + + S I++V D K+RR+ W W+
Sbjct: 329 LTSQLEYYFSIENLCK-DMFLRKHMDDEGYVPLAFLASFNRIKSFSTDLNLLHAACKASDIIDVAIDLQSPMSIKVRRKETWSPWI 413
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. Araport11
Match: AT4G35890.1 (| winged-helix DNA-binding transcription factor family protein | Chr4:16997433-17000410 FORWARD LENGTH=523 | 201606) HSP 1 Score: 132.88 bits (333), Expect = 1.365e-33 Identity = 137/460 (29.78%), Postives = 206/460 (44.78%), Query Frame = 0
Query: 21 PRNNLTSPWAQIVRGADS-----------DSVENKSPPESSSTSSLDSVAPPVVAAGESSNADKESNAVNPRRSA-----WNNLPNGAVAEVSPVMGAVSWPALSANS-AKLASDASSSAEGSTSVPQGPVTLNN-PREQAVANGSV---------EPTPPVNHGGANRQQMRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEH---RNPNRRGNY----GNRPHNNNIRRNQDSGNIN---TRDVHGHQHRMQSGR----FSRPTGPNSA---TFLGSQPIRPYV-NPTGFPEYYYYPTVQLEPFGGVPFLT-HPPPPAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWL 434
P ++SPW QIVRG S ++++P E ++ S+ + V+ E++ D++S A + +A W NGA +EV PVMGA SWPALS + A +S S + VP ++ P Q +AN SV P P NH + R GA S++ + P S SF+ P ++ PRG G + H NP++R +Y GN ++ RRNQ+ GN N R +G + QS R F R P F+ +QP ++ PT + YYP + P++T P P F + PL + + KQI YYFSD NL D YL+ M+ +G+VP+ V+A F +V LT N++ I+++L+ S VEV GD +R+R++W W+
Sbjct: 37 PSRQVSSPWTQIVRGESEPIAAAAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTV-EAAAGDEKSEASGGQDNAGKKPVWKRPSNGA-SEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTPNHSRQRSFKQRNGASGSANGTVSQP-SAQGSFTELP----------------------------------SHNPSPRGQNQKNGFASQNHGGTENPSQRDSYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTPAFVRHPSPTVQPIPQFMAAQPFPSHIPFPTELAQSSYYPRM--------PYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLIT-DIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWV 450
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. Araport11
Match: AT5G66100.1 (| winged-helix DNA-binding transcription factor family protein | Chr5:26427639-26429772 FORWARD LENGTH=453 | 201606) HSP 1 Score: 102.449 bits (254), Expect = 2.812e-23 Identity = 75/248 (30.24%), Postives = 123/248 (49.60%), Query Frame = 0
Query: 246 RNPNRRGNYGNRPHNNNI----RRNQDSGN---INTRDVHGHQHRMQSGR---FSRP---TGP-----NSATFLGSQPIRPYVNPTGFPEYYYYPTVQLEPFGGVPFLTHPPP-PAVFV-PVPENPLTL---------AIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWL---------PSVHQRASSGSVSQVDQIAIT 455
RN R N + P + RRN + GN + R+ G +Q R RP GP +SA ++ + + Y P +P+Y + F+ HP P P V P P P+ I+ Q++YYFS NL++ D++L+ M+++GWVP+ VIA F R+ LT+N++ IL++LR+S +VE+ G+ LRRR DW ++L P+ ++ VSQ++ + ++
Sbjct: 211 RNSQRNRNSSSYPRGEGLHHGNRRNYEHGNQSGFSHRNYSGRDMHLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHV-----------FMPHPSPDPMGLVGPFPLQPMYFRNFDAILYNKILTQVEYYFSADNLSR-DEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAGASNNASLVSQIESMTLS 446
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. Araport11
Match: AT5G21160.1 (| LA RNA-binding protein | Chr5:7199191-7203879 REVERSE LENGTH=826 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 3.839e-22 Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 0
Query: 332 VPFLTHPPPPAV-------FVPVPENP-----------LTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQRASSGSVSQVDQ 451
V +L PPP A+ F P P N L ++KQ++YYFSD NL + D YL MDE+GWVP +IA F RVK++T +V+ I+ +L S+ VEV GD++R+R+ W W+P+ + S+ ++ D+
Sbjct: 240 VYYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENL-ENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDK 376
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. Araport11
Match: AT5G21160.2 (| LA RNA-binding protein | Chr5:7198817-7203879 REVERSE LENGTH=832 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 3.963e-22 Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 0
Query: 332 VPFLTHPPPPAV-------FVPVPENP-----------LTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQRASSGSVSQVDQ 451
V +L PPP A+ F P P N L ++KQ++YYFSD NL + D YL MDE+GWVP +IA F RVK++T +V+ I+ +L S+ VEV GD++R+R+ W W+P+ + S+ ++ D+
Sbjct: 240 VYYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENL-ENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDK 376
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. Araport11
Match: AT5G21160.3 (| LA RNA-binding protein | Chr5:7198817-7203879 REVERSE LENGTH=833 | 201606) HSP 1 Score: 100.138 bits (248), Expect = 3.966e-22 Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 0
Query: 332 VPFLTHPPPPAV-------FVPVPENP-----------LTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRVKSLTSNVELILDSLRTSSIVEVHGDKLRRRNDWMRWLPSVHQRASSGSVSQVDQ 451
V +L PPP A+ F P P N L ++KQ++YYFSD NL + D YL MDE+GWVP +IA F RVK++T +V+ I+ +L S+ VEV GD++R+R+ W W+P+ + S+ ++ D+
Sbjct: 240 VYYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENL-ENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDK 376
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. Araport11
Match: AT4G35890.2 (| winged-helix DNA-binding transcription factor family protein | Chr4:16997433-16999329 FORWARD LENGTH=414 | 201606) HSP 1 Score: 94.7449 bits (234), Expect = 8.747e-21 Identity = 122/423 (28.84%), Postives = 180/423 (42.55%), Query Frame = 0
Query: 21 PRNNLTSPWAQIVRGADS-----------DSVENKSPPESSSTSSLDSVAPPVVAAGESSNADKESNAVNPRRSA-----WNNLPNGAVAEVSPVMGAVSWPALSANS-AKLASDASSSAEGSTSVPQGPVTLNN-PREQAVANGSV---------EPTPPVNHGGANRQQMRRGAGNSSSNITNGPGSFPNSFSNPPPQVDLRPQAPPPPYPVIQIPPNTTFVNGVPPYRNNNGWGPRGPVGAYGVSVDEH---RNPNRRGNY----GNRPHNNNIRRNQDSGNIN---TRDVHGHQHRMQSGR----FSRPTGPNSA---TFLGSQPIRPYV-NPTGFPEYYYYPTVQLEPFGGVPFLT-HPPPPAVFVPVPENPLTLAIVKQIDYYFSDVNLAKKDDYLQLNMDEQGWVPISVIANFPRV 397
P ++SPW QIVRG S ++++P E ++ S+ + V+ E++ D++S A + +A W NGA +EV PVMGA SWPALS + A +S S + VP ++ P Q +AN SV P P NH + R GA S++ + P S SF+ P ++ PRG G + H NP++R +Y GN ++ RRNQ+ GN N R +G + QS R F R P F+ +QP ++ PT + YYP +P++T P P F + PL + + KQI YYFSD NL D YL+ M+ +G+VP+ V+A F +V
Sbjct: 37 PSRQVSSPWTQIVRGESEPIAAAAAVAGPSSPQSRAPIEPIASVSVAAPTAAVLTV-EAAAGDEKSEASGGQDNAGKKPVWKRPSNGA-SEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLGDVPSSSSASSSVPVTQGIANASVPAPKQAGRANPNPTPNHSRQRSFKQRNGASGSANGTVSQP-SAQGSFTELP----------------------------------SHNPSPRGQNQKNGFASQNHGGTENPSQRDSYRNQNGNHHQSHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRGTPAFVRHPSPTVQPIPQFMAAQPFPSHIPFPTELAQSSYYPR--------MPYMTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDENLI-TDIYLRGFMNNEGFVPLRVVAGFKKV 413 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10
BLAST of Vfaba.Hedin2.R1.2g207960.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 6
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.2g207960.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g207960.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g207960.1; organism=Vicia faba; type=mRNA; length=1368bpback to top protein sequence of Vfaba.Hedin2.R1.2g207960.1_vfh_v1 >Vfaba.Hedin2.R1.2g207960.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g207960.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g207960.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=455bpback to top mRNA from alignment at chr2:1324567285..1324569694- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.2g207960.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g207960.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g207960.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1324567285..1324569694- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
|