Vfaba.Hedin2.R1.3g044760.1

Transcript Overview
NameVfaba.Hedin2.R1.3g044760.1
Unique NameVfaba.Hedin2.R1.3g044760.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length447
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:267419681..267420429 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR282Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR304Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL134Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL386Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL680Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL044Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL200Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL292Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL303Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL516Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0377Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0610Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0643Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0770Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0858Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL065Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL026Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL253Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL158Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL399Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL510Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL638Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL214Pisum sativum Cameor genome v1aPisum sativum
psvfhL560Pisum sativum Cameor genome v1aPisum sativum
psvfhL667Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR176Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvfhR193Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL222Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR319Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR338Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR363Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR371Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR385Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhL341Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhL232Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL393Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL426Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0676Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0765Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0898Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1230Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR343Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR348Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR364Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR434Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR289Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR304Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR348Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR333Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR388Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR420Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL043Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL167Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL247Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL464Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL077Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL362Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL383Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL488Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL688Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL030Cicer arietinum
carvfhL166Cicer arietinum
carvfhL244Cicer arietinum
carvfhL452Cicer arietinum
ccavfhL091Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL214Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL327Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL406Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR416Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR427Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR492Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR519Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR522Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR341Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR464Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL421Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL578Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL652Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL730Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL749Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR430Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR456Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR459Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR492Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL026Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL161Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL478Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL614Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR298Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR313Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR336Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR344Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.3g036120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g044760Vfaba.Hedin2.R1.3g044760_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g044760.1_vfh_v1-exonVfaba.Hedin2.R1.3g044760.1_vfh_v1-exon-chr3_vfh_v1:267419681..267419769Vicia fabaexon
Vfaba.Hedin2.R1.3g044760.1_vfh_v1-exonVfaba.Hedin2.R1.3g044760.1_vfh_v1-exon-chr3_vfh_v1:267420072..267420429Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g044760.1_vfh_v1-cdsVfaba.Hedin2.R1.3g044760.1_vfh_v1-cds-chr3_vfh_v1:267419681..267419769Vicia fabaCDS
Vfaba.Hedin2.R1.3g044760.1_vfh_v1-cdsVfaba.Hedin2.R1.3g044760.1_vfh_v1-cds-chr3_vfh_v1:267420072..267420429Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g044760.1_vfh_v1Vfaba.Hedin2.R1.3g044760.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.3g044760.1_vfh_v1Vfaba.Hedin2.R1.3g044760.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R1S3|A0A0S3R1S3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G220100 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.387e-19
Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     +  KDK+ L +
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKDKQALKS 120          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TLE2|A0A0L9TLE2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g096800 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.387e-19
Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     +  KDK+ L +
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKDKQALKS 120          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0K9PKS7|A0A0K9PKS7_ZOSMR (60S ribosomal protein L34 OS=Zostera marina OX=29655 GN=ZOSMA_20G01160 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.045e-19
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKRNLA 93
            IP+LRPT+Y+RSRLSRN R VNRAYGGVLSG AVRER+IRAFL+EE+   +     + TKDK+  A
Sbjct:   54 IPHLRPTQYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKTKDKQAKA 119          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S4CM46|A0A1S4CM46_TOBAC (60S ribosomal protein L34-like OS=Nicotiana tabacum OX=4097 GN=LOC107820542 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.261e-19
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   30 RIPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            +IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA 
Sbjct:   16 QIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAA 81          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A200RAS8|A0A200RAS8_9MAGN (Ribosomal protein L34Ae OS=Macleaya cordata OX=56857 GN=BVC80_1685g3 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.075e-18
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEESFEDTKDKRNLATHKPRE 99
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+          DK+ L   K +E
Sbjct:   67 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI--------DKKVLKIQKAKE 127          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5J5AGW1|A0A5J5AGW1_9ASTE (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033773 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.339e-18
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKR 90
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     + TK+K+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQ 116          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1U7XFS1|A0A1U7XFS1_NICSY (60S ribosomal protein L34-like OS=Nicotiana sylvestris OX=4096 GN=LOC104233587 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-18
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAS 118          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J6KSN1|A0A1J6KSN1_NICAT (60s ribosomal protein l34 OS=Nicotiana attenuata OX=49451 GN=RPL34_0 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-18
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAS 118          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3XUR7|A0A1S3XUR7_TOBAC (60S ribosomal protein L34-like OS=Nicotiana tabacum OX=4097 GN=LOC107768952 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-18
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAS 118          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P9EF84|A0A6P9EF84_JUGRE (60S ribosomal protein L34 OS=Juglans regia OX=51240 GN=LOC109013174 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.680e-18
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKR 90
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     + TK+K+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQ 116          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40590|RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.410e-21
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKR 90
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     + TK+K+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQ 116          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Match: sp|P41098|RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.469e-21
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA 
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAA 118          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FE65|RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.658e-20
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q42351|RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.364e-20
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP+EY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJW6|RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.775e-19
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP EY+RSRL+RN R VNRAYGGVLSG AVRER++RAFLVEE+  
Sbjct:   54 IPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKI 102          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Match: sp|O42846|RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3401 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 6.375e-10
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP LRP E+  +RLS N + V RAYGG LS  AV++R++RAFL+EE+  
Sbjct:   54 IPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAFLIEEQKI 100          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9URT8|RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3402 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 9.230e-10
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP LRP E+  +RLS N + V RAYGG LS  AV++R++RAFL+EE+  
Sbjct:   54 IPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAFLIEEQKI 100          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. Araport11
Match: AT1G69620.1 (| ribosomal protein L34 | Chr1:26189900-26191081 FORWARD LENGTH=119 | 201606)

HSP 1 Score: 83.9593 bits (206), Expect = 1.696e-21
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. Araport11
Match: AT1G26880.1 (| Ribosomal protein L34e superfamily protein | Chr1:9315640-9316681 REVERSE LENGTH=120 | 201606)

HSP 1 Score: 82.4185 bits (202), Expect = 6.511e-21
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP+EY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. Araport11
Match: AT3G28900.1 (| Ribosomal protein L34e superfamily protein | Chr3:10902864-10904415 REVERSE LENGTH=120 | 201606)

HSP 1 Score: 79.7221 bits (195), Expect = 8.977e-20
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP EY+RSRL+RN R VNRAYGGVLSG AVRER++RAFLVEE+  
Sbjct:   54 IPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKI 102          
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. Araport11
Match: AT1G26880.2 (| Ribosomal protein L34e superfamily protein | Chr1:9315798-9316681 REVERSE LENGTH=96 | 201606)

HSP 1 Score: 66.2402 bits (160), Expect = 7.737e-15
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMI 69
            IP+LRP+EY+RSRLSRN R VNRAYGGVLSG AVRER +
Sbjct:   54 IPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERFV 92          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3R1S3|A0A0S3R1S3_PHAAN3.387e-1965.67Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9TLE2|A0A0L9TLE2_PHAAN3.387e-1965.67Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A0K9PKS7|A0A0K9PKS7_ZOSMR6.045e-1965.1560S ribosomal protein L34 OS=Zostera marina OX=296... [more]
tr|A0A1S4CM46|A0A1S4CM46_TOBAC7.261e-1966.6760S ribosomal protein L34-like OS=Nicotiana tabacu... [more]
tr|A0A200RAS8|A0A200RAS8_9MAGN1.075e-1865.22Ribosomal protein L34Ae OS=Macleaya cordata OX=568... [more]
tr|A0A5J5AGW1|A0A5J5AGW1_9ASTE1.339e-1868.25Uncharacterized protein OS=Nyssa sinensis OX=56137... [more]
tr|A0A1U7XFS1|A0A1U7XFS1_NICSY1.413e-1867.6960S ribosomal protein L34-like OS=Nicotiana sylves... [more]
tr|A0A1J6KSN1|A0A1J6KSN1_NICAT1.413e-1867.6960s ribosomal protein l34 OS=Nicotiana attenuata O... [more]
tr|A0A1S3XUR7|A0A1S3XUR7_TOBAC1.413e-1867.6960S ribosomal protein L34-like OS=Nicotiana tabacu... [more]
tr|A0A6P9EF84|A0A6P9EF84_JUGRE1.680e-1868.2560S ribosomal protein L34 OS=Juglans regia OX=5124... [more]
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BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
sp|P40590|RL34_PEA5.410e-2168.2560S ribosomal protein L34 OS=Pisum sativum OX=3888... [more]
sp|P41098|RL34_TOBAC5.469e-2167.6960S ribosomal protein L34 OS=Nicotiana tabacum OX=... [more]
sp|Q9FE65|RL342_ARATH1.658e-2081.6360S ribosomal protein L34-2 OS=Arabidopsis thalian... [more]
sp|Q42351|RL341_ARATH6.364e-2079.5960S ribosomal protein L34-1 OS=Arabidopsis thalian... [more]
sp|Q9LJW6|RL343_ARATH8.775e-1975.5160S ribosomal protein L34-3 OS=Arabidopsis thalian... [more]
sp|O42846|RL34A_SCHPO6.375e-1055.1060S ribosomal protein L34-A OS=Schizosaccharomyces... [more]
sp|Q9URT8|RL34B_SCHPO9.230e-1055.1060S ribosomal protein L34-B OS=Schizosaccharomyces... [more]
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BLAST of Vfaba.Hedin2.R1.3g044760.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G69620.11.696e-2181.63| ribosomal protein L34 | Chr1:26189900-26191081 F... [more]
AT1G26880.16.511e-2179.59| Ribosomal protein L34e superfamily protein | Chr... [more]
AT3G28900.18.977e-2075.51| Ribosomal protein L34e superfamily protein | Chr... [more]
AT1G26880.27.737e-1579.49| Ribosomal protein L34e superfamily protein | Chr... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.20.340.10coord: 22..98
e-value: 2.8E-18
score: 67.6
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 29..73
e-value: 1.0E-9
score: 38.5
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 15..80

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.3g044760.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g044760.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g044760.1; organism=Vicia faba; type=mRNA; length=447bp
ATGAGAATAACGGATAGTTCTGAGAATCCTCCACCTGTGACTAGATCTGA
GATTCTAGAAGGAAAAGTGAAGGATCATCTATGGAGGAGGATTCCATATT
TGAGACCTACTGAATACGAGAGGTCTAGATTGTCTCGCAACCTTCGAATA
GTTAATAGAGCATATGGTGGTGTTTTATCTGGAAGAGCTGTTAGGGAAAG
GATGATTCGTGCTTTCCTTGTTGAAGAGAAAAATTTTGAAGAAAGTTTTG
AAGATACAAAAGACAAAAGAAATCTAGCAACCCATAAACCTCGAGAATCT
TTCTCGTTTGAACCCAATAATTTCATCAATAAAATTGTTCCTTCTTGCAT
CCTGAAACTCATCTCTTCATTCTTCTACCGTCCCATCAACCTTCATGTCC
ATGTATTTCTTCCTTTGCTGTTGGAGTTCCCCTTATCTCACCGATAG
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protein sequence of Vfaba.Hedin2.R1.3g044760.1_vfh_v1

>Vfaba.Hedin2.R1.3g044760.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g044760.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g044760.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=148bp
MRITDSSENPPPVTRSEILEGKVKDHLWRRIPYLRPTEYERSRLSRNLRI
VNRAYGGVLSGRAVRERMIRAFLVEEKNFEESFEDTKDKRNLATHKPRES
FSFEPNNFINKIVPSCILKLISSFFYRPINLHVHVFLPLLLEFPLSHR
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mRNA from alignment at chr3:267419681..267420429+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.3g044760.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g044760.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g044760.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:267419681..267420429+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008195Ribosomal_eL34
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome