Vfaba.Hedin2.R1.3g050560.1

Transcript Overview
NameVfaba.Hedin2.R1.3g050560.1
Unique NameVfaba.Hedin2.R1.3g050560.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length780
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:323404079..323404858 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvfhL386Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL505Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL678Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL042Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL208Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL313Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL521Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0769Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0860Cajanus cajan Asha genome v1.0Cajanus cajan
pvvfhL042Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL262Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL553Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL509Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL635Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL208Pisum sativum Cameor genome v1aPisum sativum
psvfhL571Pisum sativum Cameor genome v1aPisum sativum
psvfhL590Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL078Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvfhR186Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL091Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL220Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR329Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR337Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR402Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhL348Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhL076Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0109Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL246Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0175Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL443Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL448Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0286Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0572Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0890Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0897Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1228Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR347Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR358Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR296Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR303Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR373Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR359Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR401Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL041Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL177Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL268Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL076Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL362Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL498Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL686Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL034Cicer arietinum
carvfhL175Cicer arietinum
carvfhL268Cicer arietinum
ccavfhL093Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL211Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL339Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR433Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR504Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR517Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR524Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR366Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR459Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL431Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL576Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL654Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL730Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR441Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR454Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR461Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvunR306Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR373Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.04G326300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_12024Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg32157.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004497418.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cc_v2.0_07741.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_28296Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G164800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
XM_058882171.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cr_07706.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
XM_058915132.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan03g235900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014639838.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun01g157700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_03318.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Psat6g070200.1Pisum sativum Cameor genome v1aPisum sativum
rna-KK1_010088Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_04G02356.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigst.04G209800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-TanjilR_18725Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun01g157700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va03G072800.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat3g044200.1Pisum sativum Cameor genome v1aPisum sativum
Ca_07692.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.001G175400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr01.1513Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.5g136080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.5g109760.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g042040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g050560Vfaba.Hedin2.R1.3g050560_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g050560.1_vfh_v1-exonVfaba.Hedin2.R1.3g050560.1_vfh_v1-exon-chr3_vfh_v1:323404079..323404858Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g050560.1_vfh_v1-cdsVfaba.Hedin2.R1.3g050560.1_vfh_v1-cds-chr3_vfh_v1:323404079..323404858Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g050560.1_vfh_v1Vfaba.Hedin2.R1.3g050560.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.3g050560.1_vfh_v1Vfaba.Hedin2.R1.3g050560.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VW07|A0A072VW07_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_1g066750 PE=4 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.227e-100
Identity = 195/293 (66.55%), Postives = 218/293 (74.40%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQV---RSSKQTTAKKGL--SGDGAPTKCRCRFWWFPHT------------DCW-FRRKGKASK---ASTKNGPKSKESEREQQQQQHEEEEDNRQVKVKA----------FVSTPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETEQPN-EKQSE--SVSKLRFFTELEDSVRERMNESESVGELKRKEE-DKVDSVGFPIVLTRCKSERTRR 258
            MKLS+   KPISSP RMEKFP PLMRFLK+NA N+SRGR +SK SNSMF ILRKKNT  TSIETKEPSSPKVTCMGQV   RSSKQ T KKG   SGDGAP+KCRC FWW PHT             C+ FRRK KASK   AS KNG  SKES   +++++ EEEE+NR  K K           F STPP+NALLLTRCKSAPYSSSSLASRFW SP R+EETEQP+ EKQSE  SVSKLRFF ELEDS RER+ ESE V E+KRKEE ++ +S+ FP+VLTRCKSER R+
Sbjct:    1 MKLSA---KPISSPGRMEKFPPPLMRFLKSNAANKSRGRTRSK-SNSMFLILRKKNT--TSIETKEPSSPKVTCMGQVRVKRSSKQPTTKKGRPSSGDGAPSKCRCPFWWVPHTLFCCHFVRKDSVCCFGFRRKSKASKVSEASMKNG--SKES-YIEEEEEEEEEENNRVFKAKVLVSDSNDSSTFCSTPPKNALLLTRCKSAPYSSSSLASRFWGSPLRNEETEQPSEEKQSESVSVSKLRFFKELEDSARERITESEKVCEMKRKEETEEGESIAFPLVLTRCKSERARK 284          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y1Y8|A0A1S2Y1Y8_CICAR (uncharacterized protein LOC101492869 OS=Cicer arietinum OX=3827 GN=LOC101492869 PE=4 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.645e-77
Identity = 179/294 (60.88%), Postives = 202/294 (68.71%), Query Frame = 0
Query:    9 KPISSPSRME-KFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVRS-----SKQTTAKKGL----SGDGAPTKCRCRFWWFPHT-------------DCW-FRRKGKASK---ASTKNGPKSKESEREQQQQQHEEEEDNRQVKVKAFVS--------TPPRNALLLTRCKSAP----YSSSSLASRFWDSPARSEE-TEQPNEKQ----SESVSKLRFFTELEDSVRERMNESESVGELKRKEEDKVDSVGFPIVLTRCKSERTRR 258
            KPISSP RM+ KFP PLMRFL+TNAGNRSRGR KS   NSMF IL KKNTT+  IETKEPSSPKVTCMGQVR      SKQ TAKKGL    SG+ +PTKC   FWW PHT              C+ FRRK KASK   ASTKNG      E ++++++ EEEE NR V   AF S        TPPRNALLLTRCKSAP     SSSSLA+RFW SP RSEE TEQ  E++    +ESVSKLRFF ELEDS+RER+ ESE V +LKRKEE + +SV   +VL RCKSERTR+
Sbjct:    8 KPISSPGRMDNKFPPPLMRFLRTNAGNRSRGRSKS---NSMFLILTKKNTTT--IETKEPSSPKVTCMGQVRVKRSSISKQPTAKKGLPSTVSGNFSPTKCNRCFWWVPHTLFCFQSVIHPNFACCFRFRRKEKASKVSEASTKNG----SKESKRREEEEEEEEKNRVVSNNAFFSSSSSSFCSTPPRNALLLTRCKSAPCSSSSSSSSLANRFWGSPLRSEEKTEQLFEEKQRHSTESVSKLRFFKELEDSIRERIVESERVCKLKRKEEAEGNSVARCLVLKRCKSERTRK 292          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A394DE77|A0A394DE77_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_06243 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.979e-54
Identity = 143/326 (43.87%), Postives = 184/326 (56.44%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIE-TKEPSSPKVTCMGQVRSSKQTTAK--------KGLSGDGAPT-----------------KCRCRFWW----FPHTDCWFRRK-GKASKASTKNGPKSKESEREQQQQQHEEEEDNRQVKVKAFV---STPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEE------------------------------TEQPNEKQSESVSKLRFFTELEDS-VRER---MNESESVGELKRKEEDKVD-SVGFPIVLTRCKSERTR 257
            MKLSS   KPISSP R +KFP PLMRFL+TN G++S+GR +SK SNS    LRKKN   T+IE T+EPSSPKVTCMGQVR  + + +K        +  + DGAP                  KCRC+ +W    F      FRRK  K  +ASTK   +++  ++EQ + ++E+   N      +F    STPP NALLLT+C+SAPY SSSLASRFW SP R+EE                              +E+ +++ SE+  KL FF ELEDS VR+R   MN++E V  LK++E  + D     PIVLTRCKSE  R
Sbjct:    1 MKLSS---KPISSPGRTDKFPPPLMRFLRTNVGSKSKGRSRSK-SNSRTMFLRKKN---TNIETTQEPSSPKVTCMGQVRVKRSSKSKQPNTTTTTRAAASDGAPARCPCLWIKKNAFSIKTCKCRCKPFWPKWGFLFCVGRFRRKSNKMKEASTKTELETEHVDKEQDKSEYEKRAMNGD-DFSSFASNSSTPPINALLLTKCRSAPYRSSSLASRFWGSPLRNEEETEEKQGNENENRGSSYSENELPHLERNSVSEEESKRVSENEEKLVFFKELEDSLVRDRVGSMNKTEKVEGLKKRENGEGDYEAPCPIVLTRCKSEPAR 318          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5PLI6|A0A6A5PLI6_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00032968 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.552e-52
Identity = 136/319 (42.63%), Postives = 181/319 (56.74%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIET-KEPSSPKVTCMGQV------RSSKQTTAKKGLSGDGAPTKCRCRFWWFPHTDC--------W--------FRRK-GKASKASTKNGPKSKESEREQQQQQHEEEEDNRQVKVKAFVS---TPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEE------------------------------TEQPNEKQSESVSKLRFFTELEDS-VRER---MNESESVGELKRKEEDKVD-SVGFPIVLTRCKSERTR 257
            MKLS+   KPISSP R +KFP PLMRFL++N GN+S+GR +S +S +MF  +RKKNT   +IET +EP+SPKVTCMGQV      +S +  T  +  + DGAP +C C    F +  C        W        FRRK  K  + STK   +++  ++E+ + ++EE   N    V +F S    PP NALLLTRC+SAPY SSSLASRFW SP RSEE                              +E   ++ SE+  KL FF ELEDS +R+R   MN++E++  L ++E+ K D    +PIV TRCKSE  R
Sbjct:    1 MKLST---KPISSPGRSDKFPPPLMRFLRSNVGNKSKGRSRS-NSKTMF--VRKKNT---NIETTREPTSPKVTCMGQVIVKRSNKSKQPNTTTRAAASDGAPARCPCLKNVFHNKHCQCQPFWPKWGFFFCVGSFRRKSNKMKEGSTKTELETEHCDKEEDKSKYEERVMNGD-DVSSFASNSCIPPINALLLTRCRSAPYRSSSLASRFWGSPLRSEEETEEKQGNENLCRGSSYSENELTQLERKSVSEGEGKRVSENEEKLAFFKELEDSLLRDRIGSMNKTENIEGLMKREKVKGDYEAPYPIVFTRCKSEPAR 309          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|K7LZM3|K7LZM3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102666606 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.134e-49
Identity = 128/288 (44.44%), Postives = 161/288 (55.90%), Query Frame = 0
Query:    9 KPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVRSSKQTT------AKKGLS-GDGAPTKCRCRFWWFPHT---------------DC--------WFRRKGKASKASTKNGPKSKESEREQQQQQHEEEEDNRQVKVKAFVS----TPPRNALLLTRCKSAPYSSSSLASRFWDSPA-----RSEETEQPNEKQSESVSKLRFFTELEDSVRERMNESESVGELKRKEEDKVDSVGFPIVLTRCKSERTR 257
            KPISSP R EKFP PLMRFL+ NA +RSRGR  S+++ +MF  LRKKN   T+IET+EPSSPKVTCMGQVR  +  T      AK+  S G GAPTKCRC   W PH                 C        + +RK   SK +  + PK++ + R +    +++ E   +V   AFVS    TPPRNALLLTRC+SAP        RF +        R       N +  +  +KLRFF ELE+S+RER+ ESE     +R+E D V     P+VLTRCKSE  R
Sbjct:    6 KPISSPGRTEKFPPPLMRFLRNNAASRSRGR--SRTTTTMF--LRKKN---TNIETQEPSSPKVTCMGQVRVKRSATKRVDSDAKRVPSAGAGAPTKCRC-CSWVPHALFFHRFRKPGFSFPFQCKQVRPNWGFLKRKKTDSKVTETSSPKTELNFRGRHNPSYDDSEHEDRVNPPAFVSNTSTTPPRNALLLTRCRSAP------GRRFLNKETEVVENRVNREHSENNRDPKLEAKLRFFKELEESLRERIMESEK----QREESDSVH----PLVLTRCKSEPAR 271          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445HFP0|A0A445HFP0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_036632 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.223e-49
Identity = 128/288 (44.44%), Postives = 161/288 (55.90%), Query Frame = 0
Query:    9 KPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVRSSKQTT------AKKGLS-GDGAPTKCRCRFWWFPHT---------------DC--------WFRRKGKASKASTKNGPKSKESEREQQQQQHEEEEDNRQVKVKAFVS----TPPRNALLLTRCKSAPYSSSSLASRFWDSPA-----RSEETEQPNEKQSESVSKLRFFTELEDSVRERMNESESVGELKRKEEDKVDSVGFPIVLTRCKSERTR 257
            KPISSP R EKFP PLMRFL+ NA +RSRGR  S+++ +MF  LRKKN   T+IET+EPSSPKVTCMGQVR  +  T      AK+  S G GAPTKCRC   W PH                 C        + +RK   SK +  + PK++ + R +    +++ E   +V   AFVS    TPPRNALLLTRC+SAP        RF +        R       N +  +  +KLRFF ELE+S+RER+ ESE     +R+E D V     P+VLTRCKSE  R
Sbjct:    6 KPISSPGRTEKFPPPLMRFLRNNAASRSRGR--SRTTTTMF--LRKKN---TNIETQEPSSPKVTCMGQVRVKRSATKRVDSDAKRVPSAGAGAPTKCRC-CSWVPHALFFHRFIKPGFSFPFQCKQVRPNWGFLKRKKTDSKVTETSSPKTELNFRGRHNPSYDDSEHEDRVNPPAFVSNTSTTPPRNALLLTRCRSAP------GRRFLNKETEVVENRVNREHSENNRDPKLEAKLRFFKELEESLRERIMESEK----QREESDSVH----PLVLTRCKSEPAR 271          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A540NQ60|A0A540NQ60_MALBA (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_001261 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.075e-49
Identity = 139/310 (44.84%), Postives = 175/310 (56.45%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVR---SSKQTTAKKGLS--GDGAPTKCRCRF----------------------W--WFPHTDCWFRRKGKASKASTK-----NGPKSKESEREQQQQQHEEEEDNRQVKVKAFV-----STPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETE--QPNEKQSESVS------------KLRFFTELEDSVRERMNESESVGELKRKEEDKVDSVGFPIVLTRCKSERTR 257
            MKLS+   KPISSP R +KFP PL+RFL+TN G+RSR       S+ MF  +RKKN  + ++ET+EPSSPKVTCMGQVR   SSKQ  ++ G +    GAPT+ RC++                      W  W       F RKG+  +   K       P    S+ E   ++ E++E  R  K KAFV     STPP+NALLLTRC+SAPY +SSLASRFW SP R+EETE  Q    + ES+S            KL FF ELE  +RERM +S S  +   K+ D V S G P++LTRCKSE  R
Sbjct:    1 MKLSA---KPISSPGRTDKFPPPLVRFLRTNVGSRSR---ARLRSSPMF--VRKKNAAAAAVETQEPSSPKVTCMGQVRVRRSSKQGGSRTGGARRATGAPTRRRCKWISNALFCRHFSGIIKAKSFRPVWCKWVRFFQLGFCRKGEIKEDPAKIESKFEDPIEGCSDGEDFIEEQEDQEFER--KAKAFVYSSSASTPPKNALLLTRCRSAPYRTSSLASRFWGSPVRAEETEAQQKPTSEGESISGQESRLESESEEKLEFFRELESEIRERMAKSASTED---KDWDFVGS-GRPLILTRCKSEPAR 296          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5N5H804|A0A5N5H804_9ROSA (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_024483 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.477e-48
Identity = 138/310 (44.52%), Postives = 177/310 (57.10%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVR---SSKQTTAKKGLS--GDGAPTKCRCRF----------------------W--WFPHTDCWFRRKGKASKASTKNGPKSKE-----SEREQQQQQHEEEEDNRQVKVKAFV-----STPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETE--QPNEKQSESVS------------KLRFFTELEDSVRERMNESESVGELKRKEEDKVDSVGFPIVLTRCKSERTR 257
            MKLS+   KPISSP R +KFP PL+RFL+TN G+RSR       S+ MF  +RKKN T+ ++ET+EPSSPKVTCMGQVR   SSK+  ++ G +    GAPT+ RC++                      W  W P       RK +  +   K G K ++     S+ E   ++ E++E  R  K KAF+     STPP+NALLLTRC+SAPY +SSLASRFW SP R+EETE  Q    + ES+S            KL FF ELE  +RERM +S S  +   K+ D V S G P+ LTRCKSE  R
Sbjct:    1 MKLSA---KPISSPGRTDKFPPPLVRFLRTNVGSRSR---GRLRSSPMF--VRKKNATAAAVETQEPSSPKVTCMGQVRVRRSSKKGDSRTGGARRATGAPTRRRCKWISNGLFCRHFPGKIKAKSFRPVWPKWVPFFQLGLCRKSEIKEYPPKIGSKFEDPIEGCSDGEDFIEEQEDQEFER--KAKAFIYSSSASTPPKNALLLTRCRSAPYRASSLASRFWGSPVRAEETEAQQKATSEGESISGQESRLESESEEKLEFFRELESEIRERMAKSASTED---KDWDFVGS-GRPLTLTRCKSEPAR 296          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A498IAA1|A0A498IAA1_MALDO (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_004592 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.562e-48
Identity = 138/313 (44.09%), Postives = 173/313 (55.27%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVR---SSKQTTAK--KGLSGDGAPTKCRCRF----------------------W--WFPHTDCWFRRKGKASKASTK-----NGPKSKESEREQQQQQHEEEEDNRQVKVKAFV-----STPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETEQ----PNEKQSESVSKLR----------FFTELEDSVRERMNESESVGELKRKEEDKVDSVGF---PIVLTRCKSERTR 257
            MKLS+   KP+SSP R +KFP PL+RFL+TN G+RSR       S+ MF  +RKKNT +  +ET+EPSSPKVTCMGQVR   SSKQ  ++  +     GAP++ RC++                      W  W P     F RKG+  K   K       P    S+ E   ++  ++E  R  K KAFV     STPPRNALLLTRC+SAPY SSSLASRFW SP R+EETE+     +E+QS S  + R          FF ELE  +RERM +S S+       EDK    G    P++LTRCKSE  R
Sbjct:    1 MKLSA---KPMSSPGRTDKFPPPLVRFLRTNVGSRSR---ARLRSSPMF--VRKKNTPA--VETQEPSSPKVTCMGQVRVRRSSKQGGSRPRRARGTTGAPSRRRCKWIRTALFSRHFPGKIKAKSFRPVWRKWVPFFQLGFCRKGEVKKDPPKIESKFEDPIEGLSDGEDFGEEQGDQEFER--KAKAFVVSPSLSTPPRNALLLTRCRSAPYRSSSLASRFWGSPVRAEETEEEQKPTSERQSISDEEARLESESEEKLEFFRELEGEIRERMAKSASI-------EDKDGDFGGSARPLILTRCKSEPAR 294          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Match: tr|V7BI17|V7BI17_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G164800g PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.297e-44
Identity = 123/289 (42.56%), Postives = 159/289 (55.02%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVRSSKQTTAKKGLSGDGAPTKCRCRFWWFPHT---------------DC---W----FRRKGKASKASTKNGPKSKESEREQQQQQHEEEEDNRQVKVKAFVS----TPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETEQ----PNEKQSESV--SKLRFFTELEDSVRERMNESESVGELKRKEEDKVDSVGFPIVLTRCKSERTR 257
            MKL +   KPISSP R +KFP PLMRFL+ NAG+RS    + +S ++    LRKKNT   +IET+EPSSPKVTCMGQVR  +    +  ++ +GAPT CRC  WW P                  C   W    F R+ K     T+  PK++ +   +    +++ E   +  + AFVS     PPRNALLL RC+SAPY   S   R W+     EETE     PNEK  +    +KLRFF ELE+S+RER+ ESE      +  ED   +   P+VLTRCKSE  R
Sbjct:    1 MKLHT---KPISSPGRTDKFPPPLMRFLRNNAGSRS----RGRSRSTTTIFLRKKNT---AIETQEPSSPKVTCMGQVRVKRSAAKRVPIATEGAPTNCRCS-WWVPRALLFNRLAKPGFCFPFQCKRVWPNWGFSRRNKRDSKVTEASPKTELNFMARSNPNYDDSESENRATLGAFVSNTTTAPPRNALLLMRCRSAPY---SYPRRIWN-----EETEAENRVPNEKNRDLKFEAKLRFFKELEESLRERIMESE------KAREDSHSAR--PLVLTRCKSEPAR 262          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. Araport11
Match: AT5G03110.1 (| protamine P1 family protein | Chr5:730346-731197 FORWARD LENGTH=283 | 201606)

HSP 1 Score: 95.5153 bits (236), Expect = 5.244e-23
Identity = 100/279 (35.84%), Postives = 140/279 (50.18%), Query Frame = 0
Query:    9 KPISSPSRMEKFPSPLMRFL--KTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVRSSKQTTAKKGLSGDGAPTKCRCRFWWFPHTDCWFRRKGKASKASTKNGPK------------SKESEREQQQQQHEEEEDNRQVKV-----------KAFVS---TPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETEQPNEKQSESVSKLRFFTELEDSVRERMNESESVGELKRKEED--KVDSVGFPIVLTRCKSERTR 257
            +P+SSP R+EK+P P M FL  K+N G+ SR R +S+  +    +  ++N ++ ++  +EPSSPKVTCMGQVR ++     K  S D  PT+ RC   W  +   + +  GK    +    PK             KE +  + Q  H   E  R++K            K FVS   TPP NALLLTR +SAPY SSSLA RFW         E+ N+++ ES   +R      +   E++N       + R EE+  K+  V  P VLTR KSE  R
Sbjct:    6 RPVSSPGRVEKYPPPFMGFLRSKSNGGSTSRSRSRSRGRSRASPLFVRRNKSAAAV-AQEPSSPKVTCMGQVRVNRSKPKIKPESRDN-PTRRRCE--WLRNASFYNKFAGKIKTMTF--WPKWRLCSFSCACRNLKEKDSPRSQLDHPTTESVREIKEEIEGEENFEIPKLFVSPATTPPINALLLTRSRSAPYRSSSLAFRFW---------EENNQREVESQQNVRSEKTDSEVPIEKINGFHEPEYVDRDEEEFTKLRFVRQP-VLTRSKSEPAR 268          
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. Araport11
Match: AT2G37100.1 (| protamine P1 family protein | Chr2:15591147-15592040 FORWARD LENGTH=297 | 201606)

HSP 1 Score: 80.1073 bits (196), Expect = 2.343e-17
Identity = 99/295 (33.56%), Postives = 142/295 (48.14%), Query Frame = 0
Query:    1 MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQILRKKNTTSTSIETKEPSSPKVTCMGQVRSSKQTTAK-----------------------------KGLSGDGAPTKCRCRFW--WFPHTDCWFRRKGKASKASTKNGP---KSKESEREQQQQQHEEEEDNRQVKVKAFVSTPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETEQPNEKQSESVSKLRFFTELEDSVRERMNESE-SVGELKRKEEDKVDSVGFP---IVLTRCKSERTR 257
            M+ SS++P  +SSP R E  P  LMRFL+T    +SR R +S+S   +F   R+KN  S + ET+EP+SPKVTCMGQVR ++    K                                +G   PT C    W  W   +   F +K +   +S+++ P   +S     E ++ + EE ++      K+F +TPPRNA LLTRC+SAPY S S A+  ++     EET +   ++  S   +    E + SV E     E S  E    EE K   +G P   ++LTRC SE  R
Sbjct:    1 MRFSSSRP--VSSPGRTEN-PPLLMRFLRT----KSRSRSRSRSRRPIF--FRRKNA-SAAAETQEPTSPKVTCMGQVRINRSKKPKPETARVSGGATERRRQSRRCGWVKNAFPCHSFTGIIKPT-CFSPVWRKWKSFSHASFSKKSEKRSSSSRSEPIFGRSTVEPEEPEETRKEENQEEEASSCKSFTATPPRNAFLLTRCRSAPYRSPSSANSLFED---QEETNKAPFQRHASSENVSVSEEPKTSVTETTERLEDSRRESAASEEPKRSVLGSPRQCLILTRCNSEPAR 281          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A072VW07|A0A072VW07_MEDTR1.227e-10066.55Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A1S2Y1Y8|A0A1S2Y1Y8_CICAR3.645e-7760.88uncharacterized protein LOC101492869 OS=Cicer arie... [more]
tr|A0A394DE77|A0A394DE77_LUPAN6.979e-5443.87Uncharacterized protein OS=Lupinus angustifolius O... [more]
tr|A0A6A5PLI6|A0A6A5PLI6_LUPAL5.552e-5242.63Uncharacterized protein OS=Lupinus albus OX=3870 G... [more]
tr|K7LZM3|K7LZM3_SOYBN1.134e-4944.44Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445HFP0|A0A445HFP0_GLYSO1.223e-4944.44Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A540NQ60|A0A540NQ60_MALBA3.075e-4944.84Uncharacterized protein OS=Malus baccata OX=106549... [more]
tr|A0A5N5H804|A0A5N5H804_9ROSA3.477e-4844.52Uncharacterized protein OS=Pyrus ussuriensis x Pyr... [more]
tr|A0A498IAA1|A0A498IAA1_MALDO6.562e-4844.09Uncharacterized protein OS=Malus domestica OX=3750... [more]
tr|V7BI17|V7BI17_PHAVU1.297e-4442.56Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
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BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.3g050560.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G03110.15.244e-2335.84| protamine P1 family protein | Chr5:730346-731197... [more]
AT2G37100.12.343e-1733.56| protamine P1 family protein | Chr2:15591147-1559... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
NoneNo IPR availablePANTHERPTHR33448CHLOROPLAST PROTEIN HCF243-RELATEDcoord: 122..257

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.3g050560.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g050560.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g050560.1; organism=Vicia faba; type=mRNA; length=780bp
ATGAAGCTATCTAGTACCAAACCCAAACCCATTTCTAGTCCAAGTAGAAT
GGAAAAATTCCCATCACCATTAATGAGATTCTTAAAAACAAATGCAGGAA
ACAGAAGCAGAGGAAGGTTAAAATCAAAATCAAGTAACTCTATGTTCCAA
ATCCTAAGGAAAAAGAACACTACCAGTACCTCCATCGAAACCAAGGAACC
TTCTTCCCCAAAAGTCACTTGCATGGGTCAAGTTCGCTCCTCCAAACAAA
CCACCGCTAAAAAGGGTCTATCCGGCGACGGAGCTCCGACTAAATGCCGC
TGCCGGTTTTGGTGGTTCCCACATACAGATTGCTGGTTTCGAAGAAAGGG
AAAAGCCTCTAAAGCTTCAACGAAGAATGGACCGAAATCGAAAGAATCAG
AAAGAGAACAACAACAACAACAACATGAAGAAGAAGAAGATAACAGACAA
GTTAAAGTTAAAGCTTTTGTTTCTACGCCTCCGAGAAATGCTTTATTACT
AACGAGGTGTAAATCAGCACCTTATAGTTCTTCTTCATTAGCAAGTAGGT
TTTGGGATTCTCCGGCAAGGAGCGAAGAAACAGAGCAACCCAATGAGAAA
CAGAGTGAGTCCGTTTCGAAGCTGCGGTTTTTCACAGAACTTGAAGATTC
AGTGAGAGAAAGAATGAATGAGTCTGAAAGTGTTGGTGAATTGAAGAGAA
AGGAAGAAGATAAAGTAGACTCTGTAGGGTTTCCAATAGTGCTAACGAGG
TGCAAATCTGAAAGAACAAGAAGATTTTGA
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protein sequence of Vfaba.Hedin2.R1.3g050560.1_vfh_v1

>Vfaba.Hedin2.R1.3g050560.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g050560.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g050560.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=259bp
MKLSSTKPKPISSPSRMEKFPSPLMRFLKTNAGNRSRGRLKSKSSNSMFQ
ILRKKNTTSTSIETKEPSSPKVTCMGQVRSSKQTTAKKGLSGDGAPTKCR
CRFWWFPHTDCWFRRKGKASKASTKNGPKSKESEREQQQQQHEEEEDNRQ
VKVKAFVSTPPRNALLLTRCKSAPYSSSSLASRFWDSPARSEETEQPNEK
QSESVSKLRFFTELEDSVRERMNESESVGELKRKEEDKVDSVGFPIVLTR
CKSERTRRF
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mRNA from alignment at chr3:323404079..323404858-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.3g050560.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g050560.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g050560.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:323404079..323404858- (Vicia faba
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