Vfaba.Hedin2.R1.3g063640.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XVH9|A0A1S2XVH9_CICAR (uncharacterized protein LOC101498832 OS=Cicer arietinum OX=3827 GN=LOC101498832 PE=4 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.538e-88 Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKSTKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 MKRT+PWS + D+SS DESSSLHSDSE D+ETGGKKSK KS K+KSAPIDFE+LKR+GYKGGPS+LKVPPPKE DTK+DWSWSSGKEKRI+KE EETYEERKKTREALS+GEQLPTVLTRNEK NLSFSQKEKRKRELGQASRGKNYVEEEKR LR++GVYSGFD+ Sbjct: 1 MKRTMPWS---DDDESSEDESSSLHSDSEHDSETGGKKSKAKSVKQKSAPIDFESLKRHGYKGGPSILKVPPPKEGDTKQDWSWSSGKEKRIDKETEETYEERKKTREALSIGEQLPTVLTRNEKNNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRDSGVYSGFDS 165
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6PJL7|A0A2Z6PJL7_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_28780 PE=4 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.185e-82 Identity = 146/164 (89.02%), Postives = 158/164 (96.34%), Query Frame = 0 Query: 5 LPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKSTKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 +PWSDD E DDSS DESSSLHSDSE D+ETGGKKSKGKS K+K+APIDF+ALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKR++KE+EETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEK+KR+LGQASRGKNYVEEEKR LR+NGVYSGFD+ Sbjct: 1 MPWSDD-EGDDSSADESSSLHSDSEHDSETGGKKSKGKSIKQKTAPIDFDALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRVDKEIEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKKKRDLGQASRGKNYVEEEKRLLRDNGVYSGFDS 163
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NUK3|A0A2K3NUK3_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g003193 PE=4 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 5.322e-82 Identity = 131/173 (75.72%), Postives = 140/173 (80.92%), Query Frame = 0 Query: 24 LHSDSEGDNETGGKKSK----------------------------GKSTKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 LHSDSE D+E GGKKSK GKS K+K+APIDF+ALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKR+NKE+EETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEK+KR+LGQASRGKNYVEEEKR LR+NGVYSGFD Sbjct: 19 LHSDSEHDSENGGKKSKDLVVGDIYPSEYFIQCNARWFLTLLYSCGKSIKQKTAPIDFDALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRVNKEIEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKKKRDLGQASRGKNYVEEEKRLLRDNGVYSGFDT 191
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|G7IDL8|G7IDL8_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11431273 PE=4 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 1.047e-78 Identity = 146/168 (86.90%), Postives = 160/168 (95.24%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKSTKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 MKRT+PWS + DDSSNDESSSLHSDSE D++TG KKSKGKSTK+KSAPIDFEALKRYGYKGGPSVLKVPPPKEDD+K+DWSWSSGKEKR+ KEVEETYEERKKTREALSLGEQ+PTVLTRN+KKNLSFSQKEK+KR+LGQASRGKNYVEEEKR LR+NGVYSGFD+ Sbjct: 1 MKRTMPWS---DDDDSSNDESSSLHSDSENDSKTGAKKSKGKSTKQKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDSKRDWSWSSGKEKRVEKEVEETYEERKKTREALSLGEQMPTVLTRNDKKNLSFSQKEKKKRDLGQASRGKNYVEEEKRLLRDNGVYSGFDS 165
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|I1JF83|I1JF83_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_02G145500 PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.622e-75 Identity = 126/171 (73.68%), Postives = 145/171 (84.80%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKSTKKK---SAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 MKRT+PWSDDDES S +D +ETGG+ SKGKS K+K S IDFEALKR+GY+GGPSVLKVP PKEDD+K+DWSWS+GKEKR++KE+EE+YEERKKTREA+SLGE+LP LTRN+KKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRENG+YSGFDA Sbjct: 1 MKRTMPWSDDDESSSSHSDSERD--------SETGGENSKGKSRKQKTEKSGVIDFEALKRHGYRGGPSVLKVPAPKEDDSKQDWSWSTGKEKRVDKEIEESYEERKKTREAISLGEELPAALTRNDKKNISFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGFDA 163
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QB92|A0A0B2QB92_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_003931 PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.622e-75 Identity = 126/171 (73.68%), Postives = 145/171 (84.80%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKSTKKK---SAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 MKRT+PWSDDDES S +D +ETGG+ SKGKS K+K S IDFEALKR+GY+GGPSVLKVP PKEDD+K+DWSWS+GKEKR++KE+EE+YEERKKTREA+SLGE+LP LTRN+KKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRENG+YSGFDA Sbjct: 1 MKRTMPWSDDDESSSSHSDSERD--------SETGGENSKGKSRKQKTEKSGVIDFEALKRHGYRGGPSVLKVPAPKEDDSKQDWSWSTGKEKRVDKEIEESYEERKKTREAISLGEELPAALTRNDKKNISFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGFDA 163
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371G491|A0A371G491_MUCPR (Uncharacterized protein OS=Mucuna pruriens OX=157652 GN=CR513_33503 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.540e-74 Identity = 125/169 (73.96%), Postives = 146/169 (86.39%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKSTKKKSAPIDFEALKRYGYKGGPSVLKVPPPKE-DDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 MKRT+PWSDDDES S +D +ETGG+ SKGKS K+KS IDFEALKR+GY+GGPSVLKVP PKE DD+K+DWSWSSGKEKR++KE+EE+YEER+KTR+A+SLGE+LP VLTRN+KKNLSFSQKEKRKRE+GQASRGKNYVEEEKR LRE+G+YSGFDA Sbjct: 1 MKRTMPWSDDDESSSSHSDSERD--------SETGGENSKGKSRKQKSGVIDFEALKRHGYRGGPSVLKVPAPKEGDDSKQDWSWSSGKEKRVDKEIEESYEERQKTRKAISLGEELPAVLTRNDKKNLSFSQKEKRKREMGQASRGKNYVEEEKRLLRESGIYSGFDA 161
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|C6SYK6|C6SYK6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 4.545e-73 Identity = 124/169 (73.37%), Postives = 143/169 (84.62%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKSTKKK---SAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGF 166 MKRT+PWSDDDES S +D +ETGG+ SKGKS K+K S IDFEALKR+GY+GGPSVLKVP PKEDD+K+DWSWS+GKEKR++KE+EE+YEERKKTREA+SLGE+LP LTRN+KKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRENG+YSGF Sbjct: 1 MKRTMPWSDDDESSSSHSDSERD--------SETGGENSKGKSRKQKTEKSGVIDFEALKRHGYRGGPSVLKVPAPKEDDSKQDWSWSTGKEKRVDKEIEESYEERKKTREAISLGEELPAALTRNDKKNISFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGF 161
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|I1L864|I1L864_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801123 PE=4 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 5.601e-73 Identity = 126/171 (73.68%), Postives = 142/171 (83.04%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKS---TKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 MKRT+PWSDDDES S +D +ETGG SKGKS T KKS IDFEALKR+GY+GGPSVLKVP PKEDD+KK+WSWS+GKEK ++KE+EE+YEERKKTREA+SLGE+LP LT N+KKNLSFSQKEKRKRELGQASRGKNYVEEEKR LRENG+YSGFDA Sbjct: 1 MKRTMPWSDDDESSSSHSDSECD--------SETGGGNSKGKSRKQTTKKSGLIDFEALKRHGYRGGPSVLKVPAPKEDDSKKNWSWSTGKEKHVDKEIEESYEERKKTREAISLGEELPAALTWNDKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGFDA 163
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445IH18|A0A445IH18_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_025839 PE=4 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 5.601e-73 Identity = 126/171 (73.68%), Postives = 142/171 (83.04%), Query Frame = 0 Query: 1 MKRTLPWSDDDESDDSSNDESSSLHSDSEGDNETGGKKSKGKS---TKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREALSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 MKRT+PWSDDDES S +D +ETGG SKGKS T KKS IDFEALKR+GY+GGPSVLKVP PKEDD+KK+WSWS+GKEK ++KE+EE+YEERKKTREA+SLGE+LP LT N+KKNLSFSQKEKRKRELGQASRGKNYVEEEKR LRENG+YSGFDA Sbjct: 1 MKRTMPWSDDDESSSSHSDSECD--------SETGGGNSKGKSRKQTTKKSGLIDFEALKRHGYRGGPSVLKVPAPKEDDSKKNWSWSTGKEKHVDKEIEESYEERKKTREAISLGEELPAALTWNDKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGFDA 163
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. Araport11
Match: AT4G04614.2 (| hypothetical protein | Chr4:2327308-2327914 REVERSE LENGTH=176 | 201606) HSP 1 Score: 135.576 bits (340), Expect = 1.199e-40 Identity = 71/129 (55.04%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 41 GKSTKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREA-LSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 + KK D+E+L+++GYK + +P P E K+DWSW++GK+K+ +EV+E+Y+ER+ TR A ++ GE + RN++KNLSFSQKEK+KR+LGQASRGKNYVEEEKRQLRE+GVYSGFD+ Sbjct: 52 ARFAKKDKKAFDYESLQQHGYKA-VGLSDIPAPME---KQDWSWTTGKDKQRVEEVKESYQEREATRAAAVTGGETIANAQLRNDRKNLSFSQKEKKKRDLGQASRGKNYVEEEKRQLRESGVYSGFDS 176
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. Araport11
Match: AT4G04614.1 (| hypothetical protein | Chr4:2327308-2327914 REVERSE LENGTH=176 | 201606) HSP 1 Score: 135.576 bits (340), Expect = 1.199e-40 Identity = 71/129 (55.04%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 41 GKSTKKKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRINKEVEETYEERKKTREA-LSLGEQLPTVLTRNEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRQLRENGVYSGFDA 168 + KK D+E+L+++GYK + +P P E K+DWSW++GK+K+ +EV+E+Y+ER+ TR A ++ GE + RN++KNLSFSQKEK+KR+LGQASRGKNYVEEEKRQLRE+GVYSGFD+ Sbjct: 52 ARFAKKDKKAFDYESLQQHGYKA-VGLSDIPAPME---KQDWSWTTGKDKQRVEEVKESYQEREATRAAAVTGGETIANAQLRNDRKNLSFSQKEKKKRDLGQASRGKNYVEEEKRQLRESGVYSGFDS 176 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.3g063640.2 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.3g063640.2_vfh_v1 ID=Vfaba.Hedin2.R1.3g063640.2_vfh_v1; Name=Vfaba.Hedin2.R1.3g063640.2; organism=Vicia faba; type=mRNA; length=507bpback to top protein sequence of Vfaba.Hedin2.R1.3g063640.2_vfh_v1 >Vfaba.Hedin2.R1.3g063640.2_vfh_v1 ID=Vfaba.Hedin2.R1.3g063640.2_vfh_v1; Name=Vfaba.Hedin2.R1.3g063640.2_vfh_v1; organism=Vicia faba; type=polypeptide; length=168bpback to top mRNA from alignment at chr3:398772662..398774104- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.3g063640.2_vfh_v1 ID=Vfaba.Hedin2.R1.3g063640.2_vfh_v1; Name=Vfaba.Hedin2.R1.3g063640.2; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:398772662..398774104- (Vicia fababack to top |