Vfaba.Hedin2.R1.3g082320.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|B7FMF0|B7FMF0_MEDTR (Sec-independent protein translocase protein TATA OS=Medicago truncatula OX=3880 GN=25484642 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.186e-60 Identity = 102/128 (79.69%), Postives = 113/128 (88.28%), Query Frame = 0 Query: 12 VIP-TKLPIISSSYSNLSFSASNSNTCSLLLKKAKIKTRTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQDIKVSSTKDNV 138 ++P T+LPI SS + SASNSNT SLLLKKA+ +TR+TK FTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIG+TVKSFQQAAKEFETELKKEPN TEEISV ++QE QD KVSSTKD+V Sbjct: 13 ILPRTRLPISSSYSNLSF-SASNSNTTSLLLKKARTRTRSTKRFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEISVTNDQEDQDNKVSSTKDSV 139
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MXB2|A0A2Z6MXB2_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_32880 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.139e-56 Identity = 107/137 (78.10%), Postives = 118/137 (86.13%), Query Frame = 0 Query: 1 MEITLSISSSSVIPTKLPIISSSYSNLSFSASNSNTCSLLLKKAKIKTRTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQDIKVSSTKDN 137 ME TLS+SSSS IP +LPI SS S SF A+N+NT SLLL K ++KTR TK FTC AFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFE ELKKEPN EEISVA+++ +QDIKVSSTKD+ Sbjct: 1 METTLSLSSSSFIP-RLPISSSYSSL-SFLATNANTSSLLLNKGRLKTRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFEIELKKEPNSEEEISVANDKVEQDIKVSSTKDD 135
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XX12|A0A1S2XX12_CICAR (sec-independent protein translocase protein TATA, chloroplastic-like OS=Cicer arietinum OX=3827 GN=LOC101498594 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.052e-54 Identity = 100/137 (72.99%), Postives = 111/137 (81.02%), Query Frame = 0 Query: 1 MEITLSISSSSVIPTKLPIISSSYSNLSFSASNSNTCSLLLKKAKIKTRTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQDIKVSSTKDN 137 ME TLS+ SSVI SS + S SN NT S++LKKA+I +R TK FTC AFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIG+TVKSFQQAAKEFETELKKEPN TEEI V S+QE+QDIKVSSTK++ Sbjct: 1 MEATLSLCCSSVIRRLP---LSSSLSFLASKSNYNT-SVVLKKARISSRRTKGFTCKAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQQAAKEFETELKKEPNSTEEIPVTSDQEEQDIKVSSTKED 133
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4N636|A0A6A4N636_LUPAL (Putative sec-independent protein translocase protein TatA/B/E OS=Lupinus albus OX=3870 GN=Lal_00000157 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.375e-47 Identity = 85/141 (60.28%), Postives = 106/141 (75.18%), Query Frame = 0 Query: 4 TLSISSSSVIPTKLPIISSSYSNLSFSASNSNTCSLLLKKAKIKTRTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPN-----PTEEISVASEQEKQDIKVSS-TKDNV 138 +L++SS IP L + S LSFSASNS S+ ++++I+ RTTKS TCNA FGLGVPEL VIAGVAAL+FGPK LP+VG + G+T+K FQQAAKEFE+EL+KEPN PTEE++ SEQ++QD KVSS KDNV Sbjct: 5 SLTLSSYCSIPKGLHL---SSHQLSFSASNSK-MSITSRRSRIQIRTTKSLTCNALFGLGVPELAVIAGVAALLFGPKNLPQVGSTFGKTIKGFQQAAKEFESELRKEPNSTDETPTEELTAVSEQQEQDTKVSSNNKDNV 141
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2C9VHL9|A0A2C9VHL9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G134600 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 3.675e-46 Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 0 Query: 1 MEITLSISSSSVIPTKLPIISS-----SYSNLSFSASNSNTCSLLLKKAKIKT-RTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPN-----PTEEISVASEQEKQDIKVSSTKDNV 138 MEI+ S S +P LP SS + S LS++A+NS SL+L K + + RT K TCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFE+ELKKEP+ P E+ + SE++KQD++VSS+K+++ Sbjct: 1 MEISSVTLSFSRLPLALPFSSSHSTLFNTSTLSYTANNSINNSLVLGKTRSRNLRTRKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSLSESPGEKPTAVSEEKKQDVEVSSSKESI 149
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A067JIF5|A0A067JIF5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23495 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.709e-44 Identity = 85/146 (58.22%), Postives = 108/146 (73.97%), Query Frame = 0 Query: 3 ITLSISSSSVIPTKLPIISSS---YSNLSF--SASNSNTCSLLLKKAKIKTRTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPN-----PTEEISVASEQEKQDIKVSSTKDNV 138 ITLS+S P LP SS +++++F + NS +L+L K + RT K TCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFE+ELKKEP+ P E+ + SE++KQD+++SSTK++V Sbjct: 6 ITLSLSRP---PLALPFSSSHSTFFNSVTFLNTTKNSGNSALVLGKTRRTQRTAKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPDSLSDSPGEKPTGVSEEKKQDVEISSTKESV 148
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5N5H7S3|A0A5N5H7S3_9ROSA (Sec-independent protein translocase protein TATA OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_023612 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.050e-44 Identity = 78/122 (63.93%), Postives = 98/122 (80.33%), Query Frame = 0 Query: 19 IISSSYSNLSFSASNSNTCSLLLKKAKIKT-RTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNP-TEEISVASEQEKQDIKVSSTKDNV 138 + S+ ++LSFS S N +L+L +++ +T R K TCNA FGLG+PELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFETELKKEP TE + ASE+EKQ+ KV+S+++N Sbjct: 27 LTSNGTTSLSFSKSTVNGSALVLSRSRTRTERAQKGMTCNALFGLGMPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFETELKKEPEGLTETPTAASEEEKQEAKVASSQENA 148
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A540MTQ2|A0A540MTQ2_MALBA (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_012175 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.423e-44 Identity = 78/122 (63.93%), Postives = 97/122 (79.51%), Query Frame = 0 Query: 19 IISSSYSNLSFSASNSNTCSLLLKKAKIKT-RTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEI-SVASEQEKQDIKVSSTKDNV 138 + S+ ++LSFS S N +L+L +++ +T R K TC A FGLG+PELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFETELKKEP EI + ASE+EKQD KV+S+++N Sbjct: 27 LTSNGPTSLSFSKSTVNGSALVLSRSRTRTKRAQKGMTCTALFGLGMPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFETELKKEPEGLTEIPTAASEEEKQDAKVASSQENA 148
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A498K9B3|A0A498K9B3_MALDO (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_015341 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.640e-44 Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 0 Query: 19 IISSSYSNLSFSASNSNTCSLLLKKAKIKT-RTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNP-TEEISVASEQEKQDIKVSSTKDNV 138 + S+ ++LSFS S N +L+L + + +T R K TC A FGLG+PELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFETELKKEP TE + ASE+EKQD KV+S+++N Sbjct: 27 LTSNGTTSLSFSKSTVNGSALVLSRRRTRTERAQKGMTCTALFGLGMPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFETELKKEPEGLTETPTAASEEEKQDAKVASSQENA 148
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4R100|A0A6A4R100_LUPAL (Putative sec-independent protein translocase protein TatA/B/E OS=Lupinus albus OX=3870 GN=Lal_00047714 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.562e-43 Identity = 82/143 (57.34%), Postives = 104/143 (72.73%), Query Frame = 0 Query: 3 ITLSISSSSVIPTKLPIISSSYSNLSFSASN---SNTCSLLLKKAKIKTRTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPT-----EEISVASEQEKQDIKVSSTKDN 137 +TL + S S IP +L SSS S + + + S S++ +K++I+ TKS CNA FGLGVPEL VIAGVAALVFGPK LP+VGRS G+T+KSFQQAAKEFE+ELKKEP+ T EE++ +EQ++QD KVSSTKDN Sbjct: 8 LTLPLHSPSSIPQRLNHSSSSLSFSAINTNRLMKSENMSIITRKSRIQITRTKSLVCNALFGLGVPELAVIAGVAALVFGPKNLPQVGRSFGKTIKSFQQAAKEFESELKKEPSSTNETLAEELTAVTEQQEQDTKVSSTKDN 150
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XH46|TATA_PEA (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum OX=3888 GN=TATA PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.344e-72 Identity = 128/138 (92.75%), Postives = 132/138 (95.65%), Query Frame = 0 Query: 1 MEITLSISSSSVIPTKLPIISSSYSNLSFSASNSNTCSLLLKKAKIKTRTTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQDIKVSSTKDNV 138 MEITLSISSSSVIPT+LP SS YSNLSF +SNSNT SLLLKKA+IKTRTTK FTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQ+IKVSSTKDNV Sbjct: 1 MEITLSISSSSVIPTRLPN-SSCYSNLSFLSSNSNTSSLLLKKARIKTRTTKGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQEIKVSSTKDNV 137
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LKU2|TATA_ARATH (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATA PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.481e-34 Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 0 Query: 35 NTCSLLLKKAKIKTR-TTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPT--EEISVAS---EQEKQDIKVSSTKDNV 138 NT SL+ +I+ T K TCNA FGLGVPEL VIAGVAAL+FGPKKLPE+G+SIG+TVKSFQQAAKEFE+ELK EP + E VA+ E+EK+ SS+K+NV Sbjct: 38 NTRSLVAIGRRIRQEPTRKPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQVATSNKEEEKKTEVSSSSKENV 147
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q75GK3|TATA_ORYSJ (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATA PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.685e-32 Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 56 CNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKE-------PNPTEEISVASEQEKQDIKVSSTKDN 137 C FGLGVPELVVIAGVAALVFGPK+LPE+GRSIG+TVKSFQQAAKEFETELKKE P P E +V+ E+++++ SS+K++ Sbjct: 81 CKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKESDDGGDQPPPPTETAVSDGGEEKELEASSSKES 169
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XFJ8|TATA_MAIZE (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4577 GN=TATA PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 6.328e-31 Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 0 Query: 56 CNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPN------PTEEISVASEQEKQDIKVSSTKDNV 138 C FGLGVPEL VIAGVAALVFGPK+LPE+GRSIG+TVKSFQQAAKEFETELKKEP P + S E++ ++ SS+K++ Sbjct: 82 CKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPGEGGDQPPPATPTAVSGGEEKGLEASSSKESA 170
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q5N2J3|TATA_SYNP6 (Sec-independent protein translocase protein TatA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=tatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.867e-20 Identity = 32/53 (60.38%), Postives = 47/53 (88.68%), Query Frame = 0 Query: 59 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKE 111 FFG+G+PE++VI +A LVFGPKKLPE+GRS+G+ ++ FQ A++EFE+E+K+E Sbjct: 3 FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKRE 55
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q31RR1|TATA_SYNE7 (Sec-independent protein translocase protein TatA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=tatA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.867e-20 Identity = 32/53 (60.38%), Postives = 47/53 (88.68%), Query Frame = 0 Query: 59 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKE 111 FFG+G+PE++VI +A LVFGPKKLPE+GRS+G+ ++ FQ A++EFE+E+K+E Sbjct: 3 FFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKRE 55
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q110N2|TATA_TRIEI (Sec-independent protein translocase protein TatA OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=tatA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.065e-19 Identity = 37/80 (46.25%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 60 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEE---ISVASEQEKQDIKVSSTKD 136 FG+G+PE++VI VA L+FGPKKLPE+GRS+GQ + SF+ A++FE E K+E EE +S ++ + ++ + VSS + Sbjct: 4 FGIGLPEMIVILVVALLIFGPKKLPEIGRSLGQAINSFKAGARDFENEFKREAKHLEEGVKVSTSASEPEKVVDVSSATN 83
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8DJ44|TATA_THEEB (Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tatA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 5.395e-18 Identity = 32/58 (55.17%), Postives = 49/58 (84.48%), Query Frame = 0 Query: 60 FGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEE 117 FG+G+PEL+VI VA L+FGPKKLPE+GRS+G+T ++F++A++EF+ E+K++ EE Sbjct: 4 FGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEE 61
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|A8G311|TATA_PROM2 (Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain MIT 9215) OX=93060 GN=tatA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.780e-14 Identity = 28/59 (47.46%), Postives = 45/59 (76.27%), Query Frame = 0 Query: 59 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEE 117 FG+G+PE+ VI +A L+FGPKKLPE+G+ +G+T+KS ++A+ EF+ E+ + N +E Sbjct: 3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQVMNEEDE 61
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2BPF4|TATA_PROMS (Sec-independent protein translocase protein TatA OS=Prochlorococcus marinus (strain AS9601) OX=146891 GN=tatA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.258e-14 Identity = 31/74 (41.89%), Postives = 51/74 (68.92%), Query Frame = 0 Query: 59 FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPTEEISVASEQEKQDIKVS 132 FG+G+PE+ VI +A L+FGPKKLPE+G+ +G+T+KS ++A+ EF+ E+ + V +EQ+K + +S Sbjct: 3 IFGVGLPEVTVILILALLIFGPKKLPELGKQLGKTLKSLKKASNEFQNEIDQ---------VMNEQDKDESPIS 67
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. Araport11
Match: AT5G28750.1 (| Bacterial sec-independent translocation protein mttA/Hcf106 | Chr5:10784142-10785677 REVERSE LENGTH=147 | 201606) HSP 1 Score: 119.783 bits (299), Expect = 2.538e-35 Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 0 Query: 35 NTCSLLLKKAKIKTR-TTKSFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNPT--EEISVAS---EQEKQDIKVSSTKDNV 138 NT SL+ +I+ T K TCNA FGLGVPEL VIAGVAAL+FGPKKLPE+G+SIG+TVKSFQQAAKEFE+ELK EP + E VA+ E+EK+ SS+K+NV Sbjct: 38 NTRSLVAIGRRIRQEPTRKPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQVATSNKEEEKKTEVSSSSKENV 147
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. Araport11
Match: AT5G52440.1 (| Bacterial sec-independent translocation protein mttA/Hcf106 | Chr5:21286896-21288613 FORWARD LENGTH=260 | 201606) HSP 1 Score: 59.6918 bits (143), Expect = 2.515e-11 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 47 KTRTTKSFTCNA-FFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFE 105 K R KS A FG+G PE +VI VA LVFGPK L EV R++G+T+++FQ +E + Sbjct: 73 KKRRCKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQ 132 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 10
BLAST of Vfaba.Hedin2.R1.3g082320.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.3g082320.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g082320.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g082320.1; organism=Vicia faba; type=mRNA; length=417bpback to top protein sequence of Vfaba.Hedin2.R1.3g082320.1_vfh_v1 >Vfaba.Hedin2.R1.3g082320.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g082320.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g082320.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=138bpback to top mRNA from alignment at chr3:507546908..507547458- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.3g082320.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g082320.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g082320.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:507546908..507547458- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
|