Vfaba.Hedin2.R1.3g082840.1

Transcript Overview
NameVfaba.Hedin2.R1.3g082840.1
Unique NameVfaba.Hedin2.R1.3g082840.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length1746
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:511002576..511004469 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR275Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR302Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL302Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL207Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL286Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0634Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0764Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL260Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL381Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL572Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL636Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL207Pisum sativum Cameor genome v1aPisum sativum
psvfhL555Pisum sativum Cameor genome v1aPisum sativum
psvfhL583Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR183Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL220Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR365Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR390Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhL347Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhL239Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL349Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0431Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0678Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0823Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1138Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR324Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR425Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR325Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR327Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR370Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR402Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL176Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL239Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL159Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL386Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL174Cicer arietinum
carvfhL242Cicer arietinum
ccavfhL235Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL340Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR392Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR512Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR362Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR462Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL528Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL697Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR449Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR462Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL543Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL612Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR338Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR361Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g082840Vfaba.Hedin2.R1.3g082840_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g082840.1_vfh_v1-exonVfaba.Hedin2.R1.3g082840.1_vfh_v1-exon-chr3_vfh_v1:511002576..511003638Vicia fabaexon
Vfaba.Hedin2.R1.3g082840.1_vfh_v1-exonVfaba.Hedin2.R1.3g082840.1_vfh_v1-exon-chr3_vfh_v1:511003787..511004469Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g082840.1_vfh_v1-cdsVfaba.Hedin2.R1.3g082840.1_vfh_v1-cds-chr3_vfh_v1:511002576..511003638Vicia fabaCDS
Vfaba.Hedin2.R1.3g082840.1_vfh_v1-cdsVfaba.Hedin2.R1.3g082840.1_vfh_v1-cds-chr3_vfh_v1:511003787..511004469Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g082840.1_vfh_v1Vfaba.Hedin2.R1.3g082840.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.3g082840.1_vfh_v1Vfaba.Hedin2.R1.3g082840.1_vfh_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N4H4|A0A2K3N4H4_TRIPR (DNA cross-link repair protein snm1-like OS=Trifolium pratense OX=57577 GN=L195_g021176 PE=4 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.210e-122
Identity = 177/186 (95.16%), Postives = 182/186 (97.85%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMV-SLLST 581
            PKQEAVIQFVIDAIQAEAFNP+TLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLL CLEFTEEDMQW TSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEH SFTELKEFVNF+SPNNIIPSVNNDGPESA+AM+ SL+ST
Sbjct:   90 PKQEAVIQFVIDAIQAEAFNPQTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHCSFTELKEFVNFLSPNNIIPSVNNDGPESADAMISSLMST 275
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3N021|A0A2K3N021_TRIPR (DNA cross-link repair protein snm1-like (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g019594 PE=4 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 1.459e-122
Identity = 177/186 (95.16%), Postives = 182/186 (97.85%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMV-SLLST 581
            PKQEAVIQFVIDAIQAEAFNP+TLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLL CLEFTEEDMQW TSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEH SFTELKEFVNF+SPNNIIPSVNNDGPESA+AM+ SL+ST
Sbjct:  114 PKQEAVIQFVIDAIQAEAFNPQTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHCSFTELKEFVNFLSPNNIIPSVNNDGPESADAMISSLMST 299
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P9N3|A0A2K3P9N3_TRIPR (DNA cross-link repair protein snm1-like OS=Trifolium pratense OX=57577 GN=L195_g008629 PE=4 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 3.421e-118
Identity = 177/186 (95.16%), Postives = 182/186 (97.85%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMV-SLLST 581
            PKQEAVIQFVIDAIQAEAFNP+TLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLL CLEFTEEDMQW TSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEH SFTELKEFVNF+SPNNIIPSVNNDGPESA+AM+ SL+ST
Sbjct:  482 PKQEAVIQFVIDAIQAEAFNPQTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHCSFTELKEFVNFLSPNNIIPSVNNDGPESADAMISSLMST 667
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396IZH0|A0A396IZH0_MEDTR (Putative metallo-beta-lactamase, sterile alpha motif/pointed domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0136531 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 5.308e-118
Identity = 175/185 (94.59%), Postives = 181/185 (97.84%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLLST 581
            PKQEAVIQFVIDAIQAEAFNP+TLFLIGSYTIGKERLFLEVARSL +KVYVTAAKLRLL CLEFTEEDMQW TSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGT+IRYEVPYSEH SFTELKEFVNFVSP+NIIPSVNNDGPESA+AMVSL+ST
Sbjct:  490 PKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLHQKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVNFVSPDNIIPSVNNDGPESADAMVSLMST 674
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|G7J953|G7J953_MEDTR (DNA cross-link repair protein pso2/SNM1, putative OS=Medicago truncatula OX=3880 GN=MTR_3g105470 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 5.440e-118
Identity = 175/185 (94.59%), Postives = 181/185 (97.84%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLLST 581
            PKQEAVIQFVIDAIQAEAFNP+TLFLIGSYTIGKERLFLEVARSL +KVYVTAAKLRLL CLEFTEEDMQW TSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGT+IRYEVPYSEH SFTELKEFVNFVSP+NIIPSVNNDGPESA+AMVSL+ST
Sbjct:  487 PKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLHQKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVNFVSPDNIIPSVNNDGPESADAMVSLMST 671
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YAF3|A0A1S2YAF3_CICAR (DNA cross-link repair protein SNM1 OS=Cicer arietinum OX=3827 GN=LOC101494492 PE=4 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 6.297e-113
Identity = 168/185 (90.81%), Postives = 177/185 (95.68%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLLST 581
            PKQEAVIQFVIDAIQAEAFNP+TLFLIGSYTIGKERLFLEVARSLRKKVYVTAAK R+L CLEFTEEDMQW T NEHESNIHVAPMWTLASFKRLK++SSQYASR+SL+VAFSPTGWTFGKGKKKSPGRRWQQGT+IRYEVPYSEH SFTELKE VN +SPNNIIPSVNNDGPESA AMVSL+ST
Sbjct:  492 PKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKYRILKCLEFTEEDMQWFTLNEHESNIHVAPMWTLASFKRLKYLSSQYASRYSLMVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKELVNILSPNNIIPSVNNDGPESAAAMVSLMST 676
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FZF4|A0A371FZF4_MUCPR (DNA cross-link repair protein SNM1 (Fragment) OS=Mucuna pruriens OX=157652 GN=SNM1 PE=4 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 2.279e-111
Identity = 165/184 (89.67%), Postives = 176/184 (95.65%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLLS 580
            PKQEA+IQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKV+VTAAKLRLL CLEF EEDMQW TSNEHESNIH+APMWTLASFKRLKHISSQY  R++LIVAFSPTGWTFGKGKKKSPGRRWQQGT+IRYEVPYSEHSSFTELKEFV  VSP+NIIPSVNNDGP+S++AM+S LS
Sbjct:  497 PKQEAIIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVHVTAAKLRLLKCLEFKEEDMQWFTSNEHESNIHIAPMWTLASFKRLKHISSQYKDRYNLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHSSFTELKEFVKLVSPDNIIPSVNNDGPQSSDAMISQLS 680
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QWL2|A0A4P1QWL2_LUPAN (SAM domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_09868 PE=4 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.103e-110
Identity = 163/183 (89.07%), Postives = 175/183 (95.63%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLL 579
            PKQ+AVIQFVIDAIQAE+FNPKTLFLIGSYTIGKERLFLEVAR+LRKKVYVTAAK+RLL CLEF +EDMQW TSNEHESNIHVAPMWTLASFKRLKH+S QY+SRFSLIVAFSPTGWTFGK KKKSPGRRWQQGT IRYEVPYSEHSSFTEL+EFV  +SP+NIIPSVNNDGPESA+AM+SLL
Sbjct:  508 PKQDAVIQFVIDAIQAESFNPKTLFLIGSYTIGKERLFLEVARALRKKVYVTAAKMRLLKCLEFQDEDMQWFTSNEHESNIHVAPMWTLASFKRLKHVSCQYSSRFSLIVAFSPTGWTFGKDKKKSPGRRWQQGTTIRYEVPYSEHSSFTELQEFVKLISPDNIIPSVNNDGPESADAMISLL 690
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P5N154|A0A6P5N154_ARADU (DNA cross-link repair protein SNM1 isoform X2 OS=Arachis duranensis OX=130453 GN=LOC107470673 PE=4 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.519e-110
Identity = 162/183 (88.52%), Postives = 172/183 (93.99%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLL 579
            PKQEAVIQFVIDAIQAEAFNP+TLFLIGSYTIGKERLFLEVAR+LRKKVYVTAAKLRLL CL F EEDM+W T NEHESNIHVAPMWTLASFKRLKHISSQYA RFSLIVAFSPTGWTFGKGKKKSPGRRWQQGT+IRYEVPYSEH S+ ELKEFV  +SP+NIIPSVNNDGPES +AM+SL+
Sbjct:  412 PKQEAVIQFVIDAIQAEAFNPETLFLIGSYTIGKERLFLEVARTLRKKVYVTAAKLRLLKCLGFREEDMRWFTLNEHESNIHVAPMWTLASFKRLKHISSQYAGRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSYAELKEFVKLISPDNIIPSVNNDGPESVDAMISLM 594
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E4G0|A0A1S3E4G0_CICAR (GRIP and coiled-coil domain-containing protein 2 OS=Cicer arietinum OX=3827 GN=LOC101509519 PE=4 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 3.353e-110
Identity = 211/408 (51.72%), Postives = 266/408 (65.20%), Query Frame = 0 
Query:    1 MNQVWKSFGEVQNLLAKTFFTDLESFRNVEVGLELCMKGYNAPNVVDSSSREERDGILLKSPDNKTGSVYADSWSEFGTTDHYNDNTIIENFHLLGHKLQEFLVEVSSLKERIHTHSSSAREQDKTLSKLMTNIQREITSQRESFEKIKTEVSKRDLQLIALRGNVAHLYESCINSVTVLENRKTELLGEKVEFPDQGINLKAPSFDDEIFEECVKTMADRLLLAANGEDETTKALYASYQVPISEGQNNLQTHASETAFGVSSADASQFGLNHKKSNSNVLLDQGKKKPVFKEKIMSGKLNAQVSGKNRNLNQHSTDSKPMKMK-HPSRSNNTI--KERHVSEEREKQTSEGTRKYIKLKRKTDADQSSSGTPKKSKTEHVPYA-DKQLNPGTGLGKVVPKQEAVIQ 404
            MNQVWK FGEVQNLLAK FFTDLESFR++E  LE CMKG NAP VVDSS  EE  GI  +S DNK  SV+ADSWSEFGT DHYNDNTIIE FHL GH+LQEFLVEVSSLKERI THSS A++QDKTLSKLM+NI+RE+TSQRE+ E +K E+SKRDLQL+ALRGN+ HLYESCINS TVLE  K EL+GEK+EF D GINLK PSFDDE+ EEC+KTMADRL+LAANG        +AS +  +                     DA+Q  +    SN   L  + ++K V +++I +  L  Q+       N +S D + ++M+ H  +    +   ER + E+R K+  +  R   +L+ K  + Q+     K  + E + +A D++      L K   + E V+Q
Sbjct: 2102 MNQVWKGFGEVQNLLAKAFFTDLESFRSLEASLESCMKGNNAPTVVDSSVSEEHSGISRRSSDNKKSSVHADSWSEFGTMDHYNDNTIIETFHLFGHQLQEFLVEVSSLKERICTHSSFAQDQDKTLSKLMSNIKREVTSQREACENMKREISKRDLQLVALRGNITHLYESCINSFTVLEKGKAELVGEKIEFSDLGINLKTPSFDDEMSEECIKTMADRLMLAANG--------FASIKTEV--------------------LDANQKEMKATISN---LQRELQEKDVQRDRICAD-LVKQIKDAEAAANSYSQDLQSLRMQEHNLKEQVEVIEGERKILEQRIKELQDSQRSAAELEDKVRS-QTGLLAAKDQEIEELMHALDEEEMQMEALTKKNAELEKVVQ 2476
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q38961|SNM1_ARATH (DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana OX=3702 GN=SNM1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.179e-28
Identity = 75/209 (35.89%), Postives = 117/209 (55.98%), Query Frame = 0 
Query:  378 HVPYADKQ-LNPGTGLGKVVPKQEAVIQFVI----DAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGK--GKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLL 579
            HV Y D    NP        P +E V+ +V+    D ++ +   PKTL ++GSY+IGKE ++L +A++L  K++  A++ R+L    + +     ST  +  + +HV PM +L   +RL      Y  ++  ++AF PTGWT+ +  G+     +   +G +  Y VPYSEHSSFTEL+EFV F+ P+ IIP+VNN    + E M S  
Sbjct:  279 HVLYLDTTYCNPRYKF----PSKEDVLSYVVRITKDFLRKQ---PKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGK-ATCLHVLPMSSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCF 478
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q5QJC4|DCR1A_CHICK (DNA cross-link repair 1A protein OS=Gallus gallus OX=9031 GN=DCLRE1A PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.708e-26
Identity = 63/171 (36.84%), Postives = 100/171 (58.48%), Query Frame = 0 
Query:  397 PKQEAVIQFVID-AIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQ-QGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVN 565
            P Q+ VIQF ++ A +    NP+TL + G+Y+IGKE++FL +A  L  K  ++  K + L CLE    +    T N   + +H+ PM  + +FK L+   ++++  F  ++AF PTGWT+          + Q +G +  Y +PYSEHSS+ E+K FV ++ P  IIP+VN
Sbjct:  779 PSQQEVIQFAVNTAFEMVTLNPRTLVVCGTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVN-SLITMNWDGTLLHILPMMQI-NFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMDIKPQTRGNITIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 947
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9JIC3|DCR1A_MOUSE (DNA cross-link repair 1A protein OS=Mus musculus OX=10090 GN=Dclre1a PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.427e-26
Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 0 
Query:  397 PKQEAVIQFVID-AIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQ-QGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVN 565
            P Q+ VIQF I+ A +A   NP+ L + G+Y IGKE++FL +A  L  KV ++  K + L CL   E      T++  +S +H+ PM  + +FK L+    +   ++  I+AF PTGWT       +     Q +G +  Y +PYSEHSS+ E+K FV ++ P  IIP+VN
Sbjct:  835 PSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVS-SLITTDMCDSLVHLLPMMQI-NFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTRGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 1003
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6PJP8|DCR1A_HUMAN (DNA cross-link repair 1A protein OS=Homo sapiens OX=9606 GN=DCLRE1A PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 3.408e-25
Identity = 64/171 (37.43%), Postives = 100/171 (58.48%), Query Frame = 0 
Query:  397 PKQEAVIQFVID-AIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFG-KGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVN 565
            P Q+ VI+F I+ A +A   NP  L + G+Y+IGKE++FL +A  L  KV ++  K + L CL   E +    T++   S +H+ PM  + +FK L+    +   +++ I+AF PTGWT   K  + +      +G +  Y +PYSEHSS+ E+K FV ++ P  IIP+VN
Sbjct:  849 PSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEIN-SLITTDMCSSLVHLLPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 1017
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4HPZ9|LIG6_ARATH (DNA ligase 6 OS=Arabidopsis thaliana OX=3702 GN=LIG6 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.346e-22
Identity = 65/184 (35.33%), Postives = 102/184 (55.43%), Query Frame = 0 
Query:  395 VVPKQEAVIQFV---IDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLA--------SFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNND 567
            V P QE  + +V   ID I  E    K LFL+ +Y +GKE++ +E+AR  ++K+ V A K+ +L+ L   EE M   T +E+ES++HV     L         +F ++  I  +    +  +V F PTGWT+ + K+     R++    I   VPYSEHS++ EL+EF+ F+ P  +IP+V  D
Sbjct:  207 VFPSQEESVGYVVSVIDKISEE----KVLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGM--FTEDENESDVHVVGWNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTY-EVKRNKFAVRFKDSMEIHL-VPYSEHSNYDELREFIKFLKPKRVIPTVGVD 380
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q86KS1|DCR1_DICDI (DNA cross-link repair 1 protein OS=Dictyostelium discoideum OX=44689 GN=dclre1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.322e-21
Identity = 64/186 (34.41%), Postives = 97/186 (52.15%), Query Frame = 0 
Query:  395 VVPKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLLS 580
            V P Q  +I+ V   ++ E  + +TLFL G+Y IGKER+ LE+A+   K V+V+  K  +L CL  T  D+   T+NE  +      M  L+    L  + S   +++  ++ F PTGWT  K       R    G    Y V YSEHSSF EL++ ++   P  IIP+V+ D P   + +++  S
Sbjct:  416 VFPPQPEIIKQVASIVRKEN-DGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLS-TCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSS-NNKYKRVIGFRPTGWTQAKKSITYLNR----GPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFS 594
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Match: AT2G45700.1 (| sterile alpha motif (SAM) domain-containing protein | Chr2:18827216-18830505 REVERSE LENGTH=723 | 201606)

HSP 1 Score: 311.227 bits (796), Expect = 8.145e-97
Identity = 145/185 (78.38%), Postives = 165/185 (89.19%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLLST 581
            PKQEAVIQFV++AIQAEAFNPKTLFLIGSYTIGKERLFLEVAR LR+K+Y+  AKL+LL CL F+++D+QW T  E ES+IHV P+WTLASFKRLKH++++Y +R+SLIVAFSPTGWT GK KKKSPGRR QQGT+IRYEVPYSEHSSFTELKEFV  VSP  IIPSVNNDGP+SA AMVSLL T
Sbjct:  539 PKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLASFKRLKHVANRYTNRYSLIVAFSPTGWTSGKTKKKSPGRRLQQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSVNNDGPDSAAAMVSLLVT 723
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Match: AT3G26680.3 (| DNA repair metallo-beta-lactamase family protein | Chr3:9801309-9803517 FORWARD LENGTH=484 | 201606)

HSP 1 Score: 121.709 bits (304), Expect = 3.253e-29
Identity = 75/209 (35.89%), Postives = 117/209 (55.98%), Query Frame = 0 
Query:  378 HVPYADKQ-LNPGTGLGKVVPKQEAVIQFVI----DAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGK--GKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLL 579
            HV Y D    NP        P +E V+ +V+    D ++ +   PKTL ++GSY+IGKE ++L +A++L  K++  A++ R+L    + +     ST  +  + +HV PM +L   +RL      Y  ++  ++AF PTGWT+ +  G+     +   +G +  Y VPYSEHSSFTEL+EFV F+ P+ IIP+VNN    + E M S  
Sbjct:  279 HVLYLDTTYCNPRYKF----PSKEDVLSYVVRITKDFLRKQ---PKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGK-ATCLHVLPMSSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCF 478
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Match: AT3G26680.2 (| DNA repair metallo-beta-lactamase family protein | Chr3:9801309-9803517 FORWARD LENGTH=484 | 201606)

HSP 1 Score: 121.709 bits (304), Expect = 3.253e-29
Identity = 75/209 (35.89%), Postives = 117/209 (55.98%), Query Frame = 0 
Query:  378 HVPYADKQ-LNPGTGLGKVVPKQEAVIQFVI----DAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGK--GKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLL 579
            HV Y D    NP        P +E V+ +V+    D ++ +   PKTL ++GSY+IGKE ++L +A++L  K++  A++ R+L    + +     ST  +  + +HV PM +L   +RL      Y  ++  ++AF PTGWT+ +  G+     +   +G +  Y VPYSEHSSFTEL+EFV F+ P+ IIP+VNN    + E M S  
Sbjct:  279 HVLYLDTTYCNPRYKF----PSKEDVLSYVVRITKDFLRKQ---PKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGK-ATCLHVLPMSSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCF 478
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Match: AT3G26680.1 (| DNA repair metallo-beta-lactamase family protein | Chr3:9801309-9803517 FORWARD LENGTH=484 | 201606)

HSP 1 Score: 121.709 bits (304), Expect = 3.253e-29
Identity = 75/209 (35.89%), Postives = 117/209 (55.98%), Query Frame = 0 
Query:  378 HVPYADKQ-LNPGTGLGKVVPKQEAVIQFVI----DAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGK--GKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNNDGPESAEAMVSLL 579
            HV Y D    NP        P +E V+ +V+    D ++ +   PKTL ++GSY+IGKE ++L +A++L  K++  A++ R+L    + +     ST  +  + +HV PM +L   +RL      Y  ++  ++AF PTGWT+ +  G+     +   +G +  Y VPYSEHSSFTEL+EFV F+ P+ IIP+VNN    + E M S  
Sbjct:  279 HVLYLDTTYCNPRYKF----PSKEDVLSYVVRITKDFLRKQ---PKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGK-ATCLHVLPMSSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCF 478
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Match: AT1G66730.1 (| DNA LIGASE 6 | Chr1:24884991-24891823 FORWARD LENGTH=1396 | 201606)

HSP 1 Score: 106.686 bits (265), Expect = 1.378e-23
Identity = 65/184 (35.33%), Postives = 102/184 (55.43%), Query Frame = 0 
Query:  395 VVPKQEAVIQFV---IDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLA--------SFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKEFVNFVSPNNIIPSVNND 567
            V P QE  + +V   ID I  E    K LFL+ +Y +GKE++ +E+AR  ++K+ V A K+ +L+ L   EE M   T +E+ES++HV     L         +F ++  I  +    +  +V F PTGWT+ + K+     R++    I   VPYSEHS++ EL+EF+ F+ P  +IP+V  D
Sbjct:  207 VFPSQEESVGYVVSVIDKISEE----KVLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGM--FTEDENESDVHVVGWNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTY-EVKRNKFAVRFKDSMEIHL-VPYSEHSNYDELREFIKFLKPKRVIPTVGVD 380
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Match: AT2G45700.2 (| sterile alpha motif (SAM) domain-containing protein | Chr2:18827761-18830505 REVERSE LENGTH=631 | 201606)

HSP 1 Score: 70.0922 bits (170), Expect = 3.070e-12
Identity = 36/52 (69.23%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:  397 PKQEAVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVAR--SLRKKVY 446
            PKQEAVIQFV++AIQAEAFNPKTLFLIGSYTIG     L   R   LR K +
Sbjct:  539 PKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGNMFTLLFPFRYIMLRSKFF 590
[Close]
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Match: AT3G26680.4 (| DNA repair metallo-beta-lactamase family protein | Chr3:9801309-9803051 FORWARD LENGTH=426 | 201606)

HSP 1 Score: 65.0846 bits (157), Expect = 7.741e-11
Identity = 45/141 (31.91%), Postives = 78/141 (55.32%), Query Frame = 0 
Query:  378 HVPYADK-QLNPGTGLGKVVPKQEAVIQFVI----DAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAAKLRLLNCLEFTEEDMQWSTSNEHESN-IHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTG 512
            HV Y D    NP        P +E V+ +V+    D ++ +   PKTL ++GSY+IGKE ++L +A++L  K++  A++ R+L    F  +D+  + S + ++  +HV PM +L   +RL      Y  ++  ++AF PTG
Sbjct:  279 HVLYLDTTYCNPRYKF----PSKEDVLSYVVRITKDFLRKQ---PKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQ--SFGWDDISKNLSTDGKATCLHVLPMSSL-KVERLDEHLKIYREQYGAVLAFRPTG 409
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3N4H4|A0A2K3N4H4_TRIPR1.210e-12295.16DNA cross-link repair protein snm1-like OS=Trifoli... [more]
tr|A0A2K3N021|A0A2K3N021_TRIPR1.459e-12295.16DNA cross-link repair protein snm1-like (Fragment)... [more]
tr|A0A2K3P9N3|A0A2K3P9N3_TRIPR3.421e-11895.16DNA cross-link repair protein snm1-like OS=Trifoli... [more]
tr|A0A396IZH0|A0A396IZH0_MEDTR5.308e-11894.59Putative metallo-beta-lactamase, sterile alpha mot... [more]
tr|G7J953|G7J953_MEDTR5.440e-11894.59DNA cross-link repair protein pso2/SNM1, putative ... [more]
tr|A0A1S2YAF3|A0A1S2YAF3_CICAR6.297e-11390.81DNA cross-link repair protein SNM1 OS=Cicer arieti... [more]
tr|A0A371FZF4|A0A371FZF4_MUCPR2.279e-11189.67DNA cross-link repair protein SNM1 (Fragment) OS=M... [more]
tr|A0A4P1QWL2|A0A4P1QWL2_LUPAN1.103e-11089.07SAM domain-containing protein OS=Lupinus angustifo... [more]
tr|A0A6P5N154|A0A6P5N154_ARADU2.519e-11088.52DNA cross-link repair protein SNM1 isoform X2 OS=A... [more]
tr|A0A1S3E4G0|A0A1S3E4G0_CICAR3.353e-11051.72GRIP and coiled-coil domain-containing protein 2 O... [more]
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BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
sp|Q38961|SNM1_ARATH3.179e-2835.89DNA cross-link repair protein SNM1 OS=Arabidopsis ... [more]
sp|Q5QJC4|DCR1A_CHICK1.708e-2636.84DNA cross-link repair 1A protein OS=Gallus gallus ... [more]
sp|Q9JIC3|DCR1A_MOUSE2.427e-2638.01DNA cross-link repair 1A protein OS=Mus musculus O... [more]
sp|Q6PJP8|DCR1A_HUMAN3.408e-2537.43DNA cross-link repair 1A protein OS=Homo sapiens O... [more]
sp|F4HPZ9|LIG6_ARATH1.346e-2235.33DNA ligase 6 OS=Arabidopsis thaliana OX=3702 GN=LI... [more]
sp|Q86KS1|DCR1_DICDI1.322e-2134.41DNA cross-link repair 1 protein OS=Dictyostelium d... [more]
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BLAST of Vfaba.Hedin2.R1.3g082840.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 7
Match NameE-valueIdentityDescription
AT2G45700.18.145e-9778.38| sterile alpha motif (SAM) domain-containing prot... [more]
AT3G26680.33.253e-2935.89| DNA repair metallo-beta-lactamase family protein... [more]
AT3G26680.23.253e-2935.89| DNA repair metallo-beta-lactamase family protein... [more]
AT3G26680.13.253e-2935.89| DNA repair metallo-beta-lactamase family protein... [more]
AT1G66730.11.378e-2335.33| DNA LIGASE 6 | Chr1:24884991-24891823 FORWARD LE... [more]
AT2G45700.23.070e-1269.23| sterile alpha motif (SAM) domain-containing prot... [more]
AT3G26680.47.741e-1131.91| DNA repair metallo-beta-lactamase family protein... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.12650coord: 395..542
e-value: 2.8E-40
score: 139.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..366
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 396..576
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 466..567
e-value: 2.5E-25
score: 88.9
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 395..564

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.3g082840.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g082840.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g082840.1; organism=Vicia faba; type=mRNA; length=1746bp
ATGAACCAAGTCTGGAAAAGCTTTGGTGAGGTTCAGAATTTACTCGCTAA
GACTTTTTTCACAGATTTGGAATCTTTTCGGAATGTGGAAGTTGGTCTTG
AGTTGTGTATGAAAGGATACAATGCTCCAAATGTGGTGGATTCATCTTCC
AGAGAAGAACGTGATGGTATTTTACTAAAGTCACCTGATAATAAGACGGG
CTCTGTGTATGCAGATTCTTGGTCAGAATTTGGCACGACCGACCACTATA
ATGATAATACCATTATTGAAAATTTTCATCTACTTGGGCATAAACTGCAA
GAGTTTTTGGTGGAGGTCAGCTCTCTTAAGGAAAGAATACACACGCACTC
CAGTTCGGCACGTGAGCAAGACAAAACCCTGTCGAAACTAATGACAAATA
TTCAGAGAGAAATTACTTCCCAAAGAGAATCTTTTGAAAAGATAAAGACA
GAAGTTAGTAAACGAGATCTGCAACTTATTGCATTGCGGGGGAACGTTGC
CCACCTTTATGAATCATGCATCAATTCTGTCACTGTACTAGAGAACAGAA
AAACTGAACTGCTTGGAGAAAAGGTTGAATTTCCAGATCAAGGGATTAAC
TTGAAAGCACCGTCATTTGATGATGAAATATTCGAGGAATGTGTTAAAAC
CATGGCTGATAGACTGCTGTTGGCTGCAAATGGTGAGGATGAGACAACAA
AGGCATTGTATGCTTCATATCAAGTGCCGATTTCTGAGGGTCAAAATAAC
TTGCAAACGCATGCCTCTGAAACTGCATTTGGAGTGAGCTCTGCTGATGC
ATCACAGTTTGGTCTGAATCACAAAAAGTCCAATTCTAACGTGTTGCTTG
ACCAAGGAAAGAAGAAACCTGTTTTTAAGGAAAAGATAATGTCAGGAAAG
CTCAATGCTCAAGTATCAGGAAAAAATAGAAACTTGAATCAACATTCTAC
AGATTCTAAACCAATGAAGATGAAACATCCCAGCAGGTCTAACAACACGA
TAAAAGAGAGACATGTGTCCGAAGAGAGAGAAAAGCAAACAAGTGAAGGT
ACTAGAAAGTATATTAAGTTGAAACGTAAAACAGATGCTGATCAATCTAG
TTCTGGAACTCCTAAGAAATCAAAAACTGAACATGTTCCCTATGCTGATA
AACAACTGAATCCTGGCACGGGCCTTGGGAAGGTTGTTCCAAAACAAGAG
GCTGTAATACAATTTGTTATTGACGCCATTCAAGCAGAAGCTTTTAATCC
CAAGACTCTTTTTCTGATTGGCAGCTATACAATTGGAAAAGAAAGGCTGT
TCTTGGAGGTTGCTCGTTCGCTTCGCAAAAAGGTTTACGTAACTGCAGCA
AAATTACGCCTTTTAAACTGTTTAGAATTTACTGAGGAGGATATGCAGTG
GTCTACTTCAAATGAGCATGAAAGCAATATTCATGTTGCCCCTATGTGGA
CACTCGCAAGCTTCAAAAGATTGAAGCACATATCAAGTCAATATGCGAGT
CGGTTCAGTCTTATAGTTGCTTTCTCTCCTACTGGTTGGACATTTGGCAA
AGGTAAAAAGAAGTCTCCTGGAAGAAGGTGGCAGCAGGGTACTGTTATAA
GGTATGAAGTTCCTTACAGTGAGCATTCCAGCTTTACAGAACTCAAAGAG
TTTGTAAATTTTGTGTCTCCCAATAACATTATACCAAGTGTGAATAATGA
TGGACCAGAATCTGCGGAAGCAATGGTTTCTCTCCTGTCAACTTGA
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protein sequence of Vfaba.Hedin2.R1.3g082840.1_vfh_v1

>Vfaba.Hedin2.R1.3g082840.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g082840.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g082840.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=581bp
MNQVWKSFGEVQNLLAKTFFTDLESFRNVEVGLELCMKGYNAPNVVDSSS
REERDGILLKSPDNKTGSVYADSWSEFGTTDHYNDNTIIENFHLLGHKLQ
EFLVEVSSLKERIHTHSSSAREQDKTLSKLMTNIQREITSQRESFEKIKT
EVSKRDLQLIALRGNVAHLYESCINSVTVLENRKTELLGEKVEFPDQGIN
LKAPSFDDEIFEECVKTMADRLLLAANGEDETTKALYASYQVPISEGQNN
LQTHASETAFGVSSADASQFGLNHKKSNSNVLLDQGKKKPVFKEKIMSGK
LNAQVSGKNRNLNQHSTDSKPMKMKHPSRSNNTIKERHVSEEREKQTSEG
TRKYIKLKRKTDADQSSSGTPKKSKTEHVPYADKQLNPGTGLGKVVPKQE
AVIQFVIDAIQAEAFNPKTLFLIGSYTIGKERLFLEVARSLRKKVYVTAA
KLRLLNCLEFTEEDMQWSTSNEHESNIHVAPMWTLASFKRLKHISSQYAS
RFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTVIRYEVPYSEHSSFTELKE
FVNFVSPNNIIPSVNNDGPESAEAMVSLLST
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mRNA from alignment at chr3:511002576..511004469-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.3g082840.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g082840.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g082840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:511002576..511004469- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011084DRMBL
IPR036866RibonucZ/Hydroxyglut_hydro