Vfaba.Hedin2.R1.3g083040.1

Transcript Overview
NameVfaba.Hedin2.R1.3g083040.1
Unique NameVfaba.Hedin2.R1.3g083040.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length558
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:511977343..511977900 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR275Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR302Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL225Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL302Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL207Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL286Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0634Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0764Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL260Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL381Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL572Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL636Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL207Pisum sativum Cameor genome v1aPisum sativum
psvfhL555Pisum sativum Cameor genome v1aPisum sativum
psvfhL583Pisum sativum Cameor genome v1aPisum sativum
vfhvfhR183Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL220Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR365Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR390Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhL347Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhL239Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL243Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL349Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0431Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0678Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0823Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1138Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR324Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR425Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR325Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR327Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR370Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR402Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL176Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL239Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL159Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL386Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL174Cicer arietinum
carvfhL242Cicer arietinum
ccavfhL235Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL340Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvvaR362Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR462Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL528Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL697Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR449Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR462Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL543Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL612Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR338Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR361Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g146840.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.08G163400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Phvul.007G186600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_15547Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058914554.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_014657572.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr07.1283Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g154400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan10g097000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_03747Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.08G126500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat06G0396200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_08535.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun07g154400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_004495734.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
PvulFLAVERTChr07.1001203Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg3138.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_04021.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_10125.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.3g069080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g083040Vfaba.Hedin2.R1.3g083040_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g083040.1_vfh_v1-exonVfaba.Hedin2.R1.3g083040.1_vfh_v1-exon-chr3_vfh_v1:511977343..511977900Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g083040.1_vfh_v1-cdsVfaba.Hedin2.R1.3g083040.1_vfh_v1-cds-chr3_vfh_v1:511977343..511977900Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.3g083040.1_vfh_v1Vfaba.Hedin2.R1.3g083040.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.3g083040.1_vfh_v1Vfaba.Hedin2.R1.3g083040.1_vfh_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|G7I6W4|G7I6W4_MEDTR (Import inner membrane translocase subunit TIM22 OS=Medicago truncatula OX=3880 GN=11407476 PE=4 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 6.870e-108
Identity = 153/186 (82.26%), Postives = 171/186 (91.94%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLN-IPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSSTNPKDHQ N+RLYHPYQHLN +P+DKLYNLPTSPEHLF E+  RKHRSW +N+QYYTGTGYLSG+IIGG RGT++GL+ AEAGES+K+RVNRVLNSGGQGGRRLGNSLGVLGLIFAGLES M + RDTDDLVNSAVAGLGTG +YKAAAGPRSA IAGA+GGI AAVAVAG+QA KR++PI
Sbjct:    1 MADSSTNPKDHQ-NTRLYHPYQHLNNVPIDKLYNLPTSPEHLFQEDIIRKHRSWGENVQYYTGTGYLSGAIIGGARGTVQGLREAEAGESVKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESGMTYFRDTDDLVNSAVAGLGTGAIYKAAAGPRSAAIAGAVGGIVAAVAVAGRQALKRYVPI 185
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XYS5|A0A1S2XYS5_CICAR (mitochondrial import inner membrane translocase subunit TIM23-1 OS=Cicer arietinum OX=3827 GN=LOC101495533 PE=4 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 2.208e-107
Identity = 158/185 (85.41%), Postives = 168/185 (90.81%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSST P D +  +R YHPYQHLNIP+DKLYNLPTSPEHLF EE  RK RSW DNLQYYTGTGYLSG+IIGGT+GTIEG+KAAE+GESLK+RVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDD VNSAVAGLGTG LYKAAAGPRSA IAGA+GGI AAV VAGKQA KR+IPI
Sbjct:    1 MADSSTIPNDSK--TRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEI-RKRRSWGDNLQYYTGTGYLSGAIIGGTKGTIEGIKAAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKAAAGPRSAAIAGAVGGITAAVVVAGKQALKRYIPI 182
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MXA2|A0A2Z6MXA2_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_32780 PE=4 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 5.950e-105
Identity = 167/185 (90.27%), Postives = 177/185 (95.68%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSS NPKD Q+N+RLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSW DNLQYYTGTGYLSG+IIGG +GT+EGLKAAE+GESLK+RVNRVLNSGGQGGRRLGNSLGVLGLIFAGLES MIH+RDTDDLVNSAVAGLGTG +YKAAAGPRSA IAGA+GGIAAAVAVAGKQA KRHIPI
Sbjct:    1 MADSSINPKD-QQNTRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWGDNLQYYTGTGYLSGAIIGGVKGTVEGLKAAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESGMIHLRDTDDLVNSAVAGLGTGAIYKAAAGPRSAAIAGAIGGIAAAVAVAGKQALKRHIPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3KBK5|A0A2K3KBK5_TRIPR (Mitochondrial import inner membrane translocase subunit TIM23-like protein OS=Trifolium pratense OX=57577 GN=L195_g053206 PE=4 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 1.064e-104
Identity = 167/185 (90.27%), Postives = 175/185 (94.59%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSSTNPKD Q+N+RLYHPYQHLNIPVDKLYNLP SPEHLFPEEASRKHRSW DNLQYYTGTGYLSG+IIGG RGT+EGLKA+E+GESLK+RVNRVLNSGGQGGRR GNSLGVLGLIFAGLES MIH RDTDDLVNSAVAGLGTG LYKAAAGPRSA IAGA+GGIAAAVAVAGKQA KRHIPI
Sbjct:    1 MADSSTNPKD-QQNTRLYHPYQHLNIPVDKLYNLPISPEHLFPEEASRKHRSWGDNLQYYTGTGYLSGAIIGGVRGTVEGLKASESGESLKLRVNRVLNSGGQGGRRFGNSLGVLGLIFAGLESGMIHFRDTDDLVNSAVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAVAVAGKQALKRHIPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V3X9|A0A1S3V3X9_VIGRR (mitochondrial import inner membrane translocase subunit TIM23-2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771580 PE=4 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 9.777e-92
Identity = 144/185 (77.84%), Postives = 164/185 (88.65%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSS+N KD + N+RLYHPYQ L++P+ KLYNLPT+PEHLF EEA+R HRSW DNLQYYTGT YLSG+IIG TRGT++GL+ AE+G+SLKIR+NRVLNSGG  GR+LGNSLGVLGLIFAGLES MIH R TDDLVNSA+AGLGTG LY+AAAGPRSA IAGA+GGIAAA AV GKQA KR+IPI
Sbjct:    1 MADSSSNSKD-KNNTRLYHPYQDLDVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGTAYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARSTDDLVNSAIAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYIPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SQ47|A0A0S3SQ47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G163400 PE=4 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.258e-91
Identity = 145/185 (78.38%), Postives = 164/185 (88.65%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSS+N KD + N+RLYHPY+ LN+P+ KLYNLPT+PEHLF EEA+R HRSW DNLQYYTGT YLSG+IIG TRGT++GL+ AE+G+SLKIR+NRVLNSGG  GR+LGNSLGVLGLIFAGLES MIH R TDDLVNSAVAGLGTG LY+AAAGPRSA IAGA+GGIAAA AV GKQA KR+IPI
Sbjct:    1 MADSSSNSKD-KNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGTAYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYIPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VJC2|A0A0L9VJC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g097000 PE=4 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.258e-91
Identity = 145/185 (78.38%), Postives = 164/185 (88.65%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSS+N KD + N+RLYHPY+ LN+P+ KLYNLPT+PEHLF EEA+R HRSW DNLQYYTGT YLSG+IIG TRGT++GL+ AE+G+SLKIR+NRVLNSGG  GR+LGNSLGVLGLIFAGLES MIH R TDDLVNSAVAGLGTG LY+AAAGPRSA IAGA+GGIAAA AV GKQA KR+IPI
Sbjct:    1 MADSSSNSKD-KNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGTAYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYIPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445INA9|A0A445INA9_GLYSO (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Glycine soja OX=3848 GN=D0Y65_027232 PE=4 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 1.564e-90
Identity = 140/185 (75.68%), Postives = 166/185 (89.73%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSS+N KDH  N+R+YHPYQ LN+P+ KLYNLPT+PEHLFPEEA+R HRSW DNLQYYTG+GYL+G++IG  RGT++GL+ AE+G+SLKIR+NRVLNSGG  GRRLGNSLGV+GLIFAGLES M ++R TDDLVNSAVAGLGTG L++AAAGPRSA IAGA+GGIAAA AV+GKQA KR++PI
Sbjct:    1 MADSSSNSKDHH-NTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGALIGAARGTVQGLREAESGDSLKIRLNRVLNSGGHAGRRLGNSLGVVGLIFAGLESGMTYLRGTDDLVNSAVAGLGTGTLFRAAAGPRSAAIAGAIGGIAAAAAVSGKQALKRYVPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|I1LBK4|I1LBK4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100779163 PE=4 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 1.564e-90
Identity = 140/185 (75.68%), Postives = 166/185 (89.73%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSS+N KDH  N+R+YHPYQ LN+P+ KLYNLPT+PEHLFPEEA+R HRSW DNLQYYTG+GYL+G++IG  RGT++GL+ AE+G+SLKIR+NRVLNSGG  GRRLGNSLGV+GLIFAGLES M ++R TDDLVNSAVAGLGTG L++AAAGPRSA IAGA+GGIAAA AV+GKQA KR++PI
Sbjct:    1 MADSSSNSKDHH-NTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGALIGAARGTVQGLREAESGDSLKIRLNRVLNSGGHAGRRLGNSLGVVGLIFAGLESGMTYLRGTDDLVNSAVAGLGTGTLFRAAAGPRSAAIAGAIGGIAAAAAVSGKQALKRYVPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N611|A0A4D6N611_VIGUN (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2437 PE=4 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.700e-89
Identity = 144/185 (77.84%), Postives = 164/185 (88.65%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MADSS+N KD + N+RLYHPYQ LN+P+ KLYNLPT+PEHLF EEA+R HRSW DNLQYYTGT YLSG+IIG  RGT++GL+ AE+G+SLKIR+NR+LNSGG  GR+LGNSLGVLGLIFAGLES MIH R TDDLVNSA+AGLGTG LY+AAAGPRSA IAGA+GGIAAAVAV GKQA KR+IPI
Sbjct:    1 MADSSSNSKD-KNNTRLYHPYQDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGTAYLSGAIIGAARGTVQGLREAESGDSLKIRLNRILNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARGTDDLVNSAIAGLGTGALYRAAAGPRSAAIAGAIGGIAAAVAVGGKQALKRYIPI 184
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LNQ1|TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.562e-61
Identity = 98/187 (52.41%), Postives = 136/187 (72.73%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDK--LYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MA + ++  +  +N+RLYHPYQ+  +P+    LY LPTSPE LF EE+ ++ RSW +NL +YTGTGYL+GS+ G + G   G+K+ E G++ K+++NR+LNS GQ GR  GN +G++GLI+AG+ES ++ V D DD+  S VAGLGTG +++AA G RSA +AGA GGIAA   VAGKQ FKR+  I
Sbjct:    1 MAINRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAHI 187
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S837|TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.706e-60
Identity = 105/188 (55.85%), Postives = 140/188 (74.47%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNS--RLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDD-LVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MAD   +   HQ+    R Y+PYQ +N+P  KLY LPTSPE LF EEA++K  +W +NL ++TG GY +GS++G  +GTI G++AAE GESLKIR NR+LNSGG   RR GN LG +GL+FA +ES + ++RD DD  + + +AGL TGVLY+AA+GPRSAV+AGA+GG+AA  AVAG++  KR +PI
Sbjct:    1 MADPMNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q38820|TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.674e-58
Identity = 99/187 (52.94%), Postives = 137/187 (73.26%), Query Frame = 0 
Query:    4 SSTNPKDH--QKNSRLYHPYQHLNIPVDK---LYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            ++ N  DH   +N+RLY+PYQ+  +P++K   LY LPTSPE LF EEA R+ RSW +NL +YTGT YL GS+ G + G I G+K+ E+G++ K+++NR+LNS GQ GR  GN +G++GL++AG+ES ++   D DD+  S VAGLGTG + +AA G RSA +AGALGG+AA   VAGKQ  KR++PI
Sbjct:    2 AANNRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYVPI 188
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9USM7|TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim23 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.467e-24
Identity = 60/165 (36.36%), Postives = 88/165 (53.33%), Query Frame = 0 
Query:   19 HPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHI 183
            HP   L+ P+D L     +   L  +  +   R W D+L Y TGT YLSG  IGG  G  EG+K  +   S ++R+N +LN   + G  +GNSLGVL L++ G+ S + + R      NS  AG  TG LYK+  G R+  I+ +L   AA +    K++F + +
Sbjct:   45 HPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYKSTRGLRAMAISSSLVATAAGIWTLAKRSFTKRL 209
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/Swiss-Prot
Match: sp|P32897|TIM23_YEAST (Mitochondrial import inner membrane translocase subunit TIM23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM23 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.512e-12
Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 0 
Query:   11 HQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASR---KHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAV 173
            H   +RL HP   L+  V+ L       E L   E S+     R W D+L Y TG  YL G  IGG  G ++GL+        K+++N VLN   + G  LGN+ G+L L +  + S +  +R   D   S  AG  TG L+K++ G +    + A+  +AAA AV
Sbjct:   52 HVDTARL-HPLAGLDKGVEYL---DLEEEQLSSLEGSQGLIPSRGWTDDLCYGTGAVYLLGLGIGGFSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINSTIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSSAM--VAAACAV 211
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. Araport11
Match: AT1G17530.1 (| translocase of inner mitochondrial membrane 23 | Chr1:6027723-6028286 FORWARD LENGTH=187 | 201606)

HSP 1 Score: 190.66 bits (483), Expect = 5.691e-62
Identity = 98/187 (52.41%), Postives = 136/187 (72.73%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDK--LYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MA + ++  +  +N+RLYHPYQ+  +P+    LY LPTSPE LF EE+ ++ RSW +NL +YTGTGYL+GS+ G + G   G+K+ E G++ K+++NR+LNS GQ GR  GN +G++GLI+AG+ES ++ V D DD+  S VAGLGTG +++AA G RSA +AGA GGIAA   VAGKQ FKR+  I
Sbjct:    1 MAINRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAHI 187
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. Araport11
Match: AT1G17530.2 (| translocase of inner mitochondrial membrane 23 | Chr1:6027723-6028910 FORWARD LENGTH=183 | 201606)

HSP 1 Score: 189.889 bits (481), Expect = 1.200e-61
Identity = 97/183 (53.01%), Postives = 134/183 (73.22%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNSRLYHPYQHLNIPVDK--LYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKR 181
            MA + ++  +  +N+RLYHPYQ+  +P+    LY LPTSPE LF EE+ ++ RSW +NL +YTGTGYL+GS+ G + G   G+K+ E G++ K+++NR+LNS GQ GR  GN +G++GLI+AG+ES ++ V D DD+  S VAGLGTG +++AA G RSA +AGA GGIAA   VAGKQ FKR
Sbjct:    1 MAINRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKR 183
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. Araport11
Match: AT3G04800.1 (| translocase inner membrane subunit 23-3 | Chr3:1314479-1315045 REVERSE LENGTH=188 | 201606)

HSP 1 Score: 189.119 bits (479), Expect = 2.769e-61
Identity = 105/188 (55.85%), Postives = 140/188 (74.47%), Query Frame = 0 
Query:    1 MADSSTNPKDHQKNS--RLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDD-LVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            MAD   +   HQ+    R Y+PYQ +N+P  KLY LPTSPE LF EEA++K  +W +NL ++TG GY +GS++G  +GTI G++AAE GESLKIR NR+LNSGG   RR GN LG +GL+FA +ES + ++RD DD  + + +AGL TGVLY+AA+GPRSAV+AGA+GG+AA  AVAG++  KR +PI
Sbjct:    1 MADPMNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
[Close]
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. Araport11
Match: AT1G72750.1 (| translocase inner membrane subunit 23-2 | Chr1:27383577-27384143 FORWARD LENGTH=188 | 201606)

HSP 1 Score: 183.341 bits (464), Expect = 4.782e-59
Identity = 99/187 (52.94%), Postives = 137/187 (73.26%), Query Frame = 0 
Query:    4 SSTNPKDH--QKNSRLYHPYQHLNIPVDK---LYNLPTSPEHLFPEEASRKHRSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYKAAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI 185
            ++ N  DH   +N+RLY+PYQ+  +P++K   LY LPTSPE LF EEA R+ RSW +NL +YTGT YL GS+ G + G I G+K+ E+G++ K+++NR+LNS GQ GR  GN +G++GL++AG+ES ++   D DD+  S VAGLGTG + +AA G RSA +AGALGG+AA   VAGKQ  KR++PI
Sbjct:    2 AANNRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYVPI 188
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7I6W4|G7I6W4_MEDTR6.870e-10882.26Import inner membrane translocase subunit TIM22 OS... [more]
tr|A0A1S2XYS5|A0A1S2XYS5_CICAR2.208e-10785.41mitochondrial import inner membrane translocase su... [more]
tr|A0A2Z6MXA2|A0A2Z6MXA2_TRISU5.950e-10590.27Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|A0A2K3KBK5|A0A2K3KBK5_TRIPR1.064e-10490.27Mitochondrial import inner membrane translocase su... [more]
tr|A0A1S3V3X9|A0A1S3V3X9_VIGRR9.777e-9277.84mitochondrial import inner membrane translocase su... [more]
tr|A0A0S3SQ47|A0A0S3SQ47_PHAAN1.258e-9178.38Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9VJC2|A0A0L9VJC2_PHAAN1.258e-9178.38Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A445INA9|A0A445INA9_GLYSO1.564e-9075.68Mitochondrial import inner membrane translocase su... [more]
tr|I1LBK4|I1LBK4_SOYBN1.564e-9075.68Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A4D6N611|A0A4D6N611_VIGUN2.700e-8977.84Mitochondrial inner membrane translocase subunit T... [more]
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BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9LNQ1|TI231_ARATH5.562e-6152.41Mitochondrial import inner membrane translocase su... [more]
sp|Q9S837|TI233_ARATH2.706e-6055.85Mitochondrial import inner membrane translocase su... [more]
sp|Q38820|TI232_ARATH4.674e-5852.94Mitochondrial import inner membrane translocase su... [more]
sp|Q9USM7|TIM23_SCHPO1.467e-2436.36Mitochondrial import inner membrane translocase su... [more]
sp|P32897|TIM23_YEAST1.512e-1234.34Mitochondrial import inner membrane translocase su... [more]
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BLAST of Vfaba.Hedin2.R1.3g083040.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G17530.15.691e-6252.41| translocase of inner mitochondrial membrane 23 |... [more]
AT1G17530.21.200e-6153.01| translocase of inner mitochondrial membrane 23 |... [more]
AT3G04800.12.769e-6155.85| translocase inner membrane subunit 23-3 | Chr3:1... [more]
AT1G72750.14.782e-5952.94| translocase inner membrane subunit 23-2 | Chr1:2... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 59..167
e-value: 4.6E-22
score: 78.5
IPR045238Tim23-likePANTHERPTHR15371TIM23coord: 27..173

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.3g083040.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g083040.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g083040.1; organism=Vicia faba; type=mRNA; length=558bp
ATGGCTGATTCTTCAACCAACCCAAAGGATCATCAAAAAAATTCACGTCT
CTATCATCCCTACCAGCACCTCAACATTCCCGTCGACAAGCTCTACAACC
TCCCCACCTCGCCGGAGCATCTCTTCCCAGAAGAAGCTTCCAGAAAGCAC
CGTTCATGGGCCGACAACCTCCAGTACTACACCGGCACCGGCTACCTCTC
GGGTTCCATCATCGGAGGCACAAGAGGAACGATTGAAGGTCTCAAGGCTG
CTGAGGCAGGCGAGTCTCTTAAGATCCGAGTCAACCGTGTTCTTAACTCG
GGTGGTCAAGGTGGTCGTAGACTCGGTAACTCGCTTGGGGTTTTGGGATT
GATTTTTGCAGGATTGGAGAGTGCTATGATTCATGTTAGGGATACGGATG
ACTTGGTTAACAGCGCGGTTGCCGGACTCGGTACCGGAGTACTTTATAAG
GCTGCGGCTGGGCCTCGATCGGCTGTTATTGCTGGTGCTCTAGGTGGAAT
TGCGGCGGCTGTGGCAGTTGCCGGGAAACAAGCTTTTAAACGACACATTC
CAATTTAA
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protein sequence of Vfaba.Hedin2.R1.3g083040.1_vfh_v1

>Vfaba.Hedin2.R1.3g083040.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g083040.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g083040.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=185bp
MADSSTNPKDHQKNSRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKH
RSWADNLQYYTGTGYLSGSIIGGTRGTIEGLKAAEAGESLKIRVNRVLNS
GGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDLVNSAVAGLGTGVLYK
AAAGPRSAVIAGALGGIAAAVAVAGKQAFKRHIPI
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mRNA from alignment at chr3:511977343..511977900+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.3g083040.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g083040.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g083040.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:511977343..511977900+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR045238Tim23-like
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity