Vfaba.Hedin2.R1.4g111720.1

Transcript Overview
NameVfaba.Hedin2.R1.4g111720.1
Unique NameVfaba.Hedin2.R1.4g111720.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length711
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:733842166..733846862 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR379Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR408Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL059Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL232Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvvfhL275Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL560Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL393Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL773Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL894Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL868Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL170Pisum sativum Cameor genome v1aPisum sativum
psvfhL354Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL026Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvfhL140Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL034Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL310Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR466Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR477Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anvfhL0476Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0481Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL866Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0525Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0533Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1002Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR473Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR515Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR534Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR424Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR452Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR443Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR482Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR481Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR515Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL386Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL578Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL635Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL292Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL640Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL764Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL381Cicer arietinum
carvfhL577Cicer arietinum
carvfhL638Cicer arietinum
ccavfhL163Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL563Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL621Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR525Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR563Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR585Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR485Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR496Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL062Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL151Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL288Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR516Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR540Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR564Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL267Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL376Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL848Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR435Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr03.1001531Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014650509.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat4g102200.1Pisum sativum Cameor genome v1aPisum sativum
Psat04G0309600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan01g174400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun03g255500.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_004509331.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_01G02387.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va01G070850.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun03g255500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_26217.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.01G217000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr03.2785Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.01G320200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058911289.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg17203.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_18520.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.4g084880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g111720Vfaba.Hedin2.R1.4g111720_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733842166..733842305Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733842635..733842767Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733843206..733843274Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733843866..733843895Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733844831..733844863Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733845558..733845628Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733845919..733846000Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733846579..733846671Vicia fabaexon
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-exonVfaba.Hedin2.R1.4g111720.1_vfh_v1-exon-chr4_vfh_v1:733846803..733846862Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733842166..733842305Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733842635..733842767Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733843206..733843274Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733843866..733843895Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733844831..733844863Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733845558..733845628Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733845919..733846000Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733846579..733846671Vicia fabaCDS
Vfaba.Hedin2.R1.4g111720.1_vfh_v1-cdsVfaba.Hedin2.R1.4g111720.1_vfh_v1-cds-chr4_vfh_v1:733846803..733846862Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g111720.1_vfh_v1Vfaba.Hedin2.R1.4g111720.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.4g111720.1_vfh_v1Vfaba.Hedin2.R1.4g111720.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YSX0|A0A1S2YSX0_CICAR (uncharacterized protein LOC101501742 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101501742 PE=4 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 5.125e-83
Identity = 131/192 (68.23%), Postives = 157/192 (81.77%), Query Frame = 0
Query:   48 MEESPV---PDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236
            ME+ PV     S++SS+ +TAIGSRFSTLNKSFK ALRS+LTS SKEEF K F +FTN EKD+LHRL+LQ + S HE  +E+F+AICL  ++GA LDAVEEIVEEQ+L+ LFS RSNIVD  E+LS+AKKNEIQHL  MVQLGEE+N+RLRN+LQLLKE SQ+LSG SH +EK + MN NYGAN+S EMHD 
Sbjct:    1 MEKMPVLGSNASSSSSSPSTAIGSRFSTLNKSFKFALRSLLTSCSKEEFFKAFSSFTNTEKDFLHRLFLQVITSLHEDIEEDFDAICLNTQVGATLDAVEEIVEEQDLDLLFSNRSNIVDVAENLSMAKKNEIQHLMHMVQLGEEHNQRLRNQLQLLKEGSQVLSGGSHVVEKVRSMNLNYGANSSDEMHDV 192          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3ED49|A0A1S3ED49_CICAR (uncharacterized protein LOC101501742 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101501742 PE=4 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.607e-81
Identity = 131/193 (67.88%), Postives = 157/193 (81.35%), Query Frame = 0
Query:   48 MEESPV---PDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEK-FKIMNSNYGANNSVEMHDA 236
            ME+ PV     S++SS+ +TAIGSRFSTLNKSFK ALRS+LTS SKEEF K F +FTN EKD+LHRL+LQ + S HE  +E+F+AICL  ++GA LDAVEEIVEEQ+L+ LFS RSNIVD  E+LS+AKKNEIQHL  MVQLGEE+N+RLRN+LQLLKE SQ+LSG SH +EK  + MN NYGAN+S EMHD 
Sbjct:    1 MEKMPVLGSNASSSSSSPSTAIGSRFSTLNKSFKFALRSLLTSCSKEEFFKAFSSFTNTEKDFLHRLFLQVITSLHEDIEEDFDAICLNTQVGATLDAVEEIVEEQDLDLLFSNRSNIVDVAENLSMAKKNEIQHLMHMVQLGEEHNQRLRNQLQLLKEGSQVLSGGSHVVEKQVRSMNLNYGANSSDEMHDV 193          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|G7LB64|G7LB64_MEDTR (Embryo defective 3006 protein, putative OS=Medicago truncatula OX=3880 GN=11440553 PE=4 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.366e-80
Identity = 133/192 (69.27%), Postives = 154/192 (80.21%), Query Frame = 0
Query:   48 MEESPVPDSN----ASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHD 235
            ME+S    SN    +S+TT TAIGSRFSTLNKSFK A+RS+LTS SKEEFV+ F +FTNAEKDYLHRL+LQ + S HE  +E+FEAICLK K+G  LDAVEEIVEEQ+L+ LFS RSNIVD  E+LS AKKNEIQ L  MVQ GEE+N RLRN+LQLLKE SQ+LS  SHAIEK + +N NYGAN+S EMHD
Sbjct:    1 MEKSVAIGSNDASSSSTTTATAIGSRFSTLNKSFKFAIRSLLTSCSKEEFVEAFSSFTNAEKDYLHRLFLQVITSLHEDLEEDFEAICLKTKVGTTLDAVEEIVEEQDLDLLFSNRSNIVDVAENLSAAKKNEIQTLMHMVQSGEEHNRRLRNQLQLLKEGSQVLSDASHAIEKIRSINLNYGANSSDEMHD 192          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|K7MGX6|K7MGX6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786747 PE=4 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.913e-79
Identity = 120/189 (63.49%), Postives = 148/189 (78.31%), Query Frame = 0
Query:   48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236
            ME++P   SNAS   +T IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE  ++ FE +CL+ + GA LDAVEEIVEEQ+L+ LFS RSNI+D  E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLL+E +Q+LSG S A+EKFK MN NYGAN+   +HD 
Sbjct:    1 MEKTPKQGSNASLFPSTGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNTEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEEIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLREGNQVLSGASQAVEKFKSMNVNYGANSGDGIHDV 189          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GHR5|A0A445GHR5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_043492 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 6.561e-78
Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 0
Query:   48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236
            ME++P   SNAS   +T IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE  ++ FE +CL+ + GA LDAVEEIVEEQ+L+ LFS RSNI+D  E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLL+E +Q+LSG S A+EKFK MN NYGA NS + HD 
Sbjct:    1 MEKTPKQGSNASLFPSTGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNTEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEEIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLREGNQVLSGASQAVEKFKSMNVNYGA-NSGDGHDV 188          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LJG8|A0A445LJG8_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_002968 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 7.906e-78
Identity = 119/189 (62.96%), Postives = 147/189 (77.78%), Query Frame = 0
Query:   48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236
            ME+ P   +NAS   +  IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE  ++ FE +CL+ + GA LDAVE+IVEEQ+L+ LFS RSNI+D  E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLLKE +Q+LSG S A+EKFK MN NYGAN+  E+HD 
Sbjct:    1 MEKMPEQGANASLLPSNGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNIEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEKIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLKEGNQVLSGASQAVEKFKSMNLNYGANSGDEIHDV 189          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|I1JCE5|I1JCE5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_02G045600 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 7.906e-78
Identity = 119/189 (62.96%), Postives = 147/189 (77.78%), Query Frame = 0
Query:   48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236
            ME+ P   +NAS   +  IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE  ++ FE +CL+ + GA LDAVE+IVEEQ+L+ LFS RSNI+D  E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLLKE +Q+LSG S A+EKFK MN NYGAN+  E+HD 
Sbjct:    1 MEKMPEQGANASLLPSNGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNIEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEKIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLKEGNQVLSGASQAVEKFKSMNLNYGANSGDEIHDV 189          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|C6SXB7|C6SXB7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.068e-77
Identity = 118/189 (62.43%), Postives = 147/189 (77.78%), Query Frame = 0
Query:   48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236
            ME+ P   +NAS   +  IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE  ++ FE +CL+ + GA LDAVE+IVEEQ+L+ LFS RSNI+D  E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLLKE +Q+LSG S A+E+FK MN NYGAN+  E+HD 
Sbjct:    1 MEKMPEQGANASLLPSNGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNIEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEKIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLKEGNQVLSGASQAVERFKSMNLNYGANSGDEIHDV 189          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FB79|A0A371FB79_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_44555 PE=4 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.048e-75
Identity = 119/188 (63.30%), Postives = 147/188 (78.19%), Query Frame = 0
Query:   48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHD 235
            MEE P   ++AS   +T IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+NAEK+ LHRL+LQ + S HE  ++ FE +CL+ K GA LDAVEEIVEEQ+L+ LFS RSNI D  E+LS+AKKNEIQHL  MVQLGEE+N+ LR+RLQLL+E +Q+LSG S A+EKFK MN NYGA +  ++HD
Sbjct:   84 MEERPEHGASASLLPSTGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNAEKELLHRLFLQVITSLHENLEDGFETVCLQTKAGATLDAVEEIVEEQDLDVLFSDRSNITDIAENLSMAKKNEIQHLMHMVQLGEEHNQMLRSRLQLLREGNQVLSGASQAVEKFKSMNLNYGAYSGDKIHD 271          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MPJ7|A0A2Z6MPJ7_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_209980 PE=4 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.343e-74
Identity = 124/191 (64.92%), Postives = 150/191 (78.53%), Query Frame = 0
Query:   48 MEESPVPDSNASSTTT--TAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236
            ME++PV DS+ +S++   TAIG RFSTLNKSFK ALRS+LTS SKEEF K F +FTN EKD+LHR++LQ          E+FEAICLK ++GA LDAVEEIVEEQ+L+ LFS RSNI D  E+LS AKK+EIQ L  MVQLGEE+N+RLRN+LQLLK+ SQ+LS  SHA+EK K +NSNYGAN+S EM D 
Sbjct:    1 MEKNPVIDSSNASSSANSTAIGYRFSTLNKSFKFALRSLLTSCSKEEFCKAFSSFTNTEKDFLHRIFLQ----------EDFEAICLKTQVGATLDAVEEIVEEQDLDLLFSNRSNIGDVAENLSTAKKDEIQRLMHMVQLGEEHNQRLRNQLQLLKKGSQVLSDASHAVEKIKSINSNYGANSSDEMRDV 181          
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. Araport11
Match: AT4G19350.1 (| embryo defective 3006 | Chr4:10562214-10563676 REVERSE LENGTH=180 | 201606)

HSP 1 Score: 133.65 bits (335), Expect = 6.451e-39
Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 0
Query:   63 TTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNY 225
            T   GSR + L KSFK  LR +LT+ SK++FV  F  F+ AE++ L +LY + + + H+  +EEF+  C + ++G +LD VEE+VEEQ L+PLFS +++++     L+ +KKNEIQ L  ++Q  EE N +   R+ +LK+ +Q LSG +  IEK     S Y
Sbjct:    8 TDIAGSRRTHLKKSFKSTLRHLLTACSKQDFVDIFSKFSGAEQELLFQLYTRVVVNLHQTIEEEFDEQCHETQVGPILDTVEELVEEQSLDPLFSDKTDVMAIAYDLTTSKKNEIQKLTVLLQRAEEQNRQKEARISMLKKQTQDLSGTADRIEKLNAGVSGY 170          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YSX0|A0A1S2YSX0_CICAR5.125e-8368.23uncharacterized protein LOC101501742 isoform X2 OS... [more]
tr|A0A1S3ED49|A0A1S3ED49_CICAR3.607e-8167.88uncharacterized protein LOC101501742 isoform X1 OS... [more]
tr|G7LB64|G7LB64_MEDTR2.366e-8069.27Embryo defective 3006 protein, putative OS=Medicag... [more]
tr|K7MGX6|K7MGX6_SOYBN2.913e-7963.49Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445GHR5|A0A445GHR5_GLYSO6.561e-7864.02Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A445LJG8|A0A445LJG8_GLYSO7.906e-7862.96Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1JCE5|I1JCE5_SOYBN7.906e-7862.96Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|C6SXB7|C6SXB7_SOYBN2.068e-7762.43Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A371FB79|A0A371FB79_MUCPR2.048e-7563.30Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|A0A2Z6MPJ7|A0A2Z6MPJ7_TRISU1.343e-7464.92Uncharacterized protein OS=Trifolium subterraneum ... [more]
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BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G19350.16.451e-3941.72| embryo defective 3006 | Chr4:10562214-10563676 R... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
IPR007128Nuclear MIS12/MIND complex subunit PMF1/Nnf1PANTHERPTHR15459POLYAMINE-MODULATED FACTOR 1coord: 59..214

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.4g111720.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g111720.1; organism=Vicia faba; type=mRNA; length=711bp
ATGGGATTGAAATCCCAAAGCCCAAAGACACTGCCGCTTACAGTTGCATC
GGAAACAAATTTGAATCGCACTGACCTCAACTCGCCGGAAAAAGCTAACG
GAGTCGGTTATCCGCACCCAGAAACAGTGAGAAATTACAGAATGGAGGAA
AGTCCAGTACCTGATTCCAATGCATCATCAACAACTACTACAGCAATTGG
ATCCAGGTTCTCCACTTTGAATAAGTCCTTCAAGGTTGCTCTTCGTTCTA
TGCTAACTTCATCTTCAAAAGAGGAATTTGTTAAAGAATTTCCAACTTTT
ACCAATGCTGAAAAAGATTATCTTCATCGCCTATATCTTCAGGCCATGGA
TTCTTTTCATGAAGCCTTTCAGGAAGAATTTGAAGCAATATGTCTCAAAA
TAAAGATGGGAGCCGTTCTTGATGCTGTAGAGGAAATTGTGGAAGAACAA
GAACTGAATCCTTTGTTTTCAAAGAGGAGTAACATAGTGGATACTGTTGA
AAGTTTGTCTTTGGCAAAGAAGAACGAAATCCAACATTTAAAGTGTATGG
TGCAATTGGGAGAGGAAAATAATGAAAGGCTCCGCAACCGACTGCAACTC
CTTAAAGAAAACAGTCAACTTTTGTCCGGTGTTTCACATGCTATTGAAAA
GTTCAAAATCATGAATTCAAATTATGGGGCCAACAATAGTGTTGAAATGC
ATGATGCATAA
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protein sequence of Vfaba.Hedin2.R1.4g111720.1_vfh_v1

>Vfaba.Hedin2.R1.4g111720.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=236bp
MGLKSQSPKTLPLTVASETNLNRTDLNSPEKANGVGYPHPETVRNYRMEE
SPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTF
TNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQ
ELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQL
LKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA
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mRNA from alignment at chr4:733842166..733846862+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.4g111720.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g111720.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:733842166..733846862+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007128PMF1/Nnf1
Vocabulary: Cellular Component
TermDefinition
GO:0000444MIS12/MIND type complex