Vfaba.Hedin2.R1.4g111720.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YSX0|A0A1S2YSX0_CICAR (uncharacterized protein LOC101501742 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101501742 PE=4 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 5.125e-83 Identity = 131/192 (68.23%), Postives = 157/192 (81.77%), Query Frame = 0 Query: 48 MEESPV---PDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236 ME+ PV S++SS+ +TAIGSRFSTLNKSFK ALRS+LTS SKEEF K F +FTN EKD+LHRL+LQ + S HE +E+F+AICL ++GA LDAVEEIVEEQ+L+ LFS RSNIVD E+LS+AKKNEIQHL MVQLGEE+N+RLRN+LQLLKE SQ+LSG SH +EK + MN NYGAN+S EMHD Sbjct: 1 MEKMPVLGSNASSSSSSPSTAIGSRFSTLNKSFKFALRSLLTSCSKEEFFKAFSSFTNTEKDFLHRLFLQVITSLHEDIEEDFDAICLNTQVGATLDAVEEIVEEQDLDLLFSNRSNIVDVAENLSMAKKNEIQHLMHMVQLGEEHNQRLRNQLQLLKEGSQVLSGGSHVVEKVRSMNLNYGANSSDEMHDV 192
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3ED49|A0A1S3ED49_CICAR (uncharacterized protein LOC101501742 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101501742 PE=4 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 3.607e-81 Identity = 131/193 (67.88%), Postives = 157/193 (81.35%), Query Frame = 0 Query: 48 MEESPV---PDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEK-FKIMNSNYGANNSVEMHDA 236 ME+ PV S++SS+ +TAIGSRFSTLNKSFK ALRS+LTS SKEEF K F +FTN EKD+LHRL+LQ + S HE +E+F+AICL ++GA LDAVEEIVEEQ+L+ LFS RSNIVD E+LS+AKKNEIQHL MVQLGEE+N+RLRN+LQLLKE SQ+LSG SH +EK + MN NYGAN+S EMHD Sbjct: 1 MEKMPVLGSNASSSSSSPSTAIGSRFSTLNKSFKFALRSLLTSCSKEEFFKAFSSFTNTEKDFLHRLFLQVITSLHEDIEEDFDAICLNTQVGATLDAVEEIVEEQDLDLLFSNRSNIVDVAENLSMAKKNEIQHLMHMVQLGEEHNQRLRNQLQLLKEGSQVLSGGSHVVEKQVRSMNLNYGANSSDEMHDV 193
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|G7LB64|G7LB64_MEDTR (Embryo defective 3006 protein, putative OS=Medicago truncatula OX=3880 GN=11440553 PE=4 SV=2) HSP 1 Score: 248.825 bits (634), Expect = 2.366e-80 Identity = 133/192 (69.27%), Postives = 154/192 (80.21%), Query Frame = 0 Query: 48 MEESPVPDSN----ASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHD 235 ME+S SN +S+TT TAIGSRFSTLNKSFK A+RS+LTS SKEEFV+ F +FTNAEKDYLHRL+LQ + S HE +E+FEAICLK K+G LDAVEEIVEEQ+L+ LFS RSNIVD E+LS AKKNEIQ L MVQ GEE+N RLRN+LQLLKE SQ+LS SHAIEK + +N NYGAN+S EMHD Sbjct: 1 MEKSVAIGSNDASSSSTTTATAIGSRFSTLNKSFKFAIRSLLTSCSKEEFVEAFSSFTNAEKDYLHRLFLQVITSLHEDLEEDFEAICLKTKVGTTLDAVEEIVEEQDLDLLFSNRSNIVDVAENLSAAKKNEIQTLMHMVQSGEEHNRRLRNQLQLLKEGSQVLSDASHAIEKIRSINLNYGANSSDEMHD 192
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|K7MGX6|K7MGX6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786747 PE=4 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.913e-79 Identity = 120/189 (63.49%), Postives = 148/189 (78.31%), Query Frame = 0 Query: 48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236 ME++P SNAS +T IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE ++ FE +CL+ + GA LDAVEEIVEEQ+L+ LFS RSNI+D E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLL+E +Q+LSG S A+EKFK MN NYGAN+ +HD Sbjct: 1 MEKTPKQGSNASLFPSTGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNTEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEEIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLREGNQVLSGASQAVEKFKSMNVNYGANSGDGIHDV 189
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GHR5|A0A445GHR5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_043492 PE=4 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 6.561e-78 Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 0 Query: 48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236 ME++P SNAS +T IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE ++ FE +CL+ + GA LDAVEEIVEEQ+L+ LFS RSNI+D E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLL+E +Q+LSG S A+EKFK MN NYGA NS + HD Sbjct: 1 MEKTPKQGSNASLFPSTGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNTEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEEIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLREGNQVLSGASQAVEKFKSMNVNYGA-NSGDGHDV 188
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LJG8|A0A445LJG8_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_002968 PE=4 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 7.906e-78 Identity = 119/189 (62.96%), Postives = 147/189 (77.78%), Query Frame = 0 Query: 48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236 ME+ P +NAS + IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE ++ FE +CL+ + GA LDAVE+IVEEQ+L+ LFS RSNI+D E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLLKE +Q+LSG S A+EKFK MN NYGAN+ E+HD Sbjct: 1 MEKMPEQGANASLLPSNGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNIEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEKIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLKEGNQVLSGASQAVEKFKSMNLNYGANSGDEIHDV 189
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|I1JCE5|I1JCE5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_02G045600 PE=4 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 7.906e-78 Identity = 119/189 (62.96%), Postives = 147/189 (77.78%), Query Frame = 0 Query: 48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236 ME+ P +NAS + IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE ++ FE +CL+ + GA LDAVE+IVEEQ+L+ LFS RSNI+D E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLLKE +Q+LSG S A+EKFK MN NYGAN+ E+HD Sbjct: 1 MEKMPEQGANASLLPSNGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNIEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEKIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLKEGNQVLSGASQAVEKFKSMNLNYGANSGDEIHDV 189
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|C6SXB7|C6SXB7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 2.068e-77 Identity = 118/189 (62.43%), Postives = 147/189 (77.78%), Query Frame = 0 Query: 48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236 ME+ P +NAS + IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+N EK+ LHRL+LQ + S HE ++ FE +CL+ + GA LDAVE+IVEEQ+L+ LFS RSNI+D E+LS+AKKNEIQHLK MVQLGEE+N+ LR RLQLLKE +Q+LSG S A+E+FK MN NYGAN+ E+HD Sbjct: 1 MEKMPEQGANASLLPSNGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNIEKELLHRLFLQVITSLHENLEDGFETVCLQTQAGATLDAVEKIVEEQDLDVLFSDRSNIMDVAENLSMAKKNEIQHLKHMVQLGEEHNQMLRTRLQLLKEGNQVLSGASQAVERFKSMNLNYGANSGDEIHDV 189
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FB79|A0A371FB79_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_44555 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.048e-75 Identity = 119/188 (63.30%), Postives = 147/188 (78.19%), Query Frame = 0 Query: 48 MEESPVPDSNASSTTTTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHD 235 MEE P ++AS +T IGSRFS LNKSFK +LRS+LTS SKEEF K F +F+NAEK+ LHRL+LQ + S HE ++ FE +CL+ K GA LDAVEEIVEEQ+L+ LFS RSNI D E+LS+AKKNEIQHL MVQLGEE+N+ LR+RLQLL+E +Q+LSG S A+EKFK MN NYGA + ++HD Sbjct: 84 MEERPEHGASASLLPSTGIGSRFSNLNKSFKYSLRSLLTSCSKEEFYKAFSSFSNAEKELLHRLFLQVITSLHENLEDGFETVCLQTKAGATLDAVEEIVEEQDLDVLFSDRSNITDIAENLSMAKKNEIQHLMHMVQLGEEHNQMLRSRLQLLREGNQVLSGASQAVEKFKSMNLNYGAYSGDKIHD 271
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MPJ7|A0A2Z6MPJ7_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_209980 PE=4 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.343e-74 Identity = 124/191 (64.92%), Postives = 150/191 (78.53%), Query Frame = 0 Query: 48 MEESPVPDSNASSTTT--TAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNYGANNSVEMHDA 236 ME++PV DS+ +S++ TAIG RFSTLNKSFK ALRS+LTS SKEEF K F +FTN EKD+LHR++LQ E+FEAICLK ++GA LDAVEEIVEEQ+L+ LFS RSNI D E+LS AKK+EIQ L MVQLGEE+N+RLRN+LQLLK+ SQ+LS SHA+EK K +NSNYGAN+S EM D Sbjct: 1 MEKNPVIDSSNASSSANSTAIGYRFSTLNKSFKFALRSLLTSCSKEEFCKAFSSFTNTEKDFLHRIFLQ----------EDFEAICLKTQVGATLDAVEEIVEEQDLDLLFSNRSNIGDVAENLSTAKKDEIQRLMHMVQLGEEHNQRLRNQLQLLKKGSQVLSDASHAVEKIKSINSNYGANSSDEMRDV 181
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. Araport11
Match: AT4G19350.1 (| embryo defective 3006 | Chr4:10562214-10563676 REVERSE LENGTH=180 | 201606) HSP 1 Score: 133.65 bits (335), Expect = 6.451e-39 Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 0 Query: 63 TTAIGSRFSTLNKSFKVALRSMLTSSSKEEFVKEFPTFTNAEKDYLHRLYLQAMDSFHEAFQEEFEAICLKIKMGAVLDAVEEIVEEQELNPLFSKRSNIVDTVESLSLAKKNEIQHLKCMVQLGEENNERLRNRLQLLKENSQLLSGVSHAIEKFKIMNSNY 225 T GSR + L KSFK LR +LT+ SK++FV F F+ AE++ L +LY + + + H+ +EEF+ C + ++G +LD VEE+VEEQ L+PLFS +++++ L+ +KKNEIQ L ++Q EE N + R+ +LK+ +Q LSG + IEK S Y Sbjct: 8 TDIAGSRRTHLKKSFKSTLRHLLTACSKQDFVDIFSKFSGAEQELLFQLYTRVVVNLHQTIEEEFDEQCHETQVGPILDTVEELVEEQSLDPLFSDKTDVMAIAYDLTTSKKNEIQKLTVLLQRAEEQNRQKEARISMLKKQTQDLSGTADRIEKLNAGVSGY 170 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.4g111720.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.4g111720.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g111720.1; organism=Vicia faba; type=mRNA; length=711bpback to top protein sequence of Vfaba.Hedin2.R1.4g111720.1_vfh_v1 >Vfaba.Hedin2.R1.4g111720.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=236bpback to top mRNA from alignment at chr4:733842166..733846862+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.4g111720.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g111720.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g111720.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:733842166..733846862+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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