Vfaba.Hedin2.R1.4g206560.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YPR3|A0A1S2YPR3_CICAR (stress-response A/B barrel domain-containing protein HS1 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101489340 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.318e-61 Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 MAE VKHIVIGKFKD+IS+ER DELIKGYANLVNLIP+MKSFHWG DVS ENLHQG+THVFES+F+SVE IAEYVAHP HVEYANLLLP L+KV+IIDYKPT VNL Sbjct: 1 MAETKETVKHIVIGKFKDEISEERIDELIKGYANLVNLIPTMKSFHWGKDVSGENLHQGYTHVFESTFESVEGIAEYVAHPTHVEYANLLLPSLEKVLIIDYKPTFVNL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LYY6|A0A2K3LYY6_TRIPR (Pop3 peptide OS=Trifolium pratense OX=57577 GN=L195_g039769 PE=4 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 5.979e-59 Identity = 86/109 (78.90%), Postives = 97/109 (88.99%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 MAEA G VKHIV+ KFKD+ S+++ +E IKGYANLVNLIP MKSFHWG D+SAENLHQGFTHVFES+F+SVEAIAEYVAHP HVEYANL L L+KVI+IDYKPTIVNL Sbjct: 1 MAEAKGIVKHIVLAKFKDEFSEQQIEEQIKGYANLVNLIPQMKSFHWGKDISAENLHQGFTHVFESTFESVEAIAEYVAHPAHVEYANLFLSSLEKVIVIDYKPTIVNL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|G7JS72|G7JS72_MEDTR (Stress responsive A/B barrel domain protein OS=Medicago truncatula OX=3880 GN=11441720 PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.065e-58 Identity = 89/102 (87.25%), Postives = 94/102 (92.16%), Query Frame = 0 Query: 8 VKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 VKHIVI KFKD+ISQE+ DELIKGYANLVNLIP MKSFHWGTDVSAENLHQGFTHVFES+F+SVEAIAEYVAHP HVEYANL L L+KVI IDYKPTIVNL Sbjct: 3 VKHIVIAKFKDEISQEKIDELIKGYANLVNLIPPMKSFHWGTDVSAENLHQGFTHVFESNFESVEAIAEYVAHPAHVEYANLFLSNLEKVIAIDYKPTIVNL 104
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TDN5|A0A151TDN5_CAJCA (Stress-response A/B barrel domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_011398 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 6.122e-58 Identity = 82/109 (75.23%), Postives = 95/109 (87.16%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKH+++ KFKDDI+ ER +ELIK YANLVNLIP MKSFHWG D+SAEN+HQGFTHVFES+F+S E +AEYVAHP HVEYANL LPCL+KVI+IDYKPT+V L Sbjct: 1 MEEAKGLVKHVLVAKFKDDITPERIEELIKDYANLVNLIPPMKSFHWGKDLSAENMHQGFTHVFESTFESTEGVAEYVAHPAHVEYANLFLPCLEKVIVIDYKPTVVKL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NIU8|A0A2K3NIU8_TRIPR (Pop3 peptide OS=Trifolium pratense OX=57577 GN=L195_g026250 PE=4 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.523e-57 Identity = 83/109 (76.15%), Postives = 95/109 (87.16%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 MAE G VKHIV+ KFKD+IS+E+ DELIKG+ANLVNLIP MKSFHWG DVSAENLHQGFTHVFE++F+SVEAIAEY AHP HVEYANL + DK++ +DYKPTIVNL Sbjct: 1 MAEVKGIVKHIVLAKFKDEISEEQIDELIKGFANLVNLIPQMKSFHWGKDVSAENLHQGFTHVFETTFESVEAIAEYTAHPSHVEYANLFVASSDKLLAVDYKPTIVNL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|I1JUU1|I1JUU1_SOYBN (Stress-response A/B barrel domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_04G082200 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.797e-56 Identity = 82/109 (75.23%), Postives = 94/109 (86.24%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKH+++ KFKDD++ ER +ELIK YANLVNLIP MKSFHWG DVSAENLHQGFTHVFES+F+S E +AEYVAHP HVEYANL L CL+KVI+IDYKPT+V L Sbjct: 1 MEEAKGVVKHVLLAKFKDDVTPERIEELIKDYANLVNLIPPMKSFHWGKDVSAENLHQGFTHVFESTFESPEGVAEYVAHPAHVEYANLFLSCLEKVIVIDYKPTVVKL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4C2M0|A0A6P4C2M0_ARADU (stress-response A/B barrel domain-containing protein HS1 OS=Arachis duranensis OX=130453 GN=LOC107462560 PE=4 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.043e-56 Identity = 80/109 (73.39%), Postives = 95/109 (87.16%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKHIV+ KFKDDIS ++ +ELI GYANLV+L+PSMK+F WG DVSAEN+HQGFTHVFES+F+S E +AEYVAHP HVEYANL LPCLDKVI+IDYKPT +++ Sbjct: 1 MEEAKGVVKHIVVAKFKDDISPQQIEELINGYANLVSLVPSMKAFQWGKDVSAENMHQGFTHVFESTFESTEGVAEYVAHPAHVEYANLFLPCLDKVIVIDYKPTTLHV 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|C6SXE9|C6SXE9_SOYBN (Stress-response A/B barrel domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.434e-56 Identity = 82/109 (75.23%), Postives = 94/109 (86.24%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKH+++ KFKDD++ ER +ELIK YANLVNLIP MKSFHWG DVSAENLHQGFTHVFES+F+S E +AEYVAHP HVEYANL L CL+KVI+IDYKPT+V L Sbjct: 1 MEEAKGVVKHVLLAKFKDDVTPERIEELIKDYANLVNLIPPMKSFHWGKDVSAENLHQGFTHVFESTFESPEGVAEYVAHPVHVEYANLFLSCLEKVIVIDYKPTVVKL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445AW55|A0A445AW55_ARAHY (Stress-response A/B barrel domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g055425 PE=4 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.477e-55 Identity = 80/109 (73.39%), Postives = 95/109 (87.16%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKHIV+ KFK DIS ++ +ELI GYANLV+L+PSMK+F WG DVSAEN+HQGFTHVFES+F+S E +AEYVAHP HVEYANLLLPCLDKVI+IDYKPT +++ Sbjct: 1 MEEAKGVVKHIVVAKFKYDISPQQIEELINGYANLVSLVPSMKAFQWGKDVSAENMHQGFTHVFESTFESTEGVAEYVAHPAHVEYANLLLPCLDKVIVIDYKPTTLHV 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Match: tr|V7AX63|V7AX63_PHAVU (Stress-response A/B barrel domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G108000g PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 3.198e-55 Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTI 106 M EA G VKHIV+ KFKDDI+ E+ +ELIKGYANLVNL+P MKSFHWGTDVSAENLHQGFTHVFES+F+S E +AEYVAHP HVE+ANL + +KVI+IDYKPTI Sbjct: 1 MEEAKGVVKHIVLAKFKDDITAEKIEELIKGYANLVNLVPPMKSFHWGTDVSAENLHQGFTHVFESTFESTEGVAEYVAHPAHVEFANLFISSTEKVIVIDYKPTI 106
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LUV2|POP3_ARATH (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.586e-51 Identity = 72/109 (66.06%), Postives = 90/109 (82.57%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKH+++ FKD +S E+ +ELIKGYANLVNLI MK+FHWG DVS ENLHQG+TH+FES+F+S EA+AEY+AHP HVE+A + L LDKV++IDYKPT V+L Sbjct: 1 MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/Swiss-Prot
Match: sp|I6WU39|OLIAC_CANSA (Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.685e-30 Identity = 43/97 (44.33%), Postives = 69/97 (71.13%), Query Frame = 0 Query: 8 VKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKP 104 VKH+++ KFKD+I++ + +E K Y NLVN+IP+MK +WG DV+ +N +G+TH+ E +F+SVE I +Y+ HP HV + ++ +K++I DY P Sbjct: 3 VKHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDVTQKNKEEGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTP 99
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FK81|Y5258_ARATH (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana OX=3702 GN=At5g22580 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 9.894e-21 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0 Query: 4 ADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAEN-LHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDY 102 A KH+V+ KFK+D + DE++KG NLV+ I ++KSF WG D + + L QGFTH F +F++ + + +HP HVE++ +DK++++D+ Sbjct: 2 ATSGFKHLVVVKFKEDT---KVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDF 98
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. Araport11
Match: AT3G17210.2 (| heat stable protein 1 | Chr3:5882318-5882896 FORWARD LENGTH=109 | 201606) HSP 1 Score: 160.614 bits (405), Expect = 1.622e-52 Identity = 72/109 (66.06%), Postives = 90/109 (82.57%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKH+++ FKD +S E+ +ELIKGYANLVNLI MK+FHWG DVS ENLHQG+TH+FES+F+S EA+AEY+AHP HVE+A + L LDKV++IDYKPT V+L Sbjct: 1 MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. Araport11
Match: AT3G17210.1 (| heat stable protein 1 | Chr3:5882318-5882896 FORWARD LENGTH=109 | 201606) HSP 1 Score: 160.614 bits (405), Expect = 1.622e-52 Identity = 72/109 (66.06%), Postives = 90/109 (82.57%), Query Frame = 0 Query: 1 MAEADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAENLHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDYKPTIVNL 109 M EA G VKH+++ FKD +S E+ +ELIKGYANLVNLI MK+FHWG DVS ENLHQG+TH+FES+F+S EA+AEY+AHP HVE+A + L LDKV++IDYKPT V+L Sbjct: 1 MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL 109
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. Araport11
Match: AT5G22580.1 (| Stress responsive A/B Barrel Domain-containing protein | Chr5:7502709-7503137 FORWARD LENGTH=111 | 201606) HSP 1 Score: 82.8037 bits (203), Expect = 1.012e-21 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0 Query: 4 ADGRVKHIVIGKFKDDISQERTDELIKGYANLVNLIPSMKSFHWGTDVSAEN-LHQGFTHVFESSFDSVEAIAEYVAHPKHVEYANLLLPCLDKVIIIDY 102 A KH+V+ KFK+D + DE++KG NLV+ I ++KSF WG D + + L QGFTH F +F++ + + +HP HVE++ +DK++++D+ Sbjct: 2 ATSGFKHLVVVKFKEDT---KVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDF 98 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 3
BLAST of Vfaba.Hedin2.R1.4g206560.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.4g206560.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g206560.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g206560.1; organism=Vicia faba; type=mRNA; length=330bpback to top protein sequence of Vfaba.Hedin2.R1.4g206560.1_vfh_v1 >Vfaba.Hedin2.R1.4g206560.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g206560.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g206560.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=109bpback to top mRNA from alignment at chr4:1413068869..1413069331- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.4g206560.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g206560.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g206560.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:1413068869..1413069331- (Vicia fababack to top |