Vfaba.Hedin2.R1.4g241840.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MEV2|A0A2Z6MEV2_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_203380 PE=4 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.233e-92 Identity = 157/213 (73.71%), Postives = 169/213 (79.34%), Query Frame = 0 Query: 1 MAGVVNLRIGGG--PSCILTTSRRSQFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGGWFGW---------SNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 M +VNL IGGG PS + + RSQ TKQL SVD +WSRL KLN+ +FTCLFSD NKREDQARKAL+GALSGKK+E+EKWDKEIKRREE+GGGG GG GG GW SNDDNFW EA QAS TILGIVLIYLLV+KGDLILA IINPLLY LRGVRN FGL TS V KNTSN+DQPDFDG KKE YKSASAKESVVRKWGSD Sbjct: 1 MGAIVNLGIGGGGAPSLSIRSCHRSQLTKQLHSVDNEWSRLQHKLNSKPKFTCLFSD-NKREDQARKALEGALSGKKIEYEKWDKEIKRREELGGGGGGGTNGGGGGWFGWGRWFGWSNDDNFWQEATQASLTILGIVLIYLLVAKGDLILAAIINPLLYALRGVRNSFGLTTSKVLKNTSNSDQPDFDGVLKKEDYKSASAKESVVRKWGSD 212
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|G7JKI8|G7JKI8_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11441440 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.514e-91 Identity = 161/210 (76.67%), Postives = 172/210 (81.90%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRLHQKLNTN-ARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGGWFGW-------SNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 M +VNL +GG PS IL+ SR SVD+KWS LH KLNTN +RFTCLFSD NKREDQARKAL+GALSGKK+EFEKWDKEIKRREE+GGGG GGGGGG + SNDDNFW EAKQAS TILGIVLIYLLV+KGDLILA IINPLLY LRGVRNGFGLAT+ V KNTSN DQPDFDGS KKEGYKSASAKESVVRKWGSD Sbjct: 1 MGAIVNL-VGGVPS-ILSRSRHR-------SVDEKWSCLHHKLNTNRSRFTCLFSDNNKREDQARKALEGALSGKKIEFEKWDKEIKRREELGGGGDGGGGGGGWFGWGRWFGWSNDDNFWQEAKQASLTILGIVLIYLLVAKGDLILAAIINPLLYALRGVRNGFGLATTKVLKNTSNGDQPDFDGSLKKEGYKSASAKESVVRKWGSD 201
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SU30|A0A151SU30_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_004595 PE=4 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.785e-74 Identity = 135/211 (63.98%), Postives = 155/211 (73.46%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSR----RSQFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGGWFGW-----SNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 MA ++NL GG + T + SQ TK DSV+Q WSRL KL N RF CLFS N+RE+QARKAL+GALSGKK EF+KWDKEIKRREE+GGGG GGGG + SNDDNFW EAKQA TILG++L+YLLV+KGDL+LA I NPLLY LRGVRNGF TS V KNTS +++PDFDG SKK YK SAKE+VVRKWGSD Sbjct: 1 MAEILNL---GGLRSLSTRKQSWRSHSQLTKH-DSVNQNWSRLQHKLKCNGRFLCLFSH-NRREEQARKALEGALSGKKNEFDKWDKEIKRREELGGGGDTGGGGWFGWGRRFGWSNDDNFWQEAKQAGLTILGLILVYLLVAKGDLLLAVIFNPLLYTLRGVRNGFSFVTSKVLKNTSTSNEPDFDGLSKKSAYKHISAKENVVRKWGSD 206
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445AY36|A0A445AY36_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g056111 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.514e-70 Identity = 129/208 (62.02%), Postives = 150/208 (72.12%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRL-HQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGG-----WFGWSNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 MAG+VNL P+ ILT S S+ L + + S H L N RF CLFSD N+R++QARKAL+GALSGKK E EKWDKEIKRREE+GGGG GGGG +FGWSNDDNFW EAK AS TILGI L+YLL++KGDL++A I+NPLLY LRGVRNG G TS V KN+S + Q DF G KKE Y+ ASAKE+VVRKW SD Sbjct: 1 MAGIVNL---SPPTPILTFSNSSRHRNHLLTQTKPDSIFDHPALRYNGRFFCLFSD-NRRQEQARKALEGALSGKKNELEKWDKEIKRREELGGGGDAGGGGWFGWGRYFGWSNDDNFWQEAKYASLTILGITLMYLLIAKGDLLVAVILNPLLYALRGVRNGLGFVTSKVLKNSSPSRQHDFGGFFKKEEYQQASAKENVVRKWASD 204
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4BE18|A0A6P4BE18_ARADU (uncharacterized protein LOC107466307 OS=Arachis duranensis OX=130453 GN=LOC107466307 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.890e-69 Identity = 128/208 (61.54%), Postives = 149/208 (71.63%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRL-HQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGG-----WFGWSNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 MAG+VNL P+ ILT S+ L + + S H L N RF CLFSD N+R++QARKAL+GALSGKK E EKWDKEIKRREE+GGGG GGGG +FGWSNDDNFW EAK AS TILGI L+YLL++KGDL++A I+NPLLY LRGVRNG G TS V KN+S + Q DF G KKE Y+ ASAKE+VVRKW SD Sbjct: 1 MAGIVNL---SPPTPILTFRNSSRHRNHLLTQTKPDSIFDHPALRYNGRFFCLFSD-NRRQEQARKALEGALSGKKNELEKWDKEIKRREELGGGGDAGGGGWFGWGRYFGWSNDDNFWQEAKYASLTILGITLMYLLIAKGDLLVAVILNPLLYALRGVRNGLGFVTSKVLKNSSPSRQHDFGGFFKKEEYQQASAKENVVRKWASD 204
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|V7C744|V7C744_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G083700g PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 2.325e-69 Identity = 129/212 (60.85%), Postives = 150/212 (70.75%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRS-----QFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGGWFGW-----SNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 MA ++NL G PS L+T + S F K +S+ Q WS L L RF CLFSD N++E+QARKAL+GALSGKK EF+KWDKEIKRREE+GGGG GGGG + SNDDNFW EAKQA TIL + L+YLLV+KGDL LA I+NPLLY LRGVRNGF TS V KNTS ++Q DFDG SKK+ Y+ SAKE VVRKWGSD Sbjct: 1 MAEILNL--GAPPS--LSTRKHSCRSHSHFIKH-ESISQSWSSLQHSLKCKGRFLCLFSD-NRKEEQARKALEGALSGKKNEFDKWDKEIKRREELGGGGDSGGGGWFGWGRRFGWSNDDNFWQEAKQAGLTILALFLVYLLVAKGDLFLAIILNPLLYALRGVRNGFSFITSKVLKNTSTSNQADFDGLSKKKSYQQTSAKEKVVRKWGSD 206
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|I1KNI8|I1KNI8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100787644 PE=4 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.713e-69 Identity = 126/207 (60.87%), Postives = 151/207 (72.95%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGGWFGW-----SNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 MA L +GG PS + R+ + S Q W+ L KL N RF CLFSD N++E+QARKAL+GALSGKK EF+KWDKEIKRREE+GGGG GGGG + SNDDNFW EAKQA TILG+V++YLL++KGD++LA I NPLLY LRGVRNGFG +S V KNTS ++QPDFDG SKK+ Y+ SAKE+VVRKWGSD Sbjct: 1 MAVAEILNLGGPPS---LSGRKLPPCR---SNSQNWTCLQHKLKCNGRFLCLFSD-NRKEEQARKALEGALSGKKNEFDKWDKEIKRREELGGGGDTGGGGWFGWGRWFGWSNDDNFWQEAKQAILTILGLVVVYLLIAKGDMLLAVIFNPLLYALRGVRNGFGFISSKVLKNTSTSNQPDFDGLSKKKAYQHTSAKENVVRKWGSD 200
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2R3Q2|A0A0B2R3Q2_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_019081 PE=4 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.713e-69 Identity = 126/207 (60.87%), Postives = 151/207 (72.95%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGGWFGW-----SNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 MA L +GG PS + R+ + S Q W+ L KL N RF CLFSD N++E+QARKAL+GALSGKK EF+KWDKEIKRREE+GGGG GGGG + SNDDNFW EAKQA TILG+V++YLL++KGD++LA I NPLLY LRGVRNGFG +S V KNTS ++QPDFDG SKK+ Y+ SAKE+VVRKWGSD Sbjct: 1 MAVAEILNLGGPPS---LSGRKLPPCR---SNSQNWTCLQHKLKCNGRFLCLFSD-NRKEEQARKALEGALSGKKNEFDKWDKEIKRREELGGGGDTGGGGWFGWGRWFGWSNDDNFWQEAKQAILTILGLVVVYLLIAKGDMLLAVIFNPLLYALRGVRNGFGFISSKVLKNTSTSNQPDFDGLSKKKAYQHTSAKENVVRKWGSD 200
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445EKZ6|A0A445EKZ6_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g000722 PE=4 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.168e-68 Identity = 127/208 (61.06%), Postives = 149/208 (71.63%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRL-HQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGG-----WFGWSNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 +AG+VNL P+ ILT S+ L + + S H L N RF CLFSD N+R++QARKAL+GALSGKK E EKWDKEIKRREE+GGGG GGGG +FGWSNDDNFW EAK AS TILGI L+YLL++KGDL++A I+NPLLY LRGVRNG G TS V KN+S + Q DF G KKE Y+ ASAKE+VVRKW SD Sbjct: 9 VAGIVNL---SPPTPILTFRNSSRHRNHLLTQTKPDSIFDHPALRYNGRFFCLFSD-NRRQEQARKALEGALSGKKNELEKWDKEIKRREELGGGGDAGGGGWFGWGRYFGWSNDDNFWQEAKYASLTILGITLMYLLIAKGDLLVAVILNPLLYALRGVRNGLGFVTSKVLKNSSPSRQHDFGGFFKKEEYQQASAKENVVRKWASD 212
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YNT8|A0A1S2YNT8_CICAR (uncharacterized protein LOC101511371 OS=Cicer arietinum OX=3827 GN=LOC101511371 PE=4 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.832e-68 Identity = 150/213 (70.42%), Postives = 165/213 (77.46%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTS-----RRSQFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREEVGGGGTGGGGGGWFGW------SNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKSASAKESVVRKWGSD 202 M +VNL G G IL+T+ SQ TK LDSV KW+RLH L +NARF CLFS+ NKR++QARKAL+GALSGKK EFEKW KEIK+REE+GG G GGGGWFGW SNDDNFW EAKQAS TILGI+LIYLLV+KGDLILA IINPLLY LRGVRNGFGL TS V KNTSN DQPDFD K+GYKSASAKE+VVRKWGSD Sbjct: 1 MGEIVNL--GRGGPLILSTTIWSCRSHSQLTK-LDSVHTKWTRLHHTLYSNARFVCLFSN-NKRQEQARKALEGALSGKKNEFEKWGKEIKKREELGGDAGGSGGGGWFGWGRWFGWSNDDNFWQEAKQASLTILGIILIYLLVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFD---LKKGYKSASAKENVVRKWGSD 206
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. Araport11
Match: AT5G20130.1 (| sulfate adenylyltransferase subunit | Chr5:6797485-6798700 FORWARD LENGTH=202 | 201606) HSP 1 Score: 138.272 bits (347), Expect = 5.679e-41 Identity = 94/209 (44.98%), Postives = 125/209 (59.81%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREE-----VGGGGTGGGGGGWFGWSNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKS--ASAKESVVRKWGSD 202 M V L I S L R T +SV +S + RF+CLFS N+RE+QARK+L+ AL GKK EFEKWDKEIK+REE G GG GGG G GW + D+FW EA+Q +FT+L I+ +Y++V+KG+++ A ++NPLLY LRG R G S +S + G + +E +K ++AKESVVRKWGSD Sbjct: 1 MGHVTRLLINPSSSSPLLHLRCCHRTLDPNSV---FSLRTSITKSKGRFSCLFSGGNQREEQARKSLESALGGKKNEFEKWDKEIKKREESGGGNGGKGGGGGGWFGGGGWFSGDHFWKEAQQIAFTLLAILAVYMVVAKGEVMAAFVLNPLLYALRGTREGL----SSLSSKLMGREASKVSGDNSEEMWKKEGSTAKESVVRKWGSD 202
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. Araport11
Match: AT5G20130.2 (| sulfate adenylyltransferase subunit | Chr5:6797398-6798700 FORWARD LENGTH=231 | 201606) HSP 1 Score: 137.502 bits (345), Expect = 2.576e-40 Identity = 94/209 (44.98%), Postives = 125/209 (59.81%), Query Frame = 0 Query: 1 MAGVVNLRIGGGPSCILTTSRRSQFTKQLDSVDQKWSRLHQKLNTNARFTCLFSDKNKREDQARKALDGALSGKKVEFEKWDKEIKRREE-----VGGGGTGGGGGGWFGWSNDDNFWHEAKQASFTILGIVLIYLLVSKGDLILATIINPLLYGLRGVRNGFGLATSGVSKNTSNNDQPDFDGSSKKEGYKS--ASAKESVVRKWGSD 202 M V L I S L R T +SV +S + RF+CLFS N+RE+QARK+L+ AL GKK EFEKWDKEIK+REE G GG GGG G GW + D+FW EA+Q +FT+L I+ +Y++V+KG+++ A ++NPLLY LRG R G S +S + G + +E +K ++AKESVVRKWGSD Sbjct: 30 MGHVTRLLINPSSSSPLLHLRCCHRTLDPNSV---FSLRTSITKSKGRFSCLFSGGNQREEQARKSLESALGGKKNEFEKWDKEIKKREESGGGNGGKGGGGGGWFGGGGWFSGDHFWKEAQQIAFTLLAILAVYMVVAKGEVMAAFVLNPLLYALRGTREGL----SSLSSKLMGREASKVSGDNSEEMWKKEGSTAKESVVRKWGSD 231 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.4g241840.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.4g241840.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g241840.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g241840.1; organism=Vicia faba; type=mRNA; length=609bpback to top protein sequence of Vfaba.Hedin2.R1.4g241840.1_vfh_v1 >Vfaba.Hedin2.R1.4g241840.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g241840.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g241840.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=202bpback to top mRNA from alignment at chr4:1635501839..1635502851+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.4g241840.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g241840.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g241840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:1635501839..1635502851+ (Vicia fababack to top |