Vfaba.Hedin2.R1.4g242440.1

Transcript Overview
NameVfaba.Hedin2.R1.4g242440.1
Unique NameVfaba.Hedin2.R1.4g242440.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length645
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:1640667652..1640668296 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR369Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR397Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL071Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL233Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL052Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL631Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0087Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0482Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL080Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL397Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL889Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL576Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL084Pisum sativum Cameor genome v1aPisum sativum
psvfhL299Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL030Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL038Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL312Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR478Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR514Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL083Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL259Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0247Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0435Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL827Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0579Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0848Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR465Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR522Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR455Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR478Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR479Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR446Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR464Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvfhL051Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL564Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL164Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL295Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL043Cicer arietinum
carvfhL564Cicer arietinum
ccavfhL172Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL695Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR527Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR611Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR470Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR524Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL065Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL536Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR517Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR590Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL378Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL548Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR445Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR476Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun06g156900.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va09G054840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan09g195300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.003G082200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_05G00727.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014662551.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_09365Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014652888.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigan.05G089000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.01G383100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va01G100550.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
XM_058872120.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat04G0013600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.01G544300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun03g443200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.model.Chr03.1079Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr06.1001649Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_004486140.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg39084.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_22003.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr06.1633Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004507602.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_02257.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_03398Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_19465.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_27195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_00676Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.05G070700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_004577Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058915945.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigun03g443200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat01G0483500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun06g156900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat1g177600.1Pisum sativum Cameor genome v1aPisum sativum
Cc_v2.0_28115.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.006G145000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg48606.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_02541.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cr_22190.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vum_01G04140.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat4g005200.1Pisum sativum Cameor genome v1aPisum sativum
LR48_mrnaVigan01g322800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_017256Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.1g367880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.4g186400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.1g448520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g242440Vfaba.Hedin2.R1.4g242440_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g242440.1_vfh_v1-exonVfaba.Hedin2.R1.4g242440.1_vfh_v1-exon-chr4_vfh_v1:1640667652..1640668296Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g242440.1_vfh_v1-cdsVfaba.Hedin2.R1.4g242440.1_vfh_v1-cds-chr4_vfh_v1:1640667652..1640668296Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.4g242440.1_vfh_v1Vfaba.Hedin2.R1.4g242440.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.4g242440.1_vfh_v1Vfaba.Hedin2.R1.4g242440.1_vfh_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|G7JKF7|G7JKF7_MEDTR (Putative transcription factor C2H2 family OS=Medicago truncatula OX=3880 GN=11446421 PE=4 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 7.917e-108
Identity = 173/226 (76.55%), Postives = 181/226 (80.09%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQD---PNP-DP-------SSSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTT-TTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLR QRE+RT+LGLLTEQMD  DS TTRRRSLKERFRFTG+G CCGATWVFRPIIRHEHH Q+ +        EGEA VEQQ+        PNP +P       SS SGMNLAAALAAERQMR SEE  GGE ATPWRVSLMKLLEETE E+ES     V EGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRSQRESRTILGLLTEQMDALDSGTTRRRSLKERFRFTGMG-CCGATWVFRPIIRHEHHHQRNE--------EGEATVEQQQQLQVQDQDPNPVEPECEAPAGSSGSGMNLAAALAAERQMRVSEEASGGEGATPWRVSLMKLLEETEGENESNAGAVVVEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 217
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JT98|A0A2K3JT98_TRIPR (RING/U-box domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g050318 PE=4 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 1.622e-105
Identity = 164/221 (74.21%), Postives = 174/221 (78.73%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNP------DPSSS-SGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLRPQREART+LGLLTEQMDG D  T+RRRSLKERFRF G+G CCGATWVFRPIIRHE  ++  +                   QVQDPNP      +P SS SGMNLA ALAAERQMRGSEE  GGE  TPWRVSLMKLLEE EVE+ESTT    EG+D+VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRPQREARTILGLLTEQMDGVDLGTSRRRSLKERFRFIGMG-CCGATWVFRPIIRHEREREATE-------------------QVQDPNPVEPECVNPGSSGSGMNLATALAAERQMRGSEEASGGEGGTPWRVSLMKLLEEKEVENESTTV---EGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 198
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LHM0|A0A2Z6LHM0_TRISU (RING-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_203200 PE=4 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 5.307e-97
Identity = 161/221 (72.85%), Postives = 170/221 (76.92%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNP------DPSSS-SGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLRPQREART+LGLLTEQMDG D+ TTRRRSLKER RFTG+G CCGATWVFRPIIRH+  QQ  +R  E    E          QVQDPNP      +P SS SGMNLA ALAAERQMRGSEET  GE  T WRVSLMKLLE      +     V EG+D+VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRPQREARTILGLLTEQMDGLDTGTTRRRSLKERLRFTGMG-CCGATWVFRPIIRHQ--QQGDERVTEREATE----------QVQDPNPVEPECVNPGSSGSGMNLATALAAERQMRGSEETSSGEGGTTWRVSLMKLLE-----EKEVENEVVEGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 203
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445K2D0|A0A445K2D0_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_019069 PE=4 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 2.785e-85
Identity = 145/225 (64.44%), Postives = 156/225 (69.33%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNPDPS-------SSSGMNLAAALAAERQMRGSEETGGGERA----TPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLR +RE RT+LGLLTEQMDG D +  RRR+LKER RFTGIG CCGATWVFRPI+R E    Q  +QQ  A               QDPNP+ S       S + MNLAAALAAERQ+R  E  G G R     TP RVSLM+LLEETE            G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIG-CCGATWVFRPIVREEGGGAQAHQQQTNA--------------AQDPNPNGSEYVSPSPSGTSMNLAAALAAERQLRDGE--GEGRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGV-GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|I1KNH8|I1KNH8_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=106799504 PE=4 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 3.582e-85
Identity = 146/225 (64.89%), Postives = 156/225 (69.33%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNP-DPS------SSSGMNLAAALAAERQMRGSEETGGGERA----TPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLR +RE RT+LGLLTEQMDG D +  RRR+LKER RFTGIG CCGATWVFRPI+R E    Q  +QQ  A               QDPNP DP       S + MNLAAALAAERQ+R  E  G G R     TP RVSLM+LLEETE            G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIG-CCGATWVFRPIVREEGGGAQAHQQQTNA--------------AQDPNPNDPKYVSPSPSGTSMNLAAALAAERQLRDGE--GEGRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGV-GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371F6B2|A0A371F6B2_MUCPR (RING-type domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_46491 PE=4 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 1.943e-81
Identity = 150/229 (65.50%), Postives = 161/229 (70.31%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNPD-----------PSSSSGMNLAAALAAERQMRGSEET---GGGE-RATPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLR +REART+LGLLTEQMDG D    RRR+LKER RF    GCCGATWVFR  +R E   QQ Q+QQ+   G             QDPNP+             S SGMNLAAALAAERQ R S ET   G GE R TPWRVSLM+LLEET VE+E        G+DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRNEREARTILGLLTEQMDGVDGGQRRRRTLKERLRF----GCCGATWVFRHTVRDEGRNQQHQQQQQTNAG-------------QDPNPNGPDCVGPSPSPSPSGSGMNLAAALAAERQFRESHETDAIGEGEARGTPWRVSLMRLLEETAVEAEKGGAV---GNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 209
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445G0K8|A0A445G0K8_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_044527 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 3.737e-80
Identity = 142/215 (66.05%), Postives = 152/215 (70.70%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNPDPS-SSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLR +REART+LGLLTEQMD       RRR+LKER RFTGIG CCGATWVFRPI+R E    Q Q+Q +E       N  Q        +  PS SSSGMNLAAALAAERQ R  E        TP RVSLM+LLEETE    +       G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIG-CCGATWVFRPIVRDEGGGAQAQQQPQET------NAGQDPNHTGPEHVGPSQSSSGMNLAAALAAERQFREGE-------GTPLRVSLMRLLEETEGGDAAVEAV---GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|I1MR22|I1MR22_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100792613 PE=4 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 3.737e-80
Identity = 142/215 (66.05%), Postives = 152/215 (70.70%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNPDPS-SSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ESLR +REART+LGLLTEQMD       RRR+LKER RFTGIG CCGATWVFRPI+R E    Q Q+Q +E       N  Q        +  PS SSSGMNLAAALAAERQ R  E        TP RVSLM+LLEETE    +       G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIG-CCGATWVFRPIVRDEGGGAQAQQQPQET------NAGQDPNHTGPEHVGPSQSSSGMNLAAALAAERQFREGE-------GTPLRVSLMRLLEETEGGDAAVEAV---GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YP08|A0A1S2YP08_CICAR (E3 ubiquitin-protein ligase COP1 OS=Cicer arietinum OX=3827 GN=LOC101490848 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.376e-78
Identity = 152/221 (68.78%), Postives = 170/221 (76.92%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNP-DP------SSSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLGLIL ES   QREART+LGLLT+QMD  D+ T RRR+LKERFRFTGIG CCGATWVFRP++RHEH QQ++  ++             Q+L VQDP+P +P       S SGMNLAAALAAERQMRG EE   GE  TPWRVSLM+LLEET        T V EG+DSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNRS+LEILDIF
Sbjct:    1 MSQLGLILQES---QREARTILGLLTQQMDAVDTRTRRRRTLKERFRFTGIG-CCGATWVFRPVLRHEHQQQEEATEE-------------QQLPVQDPDPVEPECVGPGPSGSGMNLAAALAAERQMRGPEE---GE--TPWRVSLMRLLEET-----EVETAVEEGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGSCPLCNRSVLEILDIF 194
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S3U7|A0A0S3S3U7_PHAAN (RING-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G089000 PE=4 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 5.098e-78
Identity = 134/223 (60.09%), Postives = 154/223 (69.06%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFR--PIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNPDPSSSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTTTTVTE-------GSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLG++L ESL  QRE RT+LGLL++QMDG +S   RR+S KERF F GIG CCGATW FR   +   +  QQQQ   QE   G+G            D     ++ SGMNLAAALAAERQ+RG +E  G    TPWRVSLM+LLEE+E    +      E       G+DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG+CPLCNRSILEILDIF
Sbjct:    1 MSQLGVVLQESL--QREPRTILGLLSDQMDGVESGARRRKSFKERFGFMGIG-CCGATWGFRSDALSFTQGEQQQQANHQETDPGQGSG---------LDCVDQGAAGSGMNLAAALAAERQIRGPQEEVGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKGDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 211
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT4G03965.1 (| RING/U-box superfamily protein | Chr4:1889576-1890205 FORWARD LENGTH=209 | 201606)

HSP 1 Score: 182.57 bits (462), Expect = 5.003e-58
Identity = 110/226 (48.67%), Postives = 132/226 (58.41%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNPDPSSSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEET-------EVESESTTTTVTE-----GSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLG+   ++     ++ T L LL  QMDG D S  R+R+LKER  F  IG CCG TW  R                    GE +    +  L     +     + GMNLA ALAAER  R +EET      TP +VSLM+LLEET       E E+E  T + +       +DSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNR I+EILDI+
Sbjct:    1 MSQLGVETSQAQPETPQSTTFLDLLRLQMDGLDRSRRRKRTLKERLGFKRIG-CCGPTWGLR---------------LTSNTGEDDDEPFENRLVSGSDHVTGPLNQGMNLATALAAERNYR-TEETEASGSLTPLKVSLMRLLEETAERVVVEENETERVTASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT4G22250.1 (| RING/U-box superfamily protein | Chr4:11767685-11768329 REVERSE LENGTH=214 | 201606)

HSP 1 Score: 181.415 bits (459), Expect = 1.537e-57
Identity = 109/207 (52.66%), Postives = 123/207 (59.42%), Query Frame = 0 
Query:   21 LLGLLTEQMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDP---NPDPSSSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEET----------EVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
             L LL  QM G D  T R+R+LKER RF  IG CCG TW  R       H    +            + E +ELQ++       D  S +GMNLA AL AER  RG E T      TP RVSLM+LLEET          E E  + +     G+DSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG+CPLCNR I+EILDIF
Sbjct:   23 FLDLLRRQMSGHDL-TRRKRTLKERLRFKCIG-CCGPTWNLRLTNNTTLHSPTSR------------DDEIEELQIETGLVLESDHGSGTGMNLATALEAERYNRG-ESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT1G62370.1 (| RING/U-box superfamily protein | Chr1:23072575-23073189 FORWARD LENGTH=204 | 201606)

HSP 1 Score: 149.058 bits (375), Expect = 5.153e-45
Identity = 95/222 (42.79%), Postives = 131/222 (59.01%), Query Frame = 0 
Query:    1 MSQLGLILHESLRPQREARTLLGLLTE--QMDGADSSTTRRRSLKERFRFTGIGGCCGATWVFR------PIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPNPDPSSSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            MSQLG +L ES    R  RT++  L E  Q++G D + ++  +LK+R RF  +G CCG     R      PI+  +   +++ + Q     +     E   L         +  S  NLA ALA ER    +EE    E A   +V LM+LL E++   +STTT +  G+D +CCVCMGR+KGAAFIPCGHT+CRVCSRE+W+NRG CPLCNRSI ++LD++
Sbjct:    1 MSQLGDLLRESEDGTRSERTMMMSLLEEDQINGGDRTMSKWTTLKQRLRFDWVG-CCGKPLTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGTELDCL---------TRGSTRNLAEALAEERLAHVTEE----ETAVT-KVPLMRLLAESD-GCDSTTTWL--GNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT3G25030.3 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=210 | 201606)

HSP 1 Score: 123.635 bits (309), Expect = 5.557e-35
Identity = 72/151 (47.68%), Postives = 92/151 (60.93%), Query Frame = 0 
Query:   75 QRQQEEARGEGEANVEQQELQVQDPNPDPSSSSG-MNLAAALAAERQMRGSEETGGGERAT-PWRVSLMKLLEETEV---------ESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            QR+   +R +      +++L+++    + SS  G + L A LA ER +   EE    ER   P R+SLM+LLEE E          E+E     VT    S CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:   64 QREHRHSRDKTAWKSLREKLRLKQ---EASSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEIS-CCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 210
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT3G25030.4 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 122.865 bits (307), Expect = 2.556e-34
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 0 
Query:  109 MNLAAALAAERQMRGSEETGGGERAT-PWRVSLMKLLEETEV---------ESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            + L A LA ER +   EE    ER   P R+SLM+LLEE E          E+E     VT    S CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEIS-CCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT3G25030.2 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 122.865 bits (307), Expect = 2.556e-34
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 0 
Query:  109 MNLAAALAAERQMRGSEETGGGERAT-PWRVSLMKLLEETEV---------ESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            + L A LA ER +   EE    ER   P R+SLM+LLEE E          E+E     VT    S CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEIS-CCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT3G25030.1 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 122.865 bits (307), Expect = 2.556e-34
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 0 
Query:  109 MNLAAALAAERQMRGSEETGGGERAT-PWRVSLMKLLEETEV---------ESESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            + L A LA ER +   EE    ER   P R+SLM+LLEE E          E+E     VT    S CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEIS-CCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT4G13100.9 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606)

HSP 1 Score: 109.383 bits (272), Expect = 5.724e-29
Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:  109 MNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEET-----------EVESES--------TTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            + L   LAAER           E   P R+SLM+LLE+            EVE E             VT  ++  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF
Sbjct:  146 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT4G13100.8 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606)

HSP 1 Score: 109.383 bits (272), Expect = 5.724e-29
Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:  109 MNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEET-----------EVESES--------TTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            + L   LAAER           E   P R+SLM+LLE+            EVE E             VT  ++  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF
Sbjct:  146 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
[Close]
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Match: AT4G13100.7 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606)

HSP 1 Score: 109.383 bits (272), Expect = 5.724e-29
Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:  109 MNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEET-----------EVESES--------TTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 214
            + L   LAAER           E   P R+SLM+LLE+            EVE E             VT  ++  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF
Sbjct:  146 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7JKF7|G7JKF7_MEDTR7.917e-10876.55Putative transcription factor C2H2 family OS=Medic... [more]
tr|A0A2K3JT98|A0A2K3JT98_TRIPR1.622e-10574.21RING/U-box domain-containing protein OS=Trifolium ... [more]
tr|A0A2Z6LHM0|A0A2Z6LHM0_TRISU5.307e-9772.85RING-type domain-containing protein OS=Trifolium s... [more]
tr|A0A445K2D0|A0A445K2D0_GLYSO2.785e-8564.44RING-type domain-containing protein OS=Glycine soj... [more]
tr|I1KNH8|I1KNH8_SOYBN3.582e-8564.89RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A371F6B2|A0A371F6B2_MUCPR1.943e-8165.50RING-type domain-containing protein (Fragment) OS=... [more]
tr|A0A445G0K8|A0A445G0K8_GLYSO3.737e-8066.05RING-type domain-containing protein OS=Glycine soj... [more]
tr|I1MR22|I1MR22_SOYBN3.737e-8066.05RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A1S2YP08|A0A1S2YP08_CICAR3.376e-7868.78E3 ubiquitin-protein ligase COP1 OS=Cicer arietinu... [more]
tr|A0A0S3S3U7|A0A0S3S3U7_PHAAN5.098e-7860.09RING-type domain-containing protein OS=Vigna angul... [more]
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BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.4g242440.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT4G03965.15.003e-5848.67| RING/U-box superfamily protein | Chr4:1889576-18... [more]
AT4G22250.11.537e-5752.66| RING/U-box superfamily protein | Chr4:11767685-1... [more]
AT1G62370.15.153e-4542.79| RING/U-box superfamily protein | Chr1:23072575-2... [more]
AT3G25030.35.557e-3547.68| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.42.556e-3456.03| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.22.556e-3456.03| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.12.556e-3456.03| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT4G13100.95.724e-2948.80| RING/U-box superfamily protein | Chr4:7636547-76... [more]
AT4G13100.85.724e-2948.80| RING/U-box superfamily protein | Chr4:7636547-76... [more]
AT4G13100.75.724e-2948.80| RING/U-box superfamily protein | Chr4:7636547-76... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 163..208
e-value: 1.8E-11
score: 43.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..87
NoneNo IPR availablePANTHERPTHR46629OS01G0917900 PROTEINcoord: 7..214
NoneNo IPR availableCDDcd16449RING-HCcoord: 166..203
e-value: 1.24328E-8
score: 47.4805
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 157..211
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 158..213
e-value: 4.1E-13
score: 50.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 166..204
score: 10.851695

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.4g242440.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g242440.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g242440.1; organism=Vicia faba; type=mRNA; length=645bp
ATGAGTCAACTCGGTCTCATATTACACGAATCGCTCCGTCCTCAAAGAGA
AGCAAGAACCTTACTCGGTTTACTAACAGAACAAATGGACGGTGCAGATT
CATCAACTACAAGAAGACGTAGTCTGAAAGAACGGTTCAGATTCACCGGT
ATCGGTGGTTGCTGTGGTGCCACCTGGGTTTTCCGTCCAATTATCAGACA
CGAGCACCACCAACAACAACAACAACGACAACAAGAGGAAGCAAGAGGAG
AAGGAGAAGCTAATGTGGAGCAACAAGAATTACAGGTTCAAGATCCGAAT
CCGGATCCGTCTAGCTCTTCTGGGATGAATCTTGCGGCGGCATTGGCGGC
GGAGCGTCAGATGAGAGGTTCGGAGGAAACTGGCGGCGGCGAAAGAGCGA
CGCCGTGGAGAGTTTCGTTGATGAAACTGTTGGAGGAAACGGAAGTGGAA
AGTGAGAGTACGACGACGACGGTTACGGAGGGGAGTGATTCGGTGTGCTG
CGTGTGCATGGGAAGGAAGAAAGGTGCAGCGTTCATACCGTGTGGACACA
CTTTTTGTAGAGTGTGTTCAAGGGAACTGTGGTTGAATCGAGGGAACTGT
CCCCTTTGTAATCGTTCTATTCTTGAGATTCTCGATATTTTCTGA
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protein sequence of Vfaba.Hedin2.R1.4g242440.1_vfh_v1

>Vfaba.Hedin2.R1.4g242440.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g242440.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g242440.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=214bp
MSQLGLILHESLRPQREARTLLGLLTEQMDGADSSTTRRRSLKERFRFTG
IGGCCGATWVFRPIIRHEHHQQQQQRQQEEARGEGEANVEQQELQVQDPN
PDPSSSSGMNLAAALAAERQMRGSEETGGGERATPWRVSLMKLLEETEVE
SESTTTTVTEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNC
PLCNRSILEILDIF
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mRNA from alignment at chr4:1640667652..1640668296-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.4g242440.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g242440.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g242440.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:1640667652..1640668296- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING