Vfaba.Hedin2.R1.5g129040.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LNB2|A0A2Z6LNB2_TRISU (Cupin_3 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_336100 PE=4 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 2.786e-71 Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSSSLPSC 113 MASDSNSNLRITIERNP+QSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVS+AVDKYYKFESSSSSSS PSC Sbjct: 1 MASDSNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFESSSSSSS----PSC 109
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7X519|A0A3Q7X519_CICAR (uncharacterized protein LOC101492959 OS=Cicer arietinum OX=3827 GN=LOC101492959 PE=4 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.722e-69 Identity = 104/109 (95.41%), Postives = 106/109 (97.25%), Query Frame = 0 Query: 5 SNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSSSLPSC 113 SNSNLRITIERNP+QSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVS+AVDKYYKFESSSSSSSS PSC Sbjct: 3 SNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFESSSSSSSS---PSC 108
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XVB7|A0A1S2XVB7_CICAR (uncharacterized protein LOC101511860 OS=Cicer arietinum OX=3827 GN=LOC101511860 PE=4 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.006e-67 Identity = 99/105 (94.29%), Postives = 103/105 (98.10%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSS 105 MA DSNSNLRI+IE NPT+SRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE+SSSS+ Sbjct: 1 MAEDSNSNLRISIESNPTESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEASSSST 105
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|G7KYK0|G7KYK0_MEDTR (Putative rmlC-like jelly roll protein OS=Medicago truncatula OX=3880 GN=11428229 PE=4 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.198e-67 Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 0 Query: 7 SNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSSSLPSC 113 S+LRITIERNP+QSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSS PSC Sbjct: 3 SDLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSS--PSC 107
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V4E6|A0A1S3V4E6_VIGRR (uncharacterized protein LOC106771538 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771538 PE=4 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.233e-66 Identity = 97/106 (91.51%), Postives = 101/106 (95.28%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSS 106 MASDSNSNLRITIERNP +SRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAY KGSS+FVEFG GDLVTIPKGL CTWDVSVAVDK+YKFES+ SSSS Sbjct: 1 MASDSNSNLRITIERNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGVGDLVTIPKGLHCTWDVSVAVDKHYKFESTPSSSS 106
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VLH1|A0A072VLH1_MEDTR (Putative rmlC-like jelly roll protein OS=Medicago truncatula OX=3880 GN=25484187 PE=4 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.607e-66 Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSS 103 MASDSNSNLRITIE NP++ RLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSS+FVEFGAGDLVTIPKGLSCTWDVS+AVDKYYKFE+SSS Sbjct: 1 MASDSNSNLRITIESNPSEPRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSEFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFEASSS 103
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MR10|A0A2Z6MR10_TRISU (Cupin_3 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_29840 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.148e-65 Identity = 95/104 (91.35%), Postives = 100/104 (96.15%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSS 104 MASDSNSNLRI IE NP++SRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVK YTK SS+FVEFGAGDLVTIPKGLSCTWDVS+AVDKYYKFE+SSSS Sbjct: 1 MASDSNSNLRINIESNPSESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKVYTKESSEFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFEASSSS 104
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SRG5|A0A0S3SRG5_PHAAN (Cupin_3 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G214000 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.211e-65 Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSS 106 MASDSNSNLRITIE NP +SRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAY KGSS+FVEFG GDLVTIPKGL CTWDVSVAVDK+YKFES+ SSSS Sbjct: 1 MASDSNSNLRITIESNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGVGDLVTIPKGLHCTWDVSVAVDKHYKFESTPSSSS 106
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TXR2|A0A0L9TXR2_PHAAN (Cupin_3 domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g144600 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.211e-65 Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSS 106 MASDSNSNLRITIE NP +SRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAY KGSS+FVEFG GDLVTIPKGL CTWDVSVAVDK+YKFES+ SSSS Sbjct: 1 MASDSNSNLRITIESNPPESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGVGDLVTIPKGLHCTWDVSVAVDKHYKFESTPSSSS 106
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Match: tr|I1JPA0|I1JPA0_SOYBN (Cupin_3 domain-containing protein OS=Glycine max OX=3847 GN=100793722 PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.228e-64 Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 99 MA+DSNSNLRITIERNP+QSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYL+KGKVKAY KGSS+FVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE Sbjct: 1 MAADSNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 99
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. Araport11
Match: AT3G04300.1 (| RmlC-like cupins superfamily protein | Chr3:1140318-1140723 FORWARD LENGTH=96 | 201606) HSP 1 Score: 142.895 bits (359), Expect = 1.396e-45 Identity = 63/95 (66.32%), Postives = 76/95 (80.00%), Query Frame = 0 Query: 9 LRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSS 103 + I IE NP+ RL++L + WPKW C PGKY L F+ ETCYL+KGKVK Y KGSS+FVEFGAGDLVTIPKGLSCTWDVS+ +DK+YKF+ +S Sbjct: 1 MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSLFIDKHYKFDPPTS 95
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. Araport11
Match: AT4G28703.1 (| RmlC-like cupins superfamily protein | Chr4:14166365-14166798 FORWARD LENGTH=107 | 201606) HSP 1 Score: 134.806 bits (338), Expect = 3.784e-42 Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 0 Query: 5 SNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDF---------VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESS 101 ++ N RI +E+NP+Q+RL EL K WPKWGCSPGKY LK++AEE CY+L+GKVK Y K VEFGAGD+VT PKGLSCTWDVS++VDK+Y F SS Sbjct: 2 ADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKPPPSSSSDAEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIFLSS 107
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. Araport11
Match: AT4G10300.1 (| RmlC-like cupins superfamily protein | Chr4:6384564-6385946 FORWARD LENGTH=134 | 201606) HSP 1 Score: 132.109 bits (331), Expect = 9.712e-41 Identity = 57/99 (57.58%), Postives = 74/99 (74.75%), Query Frame = 0 Query: 1 MASDSNSNLRITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 99 + ++S L ITIE+NP +S+L +L ++ WPKWGC P K+ + A+ETCYLL+GKVK Y GS + VE AGD V PKG+SCTWDVSVAVDK+Y+FE Sbjct: 36 IRAESTEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. Araport11
Match: AT4G10280.1 (| RmlC-like cupins superfamily protein | Chr4:6375220-6375996 REVERSE LENGTH=140 | 201606) HSP 1 Score: 73.1738 bits (178), Expect = 1.659e-17 Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 0 Query: 11 ITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKG---SSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 100 + I R + ++LA+L + WPKW +P K+ +F ET Y ++GKVK G + E G GD+V PK + W+++ AV K Y E Sbjct: 48 VKILRQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEGKVKVNVDGYDEEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQYSLEE 140
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. Araport11
Match: AT4G10290.1 (| RmlC-like cupins superfamily protein | Chr4:6379958-6381720 REVERSE LENGTH=120 | 201606) HSP 1 Score: 60.8474 bits (146), Expect = 6.668e-13 Identity = 33/99 (33.33%), Postives = 49/99 (49.49%), Query Frame = 0 Query: 11 ITIERNPTQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSS---DFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSS 106 + + R + ++LAEL + W W P K+ KF ET Y ++GK+K + + +EF AGDLV P+ ++ DV V K Y ES S Sbjct: 20 VKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKVKVEDHHKEGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRYYRESEIEESE 118 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g129040.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g129040.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g129040.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g129040.1; organism=Vicia faba; type=mRNA; length=342bpback to top protein sequence of Vfaba.Hedin2.R1.5g129040.1_vfh_v1 >Vfaba.Hedin2.R1.5g129040.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g129040.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g129040.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=113bpback to top mRNA from alignment at chr5:897583225..897583672+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g129040.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g129040.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g129040.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:897583225..897583672+ (Vicia fababack to top |