Vfaba.Hedin2.R1.5g154640.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|I3SWW4|I3SWW4_MEDTR (Cytochrome b561 and DOMON domain-containing protein OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.579e-30 Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0 Query: 5 TSTRLVPSLD------IQPNNRKLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 TS R +P L KLDIAFRH GIT ++W +WAINPN+DL SSMNG QALVAI QSSG+ +AYTSSI N T+LAESNISY HS L ATH N E I Sbjct: 41 TSCRDLPQLTSYLHWTYDQTTGKLDIAFRHKGITDTNRWVAWAINPNNDLASSMNGAQALVAILQSSGTPKAYTSSIANSRTQLAESNISYPHSGLIATHENNEVTI 147
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|G7IP86|G7IP86_MEDTR (Cytochrome b561 and DOMON domain-containing protein OS=Medicago truncatula OX=3880 GN=11407481 PE=4 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.932e-30 Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0 Query: 5 TSTRLVPSLD------IQPNNRKLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 TS R +P L KLDIAFRH GIT ++W +WAINPN+DL SSMNG QALVAI QSSG+ +AYTSSI N T+LAESNISY HS L ATH N E I Sbjct: 41 TSCRDLPQLTSYLHWTYDQTTGKLDIAFRHKGITDTNRWVAWAINPNNDLASSMNGAQALVAILQSSGTPKAYTSSIANSRTQLAESNISYPHSGLIATHENNEVTI 147
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5P0V6|A0A6A5P0V6_LUPAL (Cytochrome b561 and DOMON domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00043137 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.415e-29 Identity = 58/85 (68.24%), Postives = 67/85 (78.82%), Query Frame = 0 Query: 21 KLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 KLDIAFRH GITS DKW SWAINPN+DL S+M G QALVAI Q+SG+ R YTSSI N+GT LAE NISY ++ L+AT+ N E I Sbjct: 60 KLDIAFRHTGITSTDKWVSWAINPNNDLGSAMLGAQALVAIPQASGAPRVYTSSISNYGTSLAEGNISYPNTGLTATYQNSELTI 144
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QWL1|A0A4P1QWL1_LUPAN (Cytochrome b561 and DOMON domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_27170 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.199e-29 Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = 0 Query: 21 KLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 KLDIAFRH GI+S DKW SWAINPN+DL S+M G QALVAI Q+SG+ R YTSSI N+GT LAE NISY ++ L+AT+ N E I Sbjct: 60 KLDIAFRHTGISSTDKWVSWAINPNNDLNSAMPGAQALVAIPQASGAPRVYTSSISNYGTSLAEGNISYPNTGLTATYENSELTI 144
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S3X0|A0A0S3S3X0_PHAAN (DOMON domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G092300 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.336e-28 Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 0 Query: 21 KLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 KLD+AFRHAGI ++D+W +WAINPN++L S+M G QALVAI++S G+ RAYT S+ + T+LAE NISY HS L+AT N E I Sbjct: 60 KLDMAFRHAGINASDRWVAWAINPNNNLDSAMVGAQALVAISESGGAPRAYTCSVQGYSTQLAEGNISYPHSGLTATRQNSEITI 144
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VE43|A0A0L9VE43_PHAAN (DOMON domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g198400 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.336e-28 Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 0 Query: 21 KLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 KLD+AFRHAGI ++D+W +WAINPN++L S+M G QALVAI++S G+ RAYT S+ + T+LAE NISY HS L+AT N E I Sbjct: 60 KLDMAFRHAGINASDRWVAWAINPNNNLDSAMVGAQALVAISESGGAPRAYTCSVQGYSTQLAEGNISYPHSGLTATRQNSEITI 144
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XAD9|A0A1S2XAD9_CICAR (Cytochrome b561 and DOMON domain-containing protein OS=Cicer arietinum OX=3827 GN=LOC101496998 PE=4 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.544e-28 Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 0 Query: 21 KLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 KLDIAFRH GITS +KW +WAINP DL+ SM G QALVAI QSSG + YTSSI + T+L +SNIS++HS+L+ATH NGE I Sbjct: 62 KLDIAFRHTGITSTNKWVAWAINPKSDLSQSMVGAQALVAIPQSSGVPKVYTSSISGYSTQLTQSNISFTHSRLTATHQNGEITI 146
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|V7BNV3|V7BNV3_PHAVU (DOMON domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G142200g PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.607e-28 Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 0 Query: 5 TSTRLVPSLD------IQPNNRKLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 TS R +P L N KLD+AFRHAGI ++D+W +WAINPN++L S+M G QALVAI++S G+ RAYTSSI + T+LAE NISY+ S L AT N E I Sbjct: 38 TSCRDLPQLTSYLHWTYDQNTAKLDMAFRHAGINASDRWVAWAINPNNNLNSAMVGAQALVAISESGGAPRAYTSSIQGYSTQLAEGNISYAISSLRATRQNSEITI 144
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5PDX8|A0A6A5PDX8_LUPAL (Cytochrome b561 and DOMON domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00043995 PE=4 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.060e-27 Identity = 56/85 (65.88%), Postives = 67/85 (78.82%), Query Frame = 0 Query: 21 KLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 KLDIAFRH GITS DKW SWAINPN+DLTS+M G QALVAI QS+G+ + YTSSI ++GT LAE NISY + L++T+ N E I Sbjct: 90 KLDIAFRHTGITSIDKWVSWAINPNNDLTSAMPGAQALVAIPQSNGAPKTYTSSISDYGTTLAEGNISYPITGLTSTYQNNELTI 174
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4PDX5|A0A6A4PDX5_LUPAL (Cytochrome b561 and DOMON domain-containing protein OS=Lupinus albus OX=3870 GN=Lalb_Chr15g0088041 PE=4 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.267e-27 Identity = 56/85 (65.88%), Postives = 67/85 (78.82%), Query Frame = 0 Query: 21 KLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 KLDIAFRH GITS DKW SWAINPN+DLTS+M G QALVAI QS+G+ + YTSSI ++GT LAE NISY + L++T+ N E I Sbjct: 59 KLDIAFRHTGITSIDKWVSWAINPNNDLTSAMPGAQALVAIPQSNGAPKTYTSSISDYGTTLAEGNISYPITGLTSTYQNNELTI 143
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8VYH6|B651B_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g17280 OS=Arabidopsis thaliana OX=3702 GN=At4g17280 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.302e-16 Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 L IA+RH +TS KW +WA+NP ++ M G QA+VA QS G++R YTS I ++ T L E ++S++ S LSAT+ N E +L Sbjct: 69 LHIAYRHTKLTSG-KWVAWAVNPT---STGMVGAQAIVAYPQSDGTVRVYTSPIRSYQTSLLEGDLSFNVSGLSATYQNNEIVVL 149
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FGK4|B561J_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g47530 OS=Arabidopsis thaliana OX=3702 GN=At5g47530 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.540e-16 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 L IA+RH +T KW +WA+NP ++ M G QA+VA QS G++RAYTS I ++ T L E+ +S++ S+LSAT+ N E I Sbjct: 62 LQIAYRHTKLTPG-KWVAWAVNPT---STGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQLSATYQNNEMVI 141
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FKH6|B561P_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana OX=3702 GN=At5g35735 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.573e-13 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 19 NRKLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSS-GSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 N + IA+RH G TS W +W +NP+ ++ M G QALVA T ++ +AYTSS+ ++GT+L S++S+ S LSAT +GE I Sbjct: 61 NGTVSIAYRHPG-TSASSWVAWGLNPS---STQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFGVSGLSATLVSGEVTIF 145
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LYS9|B561H_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g59070 OS=Arabidopsis thaliana OX=3702 GN=At3g59070 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.644e-12 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQS-SGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 L+IA+ H+ + S+ W SWAINP + M G QALVA S SG +RAYTSSI ++ L ES +S +++SA ++NGE I Sbjct: 72 LEIAYHHSNLESSS-WISWAINPT---SKGMVGAQALVAYRNSTSGVMRAYTSSINSYSPMLQESPLSLRVTQVSAEYSNGEMMIF 153
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FKC1|B561Q_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g48750 OS=Arabidopsis thaliana OX=3702 GN=At5g48750 PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.888e-10 Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQS-SGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 L++A+RH I S+ W +W INP + M G Q L+A S SG +RAYTSSI + L E +S+ ++LSA + N E I Sbjct: 69 LEVAYRHTNIESSS-WIAWGINPT---SKGMIGAQTLLAYRNSTSGFMRAYTSSINGYTPMLQEGPLSFRVTQLSAEYLNREMTIF 150
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. Araport11
Match: AT4G17280.1 (| Auxin-responsive family protein | Chr4:9678887-9680277 REVERSE LENGTH=402 | 201606) HSP 1 Score: 74.3294 bits (181), Expect = 8.493e-17 Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 L IA+RH +TS KW +WA+NP ++ M G QA+VA QS G++R YTS I ++ T L E ++S++ S LSAT+ N E +L Sbjct: 69 LHIAYRHTKLTSG-KWVAWAVNPT---STGMVGAQAIVAYPQSDGTVRVYTSPIRSYQTSLLEGDLSFNVSGLSATYQNNEIVVL 149
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. Araport11
Match: AT5G47530.1 (| Auxin-responsive family protein | Chr5:19281471-19282870 FORWARD LENGTH=395 | 201606) HSP 1 Score: 74.3294 bits (181), Expect = 9.760e-17 Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSSGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAI 105 L IA+RH +T KW +WA+NP ++ M G QA+VA QS G++RAYTS I ++ T L E+ +S++ S+LSAT+ N E I Sbjct: 62 LQIAYRHTKLTPG-KWVAWAVNPT---STGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQLSATYQNNEMVI 141
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. Araport11
Match: AT5G35735.1 (| Auxin-responsive family protein | Chr5:13900913-13902934 REVERSE LENGTH=404 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 7.748e-14 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 19 NRKLDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQSS-GSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 N + IA+RH G TS W +W +NP+ ++ M G QALVA T ++ +AYTSS+ ++GT+L S++S+ S LSAT +GE I Sbjct: 61 NGTVSIAYRHPG-TSASSWVAWGLNPS---STQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFGVSGLSATLVSGEVTIF 145
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. Araport11
Match: AT3G59070.1 (| Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein | Chr3:21832364-21834514 REVERSE LENGTH=466 | 201606) HSP 1 Score: 64.6994 bits (156), Expect = 2.705e-13 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQS-SGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 L+IA+ H+ + S+ W SWAINP + M G QALVA S SG +RAYTSSI ++ L ES +S +++SA ++NGE I Sbjct: 72 LEIAYHHSNLESSS-WISWAINPT---SKGMVGAQALVAYRNSTSGVMRAYTSSINSYSPMLQESPLSLRVTQVSAEYSNGEMMIF 153
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. Araport11
Match: AT5G48750.1 (| Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein | Chr5:19770052-19770819 REVERSE LENGTH=255 | 201606) HSP 1 Score: 58.151 bits (139), Expect = 2.955e-11 Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0 Query: 22 LDIAFRHAGITSNDKWFSWAINPNDDLTSSMNGGQALVAITQS-SGSLRAYTSSIMNFGTKLAESNISYSHSKLSATHANGEAAIL 106 L++A+RH I S+ W +W INP + M G Q L+A S SG +RAYTSSI + L E +S+ ++LSA + N E I Sbjct: 69 LEVAYRHTNIESSS-WIAWGINPT---SKGMIGAQTLLAYRNSTSGFMRAYTSSINGYTPMLQEGPLSFRVTQLSAEYLNREMTIF 150 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 5
BLAST of Vfaba.Hedin2.R1.5g154640.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 5
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g154640.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g154640.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g154640.1; organism=Vicia faba; type=mRNA; length=321bpback to top protein sequence of Vfaba.Hedin2.R1.5g154640.1_vfh_v1 >Vfaba.Hedin2.R1.5g154640.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g154640.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g154640.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=106bpback to top mRNA from alignment at chr5:1090011515..1090011835+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g154640.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g154640.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g154640.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1090011515..1090011835+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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