Vfaba.Hedin2.R1.5g155920.1

Transcript Overview
NameVfaba.Hedin2.R1.5g155920.1
Unique NameVfaba.Hedin2.R1.5g155920.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length561
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:1096859346..1096859906 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR464Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL150Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL439Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL535Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL223Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL351Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL527Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0212Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0503Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL089Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL058Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL278Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL178Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL523Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL675Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL238Pisum sativum Cameor genome v1aPisum sativum
psvfhL257Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL187Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL262Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL361Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR538Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR562Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR587Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR595Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL095Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL261Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0583Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0909Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0916Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1255Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR565Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR567Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR609Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR486Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR510Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR562Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR536Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR540Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR616Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR639Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL061Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL192Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL304Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL475Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL096Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL423Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL530Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL048Cicer arietinum
carvfhL191Cicer arietinum
carvfhL289Cicer arietinum
carvfhL469Cicer arietinum
ccavfhL102Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL265Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL361Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL424Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR647Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR679Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR712Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR717Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR591Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR618Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL461Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL597Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL770Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR637Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR666Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR693Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL060Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL179Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL494Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL654Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR495Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR520Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR542Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR552Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_003230Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_00286Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_00726.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_07G00652.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Cc_v2.0_07999.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.06G154900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_09629.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_004506192.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun01g182500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cr_01385.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va08G057040.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun01g182500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va03G082140.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va02G004120.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_14467Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigan.08G347700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_028797Cajanus cajan Asha genome v1.0Cajanus cajan
jg44071.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.06G142800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058873675.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-TanjilR_28604Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.011G101000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr05.785Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_23819.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan03g293500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg31594.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr07.1735Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.04G404100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun05g230000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_004494861.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_00880Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Phvul.007G265700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_05471.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun05g230000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan08g129700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.04G231600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_07929.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr05.2196Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan02g017800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_19814Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.005G117300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.001G198100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun07g019500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058884754.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_08G02591.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004487377.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014655856.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun07g019500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_03140.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_10715Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.08G238700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_004497569.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.3g027080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.3g035040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.5g124800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g155920Vfaba.Hedin2.R1.5g155920_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g155920.1_vfh_v1-exonVfaba.Hedin2.R1.5g155920.1_vfh_v1-exon-chr5_vfh_v1:1096859346..1096859906Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g155920.1_vfh_v1-cdsVfaba.Hedin2.R1.5g155920.1_vfh_v1-cds-chr5_vfh_v1:1096859346..1096859906Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g155920.1_vfh_v1Vfaba.Hedin2.R1.5g155920.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.5g155920.1_vfh_v1Vfaba.Hedin2.R1.5g155920.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392NDA5|A0A392NDA5_9FABA (Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 3.915e-67
Identity = 131/187 (70.05%), Postives = 151/187 (80.75%), Query Frame = 0
Query:    1 MSNKIVLRQAASTHRRQPLLNSQSSRTA-IVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQ--PKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMVSGKFQVQLIELKQQTTN 184
            MSNKI+LRQ A  HRRQPLL  Q SRTA  VGEV+G TAAEC+AV CCCP  LA+  LL +YK+P GL RK+LRKRRRRR+IKEGL+Q   K+R C CGCC+DVNGVPRIYPMCINDASDIKRLH    +N++DE+AIALEKEMWERFYSAGFWRSSSRRE     T+ VSG FQ+QLI+L Q ++ 
Sbjct:    1 MSNKIILRQPAKNHRRQPLLQIQPSRTASTVGEVVGGTAAECVAVCCCCPLTLADFLLLTIYKIPVGLYRKMLRKRRRRRVIKEGLLQLQQKQRKCSCGCCEDVNGVPRIYPMCINDASDIKRLHSSESDNDDDEDAIALEKEMWERFYSAGFWRSSSRRET----TQTVSGNFQLQLIQLPQTSST 183          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LEQ3|A0A445LEQ3_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007735 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.302e-66
Identity = 104/164 (63.41%), Postives = 129/164 (78.66%), Query Frame = 0
Query:    1 MSNKIVLRQAA-STHRRQPLLNSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161
            MSN I+LRQA  ST+RRQPL   + S+ A  VGEV+G TAAEC+AV CC PCG+AN  LLA+YK+PAGLCR++L+KRR ++++KEGL +P RR+C CGCCDDV+G  RIYPMC NDA D+KRL   + E +NND+   ALEKEMW++FYS GFWRSSS RE  E
Sbjct:    1 MSNGIILRQAGGSTNRRQPLQQRRPSKAATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLCRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSG-SRIYPMCANDAVDVKRLCSTTTELDNNDDATRALEKEMWDQFYSTGFWRSSSNREVRE 163          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|I1JQB9|I1JQB9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102660779 PE=4 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 1.967e-65
Identity = 103/164 (62.80%), Postives = 128/164 (78.05%), Query Frame = 0
Query:    1 MSNKIVLRQ-AASTHRRQPLLNSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161
            MSN I+LRQ   ST+RRQPL   + S+ A  VGEV+G TAAEC+AV CC PCG+AN  LLA+YK+PAGLCR++L+KRR ++++KEGL +P RR+C CGCCDDV+G  RIYPMC NDA D+KRL   + E +NND+   ALEKEMW++FYS GFWRSSS RE  E
Sbjct:    1 MSNGIILRQPGGSTNRRQPLQQRRPSKAATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLCRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSG-SRIYPMCANDAVDVKRLCSTTTELDNNDDATRALEKEMWDQFYSTGFWRSSSNREVRE 163          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FJ36|A0A445FJ36_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052056 PE=4 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.970e-64
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0
Query:    1 MSNKIVLRQAA-STHRRQPLL-NSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161
            MSN+I+LRQA  ST+RRQPLL   + S+ A  VGEV+G TAAEC+AV CC PCG+AN  LLA+YK+PAGL R++L+KRR ++++KEGL +P RR+C CGCCDDV+G  RIYPMC NDA DIKRL   + E +NND+   ALEKEMW++FY  GFWRSSS RE  E
Sbjct:    1 MSNRIILRQAGGSTNRRQPLLLQRRPSKMATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGS-RIYPMCANDAVDIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNREVRE 164          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|K7MZD4|K7MZD4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100794951 PE=4 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.970e-64
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0
Query:    1 MSNKIVLRQAA-STHRRQPLL-NSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161
            MSN+I+LRQA  ST+RRQPLL   + S+ A  VGEV+G TAAEC+AV CC PCG+AN  LLA+YK+PAGL R++L+KRR ++++KEGL +P RR+C CGCCDDV+G  RIYPMC NDA DIKRL   + E +NND+   ALEKEMW++FY  GFWRSSS RE  E
Sbjct:    1 MSNRIILRQAGGSTNRRQPLLLQRRPSKMATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGS-RIYPMCANDAVDIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNREVRE 164          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MEF2|A0A2K3MEF2_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g045289 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 3.057e-63
Identity = 126/187 (67.38%), Postives = 154/187 (82.35%), Query Frame = 0
Query:    1 MSNKIVLRQAASTHRRQPLLNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQ--PKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRL-HDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMVSGKFQVQLIELKQQTTN 184
            MSNKI+LRQ A  HRRQPLL+S+++ T  VGEV+G TAAEC+AV CCCP  LA+  LL +YK+P GL RK+LRKRRRRR+IKEGL+Q   K+R C CGCC+DVNGVPRIYPMCINDASDIKRL +    +N++DE+AIALEKEMWERFYSAGFWRSSSRRE +++   +VSG FQ+QLI+L Q ++ 
Sbjct:    1 MSNKIILRQPAKNHRRQPLLHSRTAST--VGEVVGGTAAECVAVCCCCPLTLADFLLLTIYKIPVGLYRKMLRKRRRRRVIKEGLLQLEQKQRKCSCGCCEDVNGVPRIYPMCINDASDIKRLQYSSESDNDDDEDAIALEKEMWERFYSAGFWRSSSRRETTQT---VVSGNFQLQLIQLPQTSST 182          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LJB8|A0A2Z6LJB8_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_340840 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.600e-62
Identity = 127/197 (64.47%), Postives = 153/197 (77.66%), Query Frame = 0
Query:    1 MSNKIVLRQAASTHRRQP--------LLNSQSSRT-AIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGL--IQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDG-SFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMVSGKFQVQLIELKQQTTNI 185
            MSNKI+LRQ A   RRQP        LL  Q +RT + VGEV+G TAAEC+AV CCCP  LA+  LL +YK+P GL RK+LRKRRRRR+IKEGL  +QPK R C CGCC+DVNGVPRIYPMCINDASDIKRLH   S  +++D++A+ALEKEMWERFYS GFWRSSSRRE+    T++VSG FQ+QLI+L Q +T++
Sbjct:    1 MSNKIILRQPAKNLRRQPAKNLRRQPLLKIQPARTVSTVGEVVGGTAAECVAVCCCCPLTLADFLLLTIYKIPMGLYRKMLRKRRRRRVIKEGLLQLQPKERKCSCGCCEDVNGVPRIYPMCINDASDIKRLHSSESDNDDDDKDAMALEKEMWERFYSTGFWRSSSRRES----TQIVSGNFQLQLIQLPQTSTHV 193          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7GX67|A0A1J7GX67_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_19814 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.763e-62
Identity = 100/163 (61.35%), Postives = 127/163 (77.91%), Query Frame = 0
Query:    1 MSNKIVLRQAAST--HRRQPLLNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQP-KRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENS 160
            MSNKI+LR AAS+  HR QPLL +Q+S+ +  GEV+G TAAEC+AV CC PCGLAN  +LA+YK+PAGLCR++L+ RRR+R++KEG   P  RR+C CGCC + NG+ RI+PMC ND SDIK +H       +D++AIALEKEMW++FY  GFWRSSSRRE S
Sbjct:    1 MSNKIILRPAASSSHHRLQPLLQTQTSKHSF-GEVVGGTAAECVAVCCCFPCGLANFIILAIYKVPAGLCRRMLKTRRRKRLLKEGRFPPMNRRHCSCGCC-EFNGL-RIHPMCANDESDIKSIHS---VEPDDKDAIALEKEMWDKFYGTGFWRSSSRRETS 157          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XWA3|A0A1S2XWA3_CICAR (uncharacterized protein LOC101488959 OS=Cicer arietinum OX=3827 GN=LOC101488959 PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.211e-61
Identity = 118/168 (70.24%), Postives = 139/168 (82.74%), Query Frame = 0
Query:    1 MSNKIVLRQAASTHRRQPLLNSQSSRT-AIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMV 167
            MSNKIVLRQAAS HRRQPLL  QSS+T +  GEV+G+T AEC+AV CC PCGLAN  +LA+YK+P GLCR+ILRKR+RRRIIKEGL+ PKRRNC CGCC+DVNG PRI+PMC ND SDIKR++  S     D++AIALEKEMWERF SAGFWRSSSRRE+    T+++
Sbjct:    1 MSNKIVLRQAASAHRRQPLLQVQSSKTGSSFGEVVGATTAECVAVCCCFPCGLANFLVLAIYKVPTGLCRRILRKRQRRRIIKEGLLPPKRRNCSCGCCEDVNG-PRIHPMCANDDSDIKRVY-SSESVVKDKDAIALEKEMWERFDSAGFWRSSSRRESQSQSTQIL 166          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|V7CXZ8|V7CXZ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G198100g PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.770e-60
Identity = 104/178 (58.43%), Postives = 139/178 (78.09%), Query Frame = 0
Query:    1 MSNKIVLRQAASTHRRQPLLNSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSS---RRENSESRTEMVSGKFQVQ 174
            MSN+++LR   +++RRQPLL  + S+ A  VGEV+G TAAEC+AV CC PCG+AN  +LA+YK+PA LCR++LR+RR R+I KEGL++P RR+C CGCC+DVNG  RI+PMC NDA DIKRLH  S E ++D+  +ALEKEMW++FYS GFWRSSS   RRE+S+++T+ +S     Q
Sbjct:    1 MSNRMMLR---ASNRRQPLLQRRPSKLATRVGEVVGGTAAECVAVCCCIPCGVANFLVLAIYKVPAALCRRMLRQRRHRKIAKEGLLKPTRRHCSCGCCEDVNGS-RIFPMCANDAFDIKRLH--SPEPDSDDETLALEKEMWDQFYSTGFWRSSSNRERRESSQTQTQTLSSNVVPQ 172          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Match: AT3G11690.1 (| hypothetical protein | Chr3:3695484-3696242 FORWARD LENGTH=252 | 201606)

HSP 1 Score: 87.4261 bits (215), Expect = 4.296e-21
Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 0
Query:   17 QPLL----NSQSSRTAIVG----EVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDV--NGVPRIYPMCINDAS---------DIKRLHDG--------SFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSES 162
            QPLL    +S S R +  G    E  G T A C AV CCCPCGL N+ +LA+YK+P G+CR+ +R RRR++++K G++ P   +        V  N    I+P+  +D S         D+K +              + +DE  +ALEKEMW RFY AGFWRS S+RE+  S
Sbjct:   33 QPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQRESVSS 205          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Match: AT5G06380.1 (| hypothetical protein | Chr5:1949632-1950072 FORWARD LENGTH=146 | 201606)

HSP 1 Score: 69.707 bits (169), Expect = 3.454e-15
Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 0
Query:    1 MSNKIVLRQAASTHRRQPLLNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSES 162
            M+ +  LR++ ST    P L    S TA   E  G T A C A+  C PC + N+ +LAVYKLP GLCR+ +R+ RR+R+ K+  ++  R     G          ++P+        +   +   E   DE  IALEKEMW RFYS GFWRS S+ E + S
Sbjct:    1 MNKQPSLRRSLST----PSLCGGGSTTA---ECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGREFGRGGSSQFA-----VHPL--------ESRDEEEEEEEEDEAVIALEKEMWSRFYSGGFWRSLSQAETASS 142          
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Match: AT2G27180.1 (| hypothetical protein | Chr2:11620473-11620970 FORWARD LENGTH=165 | 201606)

HSP 1 Score: 66.2402 bits (160), Expect = 8.176e-14
Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 0
Query:    1 MSNKIVLRQAASTHRRQPL-LNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKIL--RKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENS 160
            + + +++    ST R  P    S S     VGEV G  AAEC AV CCCPC + N+ +LAVYK+PA +C+K     KRRR    + GL+         G    V+   R+    +      +  H    E N   + + LE EM +RFY AGFWRS S+++ S
Sbjct:    7 LKSPLLVSSEESTMRNSPPSTTSLSKERRKVGEVAGGAAAECAAVWCCCPCAVVNLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATAE---GSESTVHA--RLNEEDLTAEIVFEECHVSGGELN---DVVRLENEMLDRFYGAGFWRSPSQKDTS 161          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A392NDA5|A0A392NDA5_9FABA3.915e-6770.05Uncharacterized protein OS=Trifolium medium OX=970... [more]
tr|A0A445LEQ3|A0A445LEQ3_GLYSO4.302e-6663.41Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1JQB9|I1JQB9_SOYBN1.967e-6562.80Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445FJ36|A0A445FJ36_GLYSO2.970e-6463.03Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|K7MZD4|K7MZD4_SOYBN2.970e-6463.03Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A2K3MEF2|A0A2K3MEF2_TRIPR3.057e-6367.38Uncharacterized protein OS=Trifolium pratense OX=5... [more]
tr|A0A2Z6LJB8|A0A2Z6LJB8_TRISU1.600e-6264.47Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|A0A1J7GX67|A0A1J7GX67_LUPAN2.763e-6261.35Uncharacterized protein OS=Lupinus angustifolius O... [more]
tr|A0A1S2XWA3|A0A1S2XWA3_CICAR3.211e-6170.24uncharacterized protein LOC101488959 OS=Cicer arie... [more]
tr|V7CXZ8|V7CXZ8_PHAVU9.770e-6058.43Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
back to top
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G11690.14.296e-2139.31| hypothetical protein | Chr3:3695484-3696242 FORW... [more]
AT5G06380.13.454e-1538.27| hypothetical protein | Chr5:1949632-1950072 FORW... [more]
AT2G27180.18.176e-1436.20| hypothetical protein | Chr2:11620473-11620970 FO... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33264EXPRESSED PROTEINcoord: 12..163

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.5g155920.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g155920.1; organism=Vicia faba; type=mRNA; length=561bp
ATGTCGAACAAGATAGTTCTCCGGCAGGCAGCGTCGACGCACCGGCGACA
ACCGTTACTCAATAGCCAATCATCGAGAACAGCCATTGTCGGCGAAGTAA
TCGGAAGCACCGCGGCGGAGTGCTTGGCGGTGGCCTGTTGCTGTCCATGC
GGGTTAGCGAATATTTTTCTGTTAGCAGTTTACAAACTCCCGGCGGGTCT
TTGCCGGAAAATACTCAGAAAACGACGGCGGCGGAGGATTATAAAAGAAG
GCTTGATACAACCGAAGCGTCGTAACTGTTGTTGCGGTTGTTGCGACGAT
GTTAACGGTGTACCTCGTATTTACCCTATGTGTATAAACGACGCTTCGGA
TATAAAACGACTGCATGATGGGTCGTTTGAGAATAATAACGATGAAAATG
CTATAGCTCTTGAGAAAGAGATGTGGGAGAGATTCTACAGTGCTGGATTT
TGGAGAAGTTCTTCAAGGAGAGAAAATTCAGAATCAAGAACAGAAATGGT
TTCTGGAAAATTTCAAGTTCAATTGATTGAATTGAAACAACAAACAACAA
ACATTGGATGA
back to top

protein sequence of Vfaba.Hedin2.R1.5g155920.1_vfh_v1

>Vfaba.Hedin2.R1.5g155920.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=186bp
MSNKIVLRQAASTHRRQPLLNSQSSRTAIVGEVIGSTAAECLAVACCCPC
GLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDD
VNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGF
WRSSSRRENSESRTEMVSGKFQVQLIELKQQTTNIG
back to top

mRNA from alignment at chr5:1096859346..1096859906-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.5g155920.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g155920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1096859346..1096859906- (Vicia faba
back to top