Vfaba.Hedin2.R1.5g155920.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392NDA5|A0A392NDA5_9FABA (Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.915e-67 Identity = 131/187 (70.05%), Postives = 151/187 (80.75%), Query Frame = 0 Query: 1 MSNKIVLRQAASTHRRQPLLNSQSSRTA-IVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQ--PKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMVSGKFQVQLIELKQQTTN 184 MSNKI+LRQ A HRRQPLL Q SRTA VGEV+G TAAEC+AV CCCP LA+ LL +YK+P GL RK+LRKRRRRR+IKEGL+Q K+R C CGCC+DVNGVPRIYPMCINDASDIKRLH +N++DE+AIALEKEMWERFYSAGFWRSSSRRE T+ VSG FQ+QLI+L Q ++ Sbjct: 1 MSNKIILRQPAKNHRRQPLLQIQPSRTASTVGEVVGGTAAECVAVCCCCPLTLADFLLLTIYKIPVGLYRKMLRKRRRRRVIKEGLLQLQQKQRKCSCGCCEDVNGVPRIYPMCINDASDIKRLHSSESDNDDDEDAIALEKEMWERFYSAGFWRSSSRRET----TQTVSGNFQLQLIQLPQTSST 183
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LEQ3|A0A445LEQ3_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007735 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 4.302e-66 Identity = 104/164 (63.41%), Postives = 129/164 (78.66%), Query Frame = 0 Query: 1 MSNKIVLRQAA-STHRRQPLLNSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161 MSN I+LRQA ST+RRQPL + S+ A VGEV+G TAAEC+AV CC PCG+AN LLA+YK+PAGLCR++L+KRR ++++KEGL +P RR+C CGCCDDV+G RIYPMC NDA D+KRL + E +NND+ ALEKEMW++FYS GFWRSSS RE E Sbjct: 1 MSNGIILRQAGGSTNRRQPLQQRRPSKAATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLCRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSG-SRIYPMCANDAVDVKRLCSTTTELDNNDDATRALEKEMWDQFYSTGFWRSSSNREVRE 163
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|I1JQB9|I1JQB9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102660779 PE=4 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 1.967e-65 Identity = 103/164 (62.80%), Postives = 128/164 (78.05%), Query Frame = 0 Query: 1 MSNKIVLRQ-AASTHRRQPLLNSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161 MSN I+LRQ ST+RRQPL + S+ A VGEV+G TAAEC+AV CC PCG+AN LLA+YK+PAGLCR++L+KRR ++++KEGL +P RR+C CGCCDDV+G RIYPMC NDA D+KRL + E +NND+ ALEKEMW++FYS GFWRSSS RE E Sbjct: 1 MSNGIILRQPGGSTNRRQPLQQRRPSKAATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLCRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSG-SRIYPMCANDAVDVKRLCSTTTELDNNDDATRALEKEMWDQFYSTGFWRSSSNREVRE 163
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FJ36|A0A445FJ36_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052056 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.970e-64 Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0 Query: 1 MSNKIVLRQAA-STHRRQPLL-NSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161 MSN+I+LRQA ST+RRQPLL + S+ A VGEV+G TAAEC+AV CC PCG+AN LLA+YK+PAGL R++L+KRR ++++KEGL +P RR+C CGCCDDV+G RIYPMC NDA DIKRL + E +NND+ ALEKEMW++FY GFWRSSS RE E Sbjct: 1 MSNRIILRQAGGSTNRRQPLLLQRRPSKMATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGS-RIYPMCANDAVDIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNREVRE 164
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|K7MZD4|K7MZD4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100794951 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.970e-64 Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0 Query: 1 MSNKIVLRQAA-STHRRQPLL-NSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFE-NNNDENAIALEKEMWERFYSAGFWRSSSRRENSE 161 MSN+I+LRQA ST+RRQPLL + S+ A VGEV+G TAAEC+AV CC PCG+AN LLA+YK+PAGL R++L+KRR ++++KEGL +P RR+C CGCCDDV+G RIYPMC NDA DIKRL + E +NND+ ALEKEMW++FY GFWRSSS RE E Sbjct: 1 MSNRIILRQAGGSTNRRQPLLLQRRPSKMATRVGEVVGGTAAECVAVCCCFPCGVANFLLLAIYKVPAGLYRRVLKKRRHQKMLKEGLRKPTRRHCSCGCCDDVSGS-RIYPMCANDAVDIKRLRSTTTELDNNDDATRALEKEMWDQFYGTGFWRSSSNREVRE 164
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MEF2|A0A2K3MEF2_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g045289 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.057e-63 Identity = 126/187 (67.38%), Postives = 154/187 (82.35%), Query Frame = 0 Query: 1 MSNKIVLRQAASTHRRQPLLNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQ--PKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRL-HDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMVSGKFQVQLIELKQQTTN 184 MSNKI+LRQ A HRRQPLL+S+++ T VGEV+G TAAEC+AV CCCP LA+ LL +YK+P GL RK+LRKRRRRR+IKEGL+Q K+R C CGCC+DVNGVPRIYPMCINDASDIKRL + +N++DE+AIALEKEMWERFYSAGFWRSSSRRE +++ +VSG FQ+QLI+L Q ++ Sbjct: 1 MSNKIILRQPAKNHRRQPLLHSRTAST--VGEVVGGTAAECVAVCCCCPLTLADFLLLTIYKIPVGLYRKMLRKRRRRRVIKEGLLQLEQKQRKCSCGCCEDVNGVPRIYPMCINDASDIKRLQYSSESDNDDDEDAIALEKEMWERFYSAGFWRSSSRRETTQT---VVSGNFQLQLIQLPQTSST 182
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LJB8|A0A2Z6LJB8_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_340840 PE=4 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.600e-62 Identity = 127/197 (64.47%), Postives = 153/197 (77.66%), Query Frame = 0 Query: 1 MSNKIVLRQAASTHRRQP--------LLNSQSSRT-AIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGL--IQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDG-SFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMVSGKFQVQLIELKQQTTNI 185 MSNKI+LRQ A RRQP LL Q +RT + VGEV+G TAAEC+AV CCCP LA+ LL +YK+P GL RK+LRKRRRRR+IKEGL +QPK R C CGCC+DVNGVPRIYPMCINDASDIKRLH S +++D++A+ALEKEMWERFYS GFWRSSSRRE+ T++VSG FQ+QLI+L Q +T++ Sbjct: 1 MSNKIILRQPAKNLRRQPAKNLRRQPLLKIQPARTVSTVGEVVGGTAAECVAVCCCCPLTLADFLLLTIYKIPMGLYRKMLRKRRRRRVIKEGLLQLQPKERKCSCGCCEDVNGVPRIYPMCINDASDIKRLHSSESDNDDDDKDAMALEKEMWERFYSTGFWRSSSRRES----TQIVSGNFQLQLIQLPQTSTHV 193
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7GX67|A0A1J7GX67_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_19814 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.763e-62 Identity = 100/163 (61.35%), Postives = 127/163 (77.91%), Query Frame = 0 Query: 1 MSNKIVLRQAAST--HRRQPLLNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQP-KRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENS 160 MSNKI+LR AAS+ HR QPLL +Q+S+ + GEV+G TAAEC+AV CC PCGLAN +LA+YK+PAGLCR++L+ RRR+R++KEG P RR+C CGCC + NG+ RI+PMC ND SDIK +H +D++AIALEKEMW++FY GFWRSSSRRE S Sbjct: 1 MSNKIILRPAASSSHHRLQPLLQTQTSKHSF-GEVVGGTAAECVAVCCCFPCGLANFIILAIYKVPAGLCRRMLKTRRRKRLLKEGRFPPMNRRHCSCGCC-EFNGL-RIHPMCANDESDIKSIHS---VEPDDKDAIALEKEMWDKFYGTGFWRSSSRRETS 157
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XWA3|A0A1S2XWA3_CICAR (uncharacterized protein LOC101488959 OS=Cicer arietinum OX=3827 GN=LOC101488959 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.211e-61 Identity = 118/168 (70.24%), Postives = 139/168 (82.74%), Query Frame = 0 Query: 1 MSNKIVLRQAASTHRRQPLLNSQSSRT-AIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSESRTEMV 167 MSNKIVLRQAAS HRRQPLL QSS+T + GEV+G+T AEC+AV CC PCGLAN +LA+YK+P GLCR+ILRKR+RRRIIKEGL+ PKRRNC CGCC+DVNG PRI+PMC ND SDIKR++ S D++AIALEKEMWERF SAGFWRSSSRRE+ T+++ Sbjct: 1 MSNKIVLRQAASAHRRQPLLQVQSSKTGSSFGEVVGATTAECVAVCCCFPCGLANFLVLAIYKVPTGLCRRILRKRQRRRIIKEGLLPPKRRNCSCGCCEDVNG-PRIHPMCANDDSDIKRVY-SSESVVKDKDAIALEKEMWERFDSAGFWRSSSRRESQSQSTQIL 166
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Match: tr|V7CXZ8|V7CXZ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G198100g PE=4 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.770e-60 Identity = 104/178 (58.43%), Postives = 139/178 (78.09%), Query Frame = 0 Query: 1 MSNKIVLRQAASTHRRQPLLNSQSSRTAI-VGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSS---RRENSESRTEMVSGKFQVQ 174 MSN+++LR +++RRQPLL + S+ A VGEV+G TAAEC+AV CC PCG+AN +LA+YK+PA LCR++LR+RR R+I KEGL++P RR+C CGCC+DVNG RI+PMC NDA DIKRLH S E ++D+ +ALEKEMW++FYS GFWRSSS RRE+S+++T+ +S Q Sbjct: 1 MSNRMMLR---ASNRRQPLLQRRPSKLATRVGEVVGGTAAECVAVCCCIPCGVANFLVLAIYKVPAALCRRMLRQRRHRKIAKEGLLKPTRRHCSCGCCEDVNGS-RIFPMCANDAFDIKRLH--SPEPDSDDETLALEKEMWDQFYSTGFWRSSSNRERRESSQTQTQTLSSNVVPQ 172
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Match: AT3G11690.1 (| hypothetical protein | Chr3:3695484-3696242 FORWARD LENGTH=252 | 201606) HSP 1 Score: 87.4261 bits (215), Expect = 4.296e-21 Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 0 Query: 17 QPLL----NSQSSRTAIVG----EVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDV--NGVPRIYPMCINDAS---------DIKRLHDG--------SFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSES 162 QPLL +S S R + G E G T A C AV CCCPCGL N+ +LA+YK+P G+CR+ +R RRR++++K G++ P + V N I+P+ +D S D+K + + +DE +ALEKEMW RFY AGFWRS S+RE+ S Sbjct: 33 QPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQRESVSS 205
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Match: AT5G06380.1 (| hypothetical protein | Chr5:1949632-1950072 FORWARD LENGTH=146 | 201606) HSP 1 Score: 69.707 bits (169), Expect = 3.454e-15 Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 0 Query: 1 MSNKIVLRQAASTHRRQPLLNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKILRKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENSES 162 M+ + LR++ ST P L S TA E G T A C A+ C PC + N+ +LAVYKLP GLCR+ +R+ RR+R+ K+ ++ R G ++P+ + + E DE IALEKEMW RFYS GFWRS S+ E + S Sbjct: 1 MNKQPSLRRSLST----PSLCGGGSTTA---ECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGREFGRGGSSQFA-----VHPL--------ESRDEEEEEEEEDEAVIALEKEMWSRFYSGGFWRSLSQAETASS 142
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Match: AT2G27180.1 (| hypothetical protein | Chr2:11620473-11620970 FORWARD LENGTH=165 | 201606) HSP 1 Score: 66.2402 bits (160), Expect = 8.176e-14 Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 0 Query: 1 MSNKIVLRQAASTHRRQPL-LNSQSSRTAIVGEVIGSTAAECLAVACCCPCGLANIFLLAVYKLPAGLCRKIL--RKRRRRRIIKEGLIQPKRRNCCCGCCDDVNGVPRIYPMCINDASDIKRLHDGSFENNNDENAIALEKEMWERFYSAGFWRSSSRRENS 160 + + +++ ST R P S S VGEV G AAEC AV CCCPC + N+ +LAVYK+PA +C+K KRRR + GL+ G V+ R+ + + H E N + + LE EM +RFY AGFWRS S+++ S Sbjct: 7 LKSPLLVSSEESTMRNSPPSTTSLSKERRKVGEVAGGAAAECAAVWCCCPCAVVNLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATAE---GSESTVHA--RLNEEDLTAEIVFEECHVSGGELN---DVVRLENEMLDRFYGAGFWRSPSQKDTS 161 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.5g155920.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g155920.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g155920.1; organism=Vicia faba; type=mRNA; length=561bpback to top protein sequence of Vfaba.Hedin2.R1.5g155920.1_vfh_v1 >Vfaba.Hedin2.R1.5g155920.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=186bpback to top mRNA from alignment at chr5:1096859346..1096859906- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g155920.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g155920.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g155920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1096859346..1096859906- (Vicia fababack to top |