Vfaba.Hedin2.R1.5g183480.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|G7L0S2|G7L0S2_MEDTR (Putative NTF2-like domain-containing protein OS=Medicago truncatula OX=3880 GN=11433325 PE=4 SV=2) HSP 1 Score: 350.903 bits (899), Expect = 1.034e-120 Identity = 170/219 (77.63%), Postives = 192/219 (87.67%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
MAA RIA RIIN HH+ N N+ YRSISTT+HLQ+SW++K+KNVFT QK+E DASQF TLL+FADEMKKARK+GAFKEY+VGRSS+VTF+TA EKYE IIRYLAAFDYTGENL T+ K EAAKHCNCTIA+VENALAKFTWAKEA KKIQ+LN+EGKPMPK++AELQK+VGTNP+D+AKSNLAKSGQVSRNA CPCGSKKRYKRCCGKD
Sbjct: 1 MAALRIANRIINYHHNLLYN---NYQYRSISTTVHLQSSWMDKVKNVFTGQKSEGAPPDASQF-----TLLNFADEMKKARKVGAFKEYIVGRSSEVTFSTAIEKYEVIIRYLAAFDYTGENLTTNQKHEAAKHCNCTIAEVENALAKFTWAKEAHKKIQKLNQEGKPMPKNMAELQKMVGTNPMDIAKSNLAKSGQVSRNALCPCGSKKRYKRCCGKD 211
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XUJ1|A0A1S2XUJ1_CICAR (uncharacterized protein LOC101492178 OS=Cicer arietinum OX=3827 GN=LOC101492178 PE=4 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 7.752e-117 Identity = 170/221 (76.92%), Postives = 187/221 (84.62%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTE--QPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
MA RIA R+ H LNK ++ YRSI TT+ LQ+SW++KIKNVFT Q TE Q Q QF S SFTLL+FADEM KARKIGAFKEYMVGRSS+VTFATAF+KYEAIIR+L A D TGENLKTS KQEAAKHCNCTIADVENALAKFTWAKEA KKI +LN+EGKPMPKS+AELQKLVGTNP+DLA+SNLA+SGQVSRNA CPCGSKKRYKRCCGKD
Sbjct: 1 MATLRIA-----RNCHRWLNKNQDYQYRSIFTTVQLQSSWMDKIKNVFTGQNTESGQQQPGIYQFTSDSFTLLNFADEMNKARKIGAFKEYMVGRSSEVTFATAFQKYEAIIRFLGALDPTGENLKTSQKQEAAKHCNCTIADVENALAKFTWAKEAHKKILKLNQEGKPMPKSVAELQKLVGTNPLDLARSNLAQSGQVSRNAFCPCGSKKRYKRCCGKD 216
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|V7BQ09|V7BQ09_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G097900g PE=4 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.330e-109 Identity = 151/219 (68.95%), Postives = 179/219 (81.74%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
M RIA++I++ + H H +R+I T LQ SW+ K+KNV T QKT Q Q DAS+ S SFTL+ FADEMKKAR+IGAFKE+MVGRSS+ TF++AFEKYEAIIRYL D TGENL+T+ KQEAAKHC CT+ADVENALAKFTWAKEAQKKI++L +EGKP PKS AE+QKLVG+ P+DLA+SNLAK+GQ+SRNAPCPCGSKKRYKRCCGKD
Sbjct: 1 MPLLRIASKILHSAANQSCK--HQHQHRTIFATTQLQGSWMEKVKNVITGQKTTQSQGDASEVNSDSFTLIRFADEMKKARRIGAFKEFMVGRSSEATFSSAFEKYEAIIRYLGVLDSTGENLQTAQKQEAAKHCGCTLADVENALAKFTWAKEAQKKIEKLKEEGKPTPKSFAEVQKLVGSTPLDLARSNLAKAGQISRNAPCPCGSKKRYKRCCGKD 217
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VHN1|A0A1S3VHN1_VIGRR (uncharacterized protein LOC106775273 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775273 PE=4 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 2.929e-106 Identity = 149/219 (68.04%), Postives = 177/219 (80.82%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
M RIA++I+ H N+ +R+I T LQ SW+ K+KNV T QKT Q Q D +Q SGSFTLL FADEMK A+++GAFKE+MVGRSS+ TF++AFEKYEAIIRYL D TGENL+T KQ+AAKHC+CTIADVENALAKFTWAKEAQKKI++L +EGKP+PKS AELQKLVG+ P+DLA+SNLA+SGQ+SRNA CPCGSKKRYKRCCGKD
Sbjct: 1 MPLLRIASKIL----HSAGNQSCKCQHRTIFATAQLQGSWMEKVKNVITGQKTTQSQGDGAQADSGSFTLLRFADEMKNAKRVGAFKEFMVGRSSEATFSSAFEKYEAIIRYLGVLDPTGENLQTVQKQQAAKHCSCTIADVENALAKFTWAKEAQKKIEKLKEEGKPLPKSFAELQKLVGSTPLDLARSNLAQSGQISRNALCPCGSKKRYKRCCGKD 215
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LGM7|A0A445LGM7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_008120 PE=4 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 5.221e-105 Identity = 150/220 (68.18%), Postives = 179/220 (81.36%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQK-TEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
M + RI +I + +N+ + YR+IS+T LQ SW+ K+KNV T QK T Q Q DASQ S SFTLL FADEMK A++IGAFKE+MVGRSS+ TF++AF+KYEAIIR+L A D TGENL T+ KQEAAKHCNCTIADVE+ALAKFTWAKEAQKKIQ+L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++G +SRNA CPCGSKKRYKRCCGKD
Sbjct: 1 MPSLRILNKIC-----YSINQYCKYKYRTISSTAQLQGSWMEKVKNVITGQKSTPQSQGDASQVTSDSFTLLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLPTAQKQEAAKHCNCTIADVEDALAKFTWAKEAQKKIQKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGLISRNALCPCGSKKRYKRCCGKD 215
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|K7KGU0|K7KGU0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100792311 PE=4 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 1.587e-102 Identity = 148/220 (67.27%), Postives = 176/220 (80.00%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQK-TEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
M + RI +I + +N+ + YR+IS+T LQ SW+ K+KNV T QK T Q Q DASQ S SFTLL FADEMK A++IGAFKE+M GRSS+ TF++AF+KYEAIIR L A D TGENL T+ KQEAAKHCNCTIADVE+ALAKFTWAKEAQKKIQ+L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++G +SRNA CPCGSKKRYKRCCG D
Sbjct: 1 MPSLRILNKIC-----YSINQNCKYKYRTISSTAQLQGSWMEKVKNVITGQKSTPQSQGDASQVTSDSFTLLRFADEMKNAKRIGAFKEFMAGRSSEATFSSAFDKYEAIIRSLGALDPTGENLPTAQKQEAAKHCNCTIADVEDALAKFTWAKEAQKKIQKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGLISRNALCPCGSKKRYKRCCGND 215
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TXK4|A0A151TXK4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_011036 PE=4 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.283e-101 Identity = 150/215 (69.77%), Postives = 176/215 (81.86%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQK-TEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKR 214
M+A RI ++I+ H +N N+ +R+IS+T LQ SW+ K+KNV T QK T Q Q DAS SFTLL FADEMK AR+IGAFK+YMVGRSS+VTF TAFE+YEAIIRYL A D TGENL+T+ KQEAAKHCNCTIADVENALAKFTWAKEAQKKI++L +EGKPMPKS E+QKLVG+ P+DLA+SNLA++GQVSRNA CPCGSKKRYKR
Sbjct: 1 MSALRIVSKIL-----HSVNHKCNYQFRTISSTAPLQGSWMEKVKNVMTGQKSTTQSQGDASD----SFTLLRFADEMKNARRIGAFKDYMVGRSSEVTFTTAFERYEAIIRYLGALDPTGENLQTAQKQEAAKHCNCTIADVENALAKFTWAKEAQKKIEKLQEEGKPMPKSFDEVQKLVGSTPLDLARSNLAQAGQVSRNAFCPCGSKKRYKR 206
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FKX7|A0A445FKX7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052440 PE=4 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.023e-101 Identity = 146/220 (66.36%), Postives = 178/220 (80.91%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQ-KTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
M + RI +I + +N+ YR+IS+T LQ SW+ K+KNV T Q T Q Q DAS+ SF+LL FADEMK A++IGAFKE+MVGRSS+ TF++AF+KYEAIIR+L A D TGENL+T+ KQEAAKHCNCTIADVENALAKFTWAKEAQKK+++L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++GQ+SRNA CPCGSKKRYKRCCGKD
Sbjct: 1 MPSLRILNKIC-----YSINQNCKCQYRTISSTAQLQGSWMEKVKNVITGQNSTPQSQGDASE----SFSLLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLQTTQKQEAAKHCNCTIADVENALAKFTWAKEAQKKLEKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGQISRNALCPCGSKKRYKRCCGKD 211
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|C6TA76|C6TA76_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791282 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 2.023e-101 Identity = 146/220 (66.36%), Postives = 178/220 (80.91%), Query Frame = 0 Query: 1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQ-KTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
M + RI +I + +N+ YR+IS+T LQ SW+ K+KNV T Q T Q Q DAS+ SF+LL FADEMK A++IGAFKE+MVGRSS+ TF++AF+KYEAIIR+L A D TGENL+T+ KQEAAKHCNCTIADVENALAKFTWAKEAQKK+++L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++GQ+SRNA CPCGSKKRYKRCCGKD
Sbjct: 1 MPSLRILNKIC-----YSINQNCKCQYRTISSTAQLQGSWMEKVKNVITGQNSTPQSQGDASE----SFSLLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLQTTQKQEAAKHCNCTIADVENALAKFTWAKEAQKKLEKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGQISRNALCPCGSKKRYKRCCGKD 211
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|M5VZX4|M5VZX4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G337300 PE=4 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.605e-99 Identity = 142/192 (73.96%), Postives = 159/192 (82.81%), Query Frame = 0 Query: 28 RSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
RSI +T HL NSW+NKIK VFT KT + + P SFTLL FADEMK AR+IGAFK+Y+VGRSS+ TFA AFEK EAIIRYL FD TGENL + KQEAAKHCNCTIADVENALAKFTWA+EAQKK++ L KEGKPMPK+I E+QKL+G+ P DLAKSNLAKSGQ+SRNA CPCGSKKRYKRCCGKD
Sbjct: 39 RSIFSTTHLDNSWVNKIKGVFTGNKTSSDETNPGSSPE-SFTLLRFADEMKNARRIGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENLNVTQKQEAAKHCNCTIADVENALAKFTWAREAQKKMENLQKEGKPMPKNINEVQKLMGSTPFDLAKSNLAKSGQISRNALCPCGSKKRYKRCCGKD 229
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. Araport11
Match: AT3G04950.1 (| SEC-C motif protein | Chr3:1371786-1373300 FORWARD LENGTH=231 | 201606) HSP 1 Score: 266.544 bits (680), Expect = 1.062e-90 Identity = 126/198 (63.64%), Postives = 157/198 (79.29%), Query Frame = 0 Query: 22 IHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
I + RSI++T L N W++ IK VFT K + P L+ S P +FTLL FADE+K AR++G FK+Y+VGRSS+ TFA AFEK EA+IRYL A D TGENL+ S KQ+AAKHC CTI DVEN L+KFTWA++A KK+ EL + GKP+PK++ ELQK++G+ P+DLA+SNLAKSGQ+SRNA CPCGSKKRYKRCCGKD
Sbjct: 37 IPSQQQRSITSTAPL-NGWMDSIKGVFTGNK-DTP-LEESNLPVEAFTLLRFADELKNARRLGKFKQYIVGRSSEATFADAFEKQEAVIRYLGALDATGENLQASQKQDAAKHCKCTITDVENTLSKFTWARQAHKKMTELKEGGKPLPKNMGELQKMMGSTPMDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD 231 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.5g183480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183480.1; organism=Vicia faba; type=mRNA; length=660bpback to top protein sequence of Vfaba.Hedin2.R1.5g183480.1_vfh_v1 >Vfaba.Hedin2.R1.5g183480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=219bpback to top mRNA from alignment at chr5:1268782986..1268785630+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.5g183480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1268782986..1268785630+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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