Vfaba.Hedin2.R1.6g015840.1

Transcript Overview
NameVfaba.Hedin2.R1.6g015840.1
Unique NameVfaba.Hedin2.R1.6g015840.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length711
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:127907850..127910693 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR530Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR591Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL170Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL244Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL699Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL708Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ccvfhL0124Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0192Cajanus cajan Asha genome v1.0Cajanus cajan
pvvfhL187Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL453Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL536Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL782Pisum sativum Cameor genome v1aPisum sativum
tifvfhL418Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR643Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR691Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR698Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL106Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL107Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0127Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1088Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1096Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1179Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1191Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR653Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR685Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR583Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR666Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR677Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR627Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
avjvfhL114Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL173Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL705Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL715Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL060Cicer arietinum
carvfhL485Cicer arietinum
carvfhL507Cicer arietinum
ccavfhL109Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL434Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL712Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR800Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR807Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR819Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR827Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR718Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL547Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL604Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL615Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL673Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR788Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR794Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR808Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR818Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL188Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL506Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL557Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR598Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR644Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR649Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
jg5501.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun11g116700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g116700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Phvul.011G103900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr11.1136.1.62122bfbVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
XM_058873649.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat07G0540800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.06G140800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_06G00986.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr11.625Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va08G055970.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g015840Vfaba.Hedin2.R1.6g015840_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-exonVfaba.Hedin2.R1.6g015840.1_vfh_v1-exon-chr6_vfh_v1:127907850..127908009Vicia fabaexon
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-exonVfaba.Hedin2.R1.6g015840.1_vfh_v1-exon-chr6_vfh_v1:127908193..127908254Vicia fabaexon
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-exonVfaba.Hedin2.R1.6g015840.1_vfh_v1-exon-chr6_vfh_v1:127910124..127910213Vicia fabaexon
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-exonVfaba.Hedin2.R1.6g015840.1_vfh_v1-exon-chr6_vfh_v1:127910295..127910693Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-cdsVfaba.Hedin2.R1.6g015840.1_vfh_v1-cds-chr6_vfh_v1:127907850..127908009Vicia fabaCDS
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-cdsVfaba.Hedin2.R1.6g015840.1_vfh_v1-cds-chr6_vfh_v1:127908193..127908254Vicia fabaCDS
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-cdsVfaba.Hedin2.R1.6g015840.1_vfh_v1-cds-chr6_vfh_v1:127910124..127910213Vicia fabaCDS
Vfaba.Hedin2.R1.6g015840.1_vfh_v1-cdsVfaba.Hedin2.R1.6g015840.1_vfh_v1-cds-chr6_vfh_v1:127910295..127910693Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g015840.1_vfh_v1Vfaba.Hedin2.R1.6g015840.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.6g015840.1_vfh_v1Vfaba.Hedin2.R1.6g015840.1_vfh_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6N7R8|A0A2Z6N7R8_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_271010 PE=4 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 7.235e-118
Identity = 191/246 (77.64%), Postives = 205/246 (83.33%), Query Frame = 0 
Query:    1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEENPTKRYTVG----------GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            MS+LLRSTKSKLLSSSSSLSR FSSIPRS NQIG+I+PA+ ELFHR + TLP A+EN TK   +G          GDSNV NSLRYQALGLD NV+AG RYG   C  KSPMLLGVNA+MARNF R V AD LGLAG RRFMSDIPS  SE    S FRPLSPHLPVYQPQLSSTLSICNRIAGAFL+AV LLFY+IYMK+G+V+LTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI
Sbjct:    1 MSWLLRSTKSKLLSSSSSLSRTFSSIPRSTNQIGAISPASAELFHRTTTTLPAADENATKVNVIGVPKNLENKLGGDSNVFNSLRYQALGLDTNVMAGVRYGTNVCATKSPMLLGVNALMARNFVRGVGADALGLAGHRRFMSDIPSKASET---SSFRPLSPHLPVYQPQLSSTLSICNRIAGAFLSAVVLLFYIIYMKIGVVSLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 243
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|G7JDI5|G7JDI5_MEDTR (Putative succinate dehydrogenase (Quinone) OS=Medicago truncatula OX=3880 GN=11443418 PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 2.623e-108
Identity = 181/249 (72.69%), Postives = 196/249 (78.71%), Query Frame = 0 
Query:    1 MSYLLRSTKSKLLSSSSSLSRAFSS-IPRSNNQIGSITPAA--TELFHRNSATLPIAEENPTKRYTVG----------GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            MS+LLRSTKSKL  SSSS   +  S IPRS    GS++PAA   E FHR + TLP A++N TK +  G          G +N  NSLRYQALGLD NVLAGARYG +    KSPMLLG+N +MARN ER V ADTLGLAG RRFMSDIPS TSE K  SGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMK+GLV LT+D FYQFVFYSSKLHLLA+EISALAMSYHLYSAIRHLFI
Sbjct:    1 MSWLLRSTKSKLFLSSSSSLSSTFSSIPRST---GSLSPAAPAAEQFHRTTTTLPYADQNSTKGHFSGLPNNLENKLAGHANQFNSLRYQALGLDTNVLAGARYGTQVSGTKSPMLLGLNTLMARNIERGVGADTLGLAGHRRFMSDIPSKTSEAKQ-SGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKVGLVGLTFDPFYQFVFYSSKLHLLAIEISALAMSYHLYSAIRHLFI 245
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Z8S3|A0A1S2Z8S3_CICAR (succinate dehydrogenase subunit 3-1, mitochondrial-like OS=Cicer arietinum OX=3827 GN=LOC101495449 PE=4 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.827e-108
Identity = 183/239 (76.57%), Postives = 202/239 (84.52%), Query Frame = 0 
Query:    1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEENPTKRYTVG---GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            MS+LLRSTK+KLLSSSSSLSR FSSIPRS NQI  ++P A +LFH  ++TLP A+ENPTK +  G     +N + +LRYQA GLD NVLAGARY   A  AKSPML G+NA+MARN ERSV AD LGLA QRRFMSDIPS TSE KP SGFRPLSPHLPVYQPQLSSTLSI NRI+GAFL+AV LLFYMIYMK GLV+LTYDSFYQFVFYSSKL+LLA+EISALAMSYHLYSAIRHLFI
Sbjct:    1 MSWLLRSTKTKLLSSSSSLSRTFSSIPRSTNQIEPLSPVAAQLFHPTTSTLPTADENPTKVHANGLPNNPANKLGALRYQAFGLDTNVLAGARYATIARAAKSPMLSGLNALMARNSERSVGADPLGLAVQRRFMSDIPSKTSETKP-SGFRPLSPHLPVYQPQLSSTLSIINRISGAFLSAVVLLFYMIYMKTGLVSLTYDSFYQFVFYSSKLNLLALEISALAMSYHLYSAIRHLFI 238
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371HWQ3|A0A371HWQ3_MUCPR (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Mucuna pruriens OX=157652 GN=SDH3-2 PE=4 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 8.631e-105
Identity = 165/249 (66.27%), Postives = 196/249 (78.71%), Query Frame = 0 
Query:    1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNN---QIGSITPAATELFHRNSATLPIAEENPTKRY----------TVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            MS LLRSTK+KL+SSS  LSR F S+ R N+   QIG+++P   +LFHRN+AT+P+A+EN   R            +G +SN I+S  Y+A GLD +VLAGARYG K   A+ PMLLGVN +MAR+FER + A TLG+ G +RFMSD PS TSE  P SGFRPLSPHLP+YQPQLSSTLSICNRIAGAFLA V LLFYMIYMK+GLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct:    1 MSRLLRSTKAKLISSS--LSRTFPSLSRPNHDLPQIGTLSPLP-DLFHRNTATMPLAKENAAGRNLTGLPRDPANKLGTNSNAISSSMYKASGLDISVLAGARYGTKVWAAQGPMLLGVNTVMARSFERGMEAGTLGMIGHKRFMSDSPSKTSETNP-SGFRPLSPHLPIYQPQLSSTLSICNRIAGAFLAGVILLFYMIYMKVGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 245
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445KG42|A0A445KG42_GLYSO (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_016261 PE=4 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.317e-95
Identity = 167/252 (66.27%), Postives = 196/252 (77.78%), Query Frame = 0 
Query:    1 MSYLLRSTKSKLLSSSSSLS----RAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            MS+LLRSTKSKLLSSSSS S    R F S+PR   QIG+I+P   +LFHRN+AT+P A+EN            P  +  +G DS+  NS RY+A GL+ NVLAGARY ++   A+  M LGVN +MAR+FERS+ A TLG+ G +RFMSDIPS TSE  P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLA V L+FYMIYMKLGLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct:    1 MSWLLRSTKSKLLSSSSSSSSSLSRTFPSLPRP--QIGAISPLP-DLFHRNTATMPFAKENASGGNLTGLPKVPANK--LGSDSDATNSPRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 246
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|C6SVE8|C6SVE8_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max OX=3847 GN=100499683 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.356e-94
Identity = 170/251 (67.73%), Postives = 195/251 (77.69%), Query Frame = 0 
Query:    1 MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNN-----QIGSITPAATELFHRNSATLPIAEENPTK----------RYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            MS+LLRSTKSKLLSSSSSLSR F S+ RS       QIG+I+P   +LFHRN+AT+P A+EN +             T+G DSN INS RY+A GLD NVLAGAR  +    A+ PM L VN +MAR+FERS+ A TLG+ G +RFMSDIPS TSE    SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLA V LLFYMIYMKLGLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct:    1 MSWLLRSTKSKLLSSSSSLSRTFPSLSRSGPTLDLPQIGAISPLP-DLFHRNTATMPFAKENASGGNLAGLPKVPANTLGSDSNAINSPRYKASGLDTNVLAGARCVSGVWAAQGPMRLVVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNL-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 249
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|I1KFD0|I1KFD0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G305600 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.485e-92
Identity = 147/224 (65.62%), Postives = 175/224 (78.12%), Query Frame = 0 
Query:   25 SIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            S+PR   QIG+I+P   +LFHRN+AT+P A+EN            P  +  +G DS+  NS RY+A GL+ NVLAGARY ++   A+  M LGVN +MAR+FERS+ A TLG+ G +RFMSDIPS TSE  P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLA V L+FYMIYMKLGLV+LTYDSFYQF+FYSSKL+LL +EISALA+SYHLYSAIRHLF+
Sbjct:   27 SLPRP--QIGAISPLP-DLFHRNTATMPFAKENASGGNLTGLPKVPANK--LGSDSDATNSSRYKASGLNTNVLAGARYVSRVWAAQGQMPLGVNTVMARSFERSMEAGTLGMIGHKRFMSDIPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYSSKLNLLVMEISALAVSYHLYSAIRHLFL 244
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SBR9|A0A0S3SBR9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G150900 PE=4 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.462e-92
Identity = 146/231 (63.20%), Postives = 177/231 (76.62%), Query Frame = 0 
Query:   18 SLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            S SR    +P  +NQIG+++P  T+LFHRN+A+ P+A+EN            P  +  +G DSN I+SL Y+A GL   VLAGARYG +   A+SPML+GVN +MAR+FERS+ A T G+ G +R MSD+PS TSE  P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLAAV LLFYMIY+K+G V+LTYDSFYQF+FYSSKLHL  +EISALA++YHLYSAIRHL I
Sbjct:   26 SFSRTAHQLP--HNQIGALSPL-TDLFHRNTASTPLAKENAFGGNVTGLPKVPANK--LGCDSNAIDSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKMGSVSLTYDSFYQFIFYSSKLHLFVMEISALAVTYHLYSAIRHLRI 250
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V5N3|A0A0L9V5N3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g119700 PE=4 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.462e-92
Identity = 146/231 (63.20%), Postives = 177/231 (76.62%), Query Frame = 0 
Query:   18 SLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            S SR    +P  +NQIG+++P  T+LFHRN+A+ P+A+EN            P  +  +G DSN I+SL Y+A GL   VLAGARYG +   A+SPML+GVN +MAR+FERS+ A T G+ G +R MSD+PS TSE  P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLAAV LLFYMIY+K+G V+LTYDSFYQF+FYSSKLHL  +EISALA++YHLYSAIRHL I
Sbjct:   26 SFSRTAHQLP--HNQIGALSPL-TDLFHRNTASTPLAKENAFGGNVTGLPKVPANK--LGCDSNAIDSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTSETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKMGSVSLTYDSFYQFIFYSSKLHLFVMEISALAVTYHLYSAIRHLRI 250
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VP35|A0A1S3VP35_VIGRR (uncharacterized protein LOC106777138 OS=Vigna radiata var. radiata OX=3916 GN=LOC106777138 PE=4 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 6.669e-92
Identity = 147/231 (63.64%), Postives = 177/231 (76.62%), Query Frame = 0 
Query:   18 SLSRAFSSIPRSNNQIGSITPAATELFHRNSATLPIAEEN------------PTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 236
            S SR    +P  +NQIG+++P  T+LFHRN+A+ P+A+EN            P  +  +G DSN INSL Y+A GL   VLAGARYG +   A+SPML+GVN +MAR+FERS+ A T G+ G +R MSD+PS T E  P SGFRPLSPHLP+YQPQLSSTLSI NRIAGAFLAAV LLFYMIY+K+G V+LTYDSFYQF+FYSSKLHLL +EISALA++YHLYSAIRHL I
Sbjct:   26 SFSRTAHHLP--HNQIGALSPL-TDLFHRNTASTPLAKENASGGNVTGLPKVPANK--LGCDSNPINSLMYKASGLYTTVLAGARYGTRGSAAQSPMLMGVNTVMARSFERSMEAGTFGMIGHKRCMSDVPSKTCETNP-SGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAAVILLFYMIYIKVGSVSLTYDSFYQFIFYSSKLHLLVMEISALAVTYHLYSAIRHLRI 250
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0DKI1|SDH32_ARATH (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-2 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.331e-24
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 
Query:   66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
            G   V+N +    LG + N +   R  +K+  A       V A + R+F        L +   +R  S    DI +T  E K  S FRPLSPHL VYQPQ++S LSI NRI+G +L  VT   Y++Y+K+G++ LTY SFYQ ++++ +   +   ++ALA  YH
Sbjct:   51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0DKI0|SDH31_ARATH (Succinate dehydrogenase subunit 3-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.331e-24
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 
Query:   66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
            G   V+N +    LG + N +   R  +K+  A       V A + R+F        L +   +R  S    DI +T  E K  S FRPLSPHL VYQPQ++S LSI NRI+G +L  VT   Y++Y+K+G++ LTY SFYQ ++++ +   +   ++ALA  YH
Sbjct:   51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P35721|C560_MARPO (Succinate dehydrogenase cytochrome b560 subunit OS=Marchantia polymorpha OX=3197 GN=SDH3 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.795e-13
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 0 
Query:  149 RPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLT----YDSFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHL 234
            RPLSPHL +Y+PQL+ST SI +RI+GAFLA +  LF +++ K+G ++LT    Y  F+   FY +   +  V  + LA+ YH+ + +RHL
Sbjct:    5 RPLSPHLTIYKPQLTSTFSIFHRISGAFLATMV-LFSILFFKIGDLSLTFYHFYQYFFFLTFYLNWFIISLVNFTLLALCYHMSNGVRHL 93
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q42669|ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon OX=3657 GN=ACO PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.233e-11
Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = 0 
Query:   73 SLRYQALGLDPNVLAGARYG---AKACTAKSPMLLGVNAMMARNFER------------------SVAADTLGLAGQRRFMSDIPSTTSEIKP 144
            ++RY++ G D  +LAGA YG   ++   AK PMLLGV A++A++FER                     AD+LGL G  RF  D+PS   EI+P
Sbjct:  625 AMRYKSEGQDTIILAGAEYGIGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFTIDLPSNVGEIRP 717
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT5G09600.3 (| succinate dehydrogenase 3-1 | Chr5:2979220-2980527 FORWARD LENGTH=213 | 201606)

HSP 1 Score: 100.138 bits (248), Expect = 1.362e-25
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 
Query:   66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
            G   V+N +    LG + N +   R  +K+  A       V A + R+F        L +   +R  S    DI +T  E K  S FRPLSPHL VYQPQ++S LSI NRI+G +L  VT   Y++Y+K+G++ LTY SFYQ ++++ +   +   ++ALA  YH
Sbjct:   51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT5G09600.1 (| succinate dehydrogenase 3-1 | Chr5:2979220-2980527 FORWARD LENGTH=213 | 201606)

HSP 1 Score: 100.138 bits (248), Expect = 1.362e-25
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 
Query:   66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
            G   V+N +    LG + N +   R  +K+  A       V A + R+F        L +   +R  S    DI +T  E K  S FRPLSPHL VYQPQ++S LSI NRI+G +L  VT   Y++Y+K+G++ LTY SFYQ ++++ +   +   ++ALA  YH
Sbjct:   51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT4G32210.1 (| succinate dehydrogenase 3-2 | Chr4:15556732-15558041 REVERSE LENGTH=213 | 201606)

HSP 1 Score: 100.138 bits (248), Expect = 1.362e-25
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 
Query:   66 GDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
            G   V+N +    LG + N +   R  +K+  A       V A + R+F        L +   +R  S    DI +T  E K  S FRPLSPHL VYQPQ++S LSI NRI+G +L  VT   Y++Y+K+G++ LTY SFYQ ++++ +   +   ++ALA  YH
Sbjct:   51 GSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 202
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT5G09600.2 (| succinate dehydrogenase 3-1 | Chr5:2979777-2980527 FORWARD LENGTH=186 | 201606)

HSP 1 Score: 99.3673 bits (246), Expect = 1.408e-25
Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 0 
Query:   65 GGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKSPMLLGVNAMMARNFERSVAADTLGLAGQRRFMS----DIPSTTSEIKPPSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYH 226
            G    V+N +    LG + N +   R  +K+  A       V A + R+F        L +   +R  S    DI +T  E K  S FRPLSPHL VYQPQ++S LSI NRI+G +L  VT   Y++Y+K+G++ LTY SFYQ ++++ +   +   ++ALA  YH
Sbjct:   23 GRSKPVVNDILGTGLGTN-NAIREEREKSKSTEAAI-----VGAQLTRSFR------ALDVGTSKRLFSTISGDIKTTQEEPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLYHTQQQLPVITSVTALAAIYH 175
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT4G35830.2 (| aconitase 1 | Chr4:16973007-16977278 REVERSE LENGTH=795 | 201606)

HSP 1 Score: 58.9214 bits (141), Expect = 7.714e-10
Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0 
Query:   73 SLRYQALGLDPNVLAGARYGAKAC---TAKSPMLLGVNAMMARNFER------------------SVAADTLGLAGQRRFMSDIPSTTSEIKP 144
            +++Y+  G D  +LAGA YG+ +     AK PMLLGV A+++++FER                     A+TLGL GQ  +  ++P+  SEIKP
Sbjct:  658 AMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKP 750
[Close]
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Match: AT4G35830.1 (| aconitase 1 | Chr4:16973007-16977949 REVERSE LENGTH=898 | 201606)

HSP 1 Score: 58.9214 bits (141), Expect = 7.841e-10
Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 0 
Query:   73 SLRYQALGLDPNVLAGARYGAKAC---TAKSPMLLGVNAMMARNFER------------------SVAADTLGLAGQRRFMSDIPSTTSEIKP 144
            +++Y+  G D  +LAGA YG+ +     AK PMLLGV A+++++FER                     A+TLGL GQ  +  ++P+  SEIKP
Sbjct:  761 AMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKP 853
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2Z6N7R8|A0A2Z6N7R8_TRISU7.235e-11877.64Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|G7JDI5|G7JDI5_MEDTR2.623e-10872.69Putative succinate dehydrogenase (Quinone) OS=Medi... [more]
tr|A0A1S2Z8S3|A0A1S2Z8S3_CICAR5.827e-10876.57succinate dehydrogenase subunit 3-1, mitochondrial... [more]
tr|A0A371HWQ3|A0A371HWQ3_MUCPR8.631e-10566.27Succinate dehydrogenase subunit 3-2, mitochondrial... [more]
tr|A0A445KG42|A0A445KG42_GLYSO1.317e-9566.27Succinate dehydrogenase subunit 3-2, mitochondrial... [more]
tr|C6SVE8|C6SVE8_SOYBN1.356e-9467.73Uncharacterized protein (Fragment) OS=Glycine max ... [more]
tr|I1KFD0|I1KFD0_SOYBN1.485e-9265.63Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0S3SBR9|A0A0S3SBR9_PHAAN3.462e-9263.20Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9V5N3|A0A0L9V5N3_PHAAN3.462e-9263.20Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A1S3VP35|A0A1S3VP35_VIGRR6.669e-9263.64uncharacterized protein LOC106777138 OS=Vigna radi... [more]
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BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
sp|P0DKI1|SDH32_ARATH1.331e-2437.58Succinate dehydrogenase subunit 3-2, mitochondrial... [more]
sp|P0DKI0|SDH31_ARATH1.331e-2437.58Succinate dehydrogenase subunit 3-1, mitochondrial... [more]
sp|P35721|C560_MARPO2.795e-1344.44Succinate dehydrogenase cytochrome b560 subunit OS... [more]
sp|Q42669|ACOC_CUCMC3.233e-1139.78Aconitate hydratase (Fragment) OS=Cucumis melo var... [more]
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BLAST of Vfaba.Hedin2.R1.6g015840.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 6
Match NameE-valueIdentityDescription
AT5G09600.31.362e-2537.58| succinate dehydrogenase 3-1 | Chr5:2979220-29805... [more]
AT5G09600.11.362e-2537.58| succinate dehydrogenase 3-1 | Chr5:2979220-29805... [more]
AT4G32210.11.362e-2537.58| succinate dehydrogenase 3-2 | Chr4:15556732-1555... [more]
AT5G09600.21.408e-2537.35| succinate dehydrogenase 3-1 | Chr5:2979777-29805... [more]
AT4G35830.27.714e-1036.56| aconitase 1 | Chr4:16973007-16977278 REVERSE LEN... [more]
AT4G35830.17.841e-1036.56| aconitase 1 | Chr4:16973007-16977949 REVERSE LEN... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitGENE3D1.20.1300.10Fumarate reductase/succinate dehydrogenase, transmembrane subunitcoord: 143..236
e-value: 6.0E-19
score: 70.4
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitSUPERFAMILY81343Fumarate reductase respiratory complex transmembrane subunitscoord: 145..235
IPR000701Succinate dehydrogenase/fumarate reductase type B, transmembrane subunitPFAMPF01127Sdh_cytcoord: 149..236
e-value: 1.8E-11
score: 44.2
IPR014314Succinate dehydrogenase, cytochrome b556 subunitPANTHERPTHR10978SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNITcoord: 109..235
IPR014314Succinate dehydrogenase, cytochrome b556 subunitCDDcd03499SQR_TypeC_SdhCcoord: 149..235
e-value: 1.39667E-18
score: 76.8047

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.6g015840.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g015840.1; organism=Vicia faba; type=mRNA; length=711bp
ATGTCTTATCTCCTCCGATCAACCAAATCTAAGCTCTTATCTTCCTCTTC
TTCTCTCTCTAGAGCCTTCTCCTCCATCCCCCGCTCCAACAACCAGATCG
GTTCCATCACTCCCGCCGCCACCGAACTCTTCCACCGCAACTCCGCCACT
CTCCCCATCGCCGAAGAAAACCCTACCAAGAGATACACGGTTGGTGGTGA
TTCTAATGTCATCAATTCTTTGAGATACCAGGCTCTTGGACTGGACCCTA
ATGTACTGGCTGGAGCTAGATATGGCGCTAAAGCTTGTACTGCCAAGAGT
CCAATGCTATTGGGAGTCAATGCTATGATGGCAAGAAACTTTGAGAGAAG
TGTGGCTGCTGACACGTTGGGACTTGCTGGCCAGAGACGTTTTATGAGTG
ACATCCCAAGTACAACCAGTGAAATTAAGCCGCCTTCCGGTTTTCGCCCG
TTATCTCCTCATCTTCCTGTTTATCAGCCCCAGCTTTCTTCAACGCTTTC
AATTTGCAATAGAATTGCCGGAGCTTTCCTAGCAGCTGTCACCTTGCTTT
TTTATATGATATACATGAAATTGGGTTTGGTCACTCTCACCTATGATTCA
TTCTACCAGTTTGTATTCTATTCATCAAAACTTCACCTACTCGCAGTTGA
GATTTCTGCCTTAGCCATGTCCTATCATCTGTATAGTGCAATTCGTCACT
TATTCATATGA
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protein sequence of Vfaba.Hedin2.R1.6g015840.1_vfh_v1

>Vfaba.Hedin2.R1.6g015840.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=236bp
MSYLLRSTKSKLLSSSSSLSRAFSSIPRSNNQIGSITPAATELFHRNSAT
LPIAEENPTKRYTVGGDSNVINSLRYQALGLDPNVLAGARYGAKACTAKS
PMLLGVNAMMARNFERSVAADTLGLAGQRRFMSDIPSTTSEIKPPSGFRP
LSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDS
FYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI
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mRNA from alignment at chr6:127907850..127910693+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.6g015840.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g015840.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g015840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr6:127907850..127910693+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR034804SQR/QFR_C/D
IPR000701SuccDH_FuR_B_TM-su
IPR014314Succ_DH_cytb556
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0045281obsolete succinate dehydrogenase complex
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0000104succinate dehydrogenase activity
GO:0009055electron transfer activity
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle