Vfaba.Hedin2.R1.6g020240.1

Transcript Overview
NameVfaba.Hedin2.R1.6g020240.1
Unique NameVfaba.Hedin2.R1.6g020240.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length981
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:158514947..158518618 -Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR524Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR531Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR589Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL167Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL549Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL699Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL705Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL082Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL243Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL544Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0691Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0884Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0949Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL101Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL080Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL310Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL186Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL534Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL266Pisum sativum Cameor genome v1aPisum sativum
psvfhL528Pisum sativum Cameor genome v1aPisum sativum
psvfhL744Pisum sativum Cameor genome v1aPisum sativum
psvfhL800Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL113Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvfhL211Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL118Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL368Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL418Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR642Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR690Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL110Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL318Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0304Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0307Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1023Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1087Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1179Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1190Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR669Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR677Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR582Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR668Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR694Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR628Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR750Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL080Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL212Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL490Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL113Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL549Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL702Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL712Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL061Cicer arietinum
carvfhL216Cicer arietinum
carvfhL504Cicer arietinum
ccavfhL112Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL371Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL432Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR784Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR818Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR825Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR656Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR716Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR738Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL479Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL614Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL672Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR772Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR807Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR816Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL078Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL187Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL497Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL505Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR597Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR643Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_15164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Phvul.011G096200.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_06G01064.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr11.1205Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_03157Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_022345Cajanus cajan Asha genome v1.0Cajanus cajan
Psat7g187240.1Pisum sativum Cameor genome v1aPisum sativum
rna-KK1_034621Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004506144.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun11g124900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan08g134800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
jg7715.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
PvulFLAVERTChr11.1000605Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058877379.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va08G058350.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun11g124900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_014637772.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigan.06G161900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.06G146900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat07G0438500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.6g015320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g020240Vfaba.Hedin2.R1.6g020240_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158514947..158515051Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158515366..158515525Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158515636..158515725Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158516246..158516280Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158516585..158516665Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158516809..158516865Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158517071..158517175Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158517357..158517526Vicia fabaexon
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-exonVfaba.Hedin2.R1.6g020240.1_vfh_v1-exon-chr6_vfh_v1:158518441..158518618Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158514947..158515051Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158515366..158515525Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158515636..158515725Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158516246..158516280Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158516585..158516665Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158516809..158516865Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158517071..158517175Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158517357..158517526Vicia fabaCDS
Vfaba.Hedin2.R1.6g020240.1_vfh_v1-cdsVfaba.Hedin2.R1.6g020240.1_vfh_v1-cds-chr6_vfh_v1:158518441..158518618Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g020240.1_vfh_v1Vfaba.Hedin2.R1.6g020240.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.6g020240.1_vfh_v1Vfaba.Hedin2.R1.6g020240.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YKY3|A0A1S2YKY3_CICAR (uncharacterized protein LOC101499188 OS=Cicer arietinum OX=3827 GN=LOC101499188 PE=4 SV=1)

HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0
Identity = 264/328 (80.49%), Postives = 283/328 (86.28%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSP-FPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNS--DGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            MDTL RI FLS CYTFQFPKT ALSP F TAFSTTT  V  LRAA             TTVSD DE+VLQIFLK+RELNGDFVSRTSDL+W+MN RNSGDYD S+LT ++ SQQ EQIIETNS  DGGFLKLSSTQEWLLGDNSAP+N+K+TAK IQDNRARLKKL  L+YQSLKRELLLLSVGIGLACSGYCL+  SVQAALSYA+GVLFSC+YLQLLYQHAD+ISSE VPQIF KKKSK IGIRSEDL DF E+TI+GSGISLSSPRLVIPAAIYGLWA+SHQY T+DLFDFQLVPAM GMFVYKAAALVQVYRDNK LGF FPED
Sbjct:    1 MDTLSRITFLSTCYTFQFPKTCALSPPFSTAFSTTTPIVSALRAA-----------PPTTVSDDDEDVLQIFLKERELNGDFVSRTSDLLWQMNFRNSGDYDVSKLT-SDTSQQIEQIIETNSVSDGGFLKLSSTQEWLLGDNSAPINKKLTAKIIQDNRARLKKLNKLQYQSLKRELLLLSVGIGLACSGYCLITLSVQAALSYAIGVLFSCVYLQLLYQHADSISSETVPQIFMKKKSKKIGIRSEDLEDFLEKTIKGSGISLSSPRLVIPAAIYGLWAVSHQYITSDLFDFQLVPAMFGMFVYKAAALVQVYRDNKGLGFVFPED 316          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396I6X6|A0A396I6X6_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0026091 PE=4 SV=1)

HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0
Identity = 271/320 (84.69%), Postives = 290/320 (90.62%), Query Frame = 0
Query:    7 IRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPEDY 326
            IRF+SNCYTFQF KTP+ SPFPTAFST T FV  LRA+RTTT TT      TTVSDVDE+VLQ FLKDRELNGDFVSRT DL+WRM+ R+SGDYD SEL D+NN+QQ EQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTI DNRARLKKL ALKYQSLK+ELLLLSVGIGL CSGYCLVVFSVQAA+SYA+GVLFSCLYLQLLYQ ADNISSE VPQIF KKKSK IGIRSEDL+D FE+TIRGSGI+LSSPRLVIPAAIYGLWA+SHQYF NDL DFQLVPAM GMFVYKAAALVQVYRDNK+LGFEFPE++
Sbjct:    4 IRFVSNCYTFQFSKTPSFSPFPTAFSTYTPFVSSLRASRTTTATT------TTVSDVDEDVLQTFLKDRELNGDFVSRTCDLLWRMDIRDSGDYDVSELNDDNNAQQIEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTILDNRARLKKLNALKYQSLKKELLLLSVGIGLGCSGYCLVVFSVQAAISYAIGVLFSCLYLQLLYQQADNISSETVPQIFMKKKSKKIGIRSEDLSDSFEKTIRGSGIALSSPRLVIPAAIYGLWAVSHQYFINDLLDFQLVPAMFGMFVYKAAALVQVYRDNKDLGFEFPEEF 317          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072UL78|A0A072UL78_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=MTR_4g052500 PE=4 SV=1)

HSP 1 Score: 493.041 bits (1268), Expect = 4.614e-170
Identity = 258/304 (84.87%), Postives = 274/304 (90.13%), Query Frame = 0
Query:    7 IRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQ 310
            IRF+SNCYTFQF KTP+ SPFPTAFST T FV  LRA+RTTT TT      TTVSDVDE+VLQ FLKDRELNGDFVSRT DL+WRM+ R+SGDYD SEL D+NN+QQ EQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTI DNRARLKKL ALKYQSLK+ELLLLSVGIGL CSGYCLVVFSVQAA+SYA+GVLFSCLYLQLLYQ ADNISSE VPQIF KKKSK IGIRSEDL+D FE+TIRGSGI+LSSPRLVIPAAIYGLWA+SHQYF NDL DFQLVPAM GMFVYKAAALVQ
Sbjct:    4 IRFVSNCYTFQFSKTPSFSPFPTAFSTYTPFVSSLRASRTTTATT------TTVSDVDEDVLQTFLKDRELNGDFVSRTCDLLWRMDIRDSGDYDVSELNDDNNAQQIEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTILDNRARLKKLNALKYQSLKKELLLLSVGIGLGCSGYCLVVFSVQAAISYAIGVLFSCLYLQLLYQQADNISSETVPQIFMKKKSKKIGIRSEDLSDSFEKTIRGSGIALSSPRLVIPAAIYGLWAVSHQYFINDLLDFQLVPAMFGMFVYKAAALVQ 301          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0HV42|A0A0R0HV42_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100779185 PE=4 SV=1)

HSP 1 Score: 478.789 bits (1231), Expect = 7.541e-168
Identity = 240/325 (73.85%), Postives = 266/325 (81.85%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            MDTL RIRFL  CY+ QFPK  ALS FP AFST T  V  LR                +VSD DE+VLQIF K+RELNGDF+SR SDL+WR + R+SGDYD SELTDN  SQQ EQIIET+SDGGFLKL+ TQEWL GDNS P+N+K+TAK +QD+ AR  KL  LKY+SLKRELLLLSVGIGLACSGYCLV+FSVQAA+SYA+GVLFSCLYLQLLYQHADN+SSE+VPQIF+KKKSK IGIRSEDL DF ERTI+GSGISLSSPRLVIPA IYGLW L HQYFTND+FDFQLVPAM GMFVYKAA LVQ YRDN+ L F FPE+
Sbjct:    1 MDTLSRIRFLPTCYSLQFPKISALSRFPNAFSTATPLVSVLR----------VRAGPPSVSDTDEDVLQIFFKERELNGDFISRASDLLWRRDFRSSGDYDISELTDNT-SQQIEQIIETDSDGGFLKLTRTQEWLTGDNSPPINKKVTAKALQDSSARRMKLNMLKYESLKRELLLLSVGIGLACSGYCLVIFSVQAAISYAIGVLFSCLYLQLLYQHADNLSSEDVPQIFKKKKSKKIGIRSEDLEDFLERTIKGSGISLSSPRLVIPATIYGLWILFHQYFTNDIFDFQLVPAMFGMFVYKAAVLVQAYRDNEGLRFVFPEN 314          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445I2U5|A0A445I2U5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_030118 PE=4 SV=1)

HSP 1 Score: 478.789 bits (1231), Expect = 7.541e-168
Identity = 240/325 (73.85%), Postives = 266/325 (81.85%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            MDTL RIRFL  CY+ QFPK  ALS FP AFST T  V  LR                +VSD DE+VLQIF K+RELNGDF+SR SDL+WR + R+SGDYD SELTDN  SQQ EQIIET+SDGGFLKL+ TQEWL GDNS P+N+K+TAK +QD+ AR  KL  LKY+SLKRELLLLSVGIGLACSGYCLV+FSVQAA+SYA+GVLFSCLYLQLLYQHADN+SSE+VPQIF+KKKSK IGIRSEDL DF ERTI+GSGISLSSPRLVIPA IYGLW L HQYFTND+FDFQLVPAM GMFVYKAA LVQ YRDN+ L F FPE+
Sbjct:    1 MDTLSRIRFLPTCYSLQFPKISALSRFPNAFSTATPLVSVLR----------VRAGPPSVSDTDEDVLQIFFKERELNGDFISRASDLLWRRDFRSSGDYDISELTDNT-SQQIEQIIETDSDGGFLKLTRTQEWLTGDNSPPINKKVTAKALQDSSARRMKLNMLKYESLKRELLLLSVGIGLACSGYCLVIFSVQAAISYAIGVLFSCLYLQLLYQHADNLSSEDVPQIFKKKKSKKIGIRSEDLEDFLERTIKGSGISLSSPRLVIPATIYGLWILFHQYFTNDIFDFQLVPAMFGMFVYKAAVLVQAYRDNEGLRFVFPEN 314          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|I1LRI8|I1LRI8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100779930 PE=4 SV=1)

HSP 1 Score: 473.396 bits (1217), Expect = 1.201e-165
Identity = 236/325 (72.62%), Postives = 264/325 (81.23%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            MDTL RIRFL  CY+ Q PK  ALS FP AFS TTH V  LR             +  +VS+ DE+VLQIF K+RELNGDF+SR SDL+WR + R+SGDYD SELT NN SQQTEQIIET++D GFLKL+ TQEWL GDNS P+N K+TAK +QD+ AR KKL  LKY+SLKRELLLLSVGIGLACSGYCLV+ SVQ A+SYA+GVLFSCLYLQLLYQHADN+SSE+VPQIF+KKKSK IGIRSEDL DF ERTI+GSGISLSSPRLVIPA IYGLW L HQYFTND+FDFQLVPAM GMFVYKAA LVQ YRDN+ L   FPE+
Sbjct:    1 MDTLSRIRFLPTCYSLQLPKISALSRFPNAFSKTTHQVSVLR----------VRASRPSVSNADEDVLQIFFKERELNGDFISRASDLLWRRDFRSSGDYDISELT-NNTSQQTEQIIETDNDAGFLKLTRTQEWLTGDNSPPINTKVTAKALQDSSARRKKLNMLKYESLKRELLLLSVGIGLACSGYCLVILSVQVAISYAIGVLFSCLYLQLLYQHADNLSSEDVPQIFKKKKSKKIGIRSEDLEDFLERTIKGSGISLSSPRLVIPATIYGLWILFHQYFTNDIFDFQLVPAMFGMFVYKAAVLVQAYRDNERLRLVFPEN 314          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0HE34|A0A0R0HE34_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100779930 PE=4 SV=1)

HSP 1 Score: 473.781 bits (1218), Expect = 1.289e-165
Identity = 236/325 (72.62%), Postives = 264/325 (81.23%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            MDTL RIRFL  CY+ Q PK  ALS FP AFS TTH V  LR             +  +VS+ DE+VLQIF K+RELNGDF+SR SDL+WR + R+SGDYD SELT NN SQQTEQIIET++D GFLKL+ TQEWL GDNS P+N K+TAK +QD+ AR KKL  LKY+SLKRELLLLSVGIGLACSGYCLV+ SVQ A+SYA+GVLFSCLYLQLLYQHADN+SSE+VPQIF+KKKSK IGIRSEDL DF ERTI+GSGISLSSPRLVIPA IYGLW L HQYFTND+FDFQLVPAM GMFVYKAA LVQ YRDN+ L   FPE+
Sbjct:   10 MDTLSRIRFLPTCYSLQLPKISALSRFPNAFSKTTHQVSVLR----------VRASRPSVSNADEDVLQIFFKERELNGDFISRASDLLWRRDFRSSGDYDISELT-NNTSQQTEQIIETDNDAGFLKLTRTQEWLTGDNSPPINTKVTAKALQDSSARRKKLNMLKYESLKRELLLLSVGIGLACSGYCLVILSVQVAISYAIGVLFSCLYLQLLYQHADNLSSEDVPQIFKKKKSKKIGIRSEDLEDFLERTIKGSGISLSSPRLVIPATIYGLWILFHQYFTNDIFDFQLVPAMFGMFVYKAAVLVQAYRDNERLRLVFPEN 323          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445HMQ9|A0A445HMQ9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_033803 PE=4 SV=1)

HSP 1 Score: 470.315 bits (1209), Expect = 6.152e-164
Identity = 235/325 (72.31%), Postives = 263/325 (80.92%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            MDTL RIRF   CY+ Q PK  ALS FP AFS TTH V  LR             +  +VS+ DE+VLQIF K+RELNGDF+SR SDL+WR + R+SGDYD SELT NN SQQTEQIIET++D GFLKL+ TQEWL GDNS P+N K+TAK +QD+ AR KKL  LKY+SLKRELLLLSVGIGLACSGYCLV+ SVQ A+SYA+GVLFSCLYLQLLYQHADN+SSE+VPQIF+KKKSK IGIRSEDL DF ERTI+GSGISLSSPRLVIPA IYGLW L HQYFTND+FDFQLVPAM GMFVYKAA LVQ YRDN+ L   FPE+
Sbjct:   29 MDTLSRIRFPPTCYSLQLPKISALSRFPNAFSKTTHQVSVLR----------VRASRPSVSNADEDVLQIFFKERELNGDFISRASDLLWRRDFRSSGDYDISELT-NNTSQQTEQIIETDNDAGFLKLTRTQEWLTGDNSPPINTKVTAKALQDSSARRKKLNMLKYESLKRELLLLSVGIGLACSGYCLVILSVQVAISYAIGVLFSCLYLQLLYQHADNLSSEDVPQIFKKKKSKKIGIRSEDLEDFLERTIKGSGISLSSPRLVIPATIYGLWILFHQYFTNDIFDFQLVPAMFGMFVYKAAVLVQAYRDNERLRLVFPEN 342          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371HE65|A0A371HE65_MUCPR (Uncharacterized protein OS=Mucuna pruriens OX=157652 GN=CR513_15626 PE=4 SV=1)

HSP 1 Score: 455.677 bits (1171), Expect = 9.907e-159
Identity = 234/325 (72.00%), Postives = 261/325 (80.31%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            MDTL RIR L      QFPK  ALS FP AF TTT  V  LRA               +VSDVDE+VL+IF K+REL+GDF+SR SDL+WR N RN  DYD S+LT  N SQQTEQIIET+SDGGFLKL+ TQEWL GDNS P N+K+TAK +QD+ AR KKL  LKY+SLKRE+LLLSVGIGLAC GYCLVV SVQAA+SYA+GVLFSCLYLQLLYQHADN+SSENVPQIF+KKKSK IGIRSEDL DF ER+I+GS ISLSSPRLVIPAAI+GLW L H+YFTND FDFQLVPAM GMFVYKAAALVQVYRDN++L   FPE+
Sbjct:    1 MDTLSRIRVL------QFPKVSALSRFPNAFCTTTPLVSVLRAG------------PPSVSDVDEDVLEIFFKERELSGDFISRASDLLWRRNFRNFSDYDISKLT--NTSQQTEQIIETDSDGGFLKLTRTQEWLSGDNSPPTNKKVTAKVLQDSSARRKKLNMLKYESLKREILLLSVGIGLACCGYCLVVLSVQAAISYAIGVLFSCLYLQLLYQHADNLSSENVPQIFKKKKSKKIGIRSEDLEDFLERSIKGSSISLSSPRLVIPAAIFGLWVLFHRYFTNDFFDFQLVPAMFGMFVYKAAALVQVYRDNEDLQLVFPEN 305          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3THL1|A0A1S3THL1_VIGRR (uncharacterized protein LOC106755591 OS=Vigna radiata var. radiata OX=3916 GN=LOC106755591 PE=4 SV=1)

HSP 1 Score: 453.751 bits (1166), Expect = 6.613e-158
Identity = 230/325 (70.77%), Postives = 256/325 (78.77%), Query Frame = 0
Query:    1 MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDYDTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPED 325
            M+TL R      C + QFPK  ALS FP A STTT  V  LR                +VS  DE+VLQIF K+RELNGDF+SRTSDL+WR N RNSGDYD   LT NN SQ+TEQI  T++DGGFLKL+ TQEWL GDNS P+N+K+TAK +QD+ AR KKL  LKY+SLKRELLLLSVGIGLACSGYCLV+FSVQAA+SY +GVLFSCLYLQLLYQHADNIS+ENVPQIF+KKKSK IGIRSEDL DF ER+I+GS ISLSSPRLVIPA IYGLW L HQYF ND FDFQLVPAM GMFVYKAA LVQVYRDN+ L F FPE+
Sbjct:    1 METLSRFTLPPTCSSLQFPKISALSRFPNAISTTTPLVSVLRVR----------AGPPSVSSADEDVLQIFFKERELNGDFISRTSDLLWRRNFRNSGDYDIDTLT-NNTSQETEQITGTDNDGGFLKLTRTQEWLTGDNSPPINKKVTAKMLQDSSARRKKLNMLKYESLKRELLLLSVGIGLACSGYCLVIFSVQAAISYGIGVLFSCLYLQLLYQHADNISNENVPQIFKKKKSKKIGIRSEDLEDFLERSIKGSSISLSSPRLVIPATIYGLWVLFHQYFANDFFDFQLVPAMFGMFVYKAAVLVQVYRDNEGLRFVFPEN 314          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. Araport11
Match: AT5G22340.1 (| NF-kappa-B inhibitor-like protein | Chr5:7394509-7396554 FORWARD LENGTH=323 | 201606)

HSP 1 Score: 341.658 bits (875), Expect = 3.702e-117
Identity = 174/298 (58.39%), Postives = 212/298 (71.14%), Query Frame = 0
Query:   39 PPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMN-------NRNSGDYDTSELTDNNNSQQTEQIIETNSD--GGFLKLSSTQEWLLGD-NSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMFVYKAAALVQVYRDNKELGFEFPEDY 326
            PP R +       A + + + +  V+E+VLQ+F+KDRE NGDF+S+ SD +W          N N       EL D       E +I+   D   GFLKL  TQEW+  + +SAP+N+K  AK ++D+  R KK   LKY++LKREL+ LS+ IG  CSGYCL+  SVQAA+SYAVGVLFSCLYLQLLY +AD +S E VP IF KKKSK IGIRSEDL DF  RTIRGSG++LSSPRLVIPAAIYGLW LSH+YF NDLFDFQ+VPAMVG+FVYKAA LVQVYRDN++L F FP+DY
Sbjct:   33 PPNRNSHRLAAINAASRSVSEL--VEEDVLQMFMKDREENGDFISKVSDRLWLKEILESIDVNSNGASSSAVELDDTR-----ESLIDGADDDESGFLKLKPTQEWIGWESDSAPMNKKALAKALRDDSERRKKFNFLKYEALKRELMYLSIVIGTGCSGYCLLALSVQAAVSYAVGVLFSCLYLQLLYGYADGLSREAVPDIFLKKKSKKIGIRSEDLEDFVVRTIRGSGMALSSPRLVIPAAIYGLWILSHKYFQNDLFDFQIVPAMVGLFVYKAATLVQVYRDNQDLQFIFPDDY 323          
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. Araport11
Match: AT5G22340.2 (| NF-kappa-B inhibitor-like protein | Chr5:7394509-7396609 FORWARD LENGTH=340 | 201606)

HSP 1 Score: 286.574 bits (732), Expect = 2.799e-95
Identity = 149/273 (54.58%), Postives = 185/273 (67.77%), Query Frame = 0
Query:   39 PPLRAARTTTTTTATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMN-------NRNSGDYDTSELTDNNNSQQTEQIIETNSD--GGFLKLSSTQEWLLGD-NSAPVNRKMTAKTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAALSYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDFFERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGMF 301
            PP R +       A + + + +  V+E+VLQ+F+KDRE NGDF+S+ SD +W          N N       EL D       E +I+   D   GFLKL  TQEW+  + +SAP+N+K  AK ++D+  R KK   LKY++LKREL+ LS+ IG  CSGYCL+  SVQAA+SYAVGVLFSCLYLQLLY +AD +S E VP IF KKKSK IGIRSEDL DF  RTIRGSG++LSSPRLVIPAAIYGLW LSH+YF NDLFDFQ    +V ++
Sbjct:   33 PPNRNSHRLAAINAASRSVSEL--VEEDVLQMFMKDREENGDFISKVSDRLWLKEILESIDVNSNGASSSAVELDDTR-----ESLIDGADDDESGFLKLKPTQEWIGWESDSAPMNKKALAKALRDDSERRKKFNFLKYEALKRELMYLSIVIGTGCSGYCLLALSVQAAVSYAVGVLFSCLYLQLLYGYADGLSREAVPDIFLKKKSKKIGIRSEDLEDFVVRTIRGSGMALSSPRLVIPAAIYGLWILSHKYFQNDLFDFQFQQWLVCLY 298          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YKY3|A0A1S2YKY3_CICAR0.000e+080.49uncharacterized protein LOC101499188 OS=Cicer arie... [more]
tr|A0A396I6X6|A0A396I6X6_MEDTR0.000e+084.69Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A072UL78|A0A072UL78_MEDTR4.614e-17084.87Transmembrane protein, putative OS=Medicago trunca... [more]
tr|A0A0R0HV42|A0A0R0HV42_SOYBN7.541e-16873.85Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445I2U5|A0A445I2U5_GLYSO7.541e-16873.85Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1LRI8|I1LRI8_SOYBN1.201e-16572.62Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0R0HE34|A0A0R0HE34_SOYBN1.289e-16572.62Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445HMQ9|A0A445HMQ9_GLYSO6.152e-16472.31Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A371HE65|A0A371HE65_MUCPR9.907e-15972.00Uncharacterized protein OS=Mucuna pruriens OX=1576... [more]
tr|A0A1S3THL1|A0A1S3THL1_VIGRR6.613e-15870.77uncharacterized protein LOC106755591 OS=Vigna radi... [more]
back to top
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Vfaba.Hedin2.R1.6g020240.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G22340.13.702e-11758.39| NF-kappa-B inhibitor-like protein | Chr5:7394509... [more]
AT5G22340.22.799e-9554.58| NF-kappa-B inhibitor-like protein | Chr5:7394509... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34118NF-KAPPA-B INHIBITOR-LIKE PROTEIN-RELATEDcoord: 1..324

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.6g020240.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g020240.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g020240.1; organism=Vicia faba; type=mRNA; length=981bp
ATGGATACTCTTAAAAGAATTAGATTCCTCTCCAATTGTTACACTTTTCA
GTTCCCCAAAACCCCCGCATTATCTCCTTTCCCAACTGCTTTTTCCACCA
CCACACATTTTGTGCCACCACTAAGAGCTGCCCGAACCACCACCACCACC
ACCGCCACCGCCACCACCACTACAACAGTGAGCGACGTGGACGAGGAAGT
CTTGCAAATATTTTTAAAGGACAGAGAATTAAATGGGGATTTTGTATCAA
GAACTTCCGATTTAATATGGCGAATGAACAACAGAAACTCTGGTGATTAT
GACACTAGTGAGCTCACCGACAACAACAATTCTCAACAAACAGAACAGAT
CATAGAGACTAACAGCGATGGCGGTTTTTTGAAACTTTCAAGTACTCAAG
AGTGGTTATTAGGCGACAATTCCGCACCAGTAAACAGGAAGATGACTGCC
AAGACAATCCAAGACAACAGAGCGCGACTCAAGAAACTGGAGGCACTCAA
ATATCAATCTCTCAAGAGAGAATTACTACTTCTCTCTGTGGGTATTGGAT
TGGCTTGTAGCGGATATTGCTTGGTAGTTTTTTCTGTACAGGCTGCTTTA
AGTTATGCGGTTGGAGTCCTTTTCAGTTGCTTGTACCTTCAGCTCTTGTA
TCAACACGCAGACAACATATCAAGTGAAAACGTTCCTCAAATATTCAGGA
AAAAGAAATCGAAAACAATTGGTATAAGAAGCGAGGACCTTAATGATTTT
TTCGAGAGAACAATCAGGGGTAGCGGTATATCACTTTCATCTCCAAGGCT
CGTGATCCCAGCAGCAATTTATGGACTCTGGGCTTTGTCTCATCAGTATT
TTACCAATGACTTGTTTGATTTTCAGCTTGTGCCAGCCATGGTTGGGATG
TTTGTCTACAAGGCTGCTGCTCTAGTGCAAGTTTACAGAGACAATAAAGA
GTTAGGCTTTGAATTTCCGGAAGATTATTAA
back to top

protein sequence of Vfaba.Hedin2.R1.6g020240.1_vfh_v1

>Vfaba.Hedin2.R1.6g020240.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g020240.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g020240.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=326bp
MDTLKRIRFLSNCYTFQFPKTPALSPFPTAFSTTTHFVPPLRAARTTTTT
TATATTTTTVSDVDEEVLQIFLKDRELNGDFVSRTSDLIWRMNNRNSGDY
DTSELTDNNNSQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPVNRKMTA
KTIQDNRARLKKLEALKYQSLKRELLLLSVGIGLACSGYCLVVFSVQAAL
SYAVGVLFSCLYLQLLYQHADNISSENVPQIFRKKKSKTIGIRSEDLNDF
FERTIRGSGISLSSPRLVIPAAIYGLWALSHQYFTNDLFDFQLVPAMVGM
FVYKAAALVQVYRDNKELGFEFPEDY
back to top

mRNA from alignment at chr6:158514947..158518618-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.6g020240.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g020240.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g020240.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr6:158514947..158518618- (Vicia faba
back to top