Vfaba.Hedin2.R1.6g119480.1

Transcript Overview
NameVfaba.Hedin2.R1.6g119480.1
Unique NameVfaba.Hedin2.R1.6g119480.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length570
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:979539119..979539857 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR520Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR554Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL097Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL746Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL540Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL705Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0037Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0370Cajanus cajan Asha genome v1.0Cajanus cajan
pvvfhL308Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL672Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL414Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL179Pisum sativum Cameor genome v1aPisum sativum
psvfhL729Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL051Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL057Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL418Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR651Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR657Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL716Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0498Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0544Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1018Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR636Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR713Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR604Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR739Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR761Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL486Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL644Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL324Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL775Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL474Cicer arietinum
carvfhL650Cicer arietinum
ccavfhL056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL573Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR724Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR756Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR653Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR712Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL090Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL099Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL162Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR715Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR725Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR730Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR743Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL299Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL391Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL860Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR604Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR609Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_06411Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun03g183100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
XM_058874779.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg29322.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan01g138900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_15208.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va01G064600.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.01G285800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat7g120680.1Pisum sativum Cameor genome v1aPisum sativum
Psat07G0312700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_014652150.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_23102Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
PvulFLAVERTChr03.1001700Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_27914Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr03.3589Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.01G198400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_01G02124.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004505116.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.003G295900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun03g183100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Ca_16835.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cc_v2.0_00912.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_028416Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.6g095120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g119480Vfaba.Hedin2.R1.6g119480_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g119480.1_vfh_v1-exonVfaba.Hedin2.R1.6g119480.1_vfh_v1-exon-chr6_vfh_v1:979539119..979539302Vicia fabaexon
Vfaba.Hedin2.R1.6g119480.1_vfh_v1-exonVfaba.Hedin2.R1.6g119480.1_vfh_v1-exon-chr6_vfh_v1:979539388..979539461Vicia fabaexon
Vfaba.Hedin2.R1.6g119480.1_vfh_v1-exonVfaba.Hedin2.R1.6g119480.1_vfh_v1-exon-chr6_vfh_v1:979539546..979539857Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g119480.1_vfh_v1-cdsVfaba.Hedin2.R1.6g119480.1_vfh_v1-cds-chr6_vfh_v1:979539119..979539302Vicia fabaCDS
Vfaba.Hedin2.R1.6g119480.1_vfh_v1-cdsVfaba.Hedin2.R1.6g119480.1_vfh_v1-cds-chr6_vfh_v1:979539388..979539461Vicia fabaCDS
Vfaba.Hedin2.R1.6g119480.1_vfh_v1-cdsVfaba.Hedin2.R1.6g119480.1_vfh_v1-cds-chr6_vfh_v1:979539546..979539857Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g119480.1_vfh_v1Vfaba.Hedin2.R1.6g119480.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.6g119480.1_vfh_v1Vfaba.Hedin2.R1.6g119480.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MS01|A0A2K3MS01_TRIPR (Maternal effect embryo arrest 14 protein OS=Trifolium pratense OX=57577 GN=L195_g016658 PE=4 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 6.775e-100
Identity = 156/208 (75.00%), Postives = 176/208 (84.62%), Query Frame = 0
Query:    1 MNSSALLHPSSPL-IF-------HRNRT-----------IICSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            MNS+ LL PS P  +F       HRNRT           IIC SSRNQSYIPKLEPF+R+KIDR+AK+LPLI+K+E DL DYCSTL+GDECYSCWQAY ELKDLEKESP+A+IERLII+IGGVKSLIGC+HGIALMHKLKK+G  +A EIES +EQNLCPRPDGLPKSADE+MEEE+A+MPDSSYTKLLRSMGK PAWYS+APDHETD
Sbjct:    1 MNSATLLGPSPPRPLFLETHDHLHRNRTNKLSSSSSSSSIICCSSRNQSYIPKLEPFNRTKIDRLAKDLPLIQKTENDLLDYCSTLEGDECYSCWQAYSELKDLEKESPKAEIERLIIQIGGVKSLIGCLHGIALMHKLKKNGFNVAKEIES-EEQNLCPRPDGLPKSADEIMEEEQAKMPDSSYTKLLRSMGKYPAWYSKAPDHETD 207          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YI74|A0A1S2YI74_CICAR (CCG-binding protein 1 OS=Cicer arietinum OX=3827 GN=LOC101514167 PE=4 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 7.837e-100
Identity = 144/202 (71.29%), Postives = 170/202 (84.16%), Query Frame = 0
Query:    1 MNSSALLHPSSPLIF-----HRNRT--------IICSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            MNS+ L   SSPL       HRNRT        I+CSSS+N S+IPKL+PF+R+K +R+AK+ PLI+KSEK+LSDYCSTL+GDE YSCWQAYFELKDLEKESP+A+IERLI+EIGGVKSLIGC+HGIALMHKLKK+   L  EI+S++E  LCPRPDGLPKSADEM EEE+A+MPDSSYT+LLR+MG+SPAWYSE PDHETD
Sbjct:    1 MNSTLLPPSSSPLFLDNHDLHRNRTYSTKLASSILCSSSKNNSFIPKLQPFTRTKFERLAKDPPLIQKSEKELSDYCSTLEGDESYSCWQAYFELKDLEKESPKAEIERLILEIGGVKSLIGCLHGIALMHKLKKNDFNLTKEIKSEEEHKLCPRPDGLPKSADEMKEEEQAKMPDSSYTRLLRTMGRSPAWYSEVPDHETD 202          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|G7JNK2|G7JNK2_MEDTR (Maternal effect embryo arrest protein, putative OS=Medicago truncatula OX=3880 GN=11443454 PE=4 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.217e-99
Identity = 152/196 (77.55%), Postives = 171/196 (87.24%), Query Frame = 0
Query:    1 MNSSA--LLHPSSPLIFHR---NRTIICSSS--RNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            MNS+   LL PS  L+ H    +  +ICSSS  RNQS+IPKL+PFSR+K+DR+AK+LPLIEKSEKDL DYCS L+GDE YSCWQAYFELKDL+KESPRA+IERLIIEIGGVKSLIGC+HGIALM KLKK+ L L  EI S++EQN CPRPDGLPKSADEMMEEE+A+MPDSSYTKLLRSMGKSPAWYSEAPDHETD
Sbjct:    1 MNSTTTTLLRPSLFLLHHNPTSSTKLICSSSSSRNQSFIPKLQPFSRTKLDRLAKDLPLIEKSEKDLLDYCSILEGDESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIGCLHGIALMRKLKKNDLNLTNEIYSEEEQNPCPRPDGLPKSADEMMEEEQAKMPDSSYTKLLRSMGKSPAWYSEAPDHETD 196          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|I3SFD6|I3SFD6_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.373e-99
Identity = 152/196 (77.55%), Postives = 171/196 (87.24%), Query Frame = 0
Query:    1 MNSS--ALLHPSSPLIFHR---NRTIICSSS--RNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            MNS+   LL PS  L+ H    +  +ICSSS  RNQS+IPKL+PFSR+K+DR+AK+LPLIEKSEKDL DYCS L+GDE YSCWQAYFELKDL+KESPRA+IERLIIEIGGVKSLIGC+HGIALM KLKK+ L L  EI S++EQN CPRPDGLPKSADEMMEEE+A+MPDSSYTKLLRSMGKSPAWYSEAPDHETD
Sbjct:    1 MNSTITTLLRPSLFLLHHNPTSSTKLICSSSSSRNQSFIPKLQPFSRTKLDRLAKDLPLIEKSEKDLLDYCSILEGDESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIGCLHGIALMRKLKKNDLNLTNEIYSEEEQNPCPRPDGLPKSADEMMEEEQAKMPDSSYTKLLRSMGKSPAWYSEAPDHETD 196          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MQ55|A0A2Z6MQ55_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_58340 PE=4 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 2.629e-97
Identity = 143/180 (79.44%), Postives = 162/180 (90.00%), Query Frame = 0
Query:   15 FHRNRTIICSSS-----RNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
             HRNRT + SS      RNQSYIPKLEPF+RSKIDR+AK+LPL+EK+EKDL DYCSTL+GDECYSCWQAY ELKDLEKESP+A+IERLII+IGGVKSLIGC+HGIALMHK+KK+GL +A EI S +EQ LCPRPDGLPKSA+E+MEEE+A+MPDSSYTKLLRSMGK P WYSEAPDHETD
Sbjct:   22 LHRNRTKLSSSIICCSSRNQSYIPKLEPFNRSKIDRLAKDLPLLEKTEKDLLDYCSTLEGDECYSCWQAYSELKDLEKESPKAEIERLIIQIGGVKSLIGCLHGIALMHKVKKNGLNVAKEIVS-EEQKLCPRPDGLPKSAEEIMEEEQAKMPDSSYTKLLRSMGKYPIWYSEAPDHETD 200          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151S4S3|A0A151S4S3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028416 PE=4 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.611e-94
Identity = 139/198 (70.20%), Postives = 162/198 (81.82%), Query Frame = 0
Query:    1 MNSSALLHPSSPLIF--HRNRT-------IICSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            M ++ L   S+PLI   H NRT        +C SSRNQ YIPKLEPFSR+K +R  K+ PLIEKSEK+LSDYCSTL+GDE YSCWQAYFELKDLEKESP+ADIERLI+E GGVKSLIGC+HGIA+MHKLKKDG+ L+ +++S++ +  CP PDGLPKS DE+MEEEKARMPDS YTKLLR+MG  PAWYS APDHETD
Sbjct:    1 MKATPLRPCSAPLILDAHSNRTSSTRHASTVCCSSRNQPYIPKLEPFSRTKFERAVKDPPLIEKSEKELSDYCSTLEGDESYSCWQAYFELKDLEKESPKADIERLILETGGVKSLIGCLHGIAIMHKLKKDGMNLSKDVKSEEGERHCPIPDGLPKSYDELMEEEKARMPDSPYTKLLRTMGSHPAWYSPAPDHETD 198          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|G7JNK1|G7JNK1_MEDTR (Maternal effect embryo arrest protein, putative OS=Medicago truncatula OX=3880 GN=11443454 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 9.794e-93
Identity = 147/196 (75.00%), Postives = 165/196 (84.18%), Query Frame = 0
Query:    1 MNSSA--LLHPSSPLIFHR---NRTIICSSS--RNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            MNS+   LL PS  L+ H    +  +ICSSS  RNQS+IPKL+PFSR+K+DR+AK+LPLIEKSEKDL        GDE YSCWQAYFELKDL+KESPRA+IERLIIEIGGVKSLIGC+HGIALM KLKK+ L L  EI S++EQN CPRPDGLPKSADEMMEEE+A+MPDSSYTKLLRSMGKSPAWYSEAPDHETD
Sbjct:    1 MNSTTTTLLRPSLFLLHHNPTSSTKLICSSSSSRNQSFIPKLQPFSRTKLDRLAKDLPLIEKSEKDLL-------GDESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIGCLHGIALMRKLKKNDLNLTNEIYSEEEQNPCPRPDGLPKSADEMMEEEQAKMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445JZH9|A0A445JZH9_GLYSO (CCG-binding protein 1 OS=Glycine soja OX=3848 GN=D0Y65_018518 PE=4 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.673e-90
Identity = 133/198 (67.17%), Postives = 162/198 (81.82%), Query Frame = 0
Query:    4 SALLHP--SSPLIF--HRNRT--------IICSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            + LL P  S+PLI   H NRT        ++C SSRNQ YIPKLEPFSR+K +R  K+ PLIEKSE+++ DYCSTL+GD+ YSCWQAYFELKDLEKESP+ADIERLI+E GGVKSLIGC+HGI++MHKLKK  + L+ +++S++ + LCP PDGLPKSADE+ EEE+ARMPDS YTKLLR+MG+ PAWYS APDHETD
Sbjct:    3 ATLLCPCSSAPLILDTHSNRTSATRHASTVVCCSSRNQPYIPKLEPFSRTKFERAVKDPPLIEKSEREILDYCSTLEGDQSYSCWQAYFELKDLEKESPKADIERLILETGGVKSLIGCLHGISIMHKLKKGDMNLSKDVKSEEGERLCPIPDGLPKSADELREEEQARMPDSPYTKLLRTMGRHPAWYSPAPDHETD 200          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|I1KLW3|I1KLW3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_07G208700 PE=4 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.673e-90
Identity = 133/198 (67.17%), Postives = 162/198 (81.82%), Query Frame = 0
Query:    4 SALLHP--SSPLIF--HRNRT--------IICSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            + LL P  S+PLI   H NRT        ++C SSRNQ YIPKLEPFSR+K +R  K+ PLIEKSE+++ DYCSTL+GD+ YSCWQAYFELKDLEKESP+ADIERLI+E GGVKSLIGC+HGI++MHKLKK  + L+ +++S++ + LCP PDGLPKSADE+ EEE+ARMPDS YTKLLR+MG+ PAWYS APDHETD
Sbjct:    3 ATLLCPCSSAPLILDTHSNRTSATRHASTVVCCSSRNQPYIPKLEPFSRTKFERAVKDPPLIEKSEREILDYCSTLEGDQSYSCWQAYFELKDLEKESPKADIERLILETGGVKSLIGCLHGISIMHKLKKGDMNLSKDVKSEEGERLCPIPDGLPKSADELREEEQARMPDSPYTKLLRTMGRHPAWYSPAPDHETD 200          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Match: tr|C6SVW7|C6SVW7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100305614 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.806e-90
Identity = 132/198 (66.67%), Postives = 161/198 (81.31%), Query Frame = 0
Query:    4 SALLHP-SSPLIF--HRNRT---------IICSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            + LL P S PLI   H NRT         ++C SS+NQ YIPKLEPFSR+K +R  K+ PLIEKSEK++ DYCSTL+GD+ YSCWQAYFELKDLEKESPRADIERLI+E GGVKSLIGC+HGI++MHK+KK  + L+ +++S++ + +CP PDGLPKSADE+ EEE+ARMPDS YTKLLR+MG+ PAWYS APDHETD
Sbjct:    3 ATLLRPCSGPLILDTHSNRTSSTMRHASTVVCCSSKNQPYIPKLEPFSRTKFERAVKDPPLIEKSEKEILDYCSTLEGDQSYSCWQAYFELKDLEKESPRADIERLILETGGVKSLIGCLHGISIMHKVKKGDMNLSKDVKSEEGERMCPIPDGLPKSADELREEEQARMPDSPYTKLLRTMGRHPAWYSPAPDHETD 200          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XIM0|MEE14_ARATH (CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 5.213e-63
Identity = 103/184 (55.98%), Postives = 137/184 (74.46%), Query Frame = 0
Query:   10 SSPLIFHRNRTII-CSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHK--LKKDGLKLAMEIESKDEQNLCPR-PDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            S P    R+  ++ CSS+R+   +PKLE FSR K DR+ ++ PLIEK+E +LSDYCSTL+GD+ YSCW+AYFELKDLE+E P+ ++E LI++ GG+KSLIGC+HG+A M K    K+GL +  E + +   NL    PDGLPKS  E+ EEEK++MPDS++T+LLRS G  PAW+S APDHETD
Sbjct:   23 SRPCFLARSFPVVRCSSTRD---VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTGGLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMNLHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. Araport11
Match: AT2G15890.1 (| maternal effect embryo arrest 14 | Chr2:6921196-6921978 REVERSE LENGTH=203 | 201606)

HSP 1 Score: 196.438 bits (498), Expect = 5.334e-64
Identity = 103/184 (55.98%), Postives = 137/184 (74.46%), Query Frame = 0
Query:   10 SSPLIFHRNRTII-CSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHK--LKKDGLKLAMEIESKDEQNLCPR-PDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            S P    R+  ++ CSS+R+   +PKLE FSR K DR+ ++ PLIEK+E +LSDYCSTL+GD+ YSCW+AYFELKDLE+E P+ ++E LI++ GG+KSLIGC+HG+A M K    K+GL +  E + +   NL    PDGLPKS  E+ EEEK++MPDS++T+LLRS G  PAW+S APDHETD
Sbjct:   23 SRPCFLARSFPVVRCSSTRD---VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTGGLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMNLHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203          
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. Araport11
Match: AT2G15890.2 (| maternal effect embryo arrest 14 | Chr2:6921196-6921978 REVERSE LENGTH=175 | 201606)

HSP 1 Score: 159.073 bits (401), Expect = 1.214e-49
Identity = 88/181 (48.62%), Postives = 119/181 (65.75%), Query Frame = 0
Query:   10 SSPLIFHRNRTII-CSSSRNQSYIPKLEPFSRSKIDRVAKNLPLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIEIGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSADEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD 189
            S P    R+  ++ CSS+R+   +PKLE FSR K DR+ ++ PLIEK+E +LSDYCSTL+GD+ YSCW+AYFELKDLE+E P+ ++E LI++ G                  ++ G+ L + I           PDGLPKS  E+ EEEK++MPDS++T+LLRS G  PAW+S APDHETD
Sbjct:   23 SRPCFLARSFPVVRCSSTRD---VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTGEESD--------------REKGMNLHIHI-----------PDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 175          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3MS01|A0A2K3MS01_TRIPR6.775e-10075.00Maternal effect embryo arrest 14 protein OS=Trifol... [more]
tr|A0A1S2YI74|A0A1S2YI74_CICAR7.837e-10071.29CCG-binding protein 1 OS=Cicer arietinum OX=3827 G... [more]
tr|G7JNK2|G7JNK2_MEDTR1.217e-9977.55Maternal effect embryo arrest protein, putative OS... [more]
tr|I3SFD6|I3SFD6_MEDTR1.373e-9977.55Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A2Z6MQ55|A0A2Z6MQ55_TRISU2.629e-9779.44Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|A0A151S4S3|A0A151S4S3_CAJCA1.611e-9470.20Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|G7JNK1|G7JNK1_MEDTR9.794e-9375.00Maternal effect embryo arrest protein, putative OS... [more]
tr|A0A445JZH9|A0A445JZH9_GLYSO1.673e-9067.17CCG-binding protein 1 OS=Glycine soja OX=3848 GN=D... [more]
tr|I1KLW3|I1KLW3_SOYBN1.673e-9067.17Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|C6SVW7|C6SVW7_SOYBN1.806e-9066.67Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q9XIM0|MEE14_ARATH5.213e-6355.98CCG-binding protein 1 OS=Arabidopsis thaliana OX=3... [more]
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BLAST of Vfaba.Hedin2.R1.6g119480.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G15890.15.334e-6455.98| maternal effect embryo arrest 14 | Chr2:6921196-... [more]
AT2G15890.21.214e-4948.62| maternal effect embryo arrest 14 | Chr2:6921196-... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..164
IPR037502CCG-binding protein 1PANTHERPTHR36345CCG-BINDING PROTEIN 1coord: 18..189

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.6g119480.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g119480.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g119480.1; organism=Vicia faba; type=mRNA; length=570bp
ATGAATTCATCGGCACTACTTCATCCTTCTTCTCCTTTGATTTTTCATCG
CAACCGAACCATTATTTGTTCTTCATCTAGAAACCAATCTTACATCCCTA
AACTGGAACCATTTAGCCGATCCAAAATCGACAGAGTCGCAAAAAACCTT
CCTCTGATTGAAAAATCCGAGAAAGATCTCTCTGATTATTGTTCTACACT
TGATGGTGATGAATGTTATAGTTGCTGGCAGGCTTATTTCGAGCTCAAAG
ATCTTGAAAAGGAGTCACCGAGAGCGGATATAGAGAGGTTAATTATTGAG
ATTGGTGGTGTGAAATCGTTGATAGGATGTATACATGGAATTGCGCTAAT
GCATAAATTGAAGAAGGATGGATTAAAATTGGCGATGGAAATAGAATCAA
AAGATGAACAAAATCTTTGTCCTAGACCAGATGGATTACCAAAATCTGCT
GATGAAATGATGGAAGAAGAGAAAGCAAGAATGCCTGATTCGTCGTATAC
TAAGCTTCTTAGATCCATGGGAAAGTCACCTGCATGGTATTCTGAAGCAC
CGGATCATGAAACAGATTGA
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protein sequence of Vfaba.Hedin2.R1.6g119480.1_vfh_v1

>Vfaba.Hedin2.R1.6g119480.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g119480.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g119480.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=189bp
MNSSALLHPSSPLIFHRNRTIICSSSRNQSYIPKLEPFSRSKIDRVAKNL
PLIEKSEKDLSDYCSTLDGDECYSCWQAYFELKDLEKESPRADIERLIIE
IGGVKSLIGCIHGIALMHKLKKDGLKLAMEIESKDEQNLCPRPDGLPKSA
DEMMEEEKARMPDSSYTKLLRSMGKSPAWYSEAPDHETD
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mRNA from alignment at chr6:979539119..979539857+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.6g119480.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g119480.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g119480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr6:979539119..979539857+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR037502CBP1
Vocabulary: Biological Process
TermDefinition
GO:0010183pollen tube guidance
Vocabulary: Molecular Function
TermDefinition
GO:0036033mediator complex binding