Vfaba.Hedin2.R1.6g120280.1

Transcript Overview
NameVfaba.Hedin2.R1.6g120280.1
Unique NameVfaba.Hedin2.R1.6g120280.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length366
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:986984448..986984813 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR520Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR528Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR554Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL247Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL746Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL453Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL540Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL671Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL705Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0037Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL1131Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL104Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL308Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvfhL672Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL408Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL416Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvfhL179Pisum sativum Cameor genome v1aPisum sativum
psvfhL729Pisum sativum Cameor genome v1aPisum sativum
psvfhL732Pisum sativum Cameor genome v1aPisum sativum
vfhvfhL051Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvfhL159Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvfhL207Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL057Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL326Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL418Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR651Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR657Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR664Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL704Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL716Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0498Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0544Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0551Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivfhL980Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL1018Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR636Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR695Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR704Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR708Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR604Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR610Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR715Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR739Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR757Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR761Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL486Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL609Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL644Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL324Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL326Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL338Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL775Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL474Cicer arietinum
carvfhL600Cicer arietinum
carvfhL650Cicer arietinum
ccavfhL056Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL190Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL573Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL655Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR725Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR738Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR756Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR645Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR653Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR673Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR712Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL090Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL092Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL099Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL107Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL162Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR715Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR718Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR725Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR730Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR743Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvunR604Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR609Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR615Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun03g184300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_019147Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr03.3577Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg54881.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
XM_058925224.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_16777.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigst.01G194100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_020559Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014652638.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg29285.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun03g184300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058874769.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va01G063150.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_00932.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_02764.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cc_v2.0_15277.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_23109Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.003G294100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigan.01G278300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004505128.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan09g075200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_15221.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_06424Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat7g121600.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_27920Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_01G02068.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_01520Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.6g095640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.2g163560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g120280Vfaba.Hedin2.R1.6g120280_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g120280.1_vfh_v1-exonVfaba.Hedin2.R1.6g120280.1_vfh_v1-exon-chr6_vfh_v1:986984448..986984813Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g120280.1_vfh_v1-cdsVfaba.Hedin2.R1.6g120280.1_vfh_v1-cds-chr6_vfh_v1:986984448..986984813Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.6g120280.1_vfh_v1Vfaba.Hedin2.R1.6g120280.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.6g120280.1_vfh_v1Vfaba.Hedin2.R1.6g120280.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NJG4|A0A2Z6NJG4_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_58100 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.033e-54
Identity = 98/134 (73.13%), Postives = 111/134 (82.84%), Query Frame = 0
Query:    1 MSTPILLQ---PPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRV---APPPPPPVNEPDA-------IQDSQEIKEDQHSQQESRQSSLGHNSS 121
            MSTP++ Q   PPP+EVTQQAYTTHSGHGS+GPVIAVLAVITVLGIIAGMIGRLCSG RVMGYGEYDIESW++TKCSSCVG R+    PPPPPP NE DA       + DSQEIKED+ S+Q+SRQ+SL  +SS
Sbjct:    1 MSTPMVQQQQLPPPIEVTQQAYTTHSGHGSVGPVIAVLAVITVLGIIAGMIGRLCSGRRVMGYGEYDIESWVETKCSSCVGGRIVPPVPPPPPPANEADAVDDSPPVVDDSQEIKEDEQSRQQSRQNSLDRSSS 134          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6L3S4|A0A4D6L3S4_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g3504 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 9.609e-43
Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVA-------PPPPPPVNEPDAIQDSQEIKEDQHSQQE 110
            MSTP + QPP +E+TQQAYTTHS HG++GPVIAVLAVITVLG+IAGMIGRLCSG RVMG+GEYD+E+WI+TKCSSCV  R+A        PP P + +   +Q  QEIK +QH +Q 
Sbjct:    1 MSTPFVQQPPSIEITQQAYTTHSDHGTVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGEYDVETWIETKCSSCVDGRIAPPPPPPPLPPEPAIQDLQPVQAPQEIKVEQHPRQN 117          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LNG6|A0A445LNG6_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_003831 PE=4 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.831e-42
Identity = 66/82 (80.49%), Postives = 77/82 (93.90%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVA 82
            MSTP + QPPP+EVTQQAYTTHSGHGS+GPVIAVLAVITVLG+IAGMIGRLCSG RVMG+GE+D+E+W++TKCSSCV  R+A
Sbjct:    1 MSTPFVQQPPPIEVTQQAYTTHSGHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGEFDVETWVETKCSSCVDGRIA 82          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|I1JEX1|I1JEX1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100804641 PE=4 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.831e-42
Identity = 66/82 (80.49%), Postives = 77/82 (93.90%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVA 82
            MSTP + QPPP+EVTQQAYTTHSGHGS+GPVIAVLAVITVLG+IAGMIGRLCSG RVMG+GE+D+E+W++TKCSSCV  R+A
Sbjct:    1 MSTPFVQQPPPIEVTQQAYTTHSGHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGEFDVETWVETKCSSCVDGRIA 82          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|V7CGP5|V7CGP5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G294100g PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.719e-42
Identity = 76/116 (65.52%), Postives = 93/116 (80.17%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVA-------PPPPPPVNEPDAIQDSQEIKEDQHSQQ 109
            MSTP + QPP +E++QQAY THS HGS+GPVIAVLAVITVLG+IAGMIGRLCSG RVMG+GEYD+E+WI+TKCSSCV  R+A        PP PP+++   +Q  QEIKE+QH +Q
Sbjct:    1 MSTPFVQQPPSIEISQQAYRTHSDHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGEYDVETWIETKCSSCVDGRIAPPPPPPSLPPQPPIHDLPPVQAPQEIKEEQHPRQ 116          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R3H4|A0A0S3R3H4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G278300 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.968e-42
Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVAPPPPPP-------VNEPDAIQDSQEIKEDQHSQQE 110
            MSTP + QPP +E+TQQAYTTH  HGS+GPVIAVLAVITVLG+IAGMIGRLCSG R+MG+GE+D+E+WI+TKCSSCV  R+APPP PP       + +  ++Q  QEIK +QH +Q 
Sbjct:    1 MSTPFVQQPPSIEITQQAYTTHLDHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRIMGHGEFDVETWIETKCSSCVDGRIAPPPLPPPLPPEPVIQDLSSVQAPQEIKVEQHPRQN 117          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VAR5|A0A0L9VAR5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g075200 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.968e-42
Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVAPPPPPP-------VNEPDAIQDSQEIKEDQHSQQE 110
            MSTP + QPP +E+TQQAYTTH  HGS+GPVIAVLAVITVLG+IAGMIGRLCSG R+MG+GE+D+E+WI+TKCSSCV  R+APPP PP       + +  ++Q  QEIK +QH +Q 
Sbjct:    1 MSTPFVQQPPSIEITQQAYTTHLDHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRIMGHGEFDVETWIETKCSSCVDGRIAPPPLPPPLPPEPVIQDLSSVQAPQEIKVEQHPRQN 117          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UQB3|A0A1S3UQB3_VIGRR (uncharacterized protein LOC106767697 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767697 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.445e-42
Identity = 74/117 (63.25%), Postives = 93/117 (79.49%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVAPPPPPP-------VNEPDAIQDSQEIKEDQHSQQE 110
            M+TP + QPP +E+TQQAYTTH  HGS+GPVIAVLAVITVLG+IAGMIGRLCSG R+MG+GE+D+E+WI+TKCSSCV  R+APPP PP       + +  ++Q  QEIK +QH +Q 
Sbjct:    1 MATPFVQQPPSIEITQQAYTTHLDHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRIMGHGEFDVETWIETKCSSCVDGRIAPPPLPPPLPPEPVIQDLSSVQAPQEIKVEQHPRQN 117          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|G7JMH7|G7JMH7_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11446341 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.363e-42
Identity = 77/98 (78.57%), Postives = 85/98 (86.73%), Query Frame = 0
Query:    9 PPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVA--PPPPPPVNEPDAIQDSQEIKED 104
            PPP+EVTQQAYTT SGHGS+GPVIAVLAVITVLGIIAGMIGRLCSG RVMGYGEYDIESW++TKCSSCVG R+   PPP PPVNEP+A  ++    ED
Sbjct:   10 PPPIEVTQQAYTTQSGHGSVGPVIAVLAVITVLGIIAGMIGRLCSGRRVMGYGEYDIESWVETKCSSCVGGRIVPPPPPRPPVNEPEAAAENSPAVED 107          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Match: tr|I1KLX3|I1KLX3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100797311 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.348e-41
Identity = 66/82 (80.49%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    1 MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRVA 82
            MSTP + QPPPLEVTQQ+YTTH GHGS+GPVIAVLAVITVLG+IAGMIGRLCSG RVMG+GEYD+E+W++TKCSSCV  R+A
Sbjct:    1 MSTPFVQQPPPLEVTQQSYTTHLGHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMGHGEYDVETWVETKCSSCVDGRIA 82          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. Araport11
Match: AT2G26520.1 (| transmembrane protein | Chr2:11280280-11280717 FORWARD LENGTH=145 | 201606)

HSP 1 Score: 79.7221 bits (195), Expect = 6.222e-20
Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    2 STPILLQPPPL--EVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGSRV 81
            S P+  QPPP        +  + +G+ ++GP IAV  V+TVL ++A +IGRLCSG  ++GYG+YD+E W +++C SC+   +
Sbjct:    3 SMPLYWQPPPATEVSQDSSSVSSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILGYGDYDMERWAESRCGSCIDGHI 84          
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. Araport11
Match: AT3G57500.1 (| fission regulator-like protein | Chr3:21281980-21282351 FORWARD LENGTH=123 | 201606)

HSP 1 Score: 65.4698 bits (158), Expect = 1.246e-14
Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    3 TPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGRLCSGGRVMGYGEYDIESWIQTKCSSCVGS 79
            T I + PP    +Q   + +S H S+  ++ VLAVIT+L ++AG+  RLC G  +   G++DIE W++ KC SC+ +
Sbjct:   17 TTIYIDPP----SQDQPSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRHLSHGGDHDIEGWVERKCRSCIDA 89          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2Z6NJG4|A0A2Z6NJG4_TRISU4.033e-5473.13Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|A0A4D6L3S4|A0A4D6L3S4_VIGUN9.609e-4364.10Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A445LNG6|A0A445LNG6_GLYSO1.831e-4280.49Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1JEX1|I1JEX1_SOYBN1.831e-4280.49Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|V7CGP5|V7CGP5_PHAVU2.719e-4265.52Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A0S3R3H4|A0A0S3R3H4_PHAAN2.968e-4264.10Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9VAR5|A0A0L9VAR5_PHAAN2.968e-4264.10Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A1S3UQB3|A0A1S3UQB3_VIGRR7.445e-4263.25uncharacterized protein LOC106767697 OS=Vigna radi... [more]
tr|G7JMH7|G7JMH7_MEDTR8.363e-4278.57Transmembrane protein, putative OS=Medicago trunca... [more]
tr|I1KLX3|I1KLX3_SOYBN1.348e-4180.49Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
back to top
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Vfaba.Hedin2.R1.6g120280.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G26520.16.222e-2041.46| transmembrane protein | Chr2:11280280-11280717 F... [more]
AT3G57500.11.246e-1438.96| fission regulator-like protein | Chr3:21281980-2... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..121
NoneNo IPR availablePANTHERPTHR33429OS02G0708000 PROTEIN-RELATEDcoord: 7..110

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.6g120280.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g120280.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g120280.1; organism=Vicia faba; type=mRNA; length=366bp
ATGTCGACACCAATTCTCCTACAGCCACCACCCTTAGAGGTAACCCAACA
AGCATACACAACCCATTCAGGTCACGGGTCGATGGGACCCGTCATTGCGG
TTCTGGCAGTCATCACTGTTCTGGGTATCATTGCTGGTATGATTGGTAGG
CTTTGTTCGGGTGGTCGCGTCATGGGGTATGGCGAATACGACATTGAATC
ATGGATTCAAACCAAATGTTCTTCTTGTGTAGGCAGCAGAGTAGCCCCTC
CTCCACCACCGCCGGTGAATGAACCCGACGCTATTCAGGATTCTCAAGAG
ATAAAAGAAGATCAACACTCACAACAAGAATCCAGGCAAAGCTCACTTGG
TCATAATAGTAGTTAA
back to top

protein sequence of Vfaba.Hedin2.R1.6g120280.1_vfh_v1

>Vfaba.Hedin2.R1.6g120280.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g120280.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g120280.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=121bp
MSTPILLQPPPLEVTQQAYTTHSGHGSMGPVIAVLAVITVLGIIAGMIGR
LCSGGRVMGYGEYDIESWIQTKCSSCVGSRVAPPPPPPVNEPDAIQDSQE
IKEDQHSQQESRQSSLGHNSS
back to top

mRNA from alignment at chr6:986984448..986984813+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.6g120280.1_vfh_v1 ID=Vfaba.Hedin2.R1.6g120280.1_vfh_v1; Name=Vfaba.Hedin2.R1.6g120280.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr6:986984448..986984813+ (Vicia faba
back to top