Vfaba.Tiffany.R1.1g035200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|G7IRL7|G7IRL7_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11422127 PE=4 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.857e-76 Identity = 147/209 (70.33%), Postives = 160/209 (76.56%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPV-DFDTMLDESEDVNITYPSTNRRKHETQNPASSL----------IQNQVVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTSSSSFKTNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNWL 198 MKSVSKNKFLTCFRPV D D ML ESE V PST+RRKH TQN A++ IQNQV HPPKQTL+KVIKAV+FQ ILNTRA+KK YSQ CFGSKRNYSLHTR SSSSFKTNIEEIK IES LSS SSS SPV SKSLSKSNE Q E +++F CLGIYM+ LISLVVT+ GK NVI+LT MFFCCF L NT S+ L Sbjct: 1 MKSVSKNKFLTCFRPVIDLDDML-ESETV--PAPSTSRRKHATQNSATNSMSLDQNSPKSIQNQVAGHPPKQTLSKVIKAVMFQIILNTRANKKNLYSQTCFGSKRNYSLHTR-SSSSFKTNIEEIKAIESPLSSPSSSY-SPVFNSKSLSKSNESQFENQKKFHCLGIYMVFLISLVVTVCWGKVNVIVLTSMFFCCFCLCNTCSHQL 204
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XFU0|A0A1S2XFU0_CICAR (uncharacterized protein LOC101514297 OS=Cicer arietinum OX=3827 GN=LOC101514297 PE=4 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.176e-43 Identity = 107/202 (52.97%), Postives = 129/202 (63.86%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPV-DFDTMLDESEDVNITYPSTNRRKHETQNPASSLIQNQVVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTS-SSSFK-TNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNEC-QLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNWL 198 MK+VSKNKFLTCFRPV DF+ +E K QN + S + N+V PPKQTLAK NTRAHKK RY QNCFGSKR+Y +HT++S SS+F TNIEEIK IESS S SSSS + QLEK+++F+C+G+YM++LI LVVT+F GK NVIILT M FCCFSL N SS+ L Sbjct: 1 MKNVSKNKFLTCFRPVFDFEAQNSATES-----------KFSEQNCSKSKL-NEVACQPPKQTLAK-----------NTRAHKKNRY-QNCFGSKRSYFIHTKSSCSSTFNSTNIEEIKAIESSWSCSSSSSSPISESKSLSLSKSSEGQLEKEKKFKCIGLYMVVLICLVVTVFWGKINVIILTSMSFCCFSLCNASSHLL 178
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|V7BVD3|V7BVD3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G110200g PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.697e-42 Identity = 100/218 (45.87%), Postives = 133/218 (61.01%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPVD-FDTMLDESEDVNITYPSTNRR--------KHETQNPAS-------SLIQNQVVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTSSSSFKTNIEEIKGIESSLSSSSSSPC-----SPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNW 197 MK+ SK KFLTCFRPVD D ML V+ S++RR KH+T+N A+ L QN VV HPPK + +KVIKA++ +T+LNTRA KK SQ CFGSKR Y +T +SS+ + + I+ + SP SPVSESK +S+ ++ Q +K+++FQC+GIY + +SLVVT+F GK NVII T + C FSLWN S W Sbjct: 1 MKNASKKKFLTCFRPVDDTDPMLQPRAVVDR---SSSRRLACTPVADKHDTRNSATKSTFSEQELPQNLVVPHPPKPSFSKVIKAMLIETVLNTRARKKNLNSQTCFGSKRGYWPYTESSSTGDEKQVFVDSKIQKIIKPPEWSPTISSSNSPVSESKKISEFDKEQEQKQKKFQCVGIY-WVFVSLVVTVFWGKINVIIWTSLLLCFFSLWNASCCW 214
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SHB4|A0A0S3SHB4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G090600 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.152e-40 Identity = 97/218 (44.50%), Postives = 134/218 (61.47%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPV-DFDTMLDESEDVNITYPSTNRR--------KHETQNPAS------SLIQNQVVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTSSSS------FKTNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNW 197 M++VSK KFLTCFRP D D ML V+ S++RR +H+ + A+ + +VV HPPK T +KVIKAV+ +T LNT+AHKK SQ+CFGSKR +S++T +SS+ + IE+IK E S + SSS+ S++ S +S + Q+E +++FQC+GIY + +SLVVTIF GK NVII T + C FSLWN S W Sbjct: 1 MRNVSKKKFLTCFRPGHDTDAMLQPRAVVD---RSSSRRFACIPVADEHDAGSSATKSTFSEQELPQKVVPHPPKPTFSKVIKAVLIETALNTKAHKKNLDSQSCFGSKRGFSVYTESSSTGDVKQVFVDSKIEKIKPCEWSSTISSSNSAVSESKNISEIESTKEQVENEKKFQCVGIY-WVFVSLVVTIFWGKVNVIIWTSLLLCFFSLWNASCCW 214
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UN18|A0A0L9UN18_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g155200 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.152e-40 Identity = 97/218 (44.50%), Postives = 134/218 (61.47%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPV-DFDTMLDESEDVNITYPSTNRR--------KHETQNPAS------SLIQNQVVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTSSSS------FKTNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNW 197 M++VSK KFLTCFRP D D ML V+ S++RR +H+ + A+ + +VV HPPK T +KVIKAV+ +T LNT+AHKK SQ+CFGSKR +S++T +SS+ + IE+IK E S + SSS+ S++ S +S + Q+E +++FQC+GIY + +SLVVTIF GK NVII T + C FSLWN S W Sbjct: 1 MRNVSKKKFLTCFRPGHDTDAMLQPRAVVD---RSSSRRFACIPVADEHDAGSSATKSTFSEQELPQKVVPHPPKPTFSKVIKAVLIETALNTKAHKKNLDSQSCFGSKRGFSVYTESSSTGDVKQVFVDSKIEKIKPCEWSSTISSSNSAVSESKNISEIESTKEQVENEKKFQCVGIY-WVFVSLVVTIFWGKVNVIIWTSLLLCFFSLWNASCCW 214
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F064|A0A3Q0F064_VIGRR (uncharacterized protein LOC111241601 OS=Vigna radiata var. radiata OX=3916 GN=LOC111241601 PE=4 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.510e-35 Identity = 92/218 (42.20%), Postives = 131/218 (60.09%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPV-DFDTMLDESEDVNITYPSTNRR-----KHETQNPASSL---------IQNQVVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTSSSS------FKTNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNW 197 M++VSK KFLTCFRPV D D ML V+ S++RR + N SS + +VV HPPK T +K IKA++ +T+LNT+A KK SQ CFGSKR +S++T +SS+ + IE+IK E S + SSS+ S++ S +S+ ++E +++F+C+GI+ + +SLVVT+F GK NVII T + C FSLWN S W Sbjct: 1 MRNVSKKKFLTCFRPVHDTDAMLQPRAVVD---RSSSRRFACIPVADEHNAGSSATKSTFSEQELPQKVVPHPPKPTFSKEIKAMLIETVLNTKARKKNLDSQTCFGSKRGFSVYTESSSTGDVKQVFVDSKIEKIKPSEWSSTISSSNSAVSESKNISEIESSNEKVENEKKFECVGIF-WVFVSLVVTVFWGKVNVIIWTSLLLCFFSLWNASCCW 214
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IC28|A0A445IC28_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_032234 PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.312e-33 Identity = 94/220 (42.73%), Postives = 125/220 (56.82%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPV-DFDTMLDESEDVNITYPSTN------RRKHETQNPASS--------LIQNQ-VVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTSSSS-------FKTNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNW 197 M++VSKN+FLTCFRPV D D ML+ V S KH+ +N + L QN VV P K+T +K+IKA +F +LNTRA K Q CFGSKR+YS +T +SS+ TNI++IK E S S SSS+ +ES + Q+EK+++F+CLGIY +L+SLVVT+F GK NV I T + C FS+WN W Sbjct: 1 MRNVSKNRFLTCFRPVVDIDDMLEPKAAVVDDSASCRFACIPVADKHDAKNSTTKATLSDQDMLAQNWIVVPRPQKRTFSKIIKADLF--LLNTRARNKNLDGQGCFGSKRDYSAYTESSSTGDEKKQAFVGTNIQKIKPPEWSSSISSSNSPESKNESP------KDQVEKQKKFRCLGIYW-VLVSLVVTVFWGKVNVTIWTSLLLCFFSIWNGICCW 211
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|K7M2T4|K7M2T4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=106795662 PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.312e-33 Identity = 94/220 (42.73%), Postives = 125/220 (56.82%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPV-DFDTMLDESEDVNITYPSTN------RRKHETQNPASS--------LIQNQ-VVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRYSQNCFGSKRNYSLHTRTSSSS-------FKTNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNW 197 M++VSKN+FLTCFRPV D D ML+ V S KH+ +N + L QN VV P K+T +K+IKA +F +LNTRA K Q CFGSKR+YS +T +SS+ TNI++IK E S S SSS+ +ES + Q+EK+++F+CLGIY +L+SLVVT+F GK NV I T + C FS+WN W Sbjct: 1 MRNVSKNRFLTCFRPVVDIDDMLEPKAAVVDDSASCRFACIPVADKHDAKNSTTKATLSDQDMLAQNWIVVPRPQKRTFSKIIKADLF--LLNTRARNKNLDGQGCFGSKRDYSAYTESSSTGDEKKQAFVGTNIQKIKPPEWSSSISSSNSPESKNESP------KDQVEKQKKFRCLGIYW-VLVSLVVTVFWGKVNVTIWTSLLLCFFSIWNGICCW 211
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SVD3|A0A151SVD3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_014186 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.394e-32 Identity = 95/218 (43.58%), Postives = 129/218 (59.17%), Query Frame = 0 Query: 1 MKSVSKN-KFLTCFRPV-DFDTMLDESEDVNITYPSTNR-------RKHETQN------------PASSLIQNQVVDHPPKQTLAKVIKAVVFQTILNTRAHKKKRY--SQNCFGSKRNYSLHTRTSSSSFK-TNIEEIKGIE-SSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNT 193 M + SKN +FLTCFRPV D D+ML+ + T S+ R KH+T+N P SS++ ++ HPPK+T +KVIKAVVFQT+LNTR K + +QNC GSK YS T +F TN++EIK E S SSS++ S++KS S+S + Q+ K+++F C GIY IL+SL +T F GK NVIILT + C +WN Sbjct: 1 MPNASKNNRFLTCFRPVVDIDSMLESRAVADRT--SSQRFTCIPVSYKHDTKNSPTKPTFSDQDMPQSSVV---LLPHPPKRTFSKVIKAVVFQTVLNTRVRNKNLHGQTQNCIGSKSGYS--TCDEKKAFVVTNVQEIKAPEWSPTVSSSNNSSVSESKNKSKSESTKEQVLKQKKFHCGGIYW-ILVSLAITAFWGKINVIILTSLLLCFLWVWNA 210
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N9M0|A0A4D6N9M0_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g823 PE=4 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 8.173e-32 Identity = 90/220 (40.91%), Postives = 130/220 (59.09%), Query Frame = 0 Query: 1 MKSVSKNKFLTCFRPVD-FDTMLDESEDVNITYPSTNRR--------KHETQNPASSL------IQNQVVDHPPKQTLAKVIKAVVFQTIL--NTRAHKKKRYSQNCFGSKRNYSLHTRTSSSS------FKTNIEEIKGIESSLSSSSSSPCSPVSESKSLSKSNECQLEKKQRFQCLGIYMMILISLVVTIFCGKFNVIILTLMFFCCFSLWNTSSNW 197 M++VSK +FLTCFRPVD D L V+ S++RR +H T A+ + +VV HPPK T +KVIKA++ +T+L NT++ KK SQ CFGSKR +S++T +SS+ + I + K E S + SSS+ S++ S +S + ++K+++FQC+GIY + +SLVVT+F GK NVII T + C FSLWN S W Sbjct: 1 MRNVSKKRFLTCFRPVDDTDATLQPRAVVD---RSSSRRFACIPVADEHFTGISAAKSTFSEQDLPREVVPHPPKPTFSKVIKAMLIETVLISNTKSRKKNLDSQTCFGSKRGFSVYTESSSTGDVKHVFVDSKIPKTKPSEWSSTISSSNSPVSESKNMSEIESAKELVQKQKKFQCVGIYW-VFVSLVVTVFWGKVNVIIWTSLLLCFFSLWNASCCW 216 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.1g035200.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 0
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.1g035200.1_tif_v1 ID=Vfaba.Tiffany.R1.1g035200.1_tif_v1; Name=Vfaba.Tiffany.R1.1g035200.1; organism=Vicia faba; type=mRNA; length=657bpback to top protein sequence of Vfaba.Tiffany.R1.1g035200.1_tif_v1 >Vfaba.Tiffany.R1.1g035200.1_tif_v1 ID=Vfaba.Tiffany.R1.1g035200.1_tif_v1; Name=Vfaba.Tiffany.R1.1g035200.1_tif_v1; organism=Vicia faba; type=polypeptide; length=218bpback to top mRNA from alignment at chr1S:301678592..301679339- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.1g035200.1_tif_v1 ID=Vfaba.Tiffany.R1.1g035200.1_tif_v1; Name=Vfaba.Tiffany.R1.1g035200.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:301678592..301679339- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
|