Vfaba.Tiffany.R1.1g069040.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PEW3|A0A2K3PEW3_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g010497 PE=4 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 9.461e-63 Identity = 95/114 (83.33%), Postives = 102/114 (89.47%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVHILK G SKRVKSK IYK YMP RSGSN+VG+KSLLYYYDETC PYIWIHD+GG SLRMVKQQY+SLEDL+ EI+ILRDQHKGCISVCKR RPD C Sbjct: 46 RPVELQIRVGSILKKVHILKPGSSKRVKSKRIYKTYMPSRSGSNNVGMKSLLYYYDETCHPYIWIHDIGGDSLRMVKQQYISLEDLKVSSEIKILRDQHKGCISVCKRIRPDFC 159
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XA99|A0A1S2XA99_CICAR (uncharacterized protein LOC101498772 OS=Cicer arietinum OX=3827 GN=LOC101498772 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.152e-62 Identity = 96/114 (84.21%), Postives = 102/114 (89.47%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK G SKRVKSK IYKAYMP RSGS VGLKSLLYYYDETC PYIWIHD+GG SLRMVKQQY+SLEDLRE EIRILRDQ++GCISVCKRTRP+ C Sbjct: 47 RPVELQIRVGSILKKVHTLKPGTSKRVKSKSIYKAYMPCRSGSKSVGLKSLLYYYDETCHPYIWIHDIGGDSLRMVKQQYISLEDLRESSEIRILRDQNRGCISVCKRTRPEFC 160
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V522|A0A072V522_MEDTR (RING zinc finger protein, putative OS=Medicago truncatula OX=3880 GN=25486083 PE=4 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.082e-62 Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVHILK G SKRVKSK IYK YMP RSGS++VG+KSLLYYYDETC PYIWIHD+ G SLRMVKQQY+SLEDL+ EIRILRD H+GCISVCKRTRPDLC Sbjct: 47 RPVELQIRVGSILKKVHILKPGSSKRVKSKRIYKTYMPSRSGSDNVGMKSLLYYYDETCHPYIWIHDIEGDSLRMVKQQYISLEDLKMSSEIRILRDHHRGCISVCKRTRPDLC 160
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445I7V0|A0A445I7V0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_031325 PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.106e-58 Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK G KR++SK IYKAYMPG+SG++ GLKSLLYYYDETC PY+WIHD+GGGS+RMVKQQY+SLE+LR+ EIRILRDQ +GCISV KRTRPD C Sbjct: 46 RPVELQIRVGSILKKVHTLKPGSCKRLRSKRIYKAYMPGKSGNDGGGLKSLLYYYDETCHPYVWIHDIGGGSMRMVKQQYISLENLRDSSEIRILRDQQRGCISVLKRTRPDFC 159
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|I1M149|I1M149_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=106795504 PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.106e-58 Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK G KR++SK IYKAYMPG+SG++ GLKSLLYYYDETC PY+WIHD+GGGS+RMVKQQY+SLE+LR+ EIRILRDQ +GCISV KRTRPD C Sbjct: 46 RPVELQIRVGSILKKVHTLKPGSCKRLRSKRIYKAYMPGKSGNDGGGLKSLLYYYDETCHPYVWIHDIGGGSMRMVKQQYISLENLRDSSEIRILRDQQRGCISVLKRTRPDFC 159
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7G5T2|A0A1J7G5T2_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_06843 PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.980e-58 Identity = 92/115 (80.00%), Postives = 100/115 (86.96%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDV-GLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK GCSKRVKSK IYK YMP +SGS+ GLKSLLYYYDETC PYIWI D+GGGSLRM+KQQY+SLEDL++ EIRILRD KGCISVCKRTRPD C Sbjct: 48 RPVELQIRVGSILKKVHTLKPGCSKRVKSKCIYKTYMPEKSGSSGAKGLKSLLYYYDETCHPYIWIQDIGGGSLRMMKQQYISLEDLKDSSEIRILRDYQKGCISVCKRTRPDFC 162
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|C6TMU5|C6TMU5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.194e-58 Identity = 88/114 (77.19%), Postives = 101/114 (88.60%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK G KR++SK IYKAYMPG+SG++ GLKSLLYYYDETC PY+WIHD+GGGS+RMVKQQY+SLE+LR+ EIRILRDQ +GCISV KRTRPD C Sbjct: 46 RPVELQIRVGSILKKVHTLKPGSCKRLRSKRIYKAYMPGKSGNDGGGLKSLLYYYDETCHPYVWIHDIGGGSMRMVKQQYISLENLRDFSEIRILRDQQRGCISVLKRTRPDFC 159
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151U0I2|A0A151U0I2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005436 PE=4 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.065e-57 Identity = 88/114 (77.19%), Postives = 99/114 (86.84%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK G KR+KSKGIYKAYMPG+ ++ GLKSLLYYYDETC PY+WIHD+GGGSLRMVKQQY+SLEDLR+ EI+ILRD +GCISV KRTRPD C Sbjct: 44 RPVELQIRVGSILKKVHTLKPGSCKRLKSKGIYKAYMPGKRDNDGGGLKSLLYYYDETCHPYVWIHDIGGGSLRMVKQQYISLEDLRDSSEIKILRDHQRGCISVLKRTRPDFC 157
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GS25|A0A445GS25_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040514 PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.866e-57 Identity = 87/114 (76.32%), Postives = 100/114 (87.72%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK G KR++SK IYKAYMPG++G++ VGLKSLLYYYDETC PY+WIHD+GG S+RMVKQQY+SLEDLR+ EIRI RDQ +GCISV KRTR DLC Sbjct: 47 RPVELQIRVGSILKKVHTLKPGSCKRLRSKRIYKAYMPGKNGNDGVGLKSLLYYYDETCHPYVWIHDIGGDSMRMVKQQYISLEDLRDSSEIRIFRDQQRGCISVLKRTRLDLC 160
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Match: tr|I1MFE3|I1MFE3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G104100 PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.866e-57 Identity = 87/114 (76.32%), Postives = 100/114 (87.72%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTRPDLC 153 +PVELQIRVGSILKKVH LK G KR++SK IYKAYMPG++G++ VGLKSLLYYYDETC PY+WIHD+GG S+RMVKQQY+SLEDLR+ EIRI RDQ +GCISV KRTR DLC Sbjct: 47 RPVELQIRVGSILKKVHTLKPGSCKRLRSKRIYKAYMPGKNGNDGVGLKSLLYYYDETCHPYVWIHDIGGDSMRMVKQQYISLEDLRDSSEIRIFRDQQRGCISVLKRTRLDLC 160
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. Araport11
Match: AT3G06145.1 (| RING zinc finger protein | Chr3:1860118-1860618 REVERSE LENGTH=166 | 201606) HSP 1 Score: 119.783 bits (299), Expect = 6.142e-35 Identity = 57/110 (51.82%), Postives = 78/110 (70.91%), Query Frame = 0 Query: 40 KPVELQIRVGSILKKVHILKAGCSKRVKSKGIYKAYMPGRSGSNDVGLKSLLYYYDETCQPYIWIHDVGGGSLRMVKQQYVSLEDLRECCEIRILRDQHKGCISVCKRTR 149 +PVELQIRVGSILK+VH LK G SK+++ + I++AY+ + G YYD+TC PY+W+H+ G +MVKQQYVSLEDLR+ EIR+ +D +GC++V KR R Sbjct: 59 RPVELQIRVGSILKRVHTLKPGRSKKLRHRSIHRAYVDDQEGRR-------WLYYDDTCLPYVWVHETGTDLSKMVKQQYVSLEDLRDYSEIRVFKDLQRGCVAVEKRDR 161 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.1g069040.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.1g069040.1_tif_v1 ID=Vfaba.Tiffany.R1.1g069040.1_tif_v1; Name=Vfaba.Tiffany.R1.1g069040.1; organism=Vicia faba; type=mRNA; length=462bpback to top protein sequence of Vfaba.Tiffany.R1.1g069040.1_tif_v1 >Vfaba.Tiffany.R1.1g069040.1_tif_v1 ID=Vfaba.Tiffany.R1.1g069040.1_tif_v1; Name=Vfaba.Tiffany.R1.1g069040.1_tif_v1; organism=Vicia faba; type=polypeptide; length=153bpback to top mRNA from alignment at chr1S:595518559..595523758+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.1g069040.1_tif_v1 ID=Vfaba.Tiffany.R1.1g069040.1_tif_v1; Name=Vfaba.Tiffany.R1.1g069040.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr1S:595518559..595523758+ (Vicia fababack to top |