Vfaba.Tiffany.R1.2g135840.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2R6RB95|A0A2R6RB95_ACTCC (5'-adenylylsulfate reductase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09743 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.026e-13 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 0 Query: 98 DLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRP+RVFSLDTGRLNP+TYK D +
Sbjct: 104 DIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYKFFDTV 149
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A699ZEL4|A0A699ZEL4_HAELA (Thioredoxin domain-containing protein OS=Haematococcus lacustris OX=44745 GN=HaLaN_16692 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.810e-13 Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0 Query: 62 RTSSCGEKVVVQCD--SIADEVD--DPVEAVVLYPGMRPTDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITD 141
R +S + Q D +A E+D P+E + TD+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLN +TY++ D
Sbjct: 83 RQASVNVATITQLDWPKVASELDAKSPLEIMDHALATFGTDIGIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNAETYQVFD 166
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A388L5V1|A0A388L5V1_CHABU (Uncharacterized protein OS=Chara braunii OX=69332 GN=CBR_g24123 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.568e-13 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0 Query: 49 CENYTSGFLTFIERTSSCGEKVVVQCD--SIADEVDDPVEAVVLYPGMR--PTDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITD 141
CE+ + + + GE Q D ++A E+DD ++ + D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TY++ D
Sbjct: 95 CESQAAPPASVAKPAEQSGE-AATQTDYAALALEMDDAPPLAIMDKALELFGNDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFD 190
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P6U3K2|A0A2P6U3K2_CHLSO (Non-specific serine/threonine protein kinase OS=Chlorella sorokiniana OX=3076 GN=C2E21_0621 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.871e-13 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 75 DSIADEVDD--PVEAVVLYPGMRPTDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITD 141
+++A E+D P+E + +D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TY++ D
Sbjct: 2560 EALAAEMDSKSPLEIMDHALATFGSDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFD 2628
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P6U3J6|A0A2P6U3J6_CHLSO (Non-specific serine/threonine protein kinase OS=Chlorella sorokiniana OX=3076 GN=C2E21_0621 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.873e-13 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 75 DSIADEVDD--PVEAVVLYPGMRPTDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITD 141
+++A E+D P+E + +D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TY++ D
Sbjct: 2575 EALAAEMDSKSPLEIMDHALATFGSDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFD 2643
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7RGF8|A0A5A7RGF8_STRAF (Phosphoadenosine phosphosulfate reductase OS=Striga asiatica OX=4170 GN=STAS_34004 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.006e-12 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0 Query: 77 IADEVDD--PVEAVVLYPGMRPTDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCLMQLRN 148
+ADE+++ P+E + M D+ + SG E+V+LIEYAHL GRP+RVFSLDTGRLNP+TYK+ D + + N
Sbjct: 90 LADELENASPLEIMDKALEMFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYKLFDSVEKHYN 163
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7GUY1|A0A1J7GUY1_LUPAN (Thioredoxin domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_00590 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.102e-12 Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0 Query: 97 TDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
TD+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TY++ D +
Sbjct: 109 TDIGIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFDAV 155
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IV50|A0A445IV50_GLYSO (5'-adenylylsulfate reductase 3, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_022779 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.375e-12 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0 Query: 98 DLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TYK D +
Sbjct: 119 DIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYKFFDAV 164
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|Q8W1A1|Q8W1A1_SOYBN (Adenosine 5'-phosphosulfate reductase OS=Glycine max OX=3847 GN=547630 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.375e-12 Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0 Query: 98 DLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TYK D +
Sbjct: 119 DIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYKFFDAV 164
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6S7N1P8|A0A6S7N1P8_LACSI (Thioredoxin domain-containing protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS19651 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.598e-12 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 0 Query: 97 TDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCLMQLRN 148
D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TYK D + + N
Sbjct: 117 NDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYKFFDTVEKHYN 168
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P92980|APR3_ARATH (5'-adenylylsulfate reductase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APR3 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.007e-14 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0 Query: 97 TDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TY++ D +
Sbjct: 110 NDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFDTV 156
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P92979|APR1_ARATH (5'-adenylylsulfate reductase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APR1 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.308e-14 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0 Query: 97 TDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRP+RVFSLDTGRLNP+TY+ D +
Sbjct: 118 NDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDAV 164
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6Z4A7|APR1_ORYSJ (Probable 5'-adenylylsulfate reductase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=APR1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.247e-14 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0 Query: 75 DSIADEVD--DPVEAVVLYPGMRPTDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITD 141
+++A E+ P+E + M +D+ + SG E+V+LIEYA L GRP+RVFSLDTGRLNP+TY++ D
Sbjct: 94 EALAQELQGASPLEIMDRALAMFGSDIAIAFSGAEDVALIEYAKLTGRPFRVFSLDTGRLNPETYQLFD 162
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/Swiss-Prot
Match: sp|P92981|APR2_ARATH (5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APR2 PE=1 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 7.107e-12 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0 Query: 103 LSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
SG E+V+LIEYA L G+P+RVFSLDTGRLNP+TY++ D +
Sbjct: 116 FSGAEDVALIEYARLTGKPFRVFSLDTGRLNPETYRLFDAV 156
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. Araport11
Match: AT4G21990.1 (| APS reductase 3 | Chr4:11657284-11658973 REVERSE LENGTH=458 | 201606) HSP 1 Score: 73.559 bits (179), Expect = 1.030e-15 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0 Query: 97 TDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TY++ D +
Sbjct: 110 NDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFDTV 156
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. Araport11
Match: AT4G21990.2 (| APS reductase 3 | Chr4:11657591-11659147 REVERSE LENGTH=340 | 201606) HSP 1 Score: 73.1738 bits (178), Expect = 1.067e-15 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0 Query: 97 TDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRPYRVFSLDTGRLNP+TY++ D +
Sbjct: 145 NDIAIAFSGAEDVALIEYAHLTGRPYRVFSLDTGRLNPETYRLFDTV 191
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. Araport11
Match: AT4G04610.1 (| APS reductase 1 | Chr4:2325069-2326718 FORWARD LENGTH=465 | 201606) HSP 1 Score: 71.2478 bits (173), Expect = 5.431e-15 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0 Query: 97 TDLRMRLSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
D+ + SG E+V+LIEYAHL GRP+RVFSLDTGRLNP+TY+ D +
Sbjct: 118 NDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDAV 164
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. Araport11
Match: AT1G62180.2 (| 5'adenylylphosphosulfate reductase 2 | Chr1:22975794-22977465 REVERSE LENGTH=447 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 7.164e-13 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0 Query: 103 LSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
SG E+V+LIEYA L G+P+RVFSLDTGRLNP+TY++ D +
Sbjct: 109 FSGAEDVALIEYARLTGKPFRVFSLDTGRLNPETYRLFDAV 149
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. Araport11
Match: AT1G62180.1 (| 5'adenylylphosphosulfate reductase 2 | Chr1:22975794-22977465 REVERSE LENGTH=454 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 7.271e-13 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0 Query: 103 LSGVENVSLIEYAHLMGRPYRVFSLDTGRLNPKTYKITDCL 143
SG E+V+LIEYA L G+P+RVFSLDTGRLNP+TY++ D +
Sbjct: 116 FSGAEDVALIEYARLTGKPFRVFSLDTGRLNPETYRLFDAV 156 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of Vfaba.Tiffany.R1.2g135840.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 5 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.2g135840.1_tif_v1 ID=Vfaba.Tiffany.R1.2g135840.1_tif_v1; Name=Vfaba.Tiffany.R1.2g135840.1; organism=Vicia faba; type=mRNA; length=465bpback to top protein sequence of Vfaba.Tiffany.R1.2g135840.1_tif_v1 >Vfaba.Tiffany.R1.2g135840.1_tif_v1 ID=Vfaba.Tiffany.R1.2g135840.1_tif_v1; Name=Vfaba.Tiffany.R1.2g135840.1_tif_v1; organism=Vicia faba; type=polypeptide; length=154bpback to top mRNA from alignment at chr2:1069672873..1069675201+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.2g135840.1_tif_v1 ID=Vfaba.Tiffany.R1.2g135840.1_tif_v1; Name=Vfaba.Tiffany.R1.2g135840.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:1069672873..1069675201+ (Vicia fababack to top |