Vfaba.Tiffany.R1.3g009560.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V2S2|A0A1S3V2S2_VIGRR (bet1-like SNARE 1-2 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771094 PE=4 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 5.684e-79 Identity = 114/133 (85.71%), Postives = 122/133 (91.73%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 MSYRRDNR S+SSLLDG DSLEEGG+RASSSYS +INEHDNDKAI TL D+VSFLK+LTGDIHEEVESHN +LDRVGNKMD SRGMM+GTMDRFKKVFEKKS RKTCS VGYF L FIFIYYLIR+LGYFTLG Sbjct: 1 MSYRRDNRPSRSSLLDGFDSLEEGGLRASSSYSRDINEHDNDKAIETLHDKVSFLKRLTGDIHEEVESHNQLLDRVGNKMDASRGMMMGTMDRFKKVFEKKSARKTCSYVGYFTLAFIFIYYLIRILGYFTLG 133
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4QW07|A0A6A4QW07_LUPAL (Putative target SNARE coiled-coil domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00034251 PE=4 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 4.327e-78 Identity = 113/133 (84.96%), Postives = 124/133 (93.23%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 M+YRR+NRSSKSSL+DG DSLEEGGIRASSSYS EINE DNDKA+ +L DRV+FLK+LTGDIHEEVESHN++LDRVGNKMDGSRGMM GTMDRFKKVFE KSTRKTCSLV YF +GFIFIYYLIR+LGYFTLG Sbjct: 1 MNYRRENRSSKSSLIDGFDSLEEGGIRASSSYSREINEQDNDKAMESLHDRVTFLKRLTGDIHEEVESHNNLLDRVGNKMDGSRGMMFGTMDRFKKVFETKSTRKTCSLVAYFIVGFIFIYYLIRMLGYFTLG 133
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SUS7|A0A0S3SUS7_PHAAN (t-SNARE coiled-coil homology domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G357400 PE=4 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 5.693e-78 Identity = 111/133 (83.46%), Postives = 122/133 (91.73%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 MSYRRDNR S+SS++DG DSLEEGG+RASSSYS +INEHDNDKAI TL D+VSFLK+LTGDIHEEVESHN +LDRVGNKMD SRGMM+GTMDRFKKVFEKKS RKTCS VGYF L FIF+YYLIR+LGYFTLG Sbjct: 1 MSYRRDNRPSRSSVVDGFDSLEEGGLRASSSYSRDINEHDNDKAIETLHDKVSFLKRLTGDIHEEVESHNQLLDRVGNKMDASRGMMMGTMDRFKKVFEKKSARKTCSYVGYFTLAFIFVYYLIRILGYFTLG 133
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TUA2|A0A0L9TUA2_PHAAN (t-SNARE coiled-coil homology domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g010700 PE=4 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 5.693e-78 Identity = 111/133 (83.46%), Postives = 122/133 (91.73%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 MSYRRDNR S+SS++DG DSLEEGG+RASSSYS +INEHDNDKAI TL D+VSFLK+LTGDIHEEVESHN +LDRVGNKMD SRGMM+GTMDRFKKVFEKKS RKTCS VGYF L FIF+YYLIR+LGYFTLG Sbjct: 1 MSYRRDNRPSRSSVVDGFDSLEEGGLRASSSYSRDINEHDNDKAIETLHDKVSFLKRLTGDIHEEVESHNQLLDRVGNKMDASRGMMMGTMDRFKKVFEKKSARKTCSYVGYFTLAFIFVYYLIRILGYFTLG 133
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|I3S539|I3S539_MEDTR (Bet1-like SNARE protein 1-1 OS=Medicago truncatula OX=3880 GN=25483015 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 1.021e-75 Identity = 122/133 (91.73%), Postives = 128/133 (96.24%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 M+YRRDNRSS+SSLLDGLDSLEEGG+RASSSYS EINEHDND AI+TL DRVSFLK+LTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYF L FIFIYYLIR+LGYFTLG Sbjct: 1 MNYRRDNRSSRSSLLDGLDSLEEGGLRASSSYSSEINEHDNDNAIDTLHDRVSFLKRLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFTLAFIFIYYLIRMLGYFTLG 133
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445F2J7|A0A445F2J7_GLYSO (Bet1-like SNARE 1-2 (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_053563 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 6.306e-75 Identity = 110/129 (85.27%), Postives = 119/129 (92.25%), Query Frame = 0 Query: 5 RDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 RDNRSS+SSL+DG DSLEEGG+RASSSYS EINEHDNDKAI +L+DRVSFLK+LTGDIHEEVESHN +LDRVG KMDGSRGMM+GTMDRFK VFEKKS RKTCSLV YF L FIFIYYLIR+LGYFTLG Sbjct: 1 RDNRSSRSSLVDGFDSLEEGGLRASSSYSREINEHDNDKAIESLEDRVSFLKRLTGDIHEEVESHNQLLDRVGIKMDGSRGMMMGTMDRFKNVFEKKSARKTCSLVVYFTLAFIFIYYLIRMLGYFTLG 129
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MUM1|A0A4D6MUM1_VIGUN (Blocked early in transport 1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g113 PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.142e-73 Identity = 109/133 (81.95%), Postives = 119/133 (89.47%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 MSYRRDNR S+SSL+DG DSLEEGG+RASSSYS EINE DNDKA+ TL D+VSFLK+LTGDIHEEVESHN +LDRVGNKMD SRGMM+GTMDRFKKVFEKKS RKTCS VGYF L FIFIYYLIR L YF++G Sbjct: 1 MSYRRDNRPSRSSLVDGFDSLEEGGLRASSSYSREINEQDNDKAMETLHDKVSFLKRLTGDIHEEVESHNQLLDRVGNKMDASRGMMMGTMDRFKKVFEKKSARKTCSYVGYFTLAFIFIYYLIRCL-YFSVG 132
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y3B7|A0A1S2Y3B7_CICAR (bet1-like SNARE 1-2 OS=Cicer arietinum OX=3827 GN=LOC101502755 PE=4 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.242e-72 Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 M+YRRDNRSS+SSLLDG+DSLEEGG+RASSSY+PEINEHDNDKAI +L D+V+FLK+LTGDIHEEVE+HNS+LDRVGNKMDGSRGMMLGTMDRFK VFEK+STRKTCSL YF L FIFIYYLIR+LGYFTLG Sbjct: 1 MNYRRDNRSSRSSLLDGIDSLEEGGLRASSSYAPEINEHDNDKAIESLHDKVTFLKRLTGDIHEEVETHNSLLDRVGNKMDGSRGMMLGTMDRFKMVFEKRSTRKTCSLAAYFTLAFIFIYYLIRMLGYFTLG 133
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|K7LGR9|K7LGR9_SOYBN (t-SNARE coiled-coil homology domain-containing protein OS=Glycine max OX=3847 GN=100818014 PE=4 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.895e-72 Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = 0 Query: 14 LLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 L+DG DSLEEGG+RASSSYS EINEHDNDKAI LQDRVSFLK+LTGDIHEEVESHN +LDRVGNKMDGSRG+M+GTMDRFKKVFEKKS RKTCSLVGYF L FIFIYYLIR+LGYFTLG Sbjct: 14 LVDGFDSLEEGGLRASSSYSREINEHDNDKAIENLQDRVSFLKRLTGDIHEEVESHNQLLDRVGNKMDGSRGVMMGTMDRFKKVFEKKSARKTCSLVGYFTLAFIFIYYLIRMLGYFTLG 133
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IG47|A0A445IG47_GLYSO (Bet1-like SNARE 1-2 OS=Glycine soja OX=3848 GN=D0Y65_025638 PE=4 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.254e-71 Identity = 113/159 (71.07%), Postives = 121/159 (76.10%), Query Frame = 0 Query: 5 RDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLK------------------------------QLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGYFTLG 133 RDNRSS+SSL+DG DSLEEGG+RASSSYS EINEHDNDKAI LQDRVSFLK +LTGDIHEEVESHN +LDRVGNKMDGSRG+M+GTMDRFKKVFEKKS RKTCSLVGYF L FIFIYYLIR+LGYFTLG Sbjct: 59 RDNRSSRSSLVDGFDSLEEGGLRASSSYSREINEHDNDKAIENLQDRVSFLKREFLVLTNVKVHGKVLLVFKVLPAMVLLLFKLTGDIHEEVESHNQLLDRVGNKMDGSRGVMMGTMDRFKKVFEKKSARKTCSLVGYFTLAFIFIYYLIRMLGYFTLG 217
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94CG2|BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4) HSP 1 Score: 180.644 bits (457), Expect = 9.911e-59 Identity = 85/129 (65.89%), Postives = 109/129 (84.50%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGY 129 M++RR+NR+S++SL DGLD LEEG +RASSSY+ + E DND+A+ LQDRVSFLK++TGDIHEEVE+HN +LD+VGNKMD +RG+M GT++RFK VFEKKS RK+C L+ YF L F+ +YYLIRLL Y Sbjct: 1 MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHD--ERDNDEALENLQDRVSFLKRVTGDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYYLIRLLNY 127
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M2J9|BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.102e-47 Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIR 125 M+ RR+ R +SSL DG+ EEGGIRA+SSYS EINEH+N++A+ LQDRV LK+L+GDI+EEV++HN MLDR+GN MD SRG + GTMDRFK VFE KS+R+ +LV F F+ IYYL R Sbjct: 1 MNPRREPRGGRSSLFDGI---EEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYLTR 122
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. Araport11
Match: AT4G14455.1 (| Target SNARE coiled-coil domain protein | Chr4:8310482-8311938 FORWARD LENGTH=130 | 201606) HSP 1 Score: 180.644 bits (457), Expect = 1.014e-59 Identity = 85/129 (65.89%), Postives = 109/129 (84.50%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIRLLGY 129 M++RR+NR+S++SL DGLD LEEG +RASSSY+ + E DND+A+ LQDRVSFLK++TGDIHEEVE+HN +LD+VGNKMD +RG+M GT++RFK VFEKKS RK+C L+ YF L F+ +YYLIRLL Y Sbjct: 1 MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHD--ERDNDEALENLQDRVSFLKRVTGDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYYLIRLLNY 127
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. Araport11
Match: AT3G58170.1 (| BET1P/SFT1P-like protein 14A | Chr3:21542632-21543775 REVERSE LENGTH=122 | 201606) HSP 1 Score: 151.754 bits (382), Expect = 2.150e-48 Identity = 76/125 (60.80%), Postives = 96/125 (76.80%), Query Frame = 0 Query: 1 MSYRRDNRSSKSSLLDGLDSLEEGGIRASSSYSPEINEHDNDKAINTLQDRVSFLKQLTGDIHEEVESHNSMLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLVGYFALGFIFIYYLIR 125 M+ RR+ R +SSL DG+ EEGGIRA+SSYS EINEH+N++A+ LQDRV LK+L+GDI+EEV++HN MLDR+GN MD SRG + GTMDRFK VFE KS+R+ +LV F F+ IYYL R Sbjct: 1 MNPRREPRGGRSSLFDGI---EEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYLTR 122 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 2
BLAST of Vfaba.Tiffany.R1.3g009560.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.3g009560.1_tif_v1 ID=Vfaba.Tiffany.R1.3g009560.1_tif_v1; Name=Vfaba.Tiffany.R1.3g009560.1; organism=Vicia faba; type=mRNA; length=402bpback to top protein sequence of Vfaba.Tiffany.R1.3g009560.1_tif_v1 >Vfaba.Tiffany.R1.3g009560.1_tif_v1 ID=Vfaba.Tiffany.R1.3g009560.1_tif_v1; Name=Vfaba.Tiffany.R1.3g009560.1_tif_v1; organism=Vicia faba; type=polypeptide; length=133bpback to top mRNA from alignment at chr3:25817669..25820206+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.3g009560.1_tif_v1 ID=Vfaba.Tiffany.R1.3g009560.1_tif_v1; Name=Vfaba.Tiffany.R1.3g009560.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:25817669..25820206+ (Vicia fababack to top |