Vfaba.Tiffany.R1.3g036120.1

Transcript Overview
NameVfaba.Tiffany.R1.3g036120.1
Unique NameVfaba.Tiffany.R1.3g036120.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length447
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:233597205..233597953 +Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR273Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR297Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL132Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL378Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL664Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL044Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL201Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL294Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL306Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL333Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL509Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cctifL0367Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL066Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cctifL0592Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL249Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cctifL0621Cajanus cajan Asha genome v1.0Cajanus cajan
cctifL0754Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL387Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cctifL0838Cajanus cajan Asha genome v1.0Cajanus cajan
pvtifL025Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tiftifR198Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifL155Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL216Pisum sativum Cameor genome v1aPisum sativum
pvtifL507Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL580Pisum sativum Cameor genome v1aPisum sativum
pstifL684Pisum sativum Cameor genome v1aPisum sativum
pvtifL627Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuR343Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR359Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR393Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR222Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR400Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR413Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR255Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifL238Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL390Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL408Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0677Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0892Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL1214Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR329Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR335Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR349Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR417Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR297Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR308Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR342Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR397Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR433Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL043Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL163Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL238Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL446Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g044760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g036120Vfaba.Tiffany.R1.3g036120_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g036120.1_tif_v1-exonVfaba.Tiffany.R1.3g036120.1_tif_v1-exon-chr3_tif_v1:233597205..233597293Vicia fabaexon
Vfaba.Tiffany.R1.3g036120.1_tif_v1-exonVfaba.Tiffany.R1.3g036120.1_tif_v1-exon-chr3_tif_v1:233597596..233597953Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g036120.1_tif_v1-cdsVfaba.Tiffany.R1.3g036120.1_tif_v1-cds-chr3_tif_v1:233597205..233597293Vicia fabaCDS
Vfaba.Tiffany.R1.3g036120.1_tif_v1-cdsVfaba.Tiffany.R1.3g036120.1_tif_v1-cds-chr3_tif_v1:233597596..233597953Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g036120.1_tif_v1Vfaba.Tiffany.R1.3g036120.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.3g036120.1_tif_v1Vfaba.Tiffany.R1.3g036120.1_tif_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R1S3|A0A0S3R1S3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G220100 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.387e-19
Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     +  KDK+ L +
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKDKQALKS 120
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TLE2|A0A0L9TLE2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g096800 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.387e-19
Identity = 44/67 (65.67%), Postives = 52/67 (77.61%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     +  KDK+ L +
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKDKQALKS 120
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0K9PKS7|A0A0K9PKS7_ZOSMR (60S ribosomal protein L34 OS=Zostera marina OX=29655 GN=ZOSMA_20G01160 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.045e-19
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKRNLA 93
            IP+LRPT+Y+RSRLSRN R VNRAYGGVLSG AVRER+IRAFL+EE+   +     + TKDK+  A
Sbjct:   54 IPHLRPTQYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLIEEQKIVKKVLKIQKTKDKQAKA 119
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S4CM46|A0A1S4CM46_TOBAC (60S ribosomal protein L34-like OS=Nicotiana tabacum OX=4097 GN=LOC107820542 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.261e-19
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0 
Query:   30 RIPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            +IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA 
Sbjct:   16 QIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAA 81
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A200RAS8|A0A200RAS8_9MAGN (Ribosomal protein L34Ae OS=Macleaya cordata OX=56857 GN=BVC80_1685g3 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.075e-18
Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEESFEDTKDKRNLATHKPRE 99
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+          DK+ L   K +E
Sbjct:   67 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI--------DKKVLKIQKAKE 127
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5J5AGW1|A0A5J5AGW1_9ASTE (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033773 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.339e-18
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKR 90
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     + TK+K+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQ 116
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1U7XFS1|A0A1U7XFS1_NICSY (60S ribosomal protein L34-like OS=Nicotiana sylvestris OX=4096 GN=LOC104233587 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-18
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAS 118
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J6KSN1|A0A1J6KSN1_NICAT (60s ribosomal protein l34 OS=Nicotiana attenuata OX=49451 GN=RPL34_0 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-18
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAS 118
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3XUR7|A0A1S3XUR7_TOBAC (60S ribosomal protein L34-like OS=Nicotiana tabacum OX=4097 GN=LOC107768952 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.413e-18
Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAS 118
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P9EF84|A0A6P9EF84_JUGRE (60S ribosomal protein L34 OS=Juglans regia OX=51240 GN=LOC109013174 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.680e-18
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKR 90
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     + TK+K+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQ 116
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40590|RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.410e-21
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNFEE---SFEDTKDKR 90
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   +     + TK+K+
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQ 116
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Match: sp|P41098|RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.469e-21
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF-EESFEDTKDKRNLAT 94
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+   ++  +  K K  LA 
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAA 118
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FE65|RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.658e-20
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q42351|RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.364e-20
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP+EY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJW6|RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.775e-19
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP EY+RSRL+RN R VNRAYGGVLSG AVRER++RAFLVEE+  
Sbjct:   54 IPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKI 102
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Match: sp|O42846|RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3401 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 6.375e-10
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP LRP E+  +RLS N + V RAYGG LS  AV++R++RAFL+EE+  
Sbjct:   54 IPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAFLIEEQKI 100
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9URT8|RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3402 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 9.230e-10
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP LRP E+  +RLS N + V RAYGG LS  AV++R++RAFL+EE+  
Sbjct:   54 IPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAFLIEEQKI 100
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. Araport11
Match: AT1G69620.1 (| ribosomal protein L34 | Chr1:26189900-26191081 FORWARD LENGTH=119 | 201606)

HSP 1 Score: 83.9593 bits (206), Expect = 1.696e-21
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRPTEY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. Araport11
Match: AT1G26880.1 (| Ribosomal protein L34e superfamily protein | Chr1:9315640-9316681 REVERSE LENGTH=120 | 201606)

HSP 1 Score: 82.4185 bits (202), Expect = 6.511e-21
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP+EY+RSRLSRN R VNRAYGGVLSG AVRER+IRAFLVEE+  
Sbjct:   54 IPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKI 102
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. Araport11
Match: AT3G28900.1 (| Ribosomal protein L34e superfamily protein | Chr3:10902864-10904415 REVERSE LENGTH=120 | 201606)

HSP 1 Score: 79.7221 bits (195), Expect = 8.977e-20
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMIRAFLVEEKNF 79
            IP+LRP EY+RSRL+RN R VNRAYGGVLSG AVRER++RAFLVEE+  
Sbjct:   54 IPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKI 102
[Close]
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. Araport11
Match: AT1G26880.2 (| Ribosomal protein L34e superfamily protein | Chr1:9315798-9316681 REVERSE LENGTH=96 | 201606)

HSP 1 Score: 66.2402 bits (160), Expect = 7.737e-15
Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0 
Query:   31 IPYLRPTEYERSRLSRNLRIVNRAYGGVLSGRAVRERMI 69
            IP+LRP+EY+RSRLSRN R VNRAYGGVLSG AVRER +
Sbjct:   54 IPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERFV 92
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3R1S3|A0A0S3R1S3_PHAAN3.387e-1965.67Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9TLE2|A0A0L9TLE2_PHAAN3.387e-1965.67Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A0K9PKS7|A0A0K9PKS7_ZOSMR6.045e-1965.1560S ribosomal protein L34 OS=Zostera marina OX=296... [more]
tr|A0A1S4CM46|A0A1S4CM46_TOBAC7.261e-1966.6760S ribosomal protein L34-like OS=Nicotiana tabacu... [more]
tr|A0A200RAS8|A0A200RAS8_9MAGN1.075e-1865.22Ribosomal protein L34Ae OS=Macleaya cordata OX=568... [more]
tr|A0A5J5AGW1|A0A5J5AGW1_9ASTE1.339e-1868.25Uncharacterized protein OS=Nyssa sinensis OX=56137... [more]
tr|A0A1U7XFS1|A0A1U7XFS1_NICSY1.413e-1867.6960S ribosomal protein L34-like OS=Nicotiana sylves... [more]
tr|A0A1J6KSN1|A0A1J6KSN1_NICAT1.413e-1867.6960s ribosomal protein l34 OS=Nicotiana attenuata O... [more]
tr|A0A1S3XUR7|A0A1S3XUR7_TOBAC1.413e-1867.6960S ribosomal protein L34-like OS=Nicotiana tabacu... [more]
tr|A0A6P9EF84|A0A6P9EF84_JUGRE1.680e-1868.2560S ribosomal protein L34 OS=Juglans regia OX=5124... [more]
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BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
sp|P40590|RL34_PEA5.410e-2168.2560S ribosomal protein L34 OS=Pisum sativum OX=3888... [more]
sp|P41098|RL34_TOBAC5.469e-2167.6960S ribosomal protein L34 OS=Nicotiana tabacum OX=... [more]
sp|Q9FE65|RL342_ARATH1.658e-2081.6360S ribosomal protein L34-2 OS=Arabidopsis thalian... [more]
sp|Q42351|RL341_ARATH6.364e-2079.5960S ribosomal protein L34-1 OS=Arabidopsis thalian... [more]
sp|Q9LJW6|RL343_ARATH8.775e-1975.5160S ribosomal protein L34-3 OS=Arabidopsis thalian... [more]
sp|O42846|RL34A_SCHPO6.375e-1055.1060S ribosomal protein L34-A OS=Schizosaccharomyces... [more]
sp|Q9URT8|RL34B_SCHPO9.230e-1055.1060S ribosomal protein L34-B OS=Schizosaccharomyces... [more]
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BLAST of Vfaba.Tiffany.R1.3g036120.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G69620.11.696e-2181.63| ribosomal protein L34 | Chr1:26189900-26191081 F... [more]
AT1G26880.16.511e-2179.59| Ribosomal protein L34e superfamily protein | Chr... [more]
AT3G28900.18.977e-2075.51| Ribosomal protein L34e superfamily protein | Chr... [more]
AT1G26880.27.737e-1579.49| Ribosomal protein L34e superfamily protein | Chr... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.20.340.10coord: 22..98
e-value: 2.8E-18
score: 67.6
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 29..73
e-value: 1.0E-9
score: 38.5
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 15..80

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.3g036120.1_tif_v1 ID=Vfaba.Tiffany.R1.3g036120.1_tif_v1; Name=Vfaba.Tiffany.R1.3g036120.1; organism=Vicia faba; type=mRNA; length=447bp
ATGAGAATAACGGATAGTTCTGAGAATCCTCCACCTGTGACTAGATCTGA
GATTCTAGAAGGAAAAGTGAAGGATCATCTATGGAGGAGGATTCCATATT
TGAGACCTACTGAATACGAGAGGTCTAGATTGTCTCGCAACCTTCGAATA
GTTAATAGAGCATATGGTGGTGTTTTATCTGGAAGAGCTGTTAGGGAAAG
GATGATTCGTGCTTTCCTTGTTGAAGAGAAAAATTTTGAAGAAAGTTTTG
AAGATACAAAAGACAAAAGAAATCTAGCAACCCATAAACCTCGAGAATCT
TTCTCGTTTGAACCCAATAATTTCATCAATAAAATTGTTCCTTCTTGCAT
CCTGAAACTCATCTCTTCATTCTTCTACCGTCCCATCAACCTTCATGTCC
ATGTATTTCTTCCTTTGCTGTTGGAGTTCCCCTTATCTCACCGATAG
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protein sequence of Vfaba.Tiffany.R1.3g036120.1_tif_v1

>Vfaba.Tiffany.R1.3g036120.1_tif_v1 ID=Vfaba.Tiffany.R1.3g036120.1_tif_v1; Name=Vfaba.Tiffany.R1.3g036120.1_tif_v1; organism=Vicia faba; type=polypeptide; length=148bp
MRITDSSENPPPVTRSEILEGKVKDHLWRRIPYLRPTEYERSRLSRNLRI
VNRAYGGVLSGRAVRERMIRAFLVEEKNFEESFEDTKDKRNLATHKPRES
FSFEPNNFINKIVPSCILKLISSFFYRPINLHVHVFLPLLLEFPLSHR
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mRNA from alignment at chr3:233597205..233597953+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.3g036120.1_tif_v1 ID=Vfaba.Tiffany.R1.3g036120.1_tif_v1; Name=Vfaba.Tiffany.R1.3g036120.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:233597205..233597953+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008195Ribosomal_eL34
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation