Vfaba.Tiffany.R1.3g067000.1

Transcript Overview


Name	Vfaba.Tiffany.R1.3g067000.1
Unique Name	Vfaba.Tiffany.R1.3g067000.1_tif_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	546

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr3	chromosome	chr3:468359638..468360183 +	Vicia faba cv. Tiffany genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba cv. Tiffany genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11	2023-05-10

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
tifzwsR268	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifzwsR295	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
astifL294	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
catifL207	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL289	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cctifL0156	Cajanus cajan Asha genome v1.0	Cajanus cajan
cctifL0595	Cajanus cajan Asha genome v1.0	Cajanus cajan
crtifL255	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crtifL374	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pstifL209	Pisum sativum Cameor genome v1a	Pisum sativum
pstifL577	Pisum sativum Cameor genome v1a	Pisum sativum
pstifL613	Pisum sativum Cameor genome v1a	Pisum sativum
pvtifL563	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvfhR220	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvuR394	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvuR418	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvfhR264	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
caitifL253	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL358	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
antifL0432	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL0679	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL0814	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL1130	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
tifvrvR411	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvuaR335	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvuaR337	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR377	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
tifvssR415	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cantifL170	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cantifL230	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
rna-KK1_035834	Cajanus cajan Asha genome v1.0	Cajanus cajan
evm.model.Chr06.1267	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_15511	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_31686	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
jg3058.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
evm.model.Chr07.1246	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vigun07g158400.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Cr_10160.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
rna-XM_014656678.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Phvul.006G105500.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
rna-XM_004495518.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Ca_08499.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Psat06G0387600-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
rna-TanjilR_10849	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_10139	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
LR48_mrnaVigan10g157100	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Vigun06g116400.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Ca_03786	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
rna-KK1_007223	Cajanus cajan Asha genome v1.0	Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vfaba.Hedin2.R1.5g187160.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vfaba.Hedin2.R1.3g079840.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g067000	Vfaba.Tiffany.R1.3g067000_tif_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g067000.1_tif_v1-exon	Vfaba.Tiffany.R1.3g067000.1_tif_v1-exon-chr3_tif_v1:468359638..468360183	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g067000.1_tif_v1-cds	Vfaba.Tiffany.R1.3g067000.1_tif_v1-cds-chr3_tif_v1:468359638..468360183	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g067000.1_tif_v1	Vfaba.Tiffany.R1.3g067000.1_tif_v1	Vicia faba	polypeptide
Vfaba.Tiffany.R1.3g067000.1_tif_v1	Vfaba.Tiffany.R1.3g067000.1_tif_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A438J9L1|A0A438J9L1_VITVI (Protein light-dependent short hypocotyls 1 OS=Vitis vinifera OX=29760 GN=LSH1_0 PE=3 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.094e-92
Identity = 135/187 (72.19%), Postives = 153/187 (81.82%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTS------SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKITAPTTAS 181
            MDLVS+S N        P S S+I N +N +  ST +S      SRYENQKRRDWNTF QYLRNHRPPLSL+LC+GAHVLEFL YLDQFGKTKVHN  CPFFG+ NPPAPCPCPLRQAWGSLDAL+GRLRAAYEE+GG+PE NPFG+R+VR+YLR+VRDFQAKARGVSYEKKRKR+KPK+  P   +
Sbjct:    1 MDLVSQSGN--------PNSVSTIINPNNPNTSSTISSPAVYAPSRYENQKRRDWNTFGQYLRNHRPPLSLSLCNGAHVLEFLRYLDQFGKTKVHNQTCPFFGLKNPPAPCPCPLRQAWGSLDALIGRLRAAYEEHGGKPEANPFGARAVRLYLREVRDFQAKARGVSYEKKRKRSKPKLAPPPAGA 179

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|F6H618|F6H618_VITVI (ALOG domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_14s0036g00540 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 1.293e-92
Identity = 135/187 (72.19%), Postives = 153/187 (81.82%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTS------SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKITAPTTAS 181
            MDLVS+S N        P S S+I N +N +  ST +S      SRYENQKRRDWNTF QYLRNHRPPLSL+LC+GAHVLEFL YLDQFGKTKVHN  CPFFG+ NPPAPCPCPLRQAWGSLDAL+GRLRAAYEE+GG+PE NPFG+R+VR+YLR+VRDFQAKARGVSYEKKRKR+KPK+  P   +
Sbjct:    1 MDLVSQSGN--------PNSVSTIINPNNPNTSSTISSPAVYAPSRYENQKRRDWNTFGQYLRNHRPPLSLSLCNGAHVLEFLRYLDQFGKTKVHNQTCPFFGLKNPPAPCPCPLRQAWGSLDALIGRLRAAYEEHGGKPEANPFGARAVRLYLREVRDFQAKARGVSYEKKRKRSKPKLAPPPAGA 179

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LRJ9|A0A2Z6LRJ9_TRISU (ALOG domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_33610 PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 6.611e-90
Identity = 157/185 (84.86%), Postives = 168/185 (90.81%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTSS------RYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKITAPTT 179
            M+LV  STNS+L   +SPTSGSSITNN + SG ++ + S      RYENQKRRDWNTFCQYLRNHRPPLSLALCSG+HVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGGRPETNPFGSRSVRIYLRDVRD+QAKARGVSYEKKRKR KPK+TAPTT
Sbjct:    1 MNLVPSSTNSSL---DSPTSGSSITNNGSGSGSASGSGSSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGSHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDYQAKARGVSYEKKRKRPKPKVTAPTT 182

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3KJD1|A0A2K3KJD1_TRIPR (ALOG domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g055060 PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.666e-89
Identity = 148/172 (86.05%), Postives = 155/172 (90.12%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCS--------TPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYE 164
            MDLVS +TN++L   ESPTSGSSITNN + SG          TPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSG+HVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGGRPETNPFGSR VRIYLRDVRD+QAKARGVSYE
Sbjct:    1 MDLVS-TTNTSL---ESPTSGSSITNNGSASGSGSGSGSGSLTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGSHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGSRCVRIYLRDVRDYQAKARGVSYE 168

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|V7BGL2|V7BGL2_PHAVU (ALOG domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G122300g PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 4.897e-88
Identity = 148/184 (80.43%), Postives = 161/184 (87.50%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSI-----TNNSNTSGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKIT-APT 178
            MDLVSES  S   K+E+PTS  +      ++ S+ S   + T SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFL+YLDQFGKTKVHNHPCPFFG+PNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGGRPETNPFG+R+VRIYLRDVRDFQAKARGVSYEKKRKR K K+T APT
Sbjct:    1 MDLVSESA-SPRYKMETPTSNPTTGTSAVSSPSSGSNSGSTTPSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLHYLDQFGKTKVHNHPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQAKARGVSYEKKRKRPKSKLTPAPT 183

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|G7I6S2|G7I6S2_MEDTR (Light-dependent short hypocotyls protein OS=Medicago truncatula OX=3880 GN=11410018 PE=3 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 6.859e-87
Identity = 156/183 (85.25%), Postives = 168/183 (91.80%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTSS--RYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKITAPTTAS 181
            MDLVS  + ST   +ESPTSGSS+TNNS  SG ST T +  RYENQKRRDWNTFCQYLRNHRPPLSLALCSG+HVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAK+RGVSYEKKRKR KPK++A T+++
Sbjct:    1 MDLVS--SGSTNQSVESPTSGSSMTNNSTGSGSSTSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGSHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKSRGVSYEKKRKRPKPKVSATTSSA 181

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7GP48|A0A3Q7GP48_SOLLC (ALOG domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.838e-86
Identity = 121/171 (70.76%), Postives = 140/171 (81.87%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTS-GCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRT 170
            MD V+   N+  +   +   G++   NS T    S P  SRYENQKRRDWNTFCQY+RNH+PPLSL  C+ AH+LEFL YLDQFGKTKVHN  CPFFG+ NPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGG+PE NPFGSR+VR++LR+VRDFQ+K+RGVSYEKKRKRT
Sbjct:    1 MDFVTAQGNNFTTSGNNMVQGTNFIANSTTMIESSVPPLSRYENQKRRDWNTFCQYVRNHQPPLSLPQCTSAHILEFLRYLDQFGKTKVHNQNCPFFGLLNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGKPEMNPFGSRNVRLFLREVRDFQSKSRGVSYEKKRKRT 171

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A2XR18|A0A6A2XR18_HIBSY (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111402pilonHSYRG00593 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.044e-86
Identity = 126/180 (70.00%), Postives = 144/180 (80.00%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTS---SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKITAP 177
            MDLVS  +N   +   SP  G ++  NS  +  ST  S   SRYENQKRRDWNTFCQYLRNHRPPLS++ CSGAHVL+FL YLDQFGK KVHN  CPFFG+PNPPAPC CPLRQAWGSLDAL+GRLR AYEE+GG+PE +PFG+R+ RI+LR+VRDFQAKARGVSYEKKRKR   K+  P
Sbjct:    1 MDLVSPQSNP--NNFPSPILGLNLVANSTETPISTTASTTRSRYENQKRRDWNTFCQYLRNHRPPLSVSKCSGAHVLKFLRYLDQFGKIKVHNQTCPFFGLPNPPAPCSCPLRQAWGSLDALIGRLRDAYEEHGGKPEGSPFGARAARIFLREVRDFQAKARGVSYEKKRKRPMQKVEPP 178

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1U7V605|A0A1U7V605_NICSY (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like OS=Nicotiana sylvestris OX=4096 GN=LOC104215484 PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 2.913e-86
Identity = 124/171 (72.51%), Postives = 140/171 (81.87%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSG-CSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRT 170
            MD V+   N  L+   S   G++   NS T    S P  SRYENQKRRDWNTFCQYLRNH PPLSL  CSGAHVLEFL YLDQFGKTKVHN  CPFFG+ NPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGG+PE NPFG+R+VR++LR+VRDFQ+K+RG+SYEKKRKR+
Sbjct:    1 MDFVTAQGN--LTSGNSMVQGTNFLPNSTTVIPSSAPPLSRYENQKRRDWNTFCQYLRNHHPPLSLPHCSGAHVLEFLRYLDQFGKTKVHNQNCPFFGLQNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGKPEMNPFGARAVRLFLREVRDFQSKSRGISYEKKRKRS 169

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6N2BBZ0|A0A6N2BBZ0_SOLCI (ALOG domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_014241 PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.161e-86
Identity = 122/175 (69.71%), Postives = 139/175 (79.43%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTS-GCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKI 174
            MD V+   N+  +   +   G++   NS T    S P  SRYENQKRRDWNTFCQY+RNHRPPLSL  C+ AH+LEFL YLDQFGKTKVHN  CPFFG+ NPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGG  E NPFGSR+VR++LR+VRDFQ+K+RGVSYEKKRKRT   I
Sbjct:    1 MDFVTAQGNNFTTSSNNMVQGTNFIANSTTMIESSVPPLSRYENQKRRDWNTFCQYVRNHRPPLSLPQCTSAHILEFLRYLDQFGKTKVHNQNCPFFGLLNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGNQEMNPFGSRNVRLFLREVRDFQSKSRGVSYEKKRKRTSSSI 175

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6NNI3|LSH1_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 OS=Arabidopsis thaliana OX=3702 GN=LSH1 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.897e-78
Identity = 126/170 (74.12%), Postives = 139/170 (81.76%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRT 170
            MDL+S   N      ++P S + +T          P+SSRYENQKRRDWNTFCQYLRNHRPPLSL  CSGAHVLEFL YLDQFGKTKVH+  C FFG+PNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGG PE NPFGSR+VR++LR+VRDFQAKARGVSYEKKRKR 
Sbjct:    1 MDLISHQPN------KNPNSSTQLT---------PPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKARGVSYEKKRKRV 155

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M836|LSH2_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2 OS=Arabidopsis thaliana OX=3702 GN=LSH2 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.185e-78
Identity = 128/173 (73.99%), Postives = 147/173 (84.97%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPK 173
            MDL+S++ N+      +P +  S++  + +S  S P+SSRYENQKRRDWNTFCQYLRNH PPLSLA CSGAHVL+FL YLDQFGKTKVH+  C FFG+PNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGG PET+PFGSRSVRI+LR+VRDFQAK+RGVSYEKKRKR   K
Sbjct:    1 MDLISQNHNN-----RNPNT--SLSTQTPSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSRGVSYEKKRKRVNNK 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LMK2|LSH6_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.271e-77
Identity = 109/166 (65.66%), Postives = 133/166 (80.12%), Query Frame = 0

Query:   15 IESPTSGSSITNNSNTSG---CSTP--TSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKIT 175
            +ES  SG S     +  G    S+P  T SRYE+QKRRDWNTF QYL+NH+PPL+L+ CSGAHV+EFL YLDQFGKTKVH   CP+FG   PP+PC CPL+QAWGSLDAL+GRLRAAYEENGGRP++NPF +R+VRIYLR+VR+ QAKARG+ YEKK+++  P +T
Sbjct:    1 MESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKRPPTVT 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FGH2|LSH5_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arabidopsis thaliana OX=3702 GN=LSH5 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.539e-72
Identity = 97/132 (73.48%), Postives = 116/132 (87.88%), Query Frame = 0

Query:   39 SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEE-NGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKR 169
            SRYE+QKRRDWNTF QYLRNH+PPL+L+ CSGAHVLEFL YLDQFGKTKVH   CPFFG PNPP+ C CPL+QAWGSLDAL+GRLRAA+EE  GG PE+NPF +++VRIYL++VR  QAKARG+ Y+KK+++
Sbjct:   18 SRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKARGIPYDKKKRK 149

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q0E3M2|G1L1_ORYSJ (Protein G1-like1 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 7.282e-72
Identity = 109/139 (78.42%), Postives = 124/139 (89.21%), Query Frame = 0

Query:   31 SGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKR 169
             G  T   SRYE+QKRRDW TF QYLRNHRPPL L+ CSGAHVLEFL YLDQFGKTKVH H CPFFG P+PPAPCPCPLRQAWGSLDALVGRLRAA+EE+GGRPE+NPFG+R+VR+YLRD+RD Q+KARG++YEKKR++
Sbjct:   14 GGGGTARPSRYESQKRRDWQTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAHGCPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPESNPFGARAVRLYLRDIRDTQSKARGIAYEKKRRK 152

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|B8AIK3|G1L1_ORYSI (Protein G1-like1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05993 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 7.282e-72
Identity = 109/139 (78.42%), Postives = 124/139 (89.21%), Query Frame = 0

Query:   31 SGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKR 169
             G  T   SRYE+QKRRDW TF QYLRNHRPPL L+ CSGAHVLEFL YLDQFGKTKVH H CPFFG P+PPAPCPCPLRQAWGSLDALVGRLRAA+EE+GGRPE+NPFG+R+VR+YLRD+RD Q+KARG++YEKKR++
Sbjct:   14 GGGGTARPSRYESQKRRDWQTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAHGCPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPESNPFGARAVRLYLRDIRDTQSKARGIAYEKKRRK 152

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LW68|LSH4_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.196e-71
Identity = 109/126 (86.51%), Postives = 117/126 (92.86%), Query Frame = 0

Query:   39 SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYE 164
            SRYENQKRRDWNTF QYLRNHRPPLSL+ CSGAHVLEFL YLDQFGKTKVH H CPFFG PNPPAPC CPLRQAWGSLDAL+GRLRAA+EENGG PETNPFG+R+VR+YLR+VRD QAKARG+SYE
Sbjct:   47 SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYE 172

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|O82268|LSH3_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LSH3 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.444e-71
Identity = 111/133 (83.46%), Postives = 123/133 (92.48%), Query Frame = 0

Query:   40 RYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKP 172
            RYENQKRRDWNTF QYLRNHRPPLSL+ CSGAHVLEFL YLDQFGKTKVH + C F+G PNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG+PETNPFG+R+VR+YLR+VRD Q+KARGVSYEKK KR +P
Sbjct:   54 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKK-KRKRP 185

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q0DZF3|G1L3_ORYSJ (Protein G1-like3 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L3 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.366e-69
Identity = 114/137 (83.21%), Postives = 122/137 (89.05%), Query Frame = 0

Query:   37 TSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPK 173
            T SRYE QKRRDWNTF QYLRNHRPPL LA CSGAHVLEFL YLDQFGKTKVH   CPFFG PNPPAPCPCPLRQAWGSLDALVGRLRAA+EENGGRPE+NPF  R+VR+YLR+VR+ QA+ARGVSYEKK KR KP+
Sbjct:   70 TPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKK-KRKKPQ 205

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Match: sp|B8AH02|G1L3_ORYSI (Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.366e-69
Identity = 114/137 (83.21%), Postives = 122/137 (89.05%), Query Frame = 0

Query:   37 TSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPK 173
            T SRYE QKRRDWNTF QYLRNHRPPL LA CSGAHVLEFL YLDQFGKTKVH   CPFFG PNPPAPCPCPLRQAWGSLDALVGRLRAA+EENGGRPE+NPF  R+VR+YLR+VR+ QA+ARGVSYEKK KR KP+
Sbjct:   70 TPSRYEAQKRRDWNTFGQYLRNHRPPLGLAQCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKK-KRKKPQ 205

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT5G28490.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr5:10454541-10455113 REVERSE LENGTH=190 | 201606)

HSP 1 Score: 234.572 bits (597), Expect = 2.964e-79
Identity = 126/170 (74.12%), Postives = 139/170 (81.76%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRT 170
            MDL+S   N      ++P S + +T          P+SSRYENQKRRDWNTFCQYLRNHRPPLSL  CSGAHVLEFL YLDQFGKTKVH+  C FFG+PNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGG PE NPFGSR+VR++LR+VRDFQAKARGVSYEKKRKR 
Sbjct:    1 MDLISHQPN------KNPNSSTQLT---------PPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKARGVSYEKKRKRV 155

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT3G04510.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr3:1215812-1216417 REVERSE LENGTH=201 | 201606)

HSP 1 Score: 234.187 bits (596), Expect = 6.327e-79
Identity = 128/173 (73.99%), Postives = 147/173 (84.97%), Query Frame = 0

Query:    1 MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPK 173
            MDL+S++ N+      +P +  S++  + +S  S P+SSRYENQKRRDWNTFCQYLRNH PPLSLA CSGAHVL+FL YLDQFGKTKVH+  C FFG+PNPPAPCPCPLRQAWGSLDAL+GRLRAAYEENGG PET+PFGSRSVRI+LR+VRDFQAK+RGVSYEKKRKR   K
Sbjct:    1 MDLISQNHNN-----RNPNT--SLSTQTPSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSRGVSYEKKRKRVNNK 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT1G07090.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr1:2174202-2174792 REVERSE LENGTH=196 | 201606)

HSP 1 Score: 232.261 bits (591), Expect = 2.324e-78
Identity = 109/166 (65.66%), Postives = 133/166 (80.12%), Query Frame = 0

Query:   15 IESPTSGSSITNNSNTSG---CSTP--TSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKPKIT 175
            +ES  SG S     +  G    S+P  T SRYE+QKRRDWNTF QYL+NH+PPL+L+ CSGAHV+EFL YLDQFGKTKVH   CP+FG   PP+PC CPL+QAWGSLDAL+GRLRAAYEENGGRP++NPF +R+VRIYLR+VR+ QAKARG+ YEKK+++  P +T
Sbjct:    1 MESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKRPPTVT 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT5G58500.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr5:23645535-23646083 REVERSE LENGTH=182 | 201606)

HSP 1 Score: 218.779 bits (556), Expect = 3.620e-73
Identity = 97/132 (73.48%), Postives = 116/132 (87.88%), Query Frame = 0

Query:   39 SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEE-NGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKR 169
            SRYE+QKRRDWNTF QYLRNH+PPL+L+ CSGAHVLEFL YLDQFGKTKVH   CPFFG PNPP+ C CPL+QAWGSLDAL+GRLRAA+EE  GG PE+NPF +++VRIYL++VR  QAKARG+ Y+KK+++
Sbjct:   18 SRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKARGIPYDKKKRK 149

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT3G23290.2 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr3:8326958-8328010 FORWARD LENGTH=195 | 201606)

HSP 1 Score: 217.238 bits (552), Expect = 2.247e-72
Identity = 109/126 (86.51%), Postives = 117/126 (92.86%), Query Frame = 0

Query:   39 SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYE 164
            SRYENQKRRDWNTF QYLRNHRPPLSL+ CSGAHVLEFL YLDQFGKTKVH H CPFFG PNPPAPC CPLRQAWGSLDAL+GRLRAA+EENGG PETNPFG+R+VR+YLR+VRD QAKARG+SYE
Sbjct:   47 SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYE 172

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT2G31160.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr2:13277903-13278562 FORWARD LENGTH=219 | 201606)

HSP 1 Score: 217.624 bits (553), Expect = 3.523e-72
Identity = 111/133 (83.46%), Postives = 123/133 (92.48%), Query Frame = 0

Query:   40 RYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSYEKKRKRTKP 172
            RYENQKRRDWNTF QYLRNHRPPLSL+ CSGAHVLEFL YLDQFGKTKVH + C F+G PNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG+PETNPFG+R+VR+YLR+VRD Q+KARGVSYEKK KR +P
Sbjct:   54 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKK-KRKRP 185

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT2G42610.2 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr2:17748005-17748538 FORWARD LENGTH=177 | 201606)

HSP 1 Score: 204.912 bits (520), Expect = 9.735e-68
Identity = 97/143 (67.83%), Postives = 114/143 (79.72%), Query Frame = 0

Query:   21 GSSITNNSNTSGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSY 163
            G S+  +S +    TP  SRYE+QKRRDWNTF QYL+N RPP+ ++ CS  HVL+FL YLDQFGKTKVH   C F+G P PPAPC CPLRQAWGSLDAL+GRLRAAYEENGG PETNPF S ++R+YLR+VR+ QAKARG+ Y
Sbjct:    8 GKSLMESSGSEPPVTP--SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKARGIPY 148

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT2G42610.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr2:17748005-17748538 FORWARD LENGTH=177 | 201606)

HSP 1 Score: 204.912 bits (520), Expect = 9.735e-68
Identity = 97/143 (67.83%), Postives = 114/143 (79.72%), Query Frame = 0

Query:   21 GSSITNNSNTSGCSTPTSSRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSY 163
            G S+  +S +    TP  SRYE+QKRRDWNTF QYL+N RPP+ ++ CS  HVL+FL YLDQFGKTKVH   C F+G P PPAPC CPLRQAWGSLDAL+GRLRAAYEENGG PETNPF S ++R+YLR+VR+ QAKARG+ Y
Sbjct:    8 GKSLMESSGSEPPVTP--SRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKARGIPY 148

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT1G78815.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr1:29632054-29632641 REVERSE LENGTH=195 | 201606)

HSP 1 Score: 198.749 bits (504), Expect = 4.734e-65
Identity = 86/125 (68.80%), Postives = 100/125 (80.00%), Query Frame = 0

Query:   39 SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKARGVSY 163
            SRYE+QKRRDWNTFCQYLRN +PP+ ++ C   H+L+FL YLDQFGKTKVH H C FFG   P   C CPL+QAWGSLDAL+GRLRAA+EENGG PE NPF    +R++LR+VRD QAKARGV Y
Sbjct:   39 SRYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQVEPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKARGVPY 163

[Close]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Match: AT4G18610.1 (| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) | Chr4:10250794-10251369 FORWARD LENGTH=191 | 201606)

HSP 1 Score: 190.66 bits (483), Expect = 5.814e-62
Identity = 85/126 (67.46%), Postives = 103/126 (81.75%), Query Frame = 0

Query:   39 SRYENQKRRDWNTFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPNPPAPCPCPLRQAWGSLDALVGRLRAAYEEN-GGRPETNPFGSRSVRIYLRDVRDFQAKARGVSY 163
            SRYE+QKRRDWNTF QYL++  PPL ++     HVL FL YLDQFGKTKVH+  C FFG P+PP PC CPL+QAWGSLDAL+GRLRAAYEE+ GG P+TNPF + S+R++LR+VR+ QAKARG+ Y
Sbjct:   36 SRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQAKARGIPY 161

The following BLAST results are available for this feature:

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A438J9L1\|A0A438J9L1_VITVI	1.094e-92	72.19	Protein light-dependent short hypocotyls 1 OS=Viti...	[more]
tr\|F6H618\|F6H618_VITVI	1.293e-92	72.19	ALOG domain-containing protein OS=Vitis vinifera O...	[more]
tr\|A0A2Z6LRJ9\|A0A2Z6LRJ9_TRISU	6.611e-90	84.86	ALOG domain-containing protein OS=Trifolium subter...	[more]
tr\|A0A2K3KJD1\|A0A2K3KJD1_TRIPR	2.666e-89	86.05	ALOG domain-containing protein (Fragment) OS=Trifo...	[more]
tr\|V7BGL2\|V7BGL2_PHAVU	4.897e-88	80.43	ALOG domain-containing protein OS=Phaseolus vulgar...	[more]
tr\|G7I6S2\|G7I6S2_MEDTR	6.859e-87	85.25	Light-dependent short hypocotyls protein OS=Medica...	[more]
tr\|A0A3Q7GP48\|A0A3Q7GP48_SOLLC	1.838e-86	70.76	ALOG domain-containing protein OS=Solanum lycopers...	[more]
tr\|A0A6A2XR18\|A0A6A2XR18_HIBSY	2.044e-86	70.00	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Hibi...	[more]
tr\|A0A1U7V605\|A0A1U7V605_NICSY	2.913e-86	72.51	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like OS...	[more]
tr\|A0A6N2BBZ0\|A0A6N2BBZ0_SOLCI	5.161e-86	69.71	ALOG domain-containing protein OS=Solanum chilense...	[more]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
sp\|Q6NNI3\|LSH1_ARATH	2.897e-78	74.12	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 OS=Arab...	[more]
sp\|Q9M836\|LSH2_ARATH	6.185e-78	73.99	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2 OS=Arab...	[more]
sp\|Q9LMK2\|LSH6_ARATH	2.271e-77	65.66	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arab...	[more]
sp\|Q9FGH2\|LSH5_ARATH	3.539e-72	73.48	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arab...	[more]
sp\|Q0E3M2\|G1L1_ORYSJ	7.282e-72	78.42	Protein G1-like1 OS=Oryza sativa subsp. japonica O...	[more]
sp\|B8AIK3\|G1L1_ORYSI	7.282e-72	78.42	Protein G1-like1 OS=Oryza sativa subsp. indica OX=...	[more]
sp\|Q9LW68\|LSH4_ARATH	2.196e-71	86.51	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arab...	[more]
sp\|O82268\|LSH3_ARATH	3.444e-71	83.46	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arab...	[more]
sp\|Q0DZF3\|G1L3_ORYSJ	1.366e-69	83.21	Protein G1-like3 OS=Oryza sativa subsp. japonica O...	[more]
sp\|B8AH02\|G1L3_ORYSI	1.366e-69	83.21	Protein G1-like3 OS=Oryza sativa subsp. indica OX=...	[more]

BLAST of Vfaba.Tiffany.R1.3g067000.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G28490.1	2.964e-79	74.12	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT3G04510.1	6.327e-79	73.99	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT1G07090.1	2.324e-78	65.66	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT5G58500.1	3.620e-73	73.48	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT3G23290.2	2.247e-72	86.51	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT2G31160.1	3.523e-72	83.46	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT2G42610.2	9.735e-68	67.83	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT2G42610.1	9.735e-68	67.83	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT1G78815.1	4.734e-65	68.80	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]
AT4G18610.1	5.814e-62	67.46	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (D...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	ALOG_dom	coord: 34..153 e-value: 8.0E-65 score: 216.7
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 40..167 score: 82.57843
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..181
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 22..171

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:468359638..468360183+

mRNA sequence

>Vfaba.Tiffany.R1.3g067000.1_tif_v1 ID=Vfaba.Tiffany.R1.3g067000.1_tif_v1; Name=Vfaba.Tiffany.R1.3g067000.1; organism=Vicia faba; type=mRNA; length=546bp
ATGGATTTGGTTTCAGAATCTACGAACTCGACCTTAAGTAAGATCGAGAG
TCCCACAAGTGGATCCTCGATAACCAACAATAGTAATACCAGTGGATGTT
CAACTCCAACTTCAAGCCGTTACGAAAACCAAAAGAGAAGAGACTGGAAC
ACGTTTTGCCAGTATCTCCGAAACCACCGTCCACCACTCTCACTAGCCCT
ATGTAGCGGTGCTCATGTTCTTGAGTTTCTCAACTACCTTGACCAGTTTG
GGAAAACAAAAGTTCATAACCATCCTTGTCCTTTCTTTGGAATCCCTAAC
CCACCTGCTCCTTGTCCTTGTCCTCTTCGTCAGGCGTGGGGAAGTCTCGA
CGCTCTCGTCGGTCGCCTCCGTGCTGCTTATGAAGAGAACGGTGGTCGGC
CTGAGACTAACCCTTTTGGTTCTCGGTCTGTTAGGATTTATTTAAGGGAT
GTTCGTGATTTTCAAGCGAAAGCTAGAGGTGTTAGCTATGAAAAGAAGAG
GAAGAGGACTAAACCTAAGATCACTGCACCCACAACTGCTAGTTAG

protein sequence of Vfaba.Tiffany.R1.3g067000.1_tif_v1

>Vfaba.Tiffany.R1.3g067000.1_tif_v1 ID=Vfaba.Tiffany.R1.3g067000.1_tif_v1; Name=Vfaba.Tiffany.R1.3g067000.1_tif_v1; organism=Vicia faba; type=polypeptide; length=181bp
MDLVSESTNSTLSKIESPTSGSSITNNSNTSGCSTPTSSRYENQKRRDWN
TFCQYLRNHRPPLSLALCSGAHVLEFLNYLDQFGKTKVHNHPCPFFGIPN
PPAPCPCPLRQAWGSLDALVGRLRAAYEENGGRPETNPFGSRSVRIYLRD
VRDFQAKARGVSYEKKRKRTKPKITAPTTAS

mRNA from alignment at chr3:468359638..468360183+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Tiffany.R1.3g067000.1_tif_v1 ID=Vfaba.Tiffany.R1.3g067000.1_tif_v1; Name=Vfaba.Tiffany.R1.3g067000.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:468359638..468360183+ (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006936	ALOG_dom
IPR040222	ALOG

Search form

Vfaba.Tiffany.R1.3g067000.1