Vfaba.Tiffany.R1.3g097760.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QSF5|A0A4P1QSF5_LUPAN (Eukaryotic translation initiation factor 3 subunit G OS=Lupinus angustifolius OX=3871 GN=TanjilG_05618 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.585e-30 Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0 Query: 7 ASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 A+K+RWGELEE GEDLD LLP QVI PD+NG K EY+FD++G VK TTIT TRKLANA +SK AI + KFGD VHED+ S L Sbjct: 2 AAKLRWGELEEDDGEDLDFLLPPKQVIGPDDNGIKKIIEYKFDDEGNKVKVTTITRTRKLANARLSKRAIQRRSWPKFGDAVHEDVGSRLT 92
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A438F9S4|A0A438F9S4_VITVI (eIF3g domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_075092 PE=4 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.209e-30 Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 0 Query: 3 YSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 + + SK+RWGELEE GEDLD LLP QVI PD+NG K EY+F++DG VK TT T RKLA A +SK AI + KFGD VHED+ S L Sbjct: 9 WGSTQSKLRWGELEEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLAKARLSKRAIERRSWAKFGDAVHEDVGSRLT 103
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|V7BYF2|V7BYF2_PHAVU (Eukaryotic translation initiation factor 3 subunit G OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G012400g PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.113e-30 Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 0 Query: 1 MVYSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 MV+ + +K+RWGELEE GEDLD LLP QV+ PD+NG K EY+FD+DG VK TT + TRKLANA +SK A+ + KFGD VHED+ S L Sbjct: 4 MVHHREPAKLRWGELEEDDGEDLDFLLPPRQVVGPDDNGIKRVIEYKFDDDGNKVKITTTSRTRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLT 100
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2I4FFZ1|A0A2I4FFZ1_JUGRE (Eukaryotic translation initiation factor 3 subunit G OS=Juglans regia OX=51240 GN=LOC108998481 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.871e-29 Identity = 56/94 (59.57%), Postives = 65/94 (69.15%), Query Frame = 0 Query: 4 SNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 S + +K+RWGELEE GEDLD LLP QVI PDENG K EY F++DG VK TT + TRKLANA +SK AI + KFGD VHED+ S L Sbjct: 3 SAQQTKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYRFNDDGNKVKITTTSRTRKLANARLSKRAIERRSWPKFGDAVHEDVGSRLT 96
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A540MNT0|A0A540MNT0_MALBA (Eukaryotic translation initiation factor 3 subunit G OS=Malus baccata OX=106549 GN=C1H46_013966 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 6.862e-29 Identity = 54/94 (57.45%), Postives = 63/94 (67.02%), Query Frame = 0 Query: 4 SNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 N+ K+RWGELEE GEDLD LLP Q I PDENG K EY+F+EDG VK TT T RKLANA +SK A+ + KFGD VHED+ + L Sbjct: 9 GNQPPKLRWGELEEDDGEDLDFLLPPIQEIGPDENGIKTVIEYKFNEDGNKVKMTTTTRIRKLANARLSKRAVERRSWPKFGDAVHEDVGARLT 102
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YEJ7|A0A1S2YEJ7_CICAR (Eukaryotic translation initiation factor 3 subunit G OS=Cicer arietinum OX=3827 GN=LOC101496121 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 9.185e-29 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 0 Query: 1 MVYSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 MV + +K+RWGELEE GEDLD LLP QVI PD NG K +Y+FD+DG VK TTIT TRKLA+A ++K A++ + KFGD V ED+ S L Sbjct: 1 MVVQVEPAKLRWGELEEDDGEDLDFLLPPIQVIGPDHNGIKSVIQYKFDDDGNKVKITTITRTRKLAHARLTKRAVDRRSWPKFGDAVQEDVGSRLT 97
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|V7C6C6|V7C6C6_PHAVU (Eukaryotic translation initiation factor 3 subunit G OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G054600g PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 9.689e-29 Identity = 54/97 (55.67%), Postives = 65/97 (67.01%), Query Frame = 0 Query: 1 MVYSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 M + + +K+RWGELEE EDLD LLP QVI PD+NG K EY+FDEDG VK T T TRKLANA +SK A+ + KFGD VHED+ + L Sbjct: 1 MAHQGEPTKLRWGELEEDDAEDLDFLLPPRQVIGPDDNGIKKVIEYKFDEDGNKVKIITTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLT 97
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J6GY94|A0A7J6GY94_CANSA (Eukaryotic translation initiation factor 3 subunit G OS=Cannabis sativa OX=3483 GN=F8388_005543 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.219e-28 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0 Query: 6 KASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 + +K+RWGELEE GEDLD LLP QVI PDENG K EY+F+++G VK TTIT TRKLANA +SK A+ + KFGD V ED+ S L Sbjct: 8 QPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVVEYKFNDEGNKVKITTITRTRKLANARLSKRAVERRSWPKFGDAVQEDVGSRLT 99
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7QJB0|A0A5A7QJB0_STRAF (Eukaryotic translation initiation factor 3subunit G (Fragment) OS=Striga asiatica OX=4170 GN=STAS_21877 PE=4 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.585e-28 Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 0 Query: 6 KASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 + SK+RWGELEE GEDLD LLP QVI PDENG K EY+F+++G VK TT T RKLANA +SK AI + KFGD VHED+ S L Sbjct: 8 QPSKMRWGELEEDDGEDLDFLLPPKQVIGPDENGIKKVVEYKFNDEGNKVKITTTTRVRKLANARLSKRAIERRSWPKFGDAVHEDVGSRLT 99
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2G9G279|A0A2G9G279_9LAMI (Eukaryotic translation initiation factor 3 subunit G OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28079 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.704e-28 Identity = 54/94 (57.45%), Postives = 65/94 (69.15%), Query Frame = 0 Query: 4 SNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 + + SK+RWGELEE GEDLD LLP QVI PDENG K EY+F+++G VK TT T RKLANA +SK A+ + KFGD VHED+ S L Sbjct: 6 ATQPSKLRWGELEEDDGEDLDFLLPPKQVIGPDENGIKKVVEYKFNDEGNKVKITTTTRIRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLT 99
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Match: AT3G11400.1 (| eukaryotic translation initiation factor 3G1 | Chr3:3578536-3580366 FORWARD LENGTH=294 | 201606) HSP 1 Score: 93.9745 bits (232), Expect = 3.262e-24 Identity = 48/93 (51.61%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 5 NKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97 K SK RWGE++E EDLD LLP QVI PDENG K EY+F+++ VK TT T RKLA+A ++K A+ N KFGD +E+ SHL Sbjct: 7 QKTSKFRWGEMDED--EDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLT 97
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Match: AT3G11400.2 (| eukaryotic translation initiation factor 3G1 | Chr3:3578536-3580366 FORWARD LENGTH=321 | 201606) HSP 1 Score: 93.2041 bits (230), Expect = 8.513e-24 Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 0 Query: 5 NKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHL 96 K SK RWGE++E EDLD LLP QVI PDENG K EY+F+++ VK TT T RKLA+A ++K A+ N KFGD +E+ SHL Sbjct: 7 QKTSKFRWGEMDED--EDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHL 96
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Match: AT5G06000.1 (| eukaryotic translation initiation factor 3G2 | Chr5:1808169-1809742 FORWARD LENGTH=308 | 201606) HSP 1 Score: 82.8037 bits (203), Expect = 4.840e-20 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 0 Query: 5 NKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHL 96 K K+RWGE++E +G D D LLP Q+I PD+NG K EY+F+E+ K VK TT T +K A ++K A+ + KFGD HE+ SS+L Sbjct: 7 QKTKKLRWGEIDEEEG-DYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQKRA---LTKQAVERRSWNKFGDAAHEESSSYL 94 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.3g097760.1_tif_v1 ID=Vfaba.Tiffany.R1.3g097760.1_tif_v1; Name=Vfaba.Tiffany.R1.3g097760.1; organism=Vicia faba; type=mRNA; length=339bpback to top protein sequence of Vfaba.Tiffany.R1.3g097760.1_tif_v1 >Vfaba.Tiffany.R1.3g097760.1_tif_v1 ID=Vfaba.Tiffany.R1.3g097760.1_tif_v1; Name=Vfaba.Tiffany.R1.3g097760.1_tif_v1; organism=Vicia faba; type=polypeptide; length=112bpback to top mRNA from alignment at chr3:722135911..722136249- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.3g097760.1_tif_v1 ID=Vfaba.Tiffany.R1.3g097760.1_tif_v1; Name=Vfaba.Tiffany.R1.3g097760.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:722135911..722136249- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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