Vfaba.Tiffany.R1.3g097760.1

Transcript Overview
NameVfaba.Tiffany.R1.3g097760.1
Unique NameVfaba.Tiffany.R1.3g097760.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length339
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:722135911..722136249 -Vicia faba cv. Tiffany genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g097760Vfaba.Tiffany.R1.3g097760_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g097760.1_tif_v1-exonVfaba.Tiffany.R1.3g097760.1_tif_v1-exon-chr3_tif_v1:722135911..722136249Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g097760.1_tif_v1-cdsVfaba.Tiffany.R1.3g097760.1_tif_v1-cds-chr3_tif_v1:722135911..722136249Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g097760.1_tif_v1Vfaba.Tiffany.R1.3g097760.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.3g097760.1_tif_v1Vfaba.Tiffany.R1.3g097760.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1QSF5|A0A4P1QSF5_LUPAN (Eukaryotic translation initiation factor 3 subunit G OS=Lupinus angustifolius OX=3871 GN=TanjilG_05618 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.585e-30
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    7 ASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            A+K+RWGELEE  GEDLD LLP  QVI PD+NG K   EY+FD++G  VK TTIT TRKLANA +SK AI   +  KFGD VHED+ S L 
Sbjct:    2 AAKLRWGELEEDDGEDLDFLLPPKQVIGPDDNGIKKIIEYKFDDEGNKVKVTTITRTRKLANARLSKRAIQRRSWPKFGDAVHEDVGSRLT 92          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A438F9S4|A0A438F9S4_VITVI (eIF3g domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_075092 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.209e-30
Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    3 YSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            + +  SK+RWGELEE  GEDLD LLP  QVI PD+NG K   EY+F++DG  VK TT T  RKLA A +SK AI   +  KFGD VHED+ S L 
Sbjct:    9 WGSTQSKLRWGELEEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLAKARLSKRAIERRSWAKFGDAVHEDVGSRLT 103          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|V7BYF2|V7BYF2_PHAVU (Eukaryotic translation initiation factor 3 subunit G OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G012400g PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.113e-30
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    1 MVYSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            MV+  + +K+RWGELEE  GEDLD LLP  QV+ PD+NG K   EY+FD+DG  VK TT + TRKLANA +SK A+   +  KFGD VHED+ S L 
Sbjct:    4 MVHHREPAKLRWGELEEDDGEDLDFLLPPRQVVGPDDNGIKRVIEYKFDDDGNKVKITTTSRTRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLT 100          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2I4FFZ1|A0A2I4FFZ1_JUGRE (Eukaryotic translation initiation factor 3 subunit G OS=Juglans regia OX=51240 GN=LOC108998481 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.871e-29
Identity = 56/94 (59.57%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    4 SNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            S + +K+RWGELEE  GEDLD LLP  QVI PDENG K   EY F++DG  VK TT + TRKLANA +SK AI   +  KFGD VHED+ S L 
Sbjct:    3 SAQQTKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVIEYRFNDDGNKVKITTTSRTRKLANARLSKRAIERRSWPKFGDAVHEDVGSRLT 96          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A540MNT0|A0A540MNT0_MALBA (Eukaryotic translation initiation factor 3 subunit G OS=Malus baccata OX=106549 GN=C1H46_013966 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.862e-29
Identity = 54/94 (57.45%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    4 SNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
             N+  K+RWGELEE  GEDLD LLP  Q I PDENG K   EY+F+EDG  VK TT T  RKLANA +SK A+   +  KFGD VHED+ + L 
Sbjct:    9 GNQPPKLRWGELEEDDGEDLDFLLPPIQEIGPDENGIKTVIEYKFNEDGNKVKMTTTTRIRKLANARLSKRAVERRSWPKFGDAVHEDVGARLT 102          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YEJ7|A0A1S2YEJ7_CICAR (Eukaryotic translation initiation factor 3 subunit G OS=Cicer arietinum OX=3827 GN=LOC101496121 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 9.185e-29
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    1 MVYSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            MV   + +K+RWGELEE  GEDLD LLP  QVI PD NG K   +Y+FD+DG  VK TTIT TRKLA+A ++K A++  +  KFGD V ED+ S L 
Sbjct:    1 MVVQVEPAKLRWGELEEDDGEDLDFLLPPIQVIGPDHNGIKSVIQYKFDDDGNKVKITTITRTRKLAHARLTKRAVDRRSWPKFGDAVQEDVGSRLT 97          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|V7C6C6|V7C6C6_PHAVU (Eukaryotic translation initiation factor 3 subunit G OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G054600g PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 9.689e-29
Identity = 54/97 (55.67%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    1 MVYSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            M +  + +K+RWGELEE   EDLD LLP  QVI PD+NG K   EY+FDEDG  VK  T T TRKLANA +SK A+   +  KFGD VHED+ + L 
Sbjct:    1 MAHQGEPTKLRWGELEEDDAEDLDFLLPPRQVIGPDDNGIKKVIEYKFDEDGNKVKIITTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLT 97          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J6GY94|A0A7J6GY94_CANSA (Eukaryotic translation initiation factor 3 subunit G OS=Cannabis sativa OX=3483 GN=F8388_005543 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.219e-28
Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    6 KASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            + +K+RWGELEE  GEDLD LLP  QVI PDENG K   EY+F+++G  VK TTIT TRKLANA +SK A+   +  KFGD V ED+ S L 
Sbjct:    8 QPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKKVVEYKFNDEGNKVKITTITRTRKLANARLSKRAVERRSWPKFGDAVQEDVGSRLT 99          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5A7QJB0|A0A5A7QJB0_STRAF (Eukaryotic translation initiation factor 3subunit G (Fragment) OS=Striga asiatica OX=4170 GN=STAS_21877 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.585e-28
Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 0
Query:    6 KASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            + SK+RWGELEE  GEDLD LLP  QVI PDENG K   EY+F+++G  VK TT T  RKLANA +SK AI   +  KFGD VHED+ S L 
Sbjct:    8 QPSKMRWGELEEDDGEDLDFLLPPKQVIGPDENGIKKVVEYKFNDEGNKVKITTTTRVRKLANARLSKRAIERRSWPKFGDAVHEDVGSRLT 99          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2G9G279|A0A2G9G279_9LAMI (Eukaryotic translation initiation factor 3 subunit G OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28079 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.704e-28
Identity = 54/94 (57.45%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    4 SNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
            + + SK+RWGELEE  GEDLD LLP  QVI PDENG K   EY+F+++G  VK TT T  RKLANA +SK A+   +  KFGD VHED+ S L 
Sbjct:    6 ATQPSKLRWGELEEDDGEDLDFLLPPKQVIGPDENGIKKVVEYKFNDEGNKVKITTTTRIRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLT 99          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Match: AT3G11400.1 (| eukaryotic translation initiation factor 3G1 | Chr3:3578536-3580366 FORWARD LENGTH=294 | 201606)

HSP 1 Score: 93.9745 bits (232), Expect = 3.262e-24
Identity = 48/93 (51.61%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    5 NKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLC 97
             K SK RWGE++E   EDLD LLP  QVI PDENG K   EY+F+++   VK TT T  RKLA+A ++K A+   N  KFGD  +E+  SHL 
Sbjct:    7 QKTSKFRWGEMDED--EDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLT 97          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Match: AT3G11400.2 (| eukaryotic translation initiation factor 3G1 | Chr3:3578536-3580366 FORWARD LENGTH=321 | 201606)

HSP 1 Score: 93.2041 bits (230), Expect = 8.513e-24
Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    5 NKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHL 96
             K SK RWGE++E   EDLD LLP  QVI PDENG K   EY+F+++   VK TT T  RKLA+A ++K A+   N  KFGD  +E+  SHL
Sbjct:    7 QKTSKFRWGEMDED--EDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHL 96          
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Match: AT5G06000.1 (| eukaryotic translation initiation factor 3G2 | Chr5:1808169-1809742 FORWARD LENGTH=308 | 201606)

HSP 1 Score: 82.8037 bits (203), Expect = 4.840e-20
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    5 NKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDEDGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHL 96
             K  K+RWGE++E +G D D LLP  Q+I PD+NG K   EY+F+E+ K VK TT T  +K A   ++K A+   +  KFGD  HE+ SS+L
Sbjct:    7 QKTKKLRWGEIDEEEG-DYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQKRA---LTKQAVERRSWNKFGDAAHEESSSYL 94          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4P1QSF5|A0A4P1QSF5_LUPAN1.585e-3062.64Eukaryotic translation initiation factor 3 subunit... [more]
tr|A0A438F9S4|A0A438F9S4_VITVI5.209e-3056.84eIF3g domain-containing protein OS=Vitis vinifera ... [more]
tr|V7BYF2|V7BYF2_PHAVU8.113e-3056.70Eukaryotic translation initiation factor 3 subunit... [more]
tr|A0A2I4FFZ1|A0A2I4FFZ1_JUGRE2.871e-2959.57Eukaryotic translation initiation factor 3 subunit... [more]
tr|A0A540MNT0|A0A540MNT0_MALBA6.862e-2957.45Eukaryotic translation initiation factor 3 subunit... [more]
tr|A0A1S2YEJ7|A0A1S2YEJ7_CICAR9.185e-2955.67Eukaryotic translation initiation factor 3 subunit... [more]
tr|V7C6C6|V7C6C6_PHAVU9.689e-2955.67Eukaryotic translation initiation factor 3 subunit... [more]
tr|A0A7J6GY94|A0A7J6GY94_CANSA1.219e-2858.70Eukaryotic translation initiation factor 3 subunit... [more]
tr|A0A5A7QJB0|A0A5A7QJB0_STRAF1.585e-2859.78Eukaryotic translation initiation factor 3subunit ... [more]
tr|A0A2G9G279|A0A2G9G279_9LAMI1.704e-2857.45Eukaryotic translation initiation factor 3 subunit... [more]
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BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Tiffany.R1.3g097760.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G11400.13.262e-2451.61| eukaryotic translation initiation factor 3G1 | C... [more]
AT3G11400.28.513e-2452.17| eukaryotic translation initiation factor 3G1 | C... [more]
AT5G06000.14.840e-2046.74| eukaryotic translation initiation factor 3G2 | C... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 32..106
e-value: 5.3E-8
score: 33.3

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.3g097760.1_tif_v1 ID=Vfaba.Tiffany.R1.3g097760.1_tif_v1; Name=Vfaba.Tiffany.R1.3g097760.1; organism=Vicia faba; type=mRNA; length=339bp
ATGGTGTATTCAAACAAAGCGTCGAAGATAAGGTGGGGAGAATTGGAAGA
ACACAAAGGCGAGGATCTTGATCTCCTGTTACCAGCGTGTCAGGTTATAA
GACCTGATGAAAATGGAACCAAGATAGCTAATGAGTACGAATTCGATGAA
GATGGTAAGATGGTTAAAAGTACAACAATTACTCACACGAGAAAACTCGC
CAATGCGAGTATGAGTAAACACGCCATCAATTGTCATAACTTGCTTAAGT
TTGGAGATATGGTTCATGAAGATATTAGTAGTCACCTTTGTCGTAACGCG
CCATCTGAAAACAGGACCATACCATCCTTCTGCGAGTAG
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protein sequence of Vfaba.Tiffany.R1.3g097760.1_tif_v1

>Vfaba.Tiffany.R1.3g097760.1_tif_v1 ID=Vfaba.Tiffany.R1.3g097760.1_tif_v1; Name=Vfaba.Tiffany.R1.3g097760.1_tif_v1; organism=Vicia faba; type=polypeptide; length=112bp
MVYSNKASKIRWGELEEHKGEDLDLLLPACQVIRPDENGTKIANEYEFDE
DGKMVKSTTITHTRKLANASMSKHAINCHNLLKFGDMVHEDISSHLCRNA
PSENRTIPSFCE
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mRNA from alignment at chr3:722135911..722136249-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.3g097760.1_tif_v1 ID=Vfaba.Tiffany.R1.3g097760.1_tif_v1; Name=Vfaba.Tiffany.R1.3g097760.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:722135911..722136249- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR024675eIF3g_N