Vfaba.Tiffany.R1.3g116000.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y098|A0A1S2Y098_CICAR (uncharacterized protein LOC101514677 OS=Cicer arietinum OX=3827 GN=LOC101514677 PE=4 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 1.779e-113 Identity = 174/203 (85.71%), Postives = 183/203 (90.15%), Query Frame = 0 Query: 1 MILSSIGKRILIGVIISLLLVVVVQSSAAALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHDLQNVDGGDSGRGMGGRLVLVQ 203 MIL SI K +I LL+++VVQSS A LNGN+MK+HP PRKRNITIQFGTNG N ASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE DCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLE+DMWRFRLPDSTMPELASAVFVDGELIVTVPK GHDLQNV+GGDS R MGGRLVLVQ Sbjct: 1 MILCSIEKE----TLILLLILLVVQSSVA-LNGNSMKVHPVPRKRNITIQFGTNGGNTASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTMPELASAVFVDGELIVTVPK--GHDLQNVEGGDSDRDMGGRLVLVQ 196
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396JUM2|A0A396JUM2_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0205281 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 7.291e-100 Identity = 163/204 (79.90%), Postives = 174/204 (85.29%), Query Frame = 0 Query: 1 MILSSIGKRILIGVIISLLLVVVVQSSAAALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHDLQNVD-GGDSGRGMGGRLVLVQ 203 MILSSI + L ++I L VVQSS A MKIHP PRKRNITIQFGT+ NP+SEAQ LLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE ADCFRFVAETEGIGEVR HTVEIHPGVTKIVVRDGESLELSLDQLE+DMWRFRLPDST+PELASAVFVDGELIVTVPK GH++QNV+ GG G G GGRLVLVQ Sbjct: 1 MILSSIQNQNLFVILILL----VVQSSVAL----KMKIHPVPRKRNITIQFGTDAGNPSSEAQTLLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAADCFRFVAETEGIGEVRAHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHEVQNVEGGGGMGGGGGGRLVLVQ 194
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6P050|A0A2Z6P050_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_46150 PE=4 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 2.176e-96 Identity = 140/151 (92.72%), Postives = 145/151 (96.03%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHDLQNV 186 MKIHP PRKRNITIQFGT+G NP+SEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVA+EEE DCFRFVAET+GIGEVRTHTVEIHPGV KIVVRDGESLELSLDQLEIDMWRFRLPDST+PELASAVFVDGELIVTVPK GHDLQNV Sbjct: 1 MKIHPVPRKRNITIQFGTDGGNPSSEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEEPDCFRFVAETDGIGEVRTHTVEIHPGVVKIVVRDGESLELSLDQLEIDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHDLQNV 149
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P4V5|A0A2K3P4V5_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g006896 PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.090e-95 Identity = 147/169 (86.98%), Postives = 155/169 (91.72%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHDLQNVD-GGDSGRGMGGRLVLVQ 203 MKIHP PRKRNITIQFGT+G NP+SEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE DCFRFVAET+GIGEVRTHTVEIHPGV KIVVRDGESLELSLDQLE+DMWRFRLPDST+PELASAVFVDGELIVTVPK GHDLQNV+ G + GGRLVLVQ Sbjct: 1 MKIHPVPRKRNITIQFGTDGGNPSSEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAPDCFRFVAETDGIGEVRTHTVEIHPGVVKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHDLQNVEGGDNGRGMGGGRLVLVQ 167
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151U6V2|A0A151U6V2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_007715 PE=4 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.994e-95 Identity = 136/165 (82.42%), Postives = 152/165 (92.12%), Query Frame = 0 Query: 15 IISLLLVVVVQSSAAALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGH 179 II +L++VVQSSAA++ GN MK+HP PRKRNI+IQFG +G NP SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADVA+EE ADCFRFVAET+GIG+VR HTVEIHPGVTKIVVR+G S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGH Sbjct: 8 IIIAVLILVVQSSAASVQGNIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVAVEEAADCFRFVAETDGIGDVRAHTVEIHPGVTKIVVREGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGH 172
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VPF4|A0A072VPF4_MEDTR (Heat shock 22 kDa protein OS=Medicago truncatula OX=3880 GN=25485194 PE=4 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 5.282e-95 Identity = 148/169 (87.57%), Postives = 156/169 (92.31%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHDLQNVD-GGDSGRGMGGRLVLVQ 203 MKIHP PRKRNITIQFGT+ NP+SEAQ LLGISGKKLRRLPHVFSRVLELPFRSDADVA+EE ADCFRFVAETEGIGEVR HTVEIHPGVTKIVVRDGESLELSLDQLE+DMWRFRLPDST+PELASAVFVDGELIVTVPK GH++QNV+ GG G G GGRLVLVQ Sbjct: 1 MKIHPVPRKRNITIQFGTDAGNPSSEAQTLLGISGKKLRRLPHVFSRVLELPFRSDADVAVEEAADCFRFVAETEGIGEVRAHTVEIHPGVTKIVVRDGESLELSLDQLELDMWRFRLPDSTLPELASAVFVDGELIVTVPK--GHEVQNVEGGGGMGGGGGGRLVLVQ 167
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A165D0X1|A0A165D0X1_PHAVU (Nodulin 22 OS=Phaseolus vulgaris OX=3885 GN=Nod22 PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 2.888e-94 Identity = 148/202 (73.27%), Postives = 168/202 (83.17%), Query Frame = 0 Query: 6 IGKRILIGVIISLLLVVVVQSSAA--ALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISG-KKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHDLQNVDGGDSGRGM-GGRLVLVQ 203 I K LI ++I +L++V+QSSAA + + MK+HP PRKRNI+IQFG +G NP SEAQALLGI+G KKLRRLPHVFS VLELPFRSDADV +EE+ DCFRFVAETEGIG+VR HT+EIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGHG + GD R M GGRLVLVQ Sbjct: 2 IQKVSLIFIVIIAVLILVLQSSAAFHSSKNSIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGSKKLRRLPHVFSCVLELPFRSDADVVVEEDPDCFRFVAETEGIGDVRAHTIEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHGE-----EDGDGDRVMGGGRLVLVQ 198
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|V7BCG9|V7BCG9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G058000g PE=4 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 3.966e-90 Identity = 141/183 (77.05%), Postives = 155/183 (84.70%), Query Frame = 0 Query: 25 QSSAA--ALNGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISG-KKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHDLQNVDGGDSGRGM-GGRLVLVQ 203 QSSAA + + MK+HP PRKRNI+IQFG +G NP SEAQALLGI+G KKLRRLPHVFS VLELPFRSDADV +EE+ DCFRFVAETEGIG+VR HT+EIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGHG + GD R M GGRLVLVQ Sbjct: 21 QSSAAFHSSKNSIMKVHPVPRKRNISIQFGVDGGNPMSEAQALLGIAGSKKLRRLPHVFSCVLELPFRSDADVVVEEDPDCFRFVAETEGIGDVRAHTIEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGHGE-----EDGDGDRVMGGGRLVLVQ 198
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445F543|A0A445F543_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_054139 PE=4 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 1.058e-89 Identity = 134/169 (79.29%), Postives = 150/169 (88.76%), Query Frame = 0 Query: 12 IGVIISLLLVVVVQSSAAALNGN-TMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGH 179 + ++I +L++VVQSSAA N MK+HP PRKRNI+IQFG +G NP SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADVA+EE DCFRFVAET+GIG+VR HTVEIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGH Sbjct: 5 VPLVIIAVLILVVQSSAAFHGINRIMKVHPVPRKRNISIQFGGDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVAVEEAPDCFRFVAETDGIGDVRAHTVEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGH 173
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Match: tr|I1NGG3|I1NGG3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100808440 PE=4 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 1.058e-89 Identity = 134/169 (79.29%), Postives = 150/169 (88.76%), Query Frame = 0 Query: 12 IGVIISLLLVVVVQSSAAALNGN-TMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGIGEVRTHTVEIHPGVTKIVVRDGESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGH 179 + ++I +L++VVQSSAA N MK+HP PRKRNI+IQFG +G NP SEAQALLGI+GKKLRRLPHVFS VLELPFRSDADVA+EE DCFRFVAET+GIG+VR HTVEIHPGVTKIVVRDG S+ELSLDQLE+DMWRFRLP+ST PELASAVFVDGELIVTVPKGH Sbjct: 5 VPLVIIAVLILVVQSSAAFHGINRIMKVHPVPRKRNISIQFGGDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLELPFRSDADVAVEEAPDCFRFVAETDGIGDVRAHTVEIHPGVTKIVVRDGGSVELSLDQLELDMWRFRLPESTRPELASAVFVDGELIVTVPKGH 173
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. Araport11
Match: AT3G22530.1 (| heat shock protein | Chr3:7977774-7978370 REVERSE LENGTH=198 | 201606) HSP 1 Score: 171.014 bits (432), Expect = 7.711e-54 Identity = 97/179 (54.19%), Postives = 116/179 (64.80%), Query Frame = 0 Query: 32 NGNTMKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETEGI----GEVRTHTVEIHPGVTKIVVRDG--ESLELSLDQLEIDMWRFRLPDSTMPELASAVFVDGELIVTVPKGHGHD-LQNVDGGDSGRGMGGRLVLVQ 203 N M++HP PR N T+ + NP E GK LRRLPH+F+RVLELP RS+ADVA+EE DCFRFVAET G+ GE+R + VEIHPG+TKIVVR SL LSLD+LE+D+WRFRLP+ST PEL + VDG+LIVTVPK + G GRLVLVQ Sbjct: 28 NPEAMRVHPIPRNINNTL-IHHHHHNPTREP-------GKNLRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGITKIVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPKNAEEEDDDGGGGDFGQGIGSGRLVLVQ 198
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. Araport11
Match: AT4G14830.1 (| 17.6 kDa class II heat shock protein | Chr4:8510983-8511441 FORWARD LENGTH=152 | 201606) HSP 1 Score: 157.532 bits (397), Expect = 3.565e-49 Identity = 93/155 (60.00%), Postives = 107/155 (69.03%), Query Frame = 0 Query: 36 MKIHPAPRKRNITIQFGTNGSNPASEAQALLGISGKKLRRLPHVFSRVLELPFRSDADVAIEEEADCFRFVAETE--GIGEVRTHTVEIHPGVTKIVVRDG--ESLELSLDQLEIDMWRFRLPDSTMPELASA-VFVDGELIVTVPK--GHGHDL 183 MKIHP PR N +N A+ GKKLRRLPH+FSRVLELP +SDADVA+EE DCFRFVAET+ G G VR + VEIHPGVTKI+VR SL LSLD+LE+D+WRFRLP+ST PEL + DGELIVTVPK +G DL Sbjct: 1 MKIHPLPR--------NENNNNLIHHARDPTREPGKKLRRLPHIFSRVLELPLKSDADVAVEESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKILVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVDCDGDGELIVTVPKIEDNGRDL 147 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.3g116000.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.3g116000.1_tif_v1 ID=Vfaba.Tiffany.R1.3g116000.1_tif_v1; Name=Vfaba.Tiffany.R1.3g116000.1; organism=Vicia faba; type=mRNA; length=612bpback to top protein sequence of Vfaba.Tiffany.R1.3g116000.1_tif_v1 >Vfaba.Tiffany.R1.3g116000.1_tif_v1 ID=Vfaba.Tiffany.R1.3g116000.1_tif_v1; Name=Vfaba.Tiffany.R1.3g116000.1_tif_v1; organism=Vicia faba; type=polypeptide; length=203bpback to top mRNA from alignment at chr3:900285022..900285633+ Legend: mRNAexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.3g116000.1_tif_v1 ID=Vfaba.Tiffany.R1.3g116000.1_tif_v1; Name=Vfaba.Tiffany.R1.3g116000.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:900285022..900285633+ (Vicia fababack to top |