Vfaba.Tiffany.R1.3g116200.1

Transcript Overview
NameVfaba.Tiffany.R1.3g116200.1
Unique NameVfaba.Tiffany.R1.3g116200.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length642
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr3chromosomechr3:901125172..901125813 -Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR280Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR294Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR311Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL373Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL416Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL210Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL290Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL304Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL687Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cctifL0083Cajanus cajan Asha genome v1.0Cajanus cajan
cctifL0348Cajanus cajan Asha genome v1.0Cajanus cajan
cctifL0586Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL362Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL381Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL875Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
tiftifL026Vicia faba cv. Tiffany genome v1.0Vicia faba
tiftifL177Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifL043Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL213Pisum sativum Cameor genome v1aPisum sativum
pstifL300Pisum sativum Cameor genome v1aPisum sativum
pvtifL263Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL575Pisum sativum Cameor genome v1aPisum sativum
pvtifL622Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvtifL634Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvfhR187Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhR220Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR354Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR362Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR396Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR414Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR227Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifL125Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL363Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL404Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0481Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL966Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0678Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0683Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0826Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0832Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0970Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL1131Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR318Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR348Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR397Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR315Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR360Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR346Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR389Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR419Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR424Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL173Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL231Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL247Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL619Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Cr_09040.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_07818Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014657679.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_01952Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004496662.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan02g119100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_022778955.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004493630.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004495136.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_24595Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun07g109100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.007G057800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.007G173000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg40891.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat06G0167700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr07.507Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cr_09550.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_29796.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
LR48_mrnaVigan02g225000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_04042Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_09048.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-KK1_035234Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_04584Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun07g239200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_10463.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_07393Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg32680.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.001G153000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg2013.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun01g135500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g064160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g053240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.3g145240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g116200Vfaba.Tiffany.R1.3g116200_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g116200.1_tif_v1-exonVfaba.Tiffany.R1.3g116200.1_tif_v1-exon-chr3_tif_v1:901125172..901125813Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g116200.1_tif_v1-cdsVfaba.Tiffany.R1.3g116200.1_tif_v1-cds-chr3_tif_v1:901125172..901125813Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.3g116200.1_tif_v1Vfaba.Tiffany.R1.3g116200.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.3g116200.1_tif_v1Vfaba.Tiffany.R1.3g116200.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NV46|A0A2Z6NV46_TRISU (Transcription repressor OS=Trifolium subterraneum OX=3900 GN=TSUD_46380 PE=4 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 1.401e-99
Identity = 155/186 (83.33%), Postives = 164/186 (88.17%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPS--PPYSFH-FNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLL 183
            MPSLFSKQLHLCFFKLK PTILSQP+ +  TT  PS  PPY+FH FNTT++HHHDE  EDYFSD+TTELPPPDFAS FASQR FFSSPGSS SITE+ESP N T P NSLIPKGG+VKRVPKYSVNPY DFL SMQEMIQSQQQVFDVTNDWDYLHELLLCYL LNP HTHKYIVQAFTHLLVD+L
Sbjct:    1 MPSLFSKQLHLCFFKLKYPTILSQPNPKHTTTTTPSQSPPYTFHHFNTTYSHHHDE-AEDYFSDDTTELPPPDFASAFASQRFFFSSPGSSKSITETESPLNNTQPCNSLIPKGGSVKRVPKYSVNPYDDFLCSMQEMIQSQQQVFDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHLLVDIL 185          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MQR5|A0A2K3MQR5_TRIPR (Transcription repressor OS=Trifolium pratense OX=57577 GN=L195_g016223 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.673e-97
Identity = 152/191 (79.58%), Postives = 162/191 (84.82%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNT-------TPPPSPPYSFH-FNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLL 183
            MPSLFSKQLHLCFFKLK PTILSQP+ Q  T       +P  SPPY+FH FNTT++HH DE  EDYF D+TTELPPPDFAS FASQR FFSSPGSS SITE+ESP N T P NSLIPKGG+VKRVPKYS+NPY DFL SMQEMIQSQQQVFDVTNDWDYLHELLLCYL LNP HTHKYIVQAFTHLLVD+L
Sbjct:    1 MPSLFSKQLHLCFFKLKYPTILSQPNPQHTTTTTTITTSPSQSPPYTFHHFNTTYSHHRDE-AEDYFYDDTTELPPPDFASAFASQRFFFSSPGSSKSITETESPFNNTQPCNSLIPKGGSVKRVPKYSINPYDDFLCSMQEMIQSQQQVFDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHLLVDIL 190          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y0V5|A0A1S2Y0V5_CICAR (Transcription repressor OS=Cicer arietinum OX=3827 GN=LOC101515654 PE=4 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.397e-90
Identity = 143/188 (76.06%), Postives = 152/188 (80.85%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLK----NPTILSQPHSQQNTTPPPSPPY-SFHFNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLL 183
            MP+LFSKQLHLCFFKLK            H    +TP   PPY +FHFNTTFTHH +   EDYFSD+TT LPPPDFASVFASQR FFSSPGSSNSI E+ES P+ TPP+NSLIPKGG VKRVPKYSVNPYVDFL SMQEMIQS Q V DVTNDWDYLHELLLCYL LNP HTHKYIV+AFTHLLVDLL
Sbjct:    1 MPTLFSKQLHLCFFKLKYLSQPQPQQHHHHHHHKSTPSQLPPYNTFHFNTTFTHH-NSVVEDYFSDDTTNLPPPDFASVFASQRFFFSSPGSSNSIIETESSPDTTPPYNSLIPKGGTVKRVPKYSVNPYVDFLCSMQEMIQSHQPVLDVTNDWDYLHELLLCYLALNPTHTHKYIVRAFTHLLVDLL 187          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072W0S4|A0A072W0S4_MEDTR (Transcription repressor OS=Medicago truncatula OX=3880 GN=MTR_1g103640 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.001e-85
Identity = 168/215 (78.14%), Postives = 176/215 (81.86%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHHHDEPEE-DYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYT-PPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSSSSSSSSSSFSSLPPRSPPSPNPNNRLR 213
            MP LFSKQLHLCFFKLK PTILSQPH Q  +TP  SPP  FHFNTTF+HHH+E EE DYF D TTELPPPDF+SVFASQR FFSSPGSSNSITES  P N T P +NSLIP+GG+VKRVPKYSVNPYVDFLRSMQEMIQSQQQV DVTNDWDYLHELLLCYL LNP HTHKYIVQAFTHLLVD+LSSSSS S SSS S        SP   N  R
Sbjct:    1 MPRLFSKQLHLCFFKLKYPTILSQPHPQHTSTP--SPPCPFHFNTTFSHHHEEEEEEDYFYD-TTELPPPDFSSVFASQRFFFSSPGSSNSITES--PSNDTLPCNNSLIPRGGSVKRVPKYSVNPYVDFLRSMQEMIQSQQQVVDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHLLVDILSSSSSLSFSSSSSPP------SPPKLNNQR 204          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396K274|A0A396K274_MEDTR (Transcription repressor OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0205341 PE=4 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.914e-85
Identity = 168/215 (78.14%), Postives = 176/215 (81.86%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHHHDEPEE-DYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYT-PPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSSSSSSSSSSFSSLPPRSPPSPNPNNRLR 213
            MP LFSKQLHLCFFKLK PTILSQPH Q  +TP  SPP  FHFNTTF+HHH+E EE DYF D TTELPPPDF+SVFASQR FFSSPGSSNSITES  P N T P +NSLIP+GG+VKRVPKYSVNPYVDFLRSMQEMIQSQQQV DVTNDWDYLHELLLCYL LNP HTHKYIVQAFTHLLVD+LSSSSS S SSS S        SP   N  R
Sbjct:    1 MPRLFSKQLHLCFFKLKYPTILSQPHPQHTSTP--SPPCPFHFNTTFSHHHEEEEEEDYFYD-TTELPPPDFSSVFASQRFFFSSPGSSNSITES--PSNDTLPCNNSLIPRGGSVKRVPKYSVNPYVDFLRSMQEMIQSQQQVVDVTNDWDYLHELLLCYLALNPTHTHKYIVQAFTHLLVDILSSSSSLSFSSSSSPP------SPPKLNNQR 204          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N5Z6|A0A4D6N5Z6_VIGUN (Transcription repressor OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g3361 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.993e-61
Identity = 115/186 (61.83%), Postives = 132/186 (70.97%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
            MP+LFSK+LHLCFFKLK PTIL  PH      PPPS   S    TTFTH     ++D     +TE   PDFASVFASQR FFSSPG+SNSI ES       P   + +P GG V  VPKYS+NPYVDFLRSM EMI+S+Q V D+T DWDYLHELLLCYL LNP HTHKYI++AFT L++ LLSS+
Sbjct:    1 MPTLFSKRLHLCFFKLKYPTILHHPH------PPPSTDNS----TTFTHPSSSSDDDDDRSSSTE---PDFASVFASQRFFFSSPGTSNSIVES-------PDTRTFVPTGGGVT-VPKYSLNPYVDFLRSMHEMIRSRQ-VLDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSST 164          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SMJ7|A0A0S3SMJ7_PHAAN (Transcription repressor OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G064600 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.480e-60
Identity = 113/186 (60.75%), Postives = 129/186 (69.35%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
            MP+LFSK+LHLCFFKLK PTIL  PH      PPPS   S    TTFTH    P      D+ +    PDFASVFASQR FFSSPG+SNSI ES       P   + +P GG V  VPKYS+NPYVDFLRSM EMI+S+Q   D+T DWDYLHELLLCYL LNP HTHKYI++AFT L++ LLSS+
Sbjct:    1 MPTLFSKRLHLCFFKLKYPTILHHPH------PPPSTDNS----TTFTH----PSSSSDDDDHSSSTEPDFASVFASQRFFFSSPGTSNSIVES-------PDTRTFVPTGGGVT-VPKYSLNPYVDFLRSMHEMIRSRQ--VDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSST 162          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TZY0|A0A0L9TZY0_PHAAN (Transcription repressor OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g225000 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.480e-60
Identity = 113/186 (60.75%), Postives = 129/186 (69.35%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
            MP+LFSK+LHLCFFKLK PTIL  PH      PPPS   S    TTFTH    P      D+ +    PDFASVFASQR FFSSPG+SNSI ES       P   + +P GG V  VPKYS+NPYVDFLRSM EMI+S+Q   D+T DWDYLHELLLCYL LNP HTHKYI++AFT L++ LLSS+
Sbjct:    1 MPTLFSKRLHLCFFKLKYPTILHHPH------PPPSTDNS----TTFTH----PSSSSDDDDHSSSTEPDFASVFASQRFFFSSPGTSNSIVES-------PDTRTFVPTGGGVT-VPKYSLNPYVDFLRSMHEMIRSRQ--VDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSST 162          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EL33|A0A3Q0EL33_VIGRR (Transcription repressor OS=Vigna radiata var. radiata OX=3916 GN=LOC106780189 PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 4.989e-60
Identity = 113/186 (60.75%), Postives = 129/186 (69.35%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
            MP+LFSK+LHLCFFKLK PTIL  PH      PPPS   S    TTFTH    P      D+ +    PDFASVFASQR FFSSPG+SNSI ES       P   + +P GG V  VPKYS+NPYVDFLRSM EMI+S+Q   D+T DWDYLHELLLCYL LNP HTHKYI++AFT L++ LLSS+
Sbjct:    1 MPTLFSKRLHLCFFKLKYPTILHHPH------PPPSTDNS----TTFTH----PSSSSDDDDRSSSTEPDFASVFASQRFFFSSPGTSNSIVES-------PDTRTFVPTGGGVT-VPKYSLNPYVDFLRSMHEMIRSRQ--VDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSST 162          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Match: tr|V7BEC7|V7BEC7_PHAVU (Transcription repressor OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G057800g PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.721e-59
Identity = 115/186 (61.83%), Postives = 130/186 (69.89%), Query Frame = 0
Query:    1 MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHHHDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
            MPSLFSK LHLCFFKLK PTIL  PH      PPPS   S    TTFTH    P  D  +  +TE   PDFASVFASQR FFSSPG+SNSI ES       P   + +  GG V  VPKYS+NPYVDFLRSM EMI+S+Q V D+T DWDYLHELLLCYL +NP HTHKYI++AFT L++ LLSS+
Sbjct:    1 MPSLFSKHLHLCFFKLKYPTILHHPH------PPPSTDNS----TTFTH----PSSDDDTSSSTE---PDFASVFASQRFFFSSPGTSNSIVES-------PDTRTFVHTGGGVT-VPKYSLNPYVDFLRSMHEMIRSRQ-VLDITEDWDYLHELLLCYLAVNPTHTHKYIIRAFTDLVLQLLSST 160          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4I8R6|OFP12_ARATH (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 7.264e-23
Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   71 FASVFASQRLFFSSPGSSNSITES---ESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
              +V AS+R FFSSPG SNSIT+S       NY      L+  G  VK   + S +PY DF RSMQEMI +     D+   +++LHELLL YL+LN   THK+I++AF  +LV LLS  
Sbjct:  107 LTAVLASRRFFFSSPGCSNSITDSPDLRCRDNYDTA-TRLLTGGTAVKHYVQ-SPDPYNDFRRSMQEMIDAVTNAGDLRR-YEFLHELLLSYLSLNAADTHKFIIRAFADILVSLLSDG 222          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SKY9|OFP16_ARATH (Transcription repressor OFP16 OS=Arabidopsis thaliana OX=3702 GN=OFP16 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.080e-20
Identity = 54/145 (37.24%), Postives = 75/145 (51.72%), Query Frame = 0
Query:   69 PDFASVFASQRLFFSSPGSSNSITESESP-------------------------PNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTND----WDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLS 184
            PD ++ FAS+R FFSSPG SN+IT+S  P                          N      + +  GG        S +P  DF RSMQEMI +     +++ D    +D+L ELLL YL+LNP  THK++++AF+ +LV LLS
Sbjct:   94 PDVSAAFASRRFFFSSPGRSNAITDSPEPRSREFSDNYDDATITSTKKKKKKVYDNSVTTTTTRLISGGTAVTQHVDSPDPLTDFRRSMQEMIDAAIDAGELSRDPNDGYDFLDELLLTYLSLNPADTHKFVIRAFSDILVSLLS 238          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/Swiss-Prot
Match: sp|O23341|OFP11_ARATH (Transcription repressor OFP11 OS=Arabidopsis thaliana OX=3702 GN=OFP11 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.871e-18
Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  111 GGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLS 184
            GG        S +PY DF RSM+EM++++    DV  D +YLHELL CYL LNPKHTH++IV AF   L+ LLS
Sbjct:   99 GGTAIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYLHELLFCYLYLNPKHTHRFIVSAFADTLLWLLS 172          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9S7T5|OFP14_ARATH (Transcription repressor OFP14 OS=Arabidopsis thaliana OX=3702 GN=OFP14 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.925e-13
Identity = 53/184 (28.80%), Postives = 84/184 (45.65%), Query Frame = 0
Query:   39 YSFHFNTTFTHH-HDEPEEDYFSDETTELPPPDFASVFASQRLF---FSSPG-----SSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSSSSSSSSSSFSSLPPRSPPSPNPNNRLR 213
            Y   F  T+ H  +D P++           PPD   +  ++RL     SS G     ++++ +E +S      P N +         V +Y+  P  DF +SM EM++S+  + +   DWD + ELL CYL LN K +HK+I+ AF  L++ L       +      SL  R+       +RLR
Sbjct:  130 YRHRFERTWGHAVYDSPKQ-----------PPD---LLRTERLSPPPGSSEGRPSMETTSTSSERQSRSTLVLPENCIA--------VLRYTDEPQEDFRQSMVEMMESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALREKEKRITRKGHVRSLSTRA-----ARDRLR 286          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SJ45|OPF15_ARATH (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 8.976e-11
Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 0
Query:   76 ASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDL 182
            +S+RL F S G +NSI E  +                        S +PY DF RSM+EM+++      + +DW  L +LLL +L +N K +H+YI  AF  LL++L
Sbjct:   77 SSERLIFESKGETNSILEEATSKREEEDEEE------GFMLFSLESDDPYSDFKRSMEEMVEAHA----LHHDWKSLEKLLLQFLKVNAKTSHRYIFAAFVDLLMNL 173          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. Araport11
Match: AT1G05420.1 (| ovate family protein 12 | Chr1:1590073-1590753 FORWARD LENGTH=226 | 201606)

HSP 1 Score: 95.1301 bits (235), Expect = 7.432e-24
Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   71 FASVFASQRLFFSSPGSSNSITES---ESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
              +V AS+R FFSSPG SNSIT+S       NY      L+  G  VK   + S +PY DF RSMQEMI +     D+   +++LHELLL YL+LN   THK+I++AF  +LV LLS  
Sbjct:  107 LTAVLASRRFFFSSPGCSNSITDSPDLRCRDNYDTA-TRLLTGGTAVKHYVQ-SPDPYNDFRRSMQEMIDAVTNAGDLRR-YEFLHELLLSYLSLNAADTHKFIIRAFADILVSLLSDG 222          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. Araport11
Match: AT1G05420.2 (| ovate family protein 12 | Chr1:1590025-1590753 FORWARD LENGTH=242 | 201606)

HSP 1 Score: 95.1301 bits (235), Expect = 9.683e-24
Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   71 FASVFASQRLFFSSPGSSNSITES---ESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSS 186
              +V AS+R FFSSPG SNSIT+S       NY      L+  G  VK   + S +PY DF RSMQEMI +     D+   +++LHELLL YL+LN   THK+I++AF  +LV LLS  
Sbjct:  123 LTAVLASRRFFFSSPGCSNSITDSPDLRCRDNYDTA-TRLLTGGTAVKHYVQ-SPDPYNDFRRSMQEMIDAVTNAGDLRR-YEFLHELLLSYLSLNAADTHKFIIRAFADILVSLLSDG 238          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. Araport11
Match: AT2G32100.1 (| ovate family protein 16 | Chr2:13647852-13648586 FORWARD LENGTH=244 | 201606)

HSP 1 Score: 89.7373 bits (221), Expect = 1.105e-21
Identity = 54/145 (37.24%), Postives = 75/145 (51.72%), Query Frame = 0
Query:   69 PDFASVFASQRLFFSSPGSSNSITESESP-------------------------PNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTND----WDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLS 184
            PD ++ FAS+R FFSSPG SN+IT+S  P                          N      + +  GG        S +P  DF RSMQEMI +     +++ D    +D+L ELLL YL+LNP  THK++++AF+ +LV LLS
Sbjct:   94 PDVSAAFASRRFFFSSPGRSNAITDSPEPRSREFSDNYDDATITSTKKKKKKVYDNSVTTTTTRLISGGTAVTQHVDSPDPLTDFRRSMQEMIDAAIDAGELSRDPNDGYDFLDELLLTYLSLNPADTHKFVIRAFSDILVSLLS 238          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. Araport11
Match: AT4G14860.1 (| ovate family protein 11 | Chr4:8516531-8517079 FORWARD LENGTH=182 | 201606)

HSP 1 Score: 81.2629 bits (199), Expect = 4.983e-19
Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  111 GGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLS 184
            GG        S +PY DF RSM+EM++++    DV  D +YLHELL CYL LNPKHTH++IV AF   L+ LLS
Sbjct:   99 GGTAIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYLHELLFCYLYLNPKHTHRFIVSAFADTLLWLLS 172          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. Araport11
Match: AT1G79960.1 (| ovate family protein 14 | Chr1:30079665-30080549 REVERSE LENGTH=294 | 201606)

HSP 1 Score: 70.8626 bits (172), Expect = 1.969e-14
Identity = 53/184 (28.80%), Postives = 84/184 (45.65%), Query Frame = 0
Query:   39 YSFHFNTTFTHH-HDEPEEDYFSDETTELPPPDFASVFASQRLF---FSSPG-----SSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSSSSSSSSSSFSSLPPRSPPSPNPNNRLR 213
            Y   F  T+ H  +D P++           PPD   +  ++RL     SS G     ++++ +E +S      P N +         V +Y+  P  DF +SM EM++S+  + +   DWD + ELL CYL LN K +HK+I+ AF  L++ L       +      SL  R+       +RLR
Sbjct:  130 YRHRFERTWGHAVYDSPKQ-----------PPD---LLRTERLSPPPGSSEGRPSMETTSTSSERQSRSTLVLPENCIA--------VLRYTDEPQEDFRQSMVEMMESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALREKEKRITRKGHVRSLSTRA-----ARDRLR 286          
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. Araport11
Match: AT2G36050.1 (| ovate family protein 15 | Chr2:15135852-15136637 REVERSE LENGTH=261 | 201606)

HSP 1 Score: 63.1586 bits (152), Expect = 9.184e-12
Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 0
Query:   76 ASQRLFFSSPGSSNSITESESPPNYTPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWDYLHELLLCYLTLNPKHTHKYIVQAFTHLLVDL 182
            +S+RL F S G +NSI E  +                        S +PY DF RSM+EM+++      + +DW  L +LLL +L +N K +H+YI  AF  LL++L
Sbjct:   77 SSERLIFESKGETNSILEEATSKREEEDEEE------GFMLFSLESDDPYSDFKRSMEEMVEAHA----LHHDWKSLEKLLLQFLKVNAKTSHRYIFAAFVDLLMNL 173          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2Z6NV46|A0A2Z6NV46_TRISU1.401e-9983.33Transcription repressor OS=Trifolium subterraneum ... [more]
tr|A0A2K3MQR5|A0A2K3MQR5_TRIPR2.673e-9779.58Transcription repressor OS=Trifolium pratense OX=5... [more]
tr|A0A1S2Y0V5|A0A1S2Y0V5_CICAR1.397e-9076.06Transcription repressor OS=Cicer arietinum OX=3827... [more]
tr|A0A072W0S4|A0A072W0S4_MEDTR1.001e-8578.14Transcription repressor OS=Medicago truncatula OX=... [more]
tr|A0A396K274|A0A396K274_MEDTR1.914e-8578.14Transcription repressor OS=Medicago truncatula OX=... [more]
tr|A0A4D6N5Z6|A0A4D6N5Z6_VIGUN1.993e-6161.83Transcription repressor OS=Vigna unguiculata OX=39... [more]
tr|A0A0S3SMJ7|A0A0S3SMJ7_PHAAN3.480e-6060.75Transcription repressor OS=Vigna angularis var. an... [more]
tr|A0A0L9TZY0|A0A0L9TZY0_PHAAN3.480e-6060.75Transcription repressor OS=Phaseolus angularis OX=... [more]
tr|A0A3Q0EL33|A0A3Q0EL33_VIGRR4.989e-6060.75Transcription repressor OS=Vigna radiata var. radi... [more]
tr|V7BEC7|V7BEC7_PHAVU3.721e-5961.83Transcription repressor OS=Phaseolus vulgaris OX=3... [more]
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BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
sp|F4I8R6|OFP12_ARATH7.264e-2347.06Transcription repressor OFP12 OS=Arabidopsis thali... [more]
sp|Q9SKY9|OFP16_ARATH1.080e-2037.24Transcription repressor OFP16 OS=Arabidopsis thali... [more]
sp|O23341|OFP11_ARATH4.871e-1852.70Transcription repressor OFP11 OS=Arabidopsis thali... [more]
sp|Q9S7T5|OFP14_ARATH1.925e-1328.80Transcription repressor OFP14 OS=Arabidopsis thali... [more]
sp|Q9SJ45|OPF15_ARATH8.976e-1134.58Transcription repressor OFP15 OS=Arabidopsis thali... [more]
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BLAST of Vfaba.Tiffany.R1.3g116200.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 6
Match NameE-valueIdentityDescription
AT1G05420.17.432e-2447.06| ovate family protein 12 | Chr1:1590073-1590753 F... [more]
AT1G05420.29.683e-2447.06| ovate family protein 12 | Chr1:1590025-1590753 F... [more]
AT2G32100.11.105e-2137.24| ovate family protein 16 | Chr2:13647852-13648586... [more]
AT4G14860.14.983e-1952.70| ovate family protein 11 | Chr4:8516531-8517079 F... [more]
AT1G79960.11.969e-1428.80| ovate family protein 14 | Chr1:30079665-30080549... [more]
AT2G36050.19.184e-1234.58| ovate family protein 15 | Chr2:15135852-15136637... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006458Ovate protein family, C-terminalTIGRFAMTIGR01568TIGR01568coord: 119..184
e-value: 4.0E-26
score: 89.1
IPR006458Ovate protein family, C-terminalPFAMPF04844Ovatecoord: 121..182
e-value: 9.2E-23
score: 80.0
IPR006458Ovate protein family, C-terminalPROSITEPS51754OVATEcoord: 117..181
score: 16.78693
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..213
IPR038933Ovate protein familyPANTHERPTHR33057TRANSCRIPTION REPRESSOR OFP7-RELATEDcoord: 42..185

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.3g116200.1_tif_v1 ID=Vfaba.Tiffany.R1.3g116200.1_tif_v1; Name=Vfaba.Tiffany.R1.3g116200.1; organism=Vicia faba; type=mRNA; length=642bp
ATGCCAAGTCTATTCTCAAAACAACTTCACCTCTGCTTCTTCAAACTCAA
AAACCCCACAATTCTCTCCCAACCTCACTCACAACAAAACACCACTCCAC
CACCATCACCACCATACTCCTTCCATTTCAACACAACCTTCACCCACCAC
CACGACGAACCCGAAGAAGACTATTTCTCCGACGAGACCACAGAACTTCC
ACCACCCGACTTCGCCTCCGTCTTCGCTTCCCAACGACTCTTCTTCTCCT
CCCCGGGCAGCTCCAACTCCATCACGGAATCAGAATCTCCCCCCAACTAC
ACCCCACCCCACAACTCCTTGATACCAAAAGGAGGTAACGTGAAAAGGGT
GCCAAAATACTCTGTGAACCCTTACGTTGATTTCCTCCGTTCTATGCAGG
AAATGATTCAATCTCAACAACAAGTCTTCGATGTTACTAATGATTGGGAT
TATCTTCATGAGCTTCTACTATGTTACCTTACTCTCAATCCTAAACATAC
TCACAAGTATATTGTTCAAGCTTTCACTCACCTCCTTGTCGACCTTTTAT
CTTCTTCCTCCTCCTCCTCCTCCTCTTCATCATTCTCCTCTTTGCCGCCA
CGTTCACCGCCTTCTCCGAATCCCAATAACAGACTCCGATAA
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protein sequence of Vfaba.Tiffany.R1.3g116200.1_tif_v1

>Vfaba.Tiffany.R1.3g116200.1_tif_v1 ID=Vfaba.Tiffany.R1.3g116200.1_tif_v1; Name=Vfaba.Tiffany.R1.3g116200.1_tif_v1; organism=Vicia faba; type=polypeptide; length=213bp
MPSLFSKQLHLCFFKLKNPTILSQPHSQQNTTPPPSPPYSFHFNTTFTHH
HDEPEEDYFSDETTELPPPDFASVFASQRLFFSSPGSSNSITESESPPNY
TPPHNSLIPKGGNVKRVPKYSVNPYVDFLRSMQEMIQSQQQVFDVTNDWD
YLHELLLCYLTLNPKHTHKYIVQAFTHLLVDLLSSSSSSSSSSSFSSLPP
RSPPSPNPNNRLR
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mRNA from alignment at chr3:901125172..901125813-

Legend: exonCDSpolypeptidemRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.3g116200.1_tif_v1 ID=Vfaba.Tiffany.R1.3g116200.1_tif_v1; Name=Vfaba.Tiffany.R1.3g116200.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:901125172..901125813- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006458Ovate_C
IPR038933Ovate
Vocabulary: Biological Process
TermDefinition
GO:0045892negative regulation of DNA-templated transcription