Vfaba.Tiffany.R1.3g121640.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PM98|A0A2K3PM98_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g013126 PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.842e-80 Identity = 136/193 (70.47%), Postives = 152/193 (78.76%), Query Frame = 0 Query: 3 MSAFDSECSSGCESGWTLYFQHSYGENTRFIDGSEGYYGKYKDKRVITNDENYSQDLSMVSDASSGPPHIPYD-----NEKHNGNSLVKQNNKSETKKQKVRENVEEV---QQNLPSFLHDTASSHVFDFSTNNVIETNQQN-------YSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSK 180 MSA+DSECSSGCESGWTLY +HSYG+ TR+I G+EGYYGK+KDKRV +DLSMVSDASSGPPH+PYD NEKHN +VKQ NKS +KKQKVREN + + QQNLPSFLHDTASSHVFDFSTNNV TNQQN YSQGFSA+NYFEG+SSYQ+E FGFLQ S S+NELQ NK WYG K Sbjct: 1 MSAYDSECSSGCESGWTLYLEHSYGD-TRYIGGTEGYYGKHKDKRVTNEYSEGVEDLSMVSDASSGPPHLPYDDDAYFNEKHN---VVKQ-NKSGSKKQKVRENKQHLVQDQQNLPSFLHDTASSHVFDFSTNNVGGTNQQNYTGNMVDYSQGFSASNYFEGKSSYQDEQFGFLQPSISQNELQDNK-WYGGK 187
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VQE3|A0A072VQE3_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=25485325 PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 3.858e-70 Identity = 135/200 (67.50%), Postives = 154/200 (77.00%), Query Frame = 0 Query: 1 MNMSAFDSECSSGCESGWTLYFQHSYGENTRFIDGSEGYYG-KYKDKRVITND--ENYSQDLSMVSDASSGPPHIPYDNEKH-NGNSLVKQNNKSETKKQKVRENVE-----EVQQNLPSFLHDTASSHVFDFSTNNVIETNQQN-------YSQGFSAT-NYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGF 183 MNMSAFDSECSSGCESGWTLY +HSY E+TRFI G+EGYYG ++KDKRV TN+ E +DLSMVSDASSGPPH+PYD++ + N V + +K TKKQKVREN + E QQ+LPSFLHDTASSHVFDFSTNNV+ TNQQN YSQGFSAT NYFEG+SSYQEE FGFLQ S+N+LQ N WYG K F Sbjct: 1 MNMSAFDSECSSGCESGWTLYLEHSY-EDTRFIGGTEGYYGNQHKDKRV-TNEYSEEGVEDLSMVSDASSGPPHLPYDDDVYFNEKDNVVKKHKKGTKKQKVRENKQHAIAVEDQQHLPSFLHDTASSHVFDFSTNNVVGTNQQNYVGNMVDYSQGFSATNNYFEGKSSYQEEKFGFLQPPLSKNDLQGN-NWYGGKNQF 197
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y097|A0A1S2Y097_CICAR (uncharacterized protein LOC101498843 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101498843 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 9.055e-62 Identity = 121/202 (59.90%), Postives = 148/202 (73.27%), Query Frame = 0 Query: 3 MSAFDSECSSGCESGWTLYFQHSYGENTRFIDGSEGYYGKYKDKRVITNDENYSQ---DLSMVSDASSGPP-HIPYD------NEKHNG-----NSLVKQNNKSETKKQKVRENVE-----EVQQNLPSFLHDTASSHVFDFSTNNVIETNQQ-------NYSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWY 177 MSAFDSECSSGCESGWTLY +HS+G GYYG++KDK ++TND YS+ DLSM+SDASSGPP ++P+D N+K+N ++LVKQN KS +KKQ V++ + E QQ+LPSFLHDTASSHVFDFSTNN + TNQQ +YSQGFSATNYFEGRSSYQE++FG+LQ S S+NE+Q NK WY Sbjct: 1 MSAFDSECSSGCESGWTLYLEHSFGG---------GYYGEHKDK-IVTND--YSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQN-KSASKKQNVKDKNKQQLQVEDQQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFEGRSSYQEQHFGYLQPSLSKNEIQGNK-WY 188
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3E5B2|A0A1S3E5B2_CICAR (uncharacterized protein LOC101498843 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101498843 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.110e-47 Identity = 102/174 (58.62%), Postives = 124/174 (71.26%), Query Frame = 0 Query: 3 MSAFDSECSSGCESGWTLYFQHSYGENTRFIDGSEGYYGKYKDKRVITNDENYSQ---DLSMVSDASSGPP-HIPYD------NEKHNG-----NSLVKQNNKSETKKQKVREN------VEEVQQNLPSFLHDTASSHVFDFSTNNVIETNQQ-------NYSQGFSATNYFE 148 MSAFDSECSSGCESGWTLY +HS+G GYYG++KDK ++TND YS+ DLSM+SDASSGPP ++P+D N+K+N ++LVKQN KS +KKQ V++ VE+ QQ+LPSFLHDTASSHVFDFSTNN + TNQQ +YSQGFSATNYFE Sbjct: 1 MSAFDSECSSGCESGWTLYLEHSFGG---------GYYGEHKDK-IVTND--YSEGVEDLSMISDASSGPPQYLPFDDDANYFNQKNNACFYSESNLVKQN-KSASKKQNVKDKNKQQLQVED-QQHLPSFLHDTASSHVFDFSTNNDVGTNQQTYKESMVDYSQGFSATNYFE 160
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MVV4|A0A6A5MVV4_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00047925 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 7.733e-47 Identity = 104/199 (52.26%), Postives = 133/199 (66.83%), Query Frame = 0 Query: 3 MSAFDSECSSGCESGWTLYFQHSYGENTRFIDGSEGYYGKYKDKRVITNDENYSQDLSMVSDASSGPPHIPYDN-----EKHNGNSL----VKQNNKSETKKQKVRENVEEVQQNLPSFLHDTASSHVFDFSTNNVIETNQ-------QNYSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGFGM 185 M+ SE SSGCESGWTLY +HSYG +++I G++G Y ++ DKR I +E +D+SM+SDASSGPP PYD +++NG S V + K+ KKQKV+EN QQ LPSFLHDTASS VFDFSTN V NQ Q+YSQGFS +NY +GRS++ ++ GF+Q S S NE Q N+ WYG +KG GM Sbjct: 1 MNTLGSENSSGCESGWTLYLEHSYG-GSQYIGGNDGIYEEHLDKR-IKEEEYEEEDMSMISDASSGPPQFPYDEAYFNEQEYNGFSYPEPKVVKLAKNGIKKQKVKEN----QQYLPSFLHDTASSCVFDFSTNEVAVNNQQSSTESMQDYSQGFS-SNYLKGRSTFH-QHLGFIQPSLSANEYQGNE-WYG-EKGMGM 189
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FKJ4|A0A371FKJ4_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_40952 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.312e-46 Identity = 114/215 (53.02%), Postives = 134/215 (62.33%), Query Frame = 0 Query: 3 MSAFDSECSSGCESGWTLYFQHSYGEN--TRFIDGSEG--YYGKYKDKRVITNDENYSQDLSMVSDASSGPPHI-PYDNEKHNGNSLVKQNN-----KSETKKQKVRENVEEVQQNLPSFLHDTASSHVFDFST--------------NNVIETNQQ-------NYSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGFGMR 186 M+ FDSECSSGCESGWTLY +HS+ + + G+EG Y ++K KR D +DLSMVSDASSGPPH Y NE+ N + KS+TK+ KV+EN Q+LPSFLHDTASS VFDFST NNV NQQ +YSQGFSAT YFEGRSS+QEE+FGFL QSENEL+ NK WYG KG G+R Sbjct: 1 MNTFDSECSSGCESGWTLYLEHSFLDQNASSHRGGTEGFNYEEEHKGKRFKDEDSG-EEDLSMVSDASSGPPHHEAYFNEQVNNGCFYSASKAVKLAKSDTKRLKVQEN-----QHLPSFLHDTASSPVFDFSTNVFVCYSWFLTKFQNNVNGANQQTSTGSVLDYSQGFSAT-YFEGRSSFQEEHFGFL---QSENELEGNK-WYGG-KGMGIR 203
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151U7I7|A0A151U7I7_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_007970 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.396e-46 Identity = 108/200 (54.00%), Postives = 130/200 (65.00%), Query Frame = 0 Query: 3 MSAFDSECSSGCESGWTLYFQHSY-GENTRFIDGSEGYYGKYKDKRVITNDENYSQDLSMVSDASSGPPHIP----YDNEKHNGN----SLVKQNNKSETKKQKVRENVEEVQQNLPSFLHDTASSHVFDFSTNNVIETNQQ-------NYSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGFGMR 186 M+ F SECSSGCESGWTLY + S+ +N G+ ++KDKR D +DLSM+SDASSGPPH P Y NE+ NG+ S + K+ TKKQKV+EN Q+LPS LHDTASS FDFSTNN+ QQ +YSQGFSAT YFEG SS+QE++FGFL QSENEL+ NK WYG KG G+R Sbjct: 1 MNTFGSECSSGCESGWTLYLERSFLNQNASSHRGATEE--EHKDKRFKHEDSG-EEDLSMLSDASSGPPHFPHYEAYFNEEVNGSFYSASKAVKLAKNGTKKQKVKEN-----QHLPSILHDTASSPFFDFSTNNITGGKQQTSTGSVLDYSQGFSAT-YFEGGSSFQEQHFGFL---QSENELEGNK-WYGG-KGMGIR 186
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|I1LED2|I1LED2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100798463 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 7.569e-45 Identity = 113/206 (54.85%), Postives = 136/206 (66.02%), Query Frame = 0 Query: 3 MSAFDSE-CSSGCESGWTLYFQHSYGENTRFIDGSEGYYGK-YKDKRVITNDENYSQDLSMVSDASSGPPHIP------YDNEKHNG-----NSLVKQNNKSETKKQKVRENVEEV--QQNLPSFLHDTASSHVFDFSTNNVIETNQQ-------NYSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGFGMR 186 M+ F SE CSSGCESGWTLY + S+ + G+EG Y + +KDKR +E +DLSMVSDASSGPPH P Y NE+ NG + KS TKK+K++EN + + QQ+LPSFL+DTASS VFDFSTNNV NQQ +YSQGFSAT YFEGRSS+Q E+FGFL QS NELQ K+WYG KG G+R Sbjct: 1 MNTFSSEICSSGCESGWTLYLEQSF--LNQKAGGTEGSYEEEHKDKRFKDEEE---EDLSMVSDASSGPPHFPDYDEANYFNEEVNGCFYSASKKAVMQAKSGTKKKKIKENQQHLEDQQHLPSFLYDTASSPVFDFSTNNVNVANQQTSIGSMLDYSQGFSAT-YFEGRSSFQGEHFGFL---QSGNELQ-GKKWYGG-KGMGIR 195
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QU52|A0A0B2QU52_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_028132 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 7.569e-45 Identity = 113/206 (54.85%), Postives = 136/206 (66.02%), Query Frame = 0 Query: 3 MSAFDSE-CSSGCESGWTLYFQHSYGENTRFIDGSEGYYGK-YKDKRVITNDENYSQDLSMVSDASSGPPHIP------YDNEKHNG-----NSLVKQNNKSETKKQKVRENVEEV--QQNLPSFLHDTASSHVFDFSTNNVIETNQQ-------NYSQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGFGMR 186 M+ F SE CSSGCESGWTLY + S+ + G+EG Y + +KDKR +E +DLSMVSDASSGPPH P Y NE+ NG + KS TKK+K++EN + + QQ+LPSFL+DTASS VFDFSTNNV NQQ +YSQGFSAT YFEGRSS+Q E+FGFL QS NELQ K+WYG KG G+R Sbjct: 1 MNTFSSEICSSGCESGWTLYLEQSF--LNQKAGGTEGSYEEEHKDKRFKDEEE---EDLSMVSDASSGPPHFPDYDEANYFNEEVNGCFYSASKKAVMQAKSGTKKKKIKENQQHLEDQQHLPSFLYDTASSPVFDFSTNNVNVANQQTSIGSMLDYSQGFSAT-YFEGRSSFQGEHFGFL---QSGNELQ-GKKWYGG-KGMGIR 195
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6B9VG76|A0A6B9VG76_ARAHY (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=DS421_19g673510 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.114e-44 Identity = 101/194 (52.06%), Postives = 125/194 (64.43%), Query Frame = 0 Query: 1 MNMSAFDSECSSGCESGWTLYFQHSYGENTRFIDGSEGYYGKYKDKRVITNDENYSQDLSMVSDASSGPPHIPYDNEKHNGNSLVKQNNKSETKKQKVRENVEEVQ-QNLPSFLHDTASSHVFDFSTNNVIETNQQNY-------SQGFSATNYFEGRSSYQEENFGFLQASQSENELQSNKRWYGSKKGFGMR 186 MN + SECSSG ESGWTLY HSY I+ + GYY + K +R D +DLSMVSDASS PPH + +++ N+ S +K K ++ V+EVQ Q++PS+LHDTASSHV+DFSTN V ++NQQ Y SQGFSAT YF+ +SS Q E+FGF Q S SENELQ N WYG KG GMR Sbjct: 1 MNDAMAASECSSGVESGWTLYLDHSYS-----INHNSGYYEEEK-RRNKHEDSTDEEDLSMVSDASSWPPHDDTNYDENQNNNNNGAFCNSASKSVKRQKKVKEVQVQHMPSYLHDTASSHVYDFSTNKVDDSNQQTYTESMLDCSQGFSAT-YFQRKSSCQ-EHFGFFQPSLSENELQENNSWYGG-KGIGMR 185
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8L9K4|SOFL5_ARATH (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 5.294e-15 Identity = 64/172 (37.21%), Postives = 90/172 (52.33%), Query Frame = 0 Query: 11 SSGCESGWTLYFQHSYGENTR--FIDGSEGYYGKYKDKRVITNDENY--------SQDLSMVSDASSGPPHIPYDNEKHNGNSLVKQNNKSETKKQKVRENVEEVQQNLPSFLHDTASSHVFDFS--------TNNVIET---NQQNYSQGFSATNYFEGRSSYQEENFGFL 161 SSGCESGWTLY S + F D S G+ + + K + D+NY DLSM+SDASSGP +I ++ VK+ N KKQ RE + + S L DTASS +F+F N + +T + +YSQGFSAT F+ ++++QE+ G+L Sbjct: 5 SSGCESGWTLYLDQSVSSPSPSCFRD-SNGFDSRRRSKD--SWDQNYVHQEEEEEEDDLSMISDASSGPRNISEEDS-------VKKINIVGLKKQCKREKKRRDYEKMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQ-FQDKTAFQEQ-CGYL 164
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. Araport11
Match: AT4G33800.2 (| hypothetical protein | Chr4:16210404-16211307 REVERSE LENGTH=170 | 201606) HSP 1 Score: 72.4034 bits (176), Expect = 5.417e-16 Identity = 64/172 (37.21%), Postives = 90/172 (52.33%), Query Frame = 0 Query: 11 SSGCESGWTLYFQHSYGENTR--FIDGSEGYYGKYKDKRVITNDENY--------SQDLSMVSDASSGPPHIPYDNEKHNGNSLVKQNNKSETKKQKVRENVEEVQQNLPSFLHDTASSHVFDFS--------TNNVIET---NQQNYSQGFSATNYFEGRSSYQEENFGFL 161 SSGCESGWTLY S + F D S G+ + + K + D+NY DLSM+SDASSGP +I ++ VK+ N KKQ RE + + S L DTASS +F+F N + +T + +YSQGFSAT F+ ++++QE+ G+L Sbjct: 5 SSGCESGWTLYLDQSVSSPSPSCFRD-SNGFDSRRRSKD--SWDQNYVHQEEEEEEDDLSMISDASSGPRNISEEDS-------VKKINIVGLKKQCKREKKRRDYEKMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQ-FQDKTAFQEQ-CGYL 164
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. Araport11
Match: AT4G33800.1 (| hypothetical protein | Chr4:16210404-16211307 REVERSE LENGTH=170 | 201606) HSP 1 Score: 72.4034 bits (176), Expect = 5.417e-16 Identity = 64/172 (37.21%), Postives = 90/172 (52.33%), Query Frame = 0 Query: 11 SSGCESGWTLYFQHSYGENTR--FIDGSEGYYGKYKDKRVITNDENY--------SQDLSMVSDASSGPPHIPYDNEKHNGNSLVKQNNKSETKKQKVRENVEEVQQNLPSFLHDTASSHVFDFS--------TNNVIET---NQQNYSQGFSATNYFEGRSSYQEENFGFL 161 SSGCESGWTLY S + F D S G+ + + K + D+NY DLSM+SDASSGP +I ++ VK+ N KKQ RE + + S L DTASS +F+F N + +T + +YSQGFSAT F+ ++++QE+ G+L Sbjct: 5 SSGCESGWTLYLDQSVSSPSPSCFRD-SNGFDSRRRSKD--SWDQNYVHQEEEEEEDDLSMISDASSGPRNISEEDS-------VKKINIVGLKKQCKREKKRRDYEKMNSLLDDTASSPLFNFPHMLQKSVGGNKIEQTFPESTLDYSQGFSATQ-FQDKTAFQEQ-CGYL 164 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 1
BLAST of Vfaba.Tiffany.R1.3g121640.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.3g121640.1_tif_v1 ID=Vfaba.Tiffany.R1.3g121640.1_tif_v1; Name=Vfaba.Tiffany.R1.3g121640.1; organism=Vicia faba; type=mRNA; length=561bpback to top protein sequence of Vfaba.Tiffany.R1.3g121640.1_tif_v1 >Vfaba.Tiffany.R1.3g121640.1_tif_v1 ID=Vfaba.Tiffany.R1.3g121640.1_tif_v1; Name=Vfaba.Tiffany.R1.3g121640.1_tif_v1; organism=Vicia faba; type=polypeptide; length=186bpback to top mRNA from alignment at chr3:939353383..939354235+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.3g121640.1_tif_v1 ID=Vfaba.Tiffany.R1.3g121640.1_tif_v1; Name=Vfaba.Tiffany.R1.3g121640.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:939353383..939354235+ (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
|