Vfaba.Tiffany.R1.4g060520.1

Transcript Overview
NameVfaba.Tiffany.R1.4g060520.1
Unique NameVfaba.Tiffany.R1.4g060520.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length975
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:470665090..470668121 -Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR377Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL334Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL638Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crtifL119Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvtifL104Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuR479Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR311Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifL0041Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0043Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0236Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR446Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR412Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR527Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR554Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL570Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_004510120.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg16727.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_22394.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_11782Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.4g078200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g060520Vfaba.Tiffany.R1.4g060520_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g060520.1_tif_v1-exonVfaba.Tiffany.R1.4g060520.1_tif_v1-exon-chr4_tif_v1:470665090..470665449Vicia fabaexon
Vfaba.Tiffany.R1.4g060520.1_tif_v1-exonVfaba.Tiffany.R1.4g060520.1_tif_v1-exon-chr4_tif_v1:470665639..470665713Vicia fabaexon
Vfaba.Tiffany.R1.4g060520.1_tif_v1-exonVfaba.Tiffany.R1.4g060520.1_tif_v1-exon-chr4_tif_v1:470665820..470665894Vicia fabaexon
Vfaba.Tiffany.R1.4g060520.1_tif_v1-exonVfaba.Tiffany.R1.4g060520.1_tif_v1-exon-chr4_tif_v1:470666019..470666084Vicia fabaexon
Vfaba.Tiffany.R1.4g060520.1_tif_v1-exonVfaba.Tiffany.R1.4g060520.1_tif_v1-exon-chr4_tif_v1:470667626..470667702Vicia fabaexon
Vfaba.Tiffany.R1.4g060520.1_tif_v1-exonVfaba.Tiffany.R1.4g060520.1_tif_v1-exon-chr4_tif_v1:470667800..470668121Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g060520.1_tif_v1-cdsVfaba.Tiffany.R1.4g060520.1_tif_v1-cds-chr4_tif_v1:470665090..470665449Vicia fabaCDS
Vfaba.Tiffany.R1.4g060520.1_tif_v1-cdsVfaba.Tiffany.R1.4g060520.1_tif_v1-cds-chr4_tif_v1:470665639..470665713Vicia fabaCDS
Vfaba.Tiffany.R1.4g060520.1_tif_v1-cdsVfaba.Tiffany.R1.4g060520.1_tif_v1-cds-chr4_tif_v1:470665820..470665894Vicia fabaCDS
Vfaba.Tiffany.R1.4g060520.1_tif_v1-cdsVfaba.Tiffany.R1.4g060520.1_tif_v1-cds-chr4_tif_v1:470666019..470666084Vicia fabaCDS
Vfaba.Tiffany.R1.4g060520.1_tif_v1-cdsVfaba.Tiffany.R1.4g060520.1_tif_v1-cds-chr4_tif_v1:470667626..470667702Vicia fabaCDS
Vfaba.Tiffany.R1.4g060520.1_tif_v1-cdsVfaba.Tiffany.R1.4g060520.1_tif_v1-cds-chr4_tif_v1:470667800..470668121Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g060520.1_tif_v1Vfaba.Tiffany.R1.4g060520.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.4g060520.1_tif_v1Vfaba.Tiffany.R1.4g060520.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072TWV3|A0A072TWV3_MEDTR (Putative Zinc finger, U1-type, SF3A2 domain-containing protein OS=Medicago truncatula OX=3880 GN=25500193 PE=3 SV=1)

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 313/324 (96.60%), Postives = 319/324 (98.46%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAPLGTRPPSMPPPQGFPGQQMQS 324
            MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRK+N+KK+VKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQR+QPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK KPPE TKPQPPAS PNGTTAPGVPPRPMPPP QAPLPPPPPPPQGLPP AP+GNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAP+GTRPPSMPPPQGFPGQQMQS
Sbjct:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKVNMKKSVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRIQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEATKPQPPASAPNGTTAPGVPPRPMPPPPQAPLPPPPPPPQGLPPGAPMGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAPIGTRPPSMPPPQGFPGQQMQS 324          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YUL6|A0A1S2YUL6_CICAR (splicing factor 3A subunit 2 OS=Cicer arietinum OX=3827 GN=LOC101494955 PE=3 SV=1)

HSP 1 Score: 461.07 bits (1185), Expect = 9.263e-161
Identity = 309/326 (94.79%), Postives = 313/326 (96.01%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRP---GAMPPLPPPAPLGTRPPSMPPPQGFPGQQMQ 323
            MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNL+KTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDL KPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK KPPE  KPQPPASTPNGTTAPGVPPRP+PPP Q  LPPPPPPPQGLPP AP+GNPPRAPPPPM GSMPPPPPMAANGPRP   GAMPPLPPPAP+G RPPSMPPPQGFPGQQMQ
Sbjct:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLRKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPETNKPQPPASTPNGTTAPGVPPRPLPPPPQGQLPPPPPPPQGLPPGAPMGNPPRAPPPPMPGSMPPPPPMAANGPRPVPSGAMPPLPPPAPMGARPPSMPPPQGFPGQQMQ 326          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5NXE9|A0A6A5NXE9_LUPAL (Matrin-type domain-containing protein (Fragment) OS=Lupinus albus OX=3870 GN=Lal_00024983 PE=3 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 4.871e-159
Identity = 271/333 (81.38%), Postives = 285/333 (85.59%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAP---------LGTR-PPSMPPPQGFPGQQMQ 323
            MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP  PQPHKR +++++TVKIGRPGYRVTKQ+DP+TKQRSLLFQIEYPEIEDL+KPRHRFMSSYEQRVQPFDK YQYLLFAAEPYE ++FKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK KPPE  KPQPP  T NGT APGVPPRP+ P  QAP PPPP       P AP+GNPPRAPPPPMSGS PPPPPMAANGPRP     +P   P         +G R P   PPPQGF GQQMQ
Sbjct:    8 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPANPQPHKRNVSVRRTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPPTIT-NGTEAPGVPPRPLAPSPQAPPPPPPQGLP---PGAPMGNPPRAPPPPMSGSFPPPPPMAANGPRPAPPGGMPSIPPPPPSTANFNMGNRPPSMPPPPQGFLGQQMQ 336          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4PWK5|A0A6A4PWK5_LUPAL (Putative matrin/U1-C, C2H2-type zinc finger, Zinc finger C2H2-type, SF3A2 domain-containing protein OS=Lupinus albus OX=3870 GN=Lalb_Chr10g0099851 PE=3 SV=1)

HSP 1 Score: 456.447 bits (1173), Expect = 1.338e-158
Identity = 271/333 (81.38%), Postives = 285/333 (85.59%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAP---------LGTR-PPSMPPPQGFPGQQMQ 323
            MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP  PQPHKR +++++TVKIGRPGYRVTKQ+DP+TKQRSLLFQIEYPEIEDL+KPRHRFMSSYEQRVQPFDK YQYLLFAAEPYE ++FKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK KPPE  KPQPP  T NGT APGVPPRP+ P  QAP PPPP       P AP+GNPPRAPPPPMSGS PPPPPMAANGPRP     +P   P         +G R P   PPPQGF GQQMQ
Sbjct:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPANPQPHKRNVSVRRTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPPTIT-NGTEAPGVPPRPLAPSPQAPPPPPPQGLP---PGAPMGNPPRAPPPPMSGSFPPPPPMAANGPRPAPPGGMPSIPPPPPSTANFNMGNRPPSMPPPPQGFLGQQMQ 329          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NA90|A0A2Z6NA90_TRISU (Matrin-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_353790 PE=3 SV=1)

HSP 1 Score: 448.743 bits (1153), Expect = 2.413e-155
Identity = 233/265 (87.92%), Postives = 233/265 (87.92%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQ------------------------------IEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGV 235
            MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQ                              IEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK KPPE TKPQPPASTPNGTTAPGV
Sbjct:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQDRENIMIGMKALERKLGSTYCGKDGWNAYLIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEATKPQPPASTPNGTTAPGV 265          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7GPB1|A0A1J7GPB1_LUPAN (Matrin-type domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_15143 PE=3 SV=1)

HSP 1 Score: 447.588 bits (1150), Expect = 3.856e-155
Identity = 255/293 (87.03%), Postives = 268/293 (91.47%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRPG 293
            MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP  PQPHKR +++++TVKIGRPGYRVTKQ+DP+TKQRSLLFQIEYPEIEDL+KPRHRFMSSYEQRVQPFDK YQYLLFAAEPYE ++FKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK KPPE  KPQPP +  NGT APGVPPRP+ PP QAP PPPP       P AP+GNPPRAPPPPMSGS PPPPPMAANGPRP 
Sbjct:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPANPQPHKRNVSVRRTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPP-TIANGTEAPGVPPRPLAPPPQAPPPPPPQGLP---PGAPMGNPPRAPPPPMSGSFPPPPPMAANGPRPA 289          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5M8R2|A0A6A5M8R2_LUPAL (Putative matrin/U1-C-like, C2H2-type zinc finger, Zinc finger C2H2-type, SF3A2 OS=Lupinus albus OX=3870 GN=Lal_00048197 PE=3 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 6.314e-155
Identity = 271/330 (82.12%), Postives = 285/330 (86.36%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAP-------LGTRPPSMPPPQGFPGQQMQ 323
            MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP QPQPHKR ++++KTVKIGRPGYRVTKQ+D +TKQRSLLFQIEYPEIEDL+KPRHRFMSSYEQRVQPFDK YQYLLFAAEPYE ++FKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK KPPE  KPQPP ST NG  APGVPPRP+ PP QAP PPPP       P AP+GNP RAPPPPM GS+P PPPMAANGPRP     +P   P       +G RPP  PPPQGFP QQMQ
Sbjct:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRNVSVRKTVKIGRPGYRVTKQYDSETKQRSLLFQIEYPEIEDLSKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPP-STANGPEAPGVPPRPLAPPPQAPPPPPPQGLP---PGAPMGNPARAPPPPMPGSLPAPPPMAANGPRPAPPSGMPSIPPPPPSSFNMGVRPPM-PPPQGFPSQQMQ 325          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GM23|A0A445GM23_GLYSO (Splicing factor 3A subunit 2 isoform A OS=Glycine soja OX=3848 GN=D0Y65_039581 PE=3 SV=1)

HSP 1 Score: 439.884 bits (1130), Expect = 5.577e-152
Identity = 285/335 (85.07%), Postives = 296/335 (88.36%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRP---GAMPPLPPPAP---------LGTRPPSMPPPQGFPGQQMQ 323
            MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP QPQPHKRK+ L+KTVKIGRPGYRVTKQ+DP+TKQRSLLFQIEYPEIEDL KPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYE ++FKVPSTEIDKSTP FFSHWDPDSKMFTLQLYFK KPPE  KPQ PAST NGT   GVPPRP+PPP Q PLPPPPPPPQGLPP AP+ NPPRAPPPPM GSMPPPP  A NGPRP   G MP +PPP P         +G RPPSMPPPQGFP Q MQ
Sbjct:    1 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLRKTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFKVPSTEIDKSTPNFFSHWDPDSKMFTLQLYFKSKPPEANKPQ-PASTANGTAPSGVPPRPLPPPPQGPLPPPPPPPQGLPPGAPMANPPRAPPPPMPGSMPPPPMAATNGPRPAPSGGMPSIPPPPPVASGTSGFNMGARPPSMPPPQGFPSQPMQ 334          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|I1MCD5|I1MCD5_SOYBN (Matrin-type domain-containing protein OS=Glycine max OX=3847 GN=100818114 PE=3 SV=1)

HSP 1 Score: 439.884 bits (1130), Expect = 5.577e-152
Identity = 285/335 (85.07%), Postives = 296/335 (88.36%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRP---GAMPPLPPPAP---------LGTRPPSMPPPQGFPGQQMQ 323
            MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAP QPQPHKRK+ L+KTVKIGRPGYRVTKQ+DP+TKQRSLLFQIEYPEIEDL KPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYE ++FKVPSTEIDKSTP FFSHWDPDSKMFTLQLYFK KPPE  KPQ PAST NGT   GVPPRP+PPP Q PLPPPPPPPQGLPP AP+ NPPRAPPPPM GSMPPPP  A NGPRP   G MP +PPP P         +G RPPSMPPPQGFP Q MQ
Sbjct:    1 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLRKTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFKVPSTEIDKSTPNFFSHWDPDSKMFTLQLYFKSKPPEANKPQ-PASTANGTAPSGVPPRPLPPPPQGPLPPPPPPPQGLPPGAPMANPPRAPPPPMPGSMPPPPMAATNGPRPAPSGGMPSIPPPPPVASGTSGFNMGARPPSMPPPQGFPSQPMQ 334          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QLR5|A0A0B2QLR5_GLYSO (Splicing factor 3A subunit 2 OS=Glycine soja OX=3848 GN=glysoja_024934 PE=3 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.295e-151
Identity = 284/335 (84.78%), Postives = 296/335 (88.36%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRP---GAMPPLPPPAP---------LGTRPPSMPPPQGFPGQQMQ 323
            MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKD+P QPQPHKRK+ L+KTVKIGRPGYRVTKQ+DP+TKQRSLLFQIEYPEIEDL KPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYE ++FKVPSTEIDKSTP FFSHWDPDSKMFTLQLYFK KPPE  KPQ PAST NGT   GVPPRP+PPP Q PLPPPPPPPQGLPP AP+ NPPRAPPPPM GSMPPPP  A NGPRP   G MP +PPP P         +G RPPSMPPPQGFP Q MQ
Sbjct:    1 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDSPAQPQPHKRKVTLRKTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFKVPSTEIDKSTPNFFSHWDPDSKMFTLQLYFKSKPPEANKPQ-PASTANGTAPSGVPPRPLPPPPQGPLPPPPPPPQGLPPGAPMANPPRAPPPPMPGSMPPPPMAATNGPRPAPSGGMPSIPPPPPVASGTSGFNMGARPPSMPPPQGFPSQPMQ 334          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q15428|SF3A2_HUMAN (Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A2 PE=1 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.605e-92
Identity = 145/210 (69.05%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    6 GSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPP 215
            G K GSGG A++     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAK+AP QP P K K+ +KK VKIGRPGY+VTKQ D +  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYETI+FKVPS EIDK+  KF++HW+ ++K F LQ +FK++ P
Sbjct:    8 GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6AXT8|SF3A2_RAT (Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.897e-92
Identity = 145/210 (69.05%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    6 GSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPP 215
            G K GSGG A++     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAK+AP QP P K K+ +KK VKIGRPGY+VTKQ D +  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYETI+FKVPS EIDK+  KF++HW+ ++K F LQ +FK++ P
Sbjct:    8 GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGVMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/Swiss-Prot
Match: sp|A5PJN8|SF3A2_BOVIN (Splicing factor 3A subunit 2 OS=Bos taurus OX=9913 GN=SF3A2 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 4.536e-92
Identity = 145/210 (69.05%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    6 GSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPP 215
            G K GSGG A++     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAK+AP QP P K K+ +KK VKIGRPGY+VTKQ D +  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYETI+FKVPS EIDK+  KF++HW+ ++K F LQ +FK++ P
Sbjct:    8 GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q54B65|SF3A2_DICDI (Splicing factor 3A subunit 2 OS=Dictyostelium discoideum OX=44689 GN=sf3a2 PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.696e-90
Identity = 128/214 (59.81%), Postives = 169/214 (78.97%), Query Frame = 0
Query:    4 EWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPH---KRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKST---PKFFSHWDPDSKMFTLQLYFK 211
            E+G K GSGG  ++Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E ++ P+  + +     ++  KKT+KIGRPGY++ KQ D  T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYETI+FK+P+ EID++T    KFF+HWD + K FTLQLYFK
Sbjct:    3 EYG-KAGSGGLQSSQYDNIDRRERQKQLVLEHVDVSKDPYIISNHIGSFECRLCLTVHNNVGNYLAHTQGKKHQTHLARRAAKEQRENPSVSKNNYIQTTRVIHKKTIKIGRPGYKIIKQRDSKTGQLSLLFQIDYPEIESGLQPRHRIMSAFEQRVEQPNKDYQYLLFAAEPYETIAFKIPNKEIDRTTGPDGKFFTHWDRN-KTFTLQLYFK 214          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q62203|SF3A2_MOUSE (Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 2.658e-85
Identity = 141/210 (67.14%), Postives = 169/210 (80.48%), Query Frame = 0
Query:    6 GSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPP 215
            G K GSGG A++     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAK+AP QP P + K+ +KK VKIGRPGY+VTKQ D +  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYETI+FKVPS EIDK+  KF          F LQ +FK++ P
Sbjct:    8 GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEQVKVEVKKFVKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSREIDKAEGKF----------FFLQFHFKMEKP 207          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9P7L8|SAP62_SCHPO (Pre-mRNA-splicing factor sap62 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap62 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.138e-70
Identity = 111/216 (51.39%), Postives = 152/216 (70.37%), Query Frame = 0
Query:    6 GSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQ--------PQPHKRKLNLKKT-VKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKI 212
            G + G GG A  Q     RRERLR+LALETIDL+KDPY M+NHLG++EC+LCLT H NE +YL HTQGK+HQTNLA+R A E K +            Q H   + +KK+ VKIGRPGY+V+K  + ++ +  L FQI+YP+IE  AKPR+R MS+YEQRV+  D+++QYL+ AAEPYE+I+FK     ID++  KF+S+WD  +  +T+Q ++ +
Sbjct:    8 GVRFGGGGVAGYQETNAARRERLRKLALETIDLSKDPYLMKNHLGTFECRLCLTTHANENSYLTHTQGKKHQTNLARRQALENKKSQENAPQVLLGISQSH---VQVKKSVVKIGRPGYKVSKIREAESGKFGLRFQIKYPDIEVNAKPRYRIMSAYEQRVEAPDRKFQYLVVAAEPYESIAFK-----IDRAPGKFWSYWDAPT--YTIQFFYNL 213          
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. Araport11
Match: AT2G32600.1 (| hydroxyproline-rich glycoprotein family protein | Chr2:13833779-13835525 REVERSE LENGTH=277 | 201606)

HSP 1 Score: 375.17 bits (962), Expect = 3.751e-131
Identity = 202/254 (79.53%), Postives = 217/254 (85.43%), Query Frame = 0
Query:    1 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKRKLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPPPPPP 254
            MDREWGSKPGSGGAA+ QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPT+PQP KR +++++TVKIGRPGYRVTKQ+DP+ +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYE I+FKVPSTE+DKSTPKFFSHWDPDSKMFTLQ+YFK   PE  KPQ  A   NG   P                PPPPP
Sbjct:    1 MDREWGSKPGSGGAASGQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTKPQPLKRNVSVRRTVKIGRPGYRVTKQYDPELQQRSLLFQIEYPEIEDNIKPRHRFMSSYEQKVQPYDKSYQYLLFAAEPYEIIAFKVPSTEVDKSTPKFFSHWDPDSKMFTLQVYFKPTKPEPNKPQS-AVGANGLPPP----------------PPPPP 237          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A072TWV3|A0A072TWV3_MEDTR0.000e+096.60Putative Zinc finger, U1-type, SF3A2 domain-contai... [more]
tr|A0A1S2YUL6|A0A1S2YUL6_CICAR9.263e-16194.79splicing factor 3A subunit 2 OS=Cicer arietinum OX... [more]
tr|A0A6A5NXE9|A0A6A5NXE9_LUPAL4.871e-15981.38Matrin-type domain-containing protein (Fragment) O... [more]
tr|A0A6A4PWK5|A0A6A4PWK5_LUPAL1.338e-15881.38Putative matrin/U1-C, C2H2-type zinc finger, Zinc ... [more]
tr|A0A2Z6NA90|A0A2Z6NA90_TRISU2.413e-15587.92Matrin-type domain-containing protein OS=Trifolium... [more]
tr|A0A1J7GPB1|A0A1J7GPB1_LUPAN3.856e-15587.03Matrin-type domain-containing protein OS=Lupinus a... [more]
tr|A0A6A5M8R2|A0A6A5M8R2_LUPAL6.314e-15582.12Putative matrin/U1-C-like, C2H2-type zinc finger, ... [more]
tr|A0A445GM23|A0A445GM23_GLYSO5.577e-15285.07Splicing factor 3A subunit 2 isoform A OS=Glycine ... [more]
tr|I1MCD5|I1MCD5_SOYBN5.577e-15285.07Matrin-type domain-containing protein OS=Glycine m... [more]
tr|A0A0B2QLR5|A0A0B2QLR5_GLYSO1.295e-15184.78Splicing factor 3A subunit 2 OS=Glycine soja OX=38... [more]
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BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
sp|Q15428|SF3A2_HUMAN1.605e-9269.05Splicing factor 3A subunit 2 OS=Homo sapiens OX=96... [more]
sp|Q6AXT8|SF3A2_RAT1.897e-9269.05Splicing factor 3A subunit 2 OS=Rattus norvegicus ... [more]
sp|A5PJN8|SF3A2_BOVIN4.536e-9269.05Splicing factor 3A subunit 2 OS=Bos taurus OX=9913... [more]
sp|Q54B65|SF3A2_DICDI3.696e-9059.81Splicing factor 3A subunit 2 OS=Dictyostelium disc... [more]
sp|Q62203|SF3A2_MOUSE2.658e-8567.14Splicing factor 3A subunit 2 OS=Mus musculus OX=10... [more]
sp|Q9P7L8|SAP62_SCHPO2.138e-7051.39Pre-mRNA-splicing factor sap62 OS=Schizosaccharomy... [more]
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BLAST of Vfaba.Tiffany.R1.4g060520.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G32600.13.751e-13179.53| hydroxyproline-rich glycoprotein family protein ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 46..89
e-value: 3.1E-5
score: 25.5
NoneNo IPR availablePFAMPF12874zf-metcoord: 52..76
e-value: 1.2E-6
score: 28.7
NoneNo IPR availableGENE3D2.60.40.2690coord: 93..217
e-value: 1.6E-38
score: 133.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..316
NoneNo IPR availablePANTHERPTHR23205SPLICING FACTOR 3A SUBUNIT 2coord: 1..323
IPR031781SF3A2 domainPFAMPF16835SF3A2coord: 110..204
e-value: 2.5E-35
score: 120.7
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 52..82
score: 9.295713
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 48..82

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.4g060520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g060520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g060520.1; organism=Vicia faba; type=mRNA; length=975bp
ATGGACAGAGAATGGGGTTCAAAACCGGGAAGCGGCGGAGCCGCGACGGC
GCAAAACGAAGCAATAGACCGCCGTGAGCGTCTCCGACGACTAGCCCTCG
AAACCATAGATCTTGCAAAAGATCCATATTTCATGCGCAATCATCTCGGT
AGCTACGAGTGCAAACTCTGTTTAACTCTCCACAACAACGAAGGAAACTA
CCTCGCTCATACACAAGGCAAACGCCATCAAACCAATCTCGCTAAGCGTG
CTGCACGTGAGGCTAAAGATGCTCCTACTCAACCTCAACCTCATAAGCGG
AAGCTTAACCTTAAGAAAACTGTTAAGATTGGGCGTCCTGGTTACCGTGT
GACTAAACAATTTGATCCTGATACTAAGCAAAGATCACTCCTTTTTCAGA
TTGAATATCCTGAGATTGAAGACCTTGCAAAGCCTAGGCATCGATTTATG
TCCTCCTATGAGCAGAGGGTGCAACCATTTGATAAAAGATATCAGTATCT
CTTGTTTGCAGCTGAACCATATGAAACAATTTCTTTCAAGGTGCCTAGCA
CAGAGATTGACAAGTCCACTCCAAAGTTTTTCTCGCATTGGGACCCAGAT
TCCAAGATGTTTACGCTGCAGTTGTATTTTAAAATCAAGCCACCAGAGGT
AACCAAACCACAGCCACCTGCCTCTACACCCAATGGCACCACAGCACCTG
GTGTTCCTCCAAGGCCAATGCCCCCACCATCACAAGCTCCATTACCACCA
CCACCTCCTCCTCCACAAGGGCTGCCTCCCGCCGCACCTTTGGGAAATCC
TCCTCGGGCCCCTCCACCTCCAATGTCAGGATCAATGCCACCACCACCTC
CTATGGCTGCAAACGGTCCTAGACCCGGTGCAATGCCACCTCTTCCACCT
CCAGCTCCCCTGGGTACTCGACCTCCATCAATGCCACCTCCACAAGGTTT
TCCAGGCCAACAAATGCAGAGCTAG
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protein sequence of Vfaba.Tiffany.R1.4g060520.1_tif_v1

>Vfaba.Tiffany.R1.4g060520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g060520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g060520.1_tif_v1; organism=Vicia faba; type=polypeptide; length=324bp
MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLG
SYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTQPQPHKR
KLNLKKTVKIGRPGYRVTKQFDPDTKQRSLLFQIEYPEIEDLAKPRHRFM
SSYEQRVQPFDKRYQYLLFAAEPYETISFKVPSTEIDKSTPKFFSHWDPD
SKMFTLQLYFKIKPPEVTKPQPPASTPNGTTAPGVPPRPMPPPSQAPLPP
PPPPPQGLPPAAPLGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPP
PAPLGTRPPSMPPPQGFPGQQMQS
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mRNA from alignment at chr4:470665090..470668121-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.4g060520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g060520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g060520.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:470665090..470668121- (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR031781SF3A2_dom
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus