Vfaba.Tiffany.R1.4g138520.1

Transcript Overview
NameVfaba.Tiffany.R1.4g138520.1
Unique NameVfaba.Tiffany.R1.4g138520.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length735
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:1199275100..1199276126 +Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR401Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL069Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL605Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL637Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cctifL0454Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL757Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
tiftifL054Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifL347Pisum sativum Cameor genome v1aPisum sativum
pstifL373Pisum sativum Cameor genome v1aPisum sativum
pvtifL373Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvtifL860Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvfhR292Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhR310Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR511Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR566Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
antifL0037Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0038Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0242Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL456Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0349Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0397Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR504Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR511Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR442Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR486Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR526Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL569Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_003616Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004508349.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun03g364900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr03.1780Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cr_19571.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Phvul.003G173400.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014652268.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan01g250300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_10690.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_06741Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_26218Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg19640.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.4g182960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g138520Vfaba.Tiffany.R1.4g138520_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g138520.1_tif_v1-exonVfaba.Tiffany.R1.4g138520.1_tif_v1-exon-chr4_tif_v1:1199275100..1199275289Vicia fabaexon
Vfaba.Tiffany.R1.4g138520.1_tif_v1-exonVfaba.Tiffany.R1.4g138520.1_tif_v1-exon-chr4_tif_v1:1199275383..1199275514Vicia fabaexon
Vfaba.Tiffany.R1.4g138520.1_tif_v1-exonVfaba.Tiffany.R1.4g138520.1_tif_v1-exon-chr4_tif_v1:1199275629..1199275837Vicia fabaexon
Vfaba.Tiffany.R1.4g138520.1_tif_v1-exonVfaba.Tiffany.R1.4g138520.1_tif_v1-exon-chr4_tif_v1:1199275923..1199276126Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g138520.1_tif_v1-cdsVfaba.Tiffany.R1.4g138520.1_tif_v1-cds-chr4_tif_v1:1199275100..1199275289Vicia fabaCDS
Vfaba.Tiffany.R1.4g138520.1_tif_v1-cdsVfaba.Tiffany.R1.4g138520.1_tif_v1-cds-chr4_tif_v1:1199275383..1199275514Vicia fabaCDS
Vfaba.Tiffany.R1.4g138520.1_tif_v1-cdsVfaba.Tiffany.R1.4g138520.1_tif_v1-cds-chr4_tif_v1:1199275629..1199275837Vicia fabaCDS
Vfaba.Tiffany.R1.4g138520.1_tif_v1-cdsVfaba.Tiffany.R1.4g138520.1_tif_v1-cds-chr4_tif_v1:1199275923..1199276126Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g138520.1_tif_v1Vfaba.Tiffany.R1.4g138520.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.4g138520.1_tif_v1Vfaba.Tiffany.R1.4g138520.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|G7JGN3|G7JGN3_MEDTR (Chlororespiratory reduction protein OS=Medicago truncatula OX=3880 GN=11438187 PE=4 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 2.967e-143
Identity = 210/243 (86.42%), Postives = 221/243 (90.95%), Query Frame = 0
Query:    2 ATTIRFKPLFPLSPLP-RQTNSPQTSWLSLPISRPFSHPRRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            +TTIRF+PL PLS    +QT SP TS+LSLPIS    H R  VAVSVAFNPQGNFDVSLFD+DDESKV PPMPPTEGRF VVIDND +S LDL+PFQAATGMKNPLSV+PQEFLERSIGF+INYTR DPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVM KVFIVYSWLKHHNIPKPE KAN+MARMLGFGIG ELYDLVENHPL+
Sbjct:    4 STTIRFRPLLPLSSPLPKQTTSPLTSFLSLPISH---HQRGNVAVSVAFNPQGNFDVSLFDEDDESKVSPPMPPTEGRFEVVIDNDAISRLDLTPFQAATGMKNPLSVRPQEFLERSIGFTINYTRPDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMNKVFIVYSWLKHHNIPKPELKANNMARMLGFGIGSELYDLVENHPLD 243          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P190|A0A2K3P190_TRIPR (Chlororespiratory reduction 6 protein OS=Trifolium pratense OX=57577 GN=L195_g005607 PE=4 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 1.049e-142
Identity = 218/246 (88.62%), Postives = 227/246 (92.28%), Query Frame = 0
Query:    1 MATTIRFKPLFPLSPLPRQTNSPQTSWLSLPISRPFSHPRRYVAVSVAFNPQGNFDVSLFDDDD--ESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLEE 244
            MATTIRFKPL PL+PLP+QTNS  TS LSLPISRP    RRYVAVSVAFNPQGNFDVSLFDDDD  ESKV PP+PPT+GRF+VVIDND +S LDLSPFQAATGMKNPLSVKP EFLERSIGF+INYTR DPRDPRELSEYPDIRLWFVRLDA YPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVM KVFIVYSWLKHHNIPKPE KAN+MARMLGFGIG ELYDLVEN+PLEE
Sbjct:    1 MATTIRFKPLLPLTPLPKQTNSSLTSCLSLPISRP----RRYVAVSVAFNPQGNFDVSLFDDDDDDESKVSPPLPPTKGRFDVVIDNDTISRLDLSPFQAATGMKNPLSVKPHEFLERSIGFTINYTRPDPRDPRELSEYPDIRLWFVRLDATYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMNKVFIVYSWLKHHNIPKPELKANNMARMLGFGIGGELYDLVENYPLEE 242          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YQM6|A0A1S2YQM6_CICAR (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cicer arietinum OX=3827 GN=LOC101508703 PE=4 SV=1)

HSP 1 Score: 402.905 bits (1034), Expect = 2.828e-140
Identity = 209/246 (84.96%), Postives = 223/246 (90.65%), Query Frame = 0
Query:    1 MATTIRFKPLFPLSPLPRQTNSPQTSWLSL-PISRP--FSHPRRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            MATT+RFKPL PLSPLP+QTNSP TS  S  PI  P    H R  V+V VAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRF+V+IDND ++ LDLS FQ+ATGMKNPLSVKPQEFL+RSIGF+INYTRQDPRDPRELSE+PDIRLWFVRLDA YPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKP+ K NDMARMLGFGIG ELYDL+ENHPL+
Sbjct:    1 MATTVRFKPLLPLSPLPKQTNSPLTSCFSCKPIFDPRVLFHHRPNVSVYVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFDVLIDNDVIARLDLSSFQSATGMKNPLSVKPQEFLDRSIGFTINYTRQDPRDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPKLKTNDMARMLGFGIGDELYDLLENHPLD 246          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|I3T0A0|I3T0A0_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 1.134e-139
Identity = 206/238 (86.55%), Postives = 216/238 (90.76%), Query Frame = 0
Query:    2 ATTIRFKPLFPLSPLP-RQTNSPQTSWLSLPISRPFSHPRRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVE 238
            +TTIRF+PL PLS    +QT SP TS+LSLPIS    H R  VAVSVAFNPQGNFDVSLFD+DDESKV PPMPPTEGRF VVIDND +S LDL+PFQAATGMKNPLSV+PQEFLERSIGF+INYTR DPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVM KVFIVYSWLKHHNIPKPE KAN+MARMLGFGIG ELYDLVE
Sbjct:    4 STTIRFRPLLPLSSPLPKQTTSPLTSFLSLPISH---HQRGNVAVSVAFNPQGNFDVSLFDEDDESKVSPPMPPTEGRFEVVIDNDAISRLDLTPFQAATGMKNPLSVRPQEFLERSIGFTINYTRPDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMNKVFIVYSWLKHHNIPKPELKANNMARMLGFGIGSELYDLVE 238          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4P1R286|A0A4P1R286_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26218 PE=4 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 2.431e-132
Identity = 191/250 (76.40%), Postives = 214/250 (85.60%), Query Frame = 0
Query:    1 MATTIRF-KPLFPLSPLPRQTNSPQTSWLSLPISRPFS------HPRRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            MATTI+F KPL PLS   + T SP +     PIS  FS      + R  V+VSVAFNPQGNFD+SLFD+DD+SK  PPMPP EGRF VVIDN+ +S LDLSPFQAATGMK+PLSVKP++FL+R+IGF+INY ++DPRDPRELSE+PDIRLWFVRLDA YPWLPVLLDWR+GELARYAAMLVPHQMNMKMGVVFNPEALELF MKKVFIVYSWLKHHNIPKP+ K NDMARMLGFGIG ELYDL+ENHPL+
Sbjct:    1 MATTIKFNKPLLPLST--QTTPSPISCLSCKPIS--FSRASASVYHRGNVSVSVAFNPQGNFDISLFDEDDQSKAAPPMPPAEGRFEVVIDNNVISRLDLSPFQAATGMKSPLSVKPKQFLDRTIGFTINYAKEDPRDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRSGELARYAAMLVPHQMNMKMGVVFNPEALELFAMKKVFIVYSWLKHHNIPKPKLKTNDMARMLGFGIGDELYDLIENHPLD 246          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|V7CDY1|V7CDY1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G173400g PE=4 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 6.381e-131
Identity = 188/245 (76.73%), Postives = 211/245 (86.12%), Query Frame = 0
Query:    2 ATTIRFKPLFPLSPLPRQTNSPQTS---WLSLPISRPFSHPRRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            AT I+ KPL PLS LP+ + S  +S    L+ PI  P  H R   AVSVA+NPQGNFD+SLF DDDE KV PP+PP+EGRF VVIDND ++ LDLSPFQAATGMK+PLSVKP++FLERSIGF+INYTR+DP DPRELSEYPDIR+WFVRLDA YPWLPVLLDWRAGELARYAAM+VPHQMN+KMG+VFNPEALELFVMKKVFIVYSWLKHHNIPKP+ KANDMARMLGF IG ELYD V+ HPL+
Sbjct:    4 ATPIKCKPLLPLSSLPKPSTSCFSSKPISLTSPIPPPL-HQRGPAAVSVAYNPQGNFDLSLFPDDDEPKVAPPLPPSEGRFEVVIDNDIITRLDLSPFQAATGMKSPLSVKPKDFLERSIGFTINYTREDPHDPRELSEYPDIRVWFVRLDATYPWLPVLLDWRAGELARYAAMMVPHQMNLKMGIVFNPEALELFVMKKVFIVYSWLKHHNIPKPKLKANDMARMLGFRIGDELYDFVDKHPLD 247          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4Q728|A0A6A4Q728_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00006682 PE=4 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 3.930e-127
Identity = 196/251 (78.09%), Postives = 215/251 (85.66%), Query Frame = 0
Query:    1 MATTIRF-KPLFPLSPLPRQTNSPQTSWLSL-PISRPFS------HPRRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            MATTI+F KPL PLSPLP QT     S LS  PIS  FS      + R  VAVSVAFNPQGNFD+SLFD+DDESK  PPMPP EGRF VVIDN+ +S LDL+PFQAA GMK+PLSVKP++FL+R+IGF+INY ++DPRDPRELSE+PDIRLWFVRLDA YPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVM KVFIVYSWLKHHNIPKP  K NDMARMLGFGIG ELYDL+E+HPL+
Sbjct:    1 MATTIKFNKPLLPLSPLPTQTTPSPISCLSCKPIS--FSRAAVAVYHRPNVAVSVAFNPQGNFDISLFDEDDESKAAPPMPPAEGRFEVVIDNNVISRLDLTPFQAAIGMKSPLSVKPKQFLDRTIGFTINYAKEDPRDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMNKVFIVYSWLKHHNIPKPRLKTNDMARMLGFGIGDELYDLIEDHPLD 249          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|K7M075|K7M075_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100810072 PE=4 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 2.713e-126
Identity = 197/250 (78.80%), Postives = 217/250 (86.80%), Query Frame = 0
Query:    1 MATT-IRFKPLFPLSPLPRQTNSPQTSWL-SLPISRPF--SHP---RRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            MATT I+ KPL PLS LP+    P TSWL   PIS PF  S P   R  VA+SV++NPQGNFD+SLFDDDDE+K  PP+PPTEGRF V IDND +S LDLSPFQAATGMK+PLSVKP+EFLER+IGF+INYTR+DPRDPRELSEYPDIR+WFVRLDA YPWLPVLLDWRAGELARYAAMLVPHQMN+KMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKP+ KANDMARMLGF IG ELYD ++ HPL+
Sbjct:    1 MATTPIKCKPLLPLSSLPK----PTTSWLFGKPISHPFPNSRPVYQRGNVAISVSYNPQGNFDLSLFDDDDETKAAPPLPPTEGRFEVAIDNDVISRLDLSPFQAATGMKSPLSVKPKEFLERTIGFTINYTREDPRDPRELSEYPDIRVWFVRLDATYPWLPVLLDWRAGELARYAAMLVPHQMNIKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPKLKANDMARMLGFTIGDELYDFIDKHPLD 246          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445I5U2|A0A445I5U2_GLYSO (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_030903 PE=4 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.169e-126
Identity = 194/249 (77.91%), Postives = 215/249 (86.35%), Query Frame = 0
Query:    1 MATTIRFKPLFPLSPLPRQTNSPQTSWL-SLPISRPF--SHP---RRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            + T I+ KPL PLS LP+    P TSWL   PIS PF  S P   R  VA+SV++NPQGNFD+SLFDDDDE+K  PP+PPTEGRF V IDND +S LDLSPFQAATGMK+PLSVKP+EFLER+IGF+INYTR+DPRDPRELSEYPDIR+WFVRLDA YPWLPVLLDWRAGELARYAAMLVPHQMN+KMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKP+ KANDMARMLGF IG ELYD ++ HPL+
Sbjct:    2 VTTPIKCKPLLPLSSLPK----PTTSWLFCKPISHPFPNSRPVYQRGNVAISVSYNPQGNFDLSLFDDDDETKAAPPLPPTEGRFEVAIDNDVISRLDLSPFQAATGMKSPLSVKPKEFLERTIGFTINYTREDPRDPRELSEYPDIRVWFVRLDATYPWLPVLLDWRAGELARYAAMLVPHQMNIKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPKLKANDMARMLGFTIGDELYDFIDKHPLD 246          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Match: tr|I3T4I7|I3T4I7_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 7.025e-126
Identity = 176/222 (79.28%), Postives = 198/222 (89.19%), Query Frame = 0
Query:   27 WLSLPIS-----RPFSHPRRYVAVSVAFNPQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLE 243
            WLS P++     R     R +VAVSVAFNPQGNFD+SL D DD  +V PPMPP+EGRF+V IDND ++ LDLSPFQ+ATGMK+PLSVKP+EF++R+IGF+INY ++DPRDPRELSE+PDIRLWFVRLDA YPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVF+VYSWLKHHNIPKPE KAN+MARMLGFGIG ELYDLVENHPL+
Sbjct:   29 WLSNPLASFRTPRTMLSQRGHVAVSVAFNPQGNFDLSLSDYDDAPEVTPPMPPSEGRFDVFIDNDAITRLDLSPFQSATGMKDPLSVKPKEFIDRTIGFTINYKKEDPRDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFVVYSWLKHHNIPKPELKANNMARMLGFGIGNELYDLVENHPLD 250          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/Swiss-Prot
Match: sp|O82258|CRR6_ARATH (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 6.818e-104
Identity = 144/202 (71.29%), Postives = 171/202 (84.65%), Query Frame = 0
Query:   43 VAVSVAFNPQGNFDVSLFDDD-DESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLS---VKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENH 240
            VAVSVAFNP GNFD+S F++D D  KVEPPMPPT GR+ VVIDND +  LDLSPFQ A G+ +P      +P+ +L+R+IGF+INY R+DP DPRELSEYPD+RLWFVRLDA YPWLP+LLDWRAGELARYAAMLVPHQM+++MGVVFNPEALELFVM KVF+VY WLK H +PKP  K +DMARMLGFGIG EL+DL++++
Sbjct:   44 VAVSVAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 245          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. Araport11
Match: AT2G47910.1 (| chlororespiratory reduction 6 | Chr2:19614741-19615559 FORWARD LENGTH=246 | 201606)

HSP 1 Score: 304.294 bits (778), Expect = 6.976e-105
Identity = 144/202 (71.29%), Postives = 171/202 (84.65%), Query Frame = 0
Query:   43 VAVSVAFNPQGNFDVSLFDDD-DESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLS---VKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENH 240
            VAVSVAFNP GNFD+S F++D D  KVEPPMPPT GR+ VVIDND +  LDLSPFQ A G+ +P      +P+ +L+R+IGF+INY R+DP DPRELSEYPD+RLWFVRLDA YPWLP+LLDWRAGELARYAAMLVPHQM+++MGVVFNPEALELFVM KVF+VY WLK H +PKP  K +DMARMLGFGIG EL+DL++++
Sbjct:   44 VAVSVAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 245          
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. Araport11
Match: AT2G47910.2 (| chlororespiratory reduction 6 | Chr2:19614963-19615559 FORWARD LENGTH=198 | 201606)

HSP 1 Score: 275.404 bits (703), Expect = 2.460e-94
Identity = 128/180 (71.11%), Postives = 152/180 (84.44%), Query Frame = 0
Query:   64 DESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAATGMKNPLS---VKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDAAYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENH 240
            D  KVEPPMPPT GR+ VVIDND +  LDLSPFQ A G+ +P      +P+ +L+R+IGF+INY R+DP DPRELSEYPD+RLWFVRLDA YPWLP+LLDWRAGELARYAAMLVPHQM+++MGVVFNPEALELFVM KVF+VY WLK H +PKP  K +DMARMLGFGIG EL+DL++++
Sbjct:   18 DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 197          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7JGN3|G7JGN3_MEDTR2.967e-14386.42Chlororespiratory reduction protein OS=Medicago tr... [more]
tr|A0A2K3P190|A0A2K3P190_TRIPR1.049e-14288.62Chlororespiratory reduction 6 protein OS=Trifolium... [more]
tr|A0A1S2YQM6|A0A1S2YQM6_CICAR2.828e-14084.96protein CHLORORESPIRATORY REDUCTION 6, chloroplast... [more]
tr|I3T0A0|I3T0A0_MEDTR1.134e-13986.55Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A4P1R286|A0A4P1R286_LUPAN2.431e-13276.40Uncharacterized protein OS=Lupinus angustifolius O... [more]
tr|V7CDY1|V7CDY1_PHAVU6.381e-13176.73Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A6A4Q728|A0A6A4Q728_LUPAL3.930e-12778.09Uncharacterized protein OS=Lupinus albus OX=3870 G... [more]
tr|K7M075|K7M075_SOYBN2.713e-12678.80Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445I5U2|A0A445I5U2_GLYSO6.169e-12677.91Protein CHLORORESPIRATORY REDUCTION 6, chloroplast... [more]
tr|I3T4I7|I3T4I7_LOTJA7.025e-12679.28Uncharacterized protein OS=Lotus japonicus OX=3430... [more]
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BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|O82258|CRR6_ARATH6.818e-10471.29Protein CHLORORESPIRATORY REDUCTION 6, chloroplast... [more]
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BLAST of Vfaba.Tiffany.R1.4g138520.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G47910.16.976e-10571.29| chlororespiratory reduction 6 | Chr2:19614741-19... [more]
AT2G47910.22.460e-9471.11| chlororespiratory reduction 6 | Chr2:19614963-19... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014946Protein chlororespiratory reduction 6PFAMPF08847Crr6coord: 83..236
e-value: 7.0E-59
score: 197.8
IPR014946Protein chlororespiratory reduction 6PANTHERPTHR35724PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTICcoord: 33..243

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.4g138520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g138520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g138520.1; organism=Vicia faba; type=mRNA; length=735bp
ATGGCTACAACTATCAGATTCAAACCATTGTTTCCACTATCTCCTTTGCC
TAGACAAACCAATTCTCCTCAAACTTCATGGCTTTCCCTTCCAATTTCTC
GTCCTTTCTCTCATCCACGTAGATATGTTGCAGTTTCTGTTGCCTTCAAC
CCACAAGGAAACTTCGATGTCTCTTTATTTGATGATGATGATGAATCTAA
AGTTGAACCTCCTATGCCTCCAACTGAAGGAAGATTCAATGTTGTAATTG
ATAATGATGATGTTAGTAGTCTTGACTTGTCCCCTTTTCAAGCTGCAACC
GGCATGAAAAATCCATTATCTGTAAAACCGCAAGAGTTTCTTGAGCGTTC
TATTGGCTTTAGCATCAACTATACGAGACAAGATCCTCGCGATCCTCGTG
AGTTATCGGAGTATCCGGATATTAGACTGTGGTTTGTGAGACTTGATGCT
GCTTATCCTTGGTTGCCAGTTTTGTTGGACTGGAGAGCTGGTGAGCTAGC
TCGGTATGCTGCTATGTTAGTTCCACACCAGATGAATATGAAAATGGGAG
TTGTTTTTAATCCAGAAGCATTGGAATTGTTTGTTATGAAGAAAGTTTTT
ATTGTGTATTCATGGTTGAAGCATCACAACATTCCCAAGCCAGAATCAAA
GGCAAATGATATGGCAAGAATGCTTGGATTTGGAATTGGATATGAACTAT
ATGACTTAGTTGAAAATCATCCACTTGAAGAGTAA
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protein sequence of Vfaba.Tiffany.R1.4g138520.1_tif_v1

>Vfaba.Tiffany.R1.4g138520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g138520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g138520.1_tif_v1; organism=Vicia faba; type=polypeptide; length=244bp
MATTIRFKPLFPLSPLPRQTNSPQTSWLSLPISRPFSHPRRYVAVSVAFN
PQGNFDVSLFDDDDESKVEPPMPPTEGRFNVVIDNDDVSSLDLSPFQAAT
GMKNPLSVKPQEFLERSIGFSINYTRQDPRDPRELSEYPDIRLWFVRLDA
AYPWLPVLLDWRAGELARYAAMLVPHQMNMKMGVVFNPEALELFVMKKVF
IVYSWLKHHNIPKPESKANDMARMLGFGIGYELYDLVENHPLEE
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mRNA from alignment at chr4:1199275100..1199276126+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.4g138520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g138520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g138520.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:1199275100..1199276126+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR014946CRR6