Vfaba.Tiffany.R1.4g179400.1

Transcript Overview


Name	Vfaba.Tiffany.R1.4g179400.1
Unique Name	Vfaba.Tiffany.R1.4g179400.1_tif_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	297

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr4	chromosome	chr4:1532898599..1532898895 -	Vicia faba cv. Tiffany genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba cv. Tiffany genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11	2023-05-10

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
tifzwsR408	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
astifL139	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
astifL608	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
catifL426	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL518	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cctifL0842	Cajanus cajan Asha genome v1.0	Cajanus cajan
crtifL543	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crtifL636	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crtifL637	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pvtifL172	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pstifL529	Pisum sativum Cameor genome v1a	Pisum sativum
pstifL532	Pisum sativum Cameor genome v1a	Pisum sativum
pvtifL850	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvuR485	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvfhR312	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvuR571	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caitifL607	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
antifL0405	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL0765	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL1146	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
tifvrvR479	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvrvR499	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvuaR418	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvuaR475	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR533	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cantifL367	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cantifL456	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
Psat05G0005300-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.4g179400	Vfaba.Tiffany.R1.4g179400_tif_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.4g179400.1_tif_v1-exon	Vfaba.Tiffany.R1.4g179400.1_tif_v1-exon-chr4_tif_v1:1532898599..1532898895	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.4g179400.1_tif_v1-cds	Vfaba.Tiffany.R1.4g179400.1_tif_v1-cds-chr4_tif_v1:1532898599..1532898895	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.4g179400.1_tif_v1	Vfaba.Tiffany.R1.4g179400.1_tif_v1	Vicia faba	polypeptide
Vfaba.Tiffany.R1.4g179400.1_tif_v1	Vfaba.Tiffany.R1.4g179400.1_tif_v1-protein	Vicia faba	polypeptide

Homology

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BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392NJ94|A0A392NJ94_9FABA (Auxin-induced protein OS=Trifolium medium OX=97028 GN=A2U01_0020199 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.973e-52
Identity = 81/92 (88.04%), Postives = 84/92 (91.30%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF L G RR SF+ASQSSSKEVEVPKGYLAVYVGEK +RFLIP+SFLNEP FQE LSQAEEEFGY HPMGGLTIPCKEDVFLHTASRLNGL
Sbjct:    1 MGFRLSGTRRPSFTASQSSSKEVEVPKGYLAVYVGEKMKRFLIPVSFLNEPSFQEFLSQAEEEFGYCHPMGGLTIPCKEDVFLHTASRLNGL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|G7JAR1|G7JAR1_MEDTR (Putative small auxin-up RNA OS=Medicago truncatula OX=3880 GN=11438950 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.574e-51
Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LPGIRRSSF+A QSSSK++EVPKGYLAVYVGE+ +RFLIP++FLNEPLFQELLSQAEEEFGY H MGGLTIPCKEDVFL T SRLNGL
Sbjct:    1 MGFRLPGIRRSSFTAGQSSSKQMEVPKGYLAVYVGEEMKRFLIPVAFLNEPLFQELLSQAEEEFGYCHQMGGLTIPCKEDVFLRTTSRLNGL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y8Z8|A0A1S2Y8Z8_CICAR (auxin-induced protein X10A-like OS=Cicer arietinum OX=3827 GN=LOC101502027 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.223e-50
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LPGIRRSSFSASQ+S KE EVPKGYLAVYVGE+ +RFLIP+SFLN+P FQELLSQAEEEFGY HPMGGLTIPCKEDVFL T SRLN L
Sbjct:    1 MGFRLPGIRRSSFSASQASIKETEVPKGYLAVYVGEEMKRFLIPVSFLNQPSFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLQTTSRLNKL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7Y0Q7|A0A3Q7Y0Q7_CICAR (auxin-induced protein X10A-like OS=Cicer arietinum OX=3827 GN=LOC113786731 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.381e-49
Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LP IRRSSFSASQ+S KE EVPKGYLAVYVGE+ +RFLIP+SFLN+P FQELLSQAEEEFGY HPMGGLTIPCKEDVFL T S+LN L
Sbjct:    1 MGFRLPSIRRSSFSASQASIKETEVPKGYLAVYVGEEIKRFLIPVSFLNQPSFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLQTTSQLNKL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445HK80|A0A445HK80_GLYSO (Auxin-induced protein X10A OS=Glycine soja OX=3848 GN=D0Y65_033252 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.248e-48
Identity = 72/92 (78.26%), Postives = 82/92 (89.13%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LPGIRRSSF+ ++++SK VEVPKGYLAVYVGEK +RF+IPIS+LN+PLFQ+LLSQAEEEFGY HPMGGLTIPC ED FL   SRLNGL
Sbjct:    1 MGFRLPGIRRSSFAVTKAASKAVEVPKGYLAVYVGEKMKRFVIPISYLNQPLFQQLLSQAEEEFGYDHPMGGLTIPCSEDAFLDLTSRLNGL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R4J4Q2|A0A0R4J4Q2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100806671 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.248e-48
Identity = 72/92 (78.26%), Postives = 82/92 (89.13%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LPGIRRSSF+ ++++SK VEVPKGYLAVYVGEK +RF+IPIS+LN+PLFQ+LLSQAEEEFGY HPMGGLTIPC ED FL   SRLNGL
Sbjct:    1 MGFRLPGIRRSSFAVTKAASKAVEVPKGYLAVYVGEKMKRFVIPISYLNQPLFQQLLSQAEEEFGYDHPMGGLTIPCSEDAFLDLTSRLNGL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3KQU9|A0A2K3KQU9_TRIPR (Auxin-induced protein 6B OS=Trifolium pratense OX=57577 GN=L195_g056283 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.379e-48
Identity = 77/92 (83.70%), Postives = 82/92 (89.13%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LPGIRRSS      SSK++EVPKGYLAVYVGEK +RFLIP+SFLNEPLFQELLSQ+EEEFGYSHPMGGLTIPC EDVFLHTASRLN L
Sbjct:    1 MGFRLPGIRRSS------SSKQMEVPKGYLAVYVGEKMKRFLIPVSFLNEPLFQELLSQSEEEFGYSHPMGGLTIPCNEDVFLHTASRLNNL 86

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LXL5|A0A2Z6LXL5_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_310170 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.439e-48
Identity = 79/92 (85.87%), Postives = 81/92 (88.04%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LPGIRRSS      SSK+VEVPKGYLAVYVGEK +RFLIPISFLNEPLFQELLSQAEEEFGY HPMGGLTIPCKEDVFLHTAS LN L
Sbjct:    1 MGFRLPGIRRSS------SSKQVEVPKGYLAVYVGEKMKRFLIPISFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLHTASCLNNL 86

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y7U0|A0A1S2Y7U0_CICAR (auxin-induced protein 6B-like OS=Cicer arietinum OX=3827 GN=LOC101504925 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.731e-47
Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LP IRR+SF+ SQ SSK V VPKGYLAVYVGEK +RF+IP+S+LN+P FQ+LLSQAEEEFGY HPMGGLTIPC+EDVFLH  SR NGL
Sbjct:    1 MGFRLPTIRRASFTGSQGSSKAVNVPKGYLAVYVGEKMKRFVIPMSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCREDVFLHVTSRFNGL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LTI2|A0A2Z6LTI2_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_310200 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.416e-47
Identity = 78/91 (85.71%), Postives = 80/91 (87.91%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNG 91
            MGF LPGIRRSS      SSK+V  PKGYLAVYVGEK +RFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTAS LNG
Sbjct:    1 MGFRLPGIRRSS------SSKQVAAPKGYLAVYVGEKMKRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASCLNG 85

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P33080|AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.157e-47
Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF LPGIR++S +A+Q+SSK VEVPKGYL VYVG+K RRFLIP+S+LN+P FQ+LL+QAEEEFGY HPMGGLTIPCKED FL   S LN L
Sbjct:    1 MGFRLPGIRKTSIAANQASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLNDL 92

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P33083|AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.848e-46
Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            MGF LPGIR++SFSA+Q+SSK V+V KGYLAVYVGEK RRF+IP+S+LN+P FQ+LLSQAEEEFGY HP GGLTIPC EDVF H  S LN
Sbjct:    1 MGFRLPGIRKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P33079|A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.399e-43
Identity = 65/93 (69.89%), Postives = 77/93 (82.80%), Query Frame = 0

Query:    1 MGFHLPGI-RRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGL 92
            MGF + GI RR+SF  +Q++SK V+VPKGY AVYVG+K RRF IP+S+LNEP FQELLSQAEEEFGY HPMGGLTIPCKE+ FL+  + LN L
Sbjct:    1 MGFRIAGIVRRTSFYTTQAASKRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNEL 93

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P32295|ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.299e-41
Identity = 60/91 (65.93%), Postives = 75/91 (82.42%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNG 91
            MGF LPGIR++  + +++SSK ++ PKGYLAVYVGE  +RF+IP+S LN+PLFQ+LLSQAEEEFGY HPMGGLTIPC ED+F H  S L+ 
Sbjct:    1 MGFRLPGIRKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSA 91

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P33081|AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.857e-38
Identity = 60/90 (66.67%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            MGF LPGIR++S        K  + PKGYLAVYVGEK +RF+IP+S+LN+P FQ+LLSQAEEEFGY HPMGGLTIPC EDVF    S LN
Sbjct:    1 MGFRLPGIRKAS--------KAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|P33082|AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.383e-36
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            MGF LPGIR++S          V+ PKGYLAVYVGEK +RF+IP+S++N+P FQ+LL+QAEEEFGY HPMGGLTIPC E+VF      LN
Sbjct:    1 MGFRLPGIRKAS--------NAVDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCLN 82

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FJG0|SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.536e-29
Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S++     PKG+LAVYVGE + +R+L+PIS+LN+P FQ LLS++EEEFG+ HPMGGLTIPC ED F++  SR  
Sbjct:   15 SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FK62|SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.239e-28
Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S+      PKG+LAVYVGE + +R+L+P+S+LN+P FQ LLS++EEEFG+ HPMGGLTIPC ED F++  SRL 
Sbjct:   15 SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FJF7|SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.838e-28
Identity = 44/76 (57.89%), Postives = 61/76 (80.26%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S++     PKG+LAVYVGE + +R+L+P+S+LN+P FQ LLS++E+EFG+ HPMGGLTIPC ED F++  SRL 
Sbjct:   15 SRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FJF6|SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.393e-28
Identity = 45/76 (59.21%), Postives = 62/76 (81.58%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S++     PKG+LAVYVGE + +R+L+P+S+LN+P FQ LLS++EEEFG+ HPMGGLTIPC ED F++  SRL+
Sbjct:   15 SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT2G21200.1 (| SAUR-like auxin-responsive protein family | Chr2:9084039-9084299 REVERSE LENGTH=86 | 201606)

HSP 1 Score: 104.375 bits (259), Expect = 1.199e-30
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 0

Query:   19 SSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRL 89
            +SK    PKG+LAVYVGE + +R+++P+SFLN+P FQ LLS AEEEFG+ HPMGGLTIPC ED F+  AS+L
Sbjct:   15 TSKAASTPKGFLAVYVGESQKKRYMVPVSFLNQPSFQALLSTAEEEFGFDHPMGGLTIPCPEDTFVAAASQL 86

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT4G38840.1 (| SAUR-like auxin-responsive protein family | Chr4:18125174-18125473 REVERSE LENGTH=99 | 201606)

HSP 1 Score: 103.605 bits (257), Expect = 2.780e-30
Identity = 49/84 (58.33%), Postives = 69/84 (82.14%), Query Frame = 0

Query:    8 IRRSSFSASQSSSKEVEVPKGYLAVYVGEK-ARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            +R++   +S SSS  ++VPKGYLAVYVGE+  +RF++P+S+L++P FQ+LL +AEEEFG+ HPMGGLTIPC E++F+  ASR N
Sbjct:   16 LRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT3G03820.1 (| SAUR-like auxin-responsive protein family | Chr3:976933-977223 REVERSE LENGTH=96 | 201606)

HSP 1 Score: 103.605 bits (257), Expect = 3.282e-30
Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 0

Query:   19 SSKEVEVPKGYLAVYVGE---KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNG 91
            + KE   PKG+LAVYVGE   K +R L+P+S+LN+PLFQ LL +AEEEFG++HPMGGLTIPC ED FL   S++ G
Sbjct:   21 TRKETSAPKGFLAVYVGESQRKKQRHLVPVSYLNQPLFQALLIKAEEEFGFNHPMGGLTIPCPEDTFLTVTSQIQG 96

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT2G21210.1 (| SAUR-like auxin-responsive protein family | Chr2:9085513-9085809 REVERSE LENGTH=98 | 201606)

HSP 1 Score: 102.834 bits (255), Expect = 5.813e-30
Identity = 45/74 (60.81%), Postives = 60/74 (81.08%), Query Frame = 0

Query:   19 SSKEVEVPKGYLAVYVGE--KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            SS  V +PKG+LAVYVGE  + RRF++P+++L+ P FQ+LL +AEEEFG+ HPMGGLTIPC E +F+  ASRL+
Sbjct:   22 SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLS 95

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT5G18020.1 (| SAUR-like auxin-responsive protein family | Chr5:5966305-5966580 REVERSE LENGTH=91 | 201606)

HSP 1 Score: 102.449 bits (254), Expect = 6.687e-30
Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S++     PKG+LAVYVGE + +R+L+PIS+LN+P FQ LLS++EEEFG+ HPMGGLTIPC ED F++  SR  
Sbjct:   15 SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT5G18080.1 (| SAUR-like auxin-responsive protein family | Chr5:5983840-5984112 FORWARD LENGTH=90 | 201606)

HSP 1 Score: 101.679 bits (252), Expect = 1.268e-29
Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S+      PKG+LAVYVGE + +R+L+P+S+LN+P FQ LLS++EEEFG+ HPMGGLTIPC ED F++  SRL 
Sbjct:   15 SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT3G03840.1 (| SAUR-like auxin-responsive protein family | Chr3:981258-981545 FORWARD LENGTH=95 | 201606)

HSP 1 Score: 101.679 bits (252), Expect = 1.461e-29
Identity = 49/93 (52.69%), Postives = 66/93 (70.97%), Query Frame = 0

Query:    1 MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGE--KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNG 91
            +G  L G+R+S+             PKG+LAVYVGE  K +R+L+ +S+L++PLFQ+LLS++EEEFG+ HPMGGLTIPC ED FL   SR+ G
Sbjct:   14 LGGSLAGMRKST-----------SAPKGFLAVYVGESQKKQRYLVLVSYLSQPLFQDLLSKSEEEFGFDHPMGGLTIPCPEDTFLTVTSRIQG 95

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT5G18050.1 (| SAUR-like auxin-responsive protein family | Chr5:5974691-5974963 REVERSE LENGTH=90 | 201606)

HSP 1 Score: 101.293 bits (251), Expect = 1.880e-29
Identity = 44/76 (57.89%), Postives = 61/76 (80.26%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S++     PKG+LAVYVGE + +R+L+P+S+LN+P FQ LLS++E+EFG+ HPMGGLTIPC ED F++  SRL 
Sbjct:   15 SRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT2G21210.2 (| SAUR-like auxin-responsive protein family | Chr2:9085513-9086010 REVERSE LENGTH=165 | 201606)

HSP 1 Score: 103.219 bits (256), Expect = 2.732e-29
Identity = 45/74 (60.81%), Postives = 60/74 (81.08%), Query Frame = 0

Query:   19 SSKEVEVPKGYLAVYVGE--KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            SS  V +PKG+LAVYVGE  + RRF++P+++L+ P FQ+LL +AEEEFG+ HPMGGLTIPC E +F+  ASRL+
Sbjct:   89 SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLS 162

[Close]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Match: AT5G18060.1 (| SAUR-like auxin-responsive protein family | Chr5:5976030-5976302 FORWARD LENGTH=90 | 201606)

HSP 1 Score: 100.523 bits (249), Expect = 3.471e-29
Identity = 45/76 (59.21%), Postives = 62/76 (81.58%), Query Frame = 0

Query:   16 SQSSSKEVEVPKGYLAVYVGE-KARRFLIPISFLNEPLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLN 90
            S+S++     PKG+LAVYVGE + +R+L+P+S+LN+P FQ LLS++EEEFG+ HPMGGLTIPC ED F++  SRL+
Sbjct:   15 SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90

The following BLAST results are available for this feature:

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A392NJ94\|A0A392NJ94_9FABA	1.973e-52	88.04	Auxin-induced protein OS=Trifolium medium OX=97028...	[more]
tr\|G7JAR1\|G7JAR1_MEDTR	2.574e-51	84.78	Putative small auxin-up RNA OS=Medicago truncatula...	[more]
tr\|A0A1S2Y8Z8\|A0A1S2Y8Z8_CICAR	1.223e-50	84.78	auxin-induced protein X10A-like OS=Cicer arietinum...	[more]
tr\|A0A3Q7Y0Q7\|A0A3Q7Y0Q7_CICAR	4.381e-49	82.61	auxin-induced protein X10A-like OS=Cicer arietinum...	[more]
tr\|A0A445HK80\|A0A445HK80_GLYSO	2.248e-48	78.26	Auxin-induced protein X10A OS=Glycine soja OX=3848...	[more]
tr\|A0A0R4J4Q2\|A0A0R4J4Q2_SOYBN	2.248e-48	78.26	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A2K3KQU9\|A0A2K3KQU9_TRIPR	5.379e-48	83.70	Auxin-induced protein 6B OS=Trifolium pratense OX=...	[more]
tr\|A0A2Z6LXL5\|A0A2Z6LXL5_TRISU	5.439e-48	85.87	Uncharacterized protein OS=Trifolium subterraneum ...	[more]
tr\|A0A1S2Y7U0\|A0A1S2Y7U0_CICAR	1.731e-47	77.17	auxin-induced protein 6B-like OS=Cicer arietinum O...	[more]
tr\|A0A2Z6LTI2\|A0A2Z6LTI2_TRISU	2.416e-47	85.71	Uncharacterized protein OS=Trifolium subterraneum ...	[more]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
sp\|P33080\|AX10A_SOYBN	1.157e-47	73.91	Auxin-induced protein X10A OS=Glycine max OX=3847 ...	[more]
sp\|P33083\|AX6B_SOYBN	5.848e-46	75.56	Auxin-induced protein 6B OS=Glycine max OX=3847 PE...	[more]
sp\|P33079\|A10A5_SOYBN	3.399e-43	69.89	Auxin-induced protein 10A5 OS=Glycine max OX=3847 ...	[more]
sp\|P32295\|ARG7_VIGRR	4.299e-41	65.93	Indole-3-acetic acid-induced protein ARG7 OS=Vigna...	[more]
sp\|P33081\|AX15A_SOYBN	1.857e-38	66.67	Auxin-induced protein 15A OS=Glycine max OX=3847 P...	[more]
sp\|P33082\|AXX15_SOYBN	1.383e-36	62.22	Auxin-induced protein X15 OS=Glycine max OX=3847 P...	[more]
sp\|Q9FJG0\|SAU20_ARATH	6.536e-29	59.21	Auxin-responsive protein SAUR20 OS=Arabidopsis tha...	[more]
sp\|Q9FK62\|SAU24_ARATH	1.239e-28	59.21	Auxin-responsive protein SAUR24 OS=Arabidopsis tha...	[more]
sp\|Q9FJF7\|SAU22_ARATH	1.838e-28	57.89	Auxin-responsive protein SAUR22 OS=Arabidopsis tha...	[more]
sp\|Q9FJF6\|SAU23_ARATH	3.393e-28	59.21	Auxin-responsive protein SAUR23 OS=Arabidopsis tha...	[more]

BLAST of Vfaba.Tiffany.R1.4g179400.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
AT2G21200.1	1.199e-30	63.89	\| SAUR-like auxin-responsive protein family \| Chr2...	[more]
AT4G38840.1	2.780e-30	58.33	\| SAUR-like auxin-responsive protein family \| Chr4...	[more]
AT3G03820.1	3.282e-30	61.84	\| SAUR-like auxin-responsive protein family \| Chr3...	[more]
AT2G21210.1	5.813e-30	60.81	\| SAUR-like auxin-responsive protein family \| Chr2...	[more]
AT5G18020.1	6.687e-30	59.21	\| SAUR-like auxin-responsive protein family \| Chr5...	[more]
AT5G18080.1	1.268e-29	59.21	\| SAUR-like auxin-responsive protein family \| Chr5...	[more]
AT3G03840.1	1.461e-29	52.69	\| SAUR-like auxin-responsive protein family \| Chr3...	[more]
AT5G18050.1	1.880e-29	57.89	\| SAUR-like auxin-responsive protein family \| Chr5...	[more]
AT2G21210.2	2.732e-29	60.81	\| SAUR-like auxin-responsive protein family \| Chr2...	[more]
AT5G18060.1	3.471e-29	59.21	\| SAUR-like auxin-responsive protein family \| Chr5...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 10..87 e-value: 4.0E-26 score: 91.0
IPR003676	Small auxin-up RNA	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 17..89

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:1532898599..1532898895-

mRNA sequence

>Vfaba.Tiffany.R1.4g179400.1_tif_v1 ID=Vfaba.Tiffany.R1.4g179400.1_tif_v1; Name=Vfaba.Tiffany.R1.4g179400.1; organism=Vicia faba; type=mRNA; length=297bp
ATGGGTTTTCACTTACCTGGTATTAGACGATCATCATTCAGTGCAAGCCA
ATCATCTAGCAAAGAAGTGGAAGTTCCAAAAGGCTATCTTGCAGTGTATG
TTGGAGAGAAAGCGAGGAGGTTCTTGATTCCAATATCATTCTTAAACGAG
CCTTTATTTCAAGAATTACTGAGTCAAGCTGAAGAGGAATTTGGTTACTC
TCATCCAATGGGTGGTCTAACCATTCCCTGCAAGGAAGATGTCTTCTTAC
ATACAGCATCTCGCTTAAATGGTCTACAATTAATTCATATTGAATAA

protein sequence of Vfaba.Tiffany.R1.4g179400.1_tif_v1

>Vfaba.Tiffany.R1.4g179400.1_tif_v1 ID=Vfaba.Tiffany.R1.4g179400.1_tif_v1; Name=Vfaba.Tiffany.R1.4g179400.1_tif_v1; organism=Vicia faba; type=polypeptide; length=98bp
MGFHLPGIRRSSFSASQSSSKEVEVPKGYLAVYVGEKARRFLIPISFLNE
PLFQELLSQAEEEFGYSHPMGGLTIPCKEDVFLHTASRLNGLQLIHIE

mRNA from alignment at chr4:1532898599..1532898895-

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Tiffany.R1.4g179400.1_tif_v1 ID=Vfaba.Tiffany.R1.4g179400.1_tif_v1; Name=Vfaba.Tiffany.R1.4g179400.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:1532898599..1532898895- (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Search form

Vfaba.Tiffany.R1.4g179400.1