Vfaba.Tiffany.R1.4g185520.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PAL2|A0A2K3PAL2_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g008950 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.655e-63 Identity = 122/203 (60.10%), Postives = 147/203 (72.41%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKENRT-----LKMKKVKR----ISRKLGFVDDWVLDSQ-EMKQSKKKVHPCSTRFRGELAKDSLCLSLV--EKTKNRLEEVDEGLTSYCS---------RKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSEEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKVS 182 MGA LCTLSG+S KDCIKPK+NRT K KK+++ I +K +DW+L S E++QSKK+VHPCSTRFRGEL KDSL L+L E+ K+R E+ EGLTS CS + NRVRFKLPHTVI+Y+PEE Y +D+EEE E LL YY SE+ SFSSP REL+SFET+EEPIL+LAVD LPHVFVSSK+S Sbjct: 1 MGANLCTLSGISLKDCIKPKQNRTRCAKIFKRKKIEKKILPIGKKFAPEEDWILSSSSEIRQSKKRVHPCSTRFRGELPKDSLNLTLCLKERMKSR-SEMGEGLTSDCSLVTRSFCEKSQKNRVRFKLPHTVIFYKPEEPY--REDDEEENEEALLMRYYSSEDDSFSSPKCRELFSFETSEEPILRLAVDVLPHVFVSSKIS 200
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MK28|A0A2Z6MK28_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_203360 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.518e-62 Identity = 125/203 (61.58%), Postives = 142/203 (69.95%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKENRTLKMKKVKR--ISRKLGFV--------DDWVLDSQ--EMKQSKKKVHPCSTRFRGELAKDSLCLSLVEKTKNRLEEVDEGLTSYCS---------RKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSEEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKVS 182 MGA LCT+SG+S KDCIKPK+NRT K KR I +K+ + +DW+L S EMKQSKK+VHPCSTRFR EL KDSLCL E+ K+R E DEGLTS CS K N VRFKLPHTVI+Y+PEE Y EE++ EE LL+ YY SEE SFSSP RELYSFET EEPIL+LAVD LPHVFVSSKVS Sbjct: 1 MGANLCTMSGISLKDCIKPKQNRTRCAKTFKRKKIEKKILPIGTKFSLEEEDWILSSSSSEMKQSKKRVHPCSTRFRAELPKDSLCLK--ERFKSRFGETDEGLTSDCSLVTRSFCEKSKKNSVRFKLPHTVIFYKPEEPYREEEENEE----ALLRRYYSSEEDSFSSPKCRELYSFETAEEPILRLAVDVLPHVFVSSKVS 197
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|G7JKI2|G7JKI2_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_4g133010 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 5.576e-54 Identity = 119/209 (56.94%), Postives = 136/209 (65.07%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKENRTLKMKKVKR--------ISRKLGFVDDWVLDSQEMKQSKKKVHPCSTRFRG-----ELAKDSLCLSLVEKTKN---RLEEVDEGLTSYCSRKIN---------RVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYD--SEEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKVS 182 MGAKLCTLSG KDCIKPK+N T K KR I + L ++W+L E+KQS+K+VHPCSTRF G ELA+DSLCL +EKTKN + E DEGLTS CS N RV FKLPHTVI+Y+PEE Y +E EEE E LK YY+ SEEYSFSS LYSFET EEP L+LAVD LP+VFVSSKVS Sbjct: 1 MGAKLCTLSGSCVKDCIKPKQNITRLTKTFKRKPEKNATTIDKNLALEEEWILSFPELKQSRKRVHPCSTRFCGGSLISELAQDSLCL--LEKTKNCREKEELADEGLTSNCSLITNNLFGKSQKKRVNFKLPHTVIFYKPEEPYCKE---EEEEEEASLKDYYNINSEEYSFSS-----LYSFETAEEPSLRLAVDILPYVFVSSKVS 199
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371EZ34|A0A371EZ34_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_49346 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.307e-22 Identity = 75/201 (37.31%), Postives = 109/201 (54.23%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKENRTLKM-----KKVKRISRKLG--FVDDWVLDSQEMKQ-----SKKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGLTSYCSRKIN--RVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE-EYSFSSPNWRELYSFETT--EEPILKLAVDTLPHVFVSSKV 181 MGA LC + L+ K + K +K++ +K+ ++D +L S +K S+KKVHPC T+FRG L AKDSLCL + ++ +E L C + ++ RV FKLPH +I+Y P+ + E+ E++ YY SE E SF S RE SF+++ EEPI +LAVD LPHV VSS++ Sbjct: 1 MGANLCVMCHLTSDQNSKSPNLKKEKFCNILERKIETAEKKVAKATLEDCILASPRLKPDYHYVSRKKVHPCVTQFRGSLIAEAKDSLCLDRPINMTHHHKQAEEML---CDKSLSQKRVTFKLPHILIFYSPDHPFSPEEQEQD--------PYYSSESEASFYSSICRE-NSFDSSAAEEPIFRLAVDILPHVTVSSRI 189
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R9E7|A0A0S3R9E7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G543100 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.423e-20 Identity = 80/216 (37.04%), Postives = 107/216 (49.54%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLG--FVDDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYE------PEESYYEEDDEEEERREGLLKAYYDS--EEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181 MGAKLC + + K C + + R LK +V+R +K+ ++DW++ S +K +KKVHPC ++ RG L KDSLCL ++ EE E L TS + RVRFKLPHTVIYY PEE+YY +E ++Y S EYSF+S + EEP L+LAVD LP V VSSK+ Sbjct: 1 MGAKLCIICYENSKACPRDGSDFKNERKQRGFCRILKRMEVERDEKKVRNLTLEDWIIASPGLKPGEGSFSSKNFQKKVHPCVSQRRGSLLTETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKSERRVRFKLPHTVIYYSLDEPCSPEETYYSSQIDE--------GSFYSSICREYSFNS----------SAEEPFLRLAVDILPLVSVSSKI 195
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TU26|A0A0L9TU26_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g324000 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.423e-20 Identity = 80/216 (37.04%), Postives = 107/216 (49.54%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLG--FVDDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYE------PEESYYEEDDEEEERREGLLKAYYDS--EEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181 MGAKLC + + K C + + R LK +V+R +K+ ++DW++ S +K +KKVHPC ++ RG L KDSLCL ++ EE E L TS + RVRFKLPHTVIYY PEE+YY +E ++Y S EYSF+S + EEP L+LAVD LP V VSSK+ Sbjct: 1 MGAKLCIICYENSKACPRDGSDFKNERKQRGFCRILKRMEVERDEKKVRNLTLEDWIIASPGLKPGEGSFSSKNFQKKVHPCVSQRRGSLLTETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKSERRVRFKLPHTVIYYSLDEPCSPEETYYSSQIDE--------GSFYSSICREYSFNS----------SAEEPFLRLAVDILPLVSVSSKI 195
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FBX8|A0A3Q0FBX8_VIGRR (uncharacterized protein LOC111242087 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC111242087 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.237e-17 Identity = 75/210 (35.71%), Postives = 104/210 (49.52%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLGFV--DDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE--EYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181 MGAKLC + + K C + + R LK +V+R +K+ ++ +DW+ S +K +KKVHPC ++ G L KDSLCL ++ EE E L TS + RVRFKLPHT+IYY + + E+ YY+S+ E SF S +E S + EEP L+LAVD LP V VSSK+ Sbjct: 26 MGAKLCIMCYENRKSCPRDGSDFKNERKQRGYCRILKRMEVEREEKKVRYLTLEDWIKASPGLKPCEGSFSSKNFQKKVHPCVSQSSGSLITETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKPERRVRFKLPHTIIYYSLDGPFSPEE------------TYYNSQIDEGSFYSSICKEYSSNSSAEEPFLRLAVDILPLVSVSSKI 220
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|V7C781|V7C781_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G083400g PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.010e-17 Identity = 78/216 (36.11%), Postives = 106/216 (49.07%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLG--FVDDWVLDSQEMKQ---------------SKKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGLTSYCSRKIN---RVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE-EYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181 MGAKLC L + K C++ N + LK ++V+R +K+ ++DW++ S +K SKKKVHPC ++ RG L KDSLCL +R DE + S+ S + RVRFKLPH VIYY P++ E+ AYY ++ E SF S E + EEP +LAVD LPHV VSSK+ Sbjct: 1 MGAKLCLLCHENNKACVRDDSNFKNEKKQGGFCKMLKRREVEREEKKVPNLTLEDWLIASPGLKAECIMSSGEVSFSSKHSKKKVHPCVSQCRGSLIAETKDSLCL-------DRPTNHDEEMVSWTSLSVKSQRRVRFKLPHIVIYYSPDDPCSPEE------------AYYSTQSEGSFYSSICGEYSIDSSAEEPFFRLAVDILPHVSVSSKI 197
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F8G7|A0A3Q0F8G7_VIGRR (uncharacterized protein LOC111242087 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC111242087 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.130e-17 Identity = 74/200 (37.00%), Postives = 102/200 (51.00%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKEN-RTLKMKKVKRISRKLGFV--DDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE--EYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181 +G K C G FK+ K + R LK +V+R +K+ ++ +DW+ S +K +KKVHPC ++ G L KDSLCL ++ EE E L TS + RVRFKLPHT+IYY + + E+ YY+S+ E SF S +E S + EEP L+LAVD LP V VSSK+ Sbjct: 46 IGRKSCPRDGSDFKNERKQRGYCRILKRMEVEREEKKVRYLTLEDWIKASPGLKPCEGSFSSKNFQKKVHPCVSQSSGSLITETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKPERRVRFKLPHTIIYYSLDGPFSPEE------------TYYNSQIDEGSFYSSICKEYSSNSSAEEPFLRLAVDILPLVSVSSKI 230
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KZR5|A0A4D6KZR5_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g102 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.118e-16 Identity = 80/222 (36.04%), Postives = 104/222 (46.85%), Query Frame = 0 Query: 1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLGFV--DDWV-----------LDSQEM----KQSKKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYE------PEESYYEEDDEEEERREGLLKAYYDS--EEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181 MGAKLC + + C + + R LK K+V+R +K+ V +DW+ + S EM K +KKVHPC ++ G L KDSLCL K EE +E L TS + RVRFKLPH VI Y PEE+YY ++ ++Y S EYSF S + EEP L+LAVD LPHV SSK+ Sbjct: 1 MGAKLCVTCYKTNEFCARDDSDFKNEGKQGRFCRILKRKEVERDEKKVRNVTLEDWIIASPGLKPEYTMSSGEMSFSSKNFQKKVHPCVSQRSGSLITETKDSLCLD--RPMKKHDEEGEEMLSSTSLNVKSERRVRFKLPHIVICYSQDDPCSPEETYYSSQIDK--------GSFYSSICREYSFDS----------SAEEPFLRLAVDILPHVSFSSKM 202 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 0
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.4g185520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g185520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g185520.1; organism=Vicia faba; type=mRNA; length=552bpback to top protein sequence of Vfaba.Tiffany.R1.4g185520.1_tif_v1 >Vfaba.Tiffany.R1.4g185520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g185520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g185520.1_tif_v1; organism=Vicia faba; type=polypeptide; length=183bpback to top mRNA from alignment at chr4:1577839334..1577839885- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.4g185520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g185520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g185520.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:1577839334..1577839885- (Vicia fababack to top |