Vfaba.Tiffany.R1.4g185520.1

Transcript Overview
NameVfaba.Tiffany.R1.4g185520.1
Unique NameVfaba.Tiffany.R1.4g185520.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length552
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:1577839334..1577839885 -Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
astifL070Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL225Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL054Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL619Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
tiftifL033Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifL397Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvtifL567Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvfhR274Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR512Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR312Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR554Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caitifL264Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL830Cicer arietinum ICC 4958 genome v2Cicer arietinum
tifvrvR451Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR513Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR444Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR464Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR483Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR509Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR510Vicia sativa cv. Studenica genome v1.0Vicia sativa

Orthologs
Gene/TranscriptAssemblySpecies
jg48588.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_03412Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_022784145.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Ca_21808.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
LR48_mrnaVigan01g324000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr03.1090Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun03g442000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.4g241920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g185520Vfaba.Tiffany.R1.4g185520_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g185520.1_tif_v1-exonVfaba.Tiffany.R1.4g185520.1_tif_v1-exon-chr4_tif_v1:1577839334..1577839885Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g185520.1_tif_v1-cdsVfaba.Tiffany.R1.4g185520.1_tif_v1-cds-chr4_tif_v1:1577839334..1577839885Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.4g185520.1_tif_v1Vfaba.Tiffany.R1.4g185520.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.4g185520.1_tif_v1Vfaba.Tiffany.R1.4g185520.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PAL2|A0A2K3PAL2_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g008950 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 1.655e-63
Identity = 122/203 (60.10%), Postives = 147/203 (72.41%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKENRT-----LKMKKVKR----ISRKLGFVDDWVLDSQ-EMKQSKKKVHPCSTRFRGELAKDSLCLSLV--EKTKNRLEEVDEGLTSYCS---------RKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSEEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKVS 182
            MGA LCTLSG+S KDCIKPK+NRT      K KK+++    I +K    +DW+L S  E++QSKK+VHPCSTRFRGEL KDSL L+L   E+ K+R  E+ EGLTS CS          + NRVRFKLPHTVI+Y+PEE Y   +D+EEE  E LL  YY SE+ SFSSP  REL+SFET+EEPIL+LAVD LPHVFVSSK+S
Sbjct:    1 MGANLCTLSGISLKDCIKPKQNRTRCAKIFKRKKIEKKILPIGKKFAPEEDWILSSSSEIRQSKKRVHPCSTRFRGELPKDSLNLTLCLKERMKSR-SEMGEGLTSDCSLVTRSFCEKSQKNRVRFKLPHTVIFYKPEEPY--REDDEEENEEALLMRYYSSEDDSFSSPKCRELFSFETSEEPILRLAVDVLPHVFVSSKIS 200          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MK28|A0A2Z6MK28_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_203360 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.518e-62
Identity = 125/203 (61.58%), Postives = 142/203 (69.95%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKENRTLKMKKVKR--ISRKLGFV--------DDWVLDSQ--EMKQSKKKVHPCSTRFRGELAKDSLCLSLVEKTKNRLEEVDEGLTSYCS---------RKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSEEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKVS 182
            MGA LCT+SG+S KDCIKPK+NRT   K  KR  I +K+  +        +DW+L S   EMKQSKK+VHPCSTRFR EL KDSLCL   E+ K+R  E DEGLTS CS          K N VRFKLPHTVI+Y+PEE Y EE++ EE     LL+ YY SEE SFSSP  RELYSFET EEPIL+LAVD LPHVFVSSKVS
Sbjct:    1 MGANLCTMSGISLKDCIKPKQNRTRCAKTFKRKKIEKKILPIGTKFSLEEEDWILSSSSSEMKQSKKRVHPCSTRFRAELPKDSLCLK--ERFKSRFGETDEGLTSDCSLVTRSFCEKSKKNSVRFKLPHTVIFYKPEEPYREEEENEE----ALLRRYYSSEEDSFSSPKCRELYSFETAEEPILRLAVDVLPHVFVSSKVS 197          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|G7JKI2|G7JKI2_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_4g133010 PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 5.576e-54
Identity = 119/209 (56.94%), Postives = 136/209 (65.07%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKENRTLKMKKVKR--------ISRKLGFVDDWVLDSQEMKQSKKKVHPCSTRFRG-----ELAKDSLCLSLVEKTKN---RLEEVDEGLTSYCSRKIN---------RVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYD--SEEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKVS 182
            MGAKLCTLSG   KDCIKPK+N T   K  KR        I + L   ++W+L   E+KQS+K+VHPCSTRF G     ELA+DSLCL  +EKTKN   + E  DEGLTS CS   N         RV FKLPHTVI+Y+PEE Y +E   EEE  E  LK YY+  SEEYSFSS     LYSFET EEP L+LAVD LP+VFVSSKVS
Sbjct:    1 MGAKLCTLSGSCVKDCIKPKQNITRLTKTFKRKPEKNATTIDKNLALEEEWILSFPELKQSRKRVHPCSTRFCGGSLISELAQDSLCL--LEKTKNCREKEELADEGLTSNCSLITNNLFGKSQKKRVNFKLPHTVIFYKPEEPYCKE---EEEEEEASLKDYYNINSEEYSFSS-----LYSFETAEEPSLRLAVDILPYVFVSSKVS 199          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371EZ34|A0A371EZ34_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_49346 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.307e-22
Identity = 75/201 (37.31%), Postives = 109/201 (54.23%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKENRTLKM-----KKVKRISRKLG--FVDDWVLDSQEMKQ-----SKKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGLTSYCSRKIN--RVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE-EYSFSSPNWRELYSFETT--EEPILKLAVDTLPHVFVSSKV 181
            MGA LC +  L+     K    +  K      +K++   +K+    ++D +L S  +K      S+KKVHPC T+FRG L   AKDSLCL       +  ++ +E L   C + ++  RV FKLPH +I+Y P+  +  E+ E++         YY SE E SF S   RE  SF+++  EEPI +LAVD LPHV VSS++
Sbjct:    1 MGANLCVMCHLTSDQNSKSPNLKKEKFCNILERKIETAEKKVAKATLEDCILASPRLKPDYHYVSRKKVHPCVTQFRGSLIAEAKDSLCLDRPINMTHHHKQAEEML---CDKSLSQKRVTFKLPHILIFYSPDHPFSPEEQEQD--------PYYSSESEASFYSSICRE-NSFDSSAAEEPIFRLAVDILPHVTVSSRI 189          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R9E7|A0A0S3R9E7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G543100 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.423e-20
Identity = 80/216 (37.04%), Postives = 107/216 (49.54%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLG--FVDDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYE------PEESYYEEDDEEEERREGLLKAYYDS--EEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181
            MGAKLC +   + K C +   +           R LK  +V+R  +K+    ++DW++ S  +K           +KKVHPC ++ RG L    KDSLCL   ++     EE  E L  TS   +   RVRFKLPHTVIYY       PEE+YY    +E         ++Y S   EYSF+S          + EEP L+LAVD LP V VSSK+
Sbjct:    1 MGAKLCIICYENSKACPRDGSDFKNERKQRGFCRILKRMEVERDEKKVRNLTLEDWIIASPGLKPGEGSFSSKNFQKKVHPCVSQRRGSLLTETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKSERRVRFKLPHTVIYYSLDEPCSPEETYYSSQIDE--------GSFYSSICREYSFNS----------SAEEPFLRLAVDILPLVSVSSKI 195          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TU26|A0A0L9TU26_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g324000 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.423e-20
Identity = 80/216 (37.04%), Postives = 107/216 (49.54%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLG--FVDDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYE------PEESYYEEDDEEEERREGLLKAYYDS--EEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181
            MGAKLC +   + K C +   +           R LK  +V+R  +K+    ++DW++ S  +K           +KKVHPC ++ RG L    KDSLCL   ++     EE  E L  TS   +   RVRFKLPHTVIYY       PEE+YY    +E         ++Y S   EYSF+S          + EEP L+LAVD LP V VSSK+
Sbjct:    1 MGAKLCIICYENSKACPRDGSDFKNERKQRGFCRILKRMEVERDEKKVRNLTLEDWIIASPGLKPGEGSFSSKNFQKKVHPCVSQRRGSLLTETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKSERRVRFKLPHTVIYYSLDEPCSPEETYYSSQIDE--------GSFYSSICREYSFNS----------SAEEPFLRLAVDILPLVSVSSKI 195          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FBX8|A0A3Q0FBX8_VIGRR (uncharacterized protein LOC111242087 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC111242087 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.237e-17
Identity = 75/210 (35.71%), Postives = 104/210 (49.52%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLGFV--DDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE--EYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181
            MGAKLC +   + K C +   +           R LK  +V+R  +K+ ++  +DW+  S  +K           +KKVHPC ++  G L    KDSLCL   ++     EE  E L  TS   +   RVRFKLPHT+IYY  +  +  E+             YY+S+  E SF S   +E  S  + EEP L+LAVD LP V VSSK+
Sbjct:   26 MGAKLCIMCYENRKSCPRDGSDFKNERKQRGYCRILKRMEVEREEKKVRYLTLEDWIKASPGLKPCEGSFSSKNFQKKVHPCVSQSSGSLITETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKPERRVRFKLPHTIIYYSLDGPFSPEE------------TYYNSQIDEGSFYSSICKEYSSNSSAEEPFLRLAVDILPLVSVSSKI 220          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|V7C781|V7C781_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G083400g PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.010e-17
Identity = 78/216 (36.11%), Postives = 106/216 (49.07%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLG--FVDDWVLDSQEMKQ---------------SKKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGLTSYCSRKIN---RVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE-EYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181
            MGAKLC L   + K C++   N           + LK ++V+R  +K+    ++DW++ S  +K                SKKKVHPC ++ RG L    KDSLCL       +R    DE + S+ S  +    RVRFKLPH VIYY P++    E+            AYY ++ E SF S    E     + EEP  +LAVD LPHV VSSK+
Sbjct:    1 MGAKLCLLCHENNKACVRDDSNFKNEKKQGGFCKMLKRREVEREEKKVPNLTLEDWLIASPGLKAECIMSSGEVSFSSKHSKKKVHPCVSQCRGSLIAETKDSLCL-------DRPTNHDEEMVSWTSLSVKSQRRVRFKLPHIVIYYSPDDPCSPEE------------AYYSTQSEGSFYSSICGEYSIDSSAEEPFFRLAVDILPHVSVSSKI 197          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F8G7|A0A3Q0F8G7_VIGRR (uncharacterized protein LOC111242087 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC111242087 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.130e-17
Identity = 74/200 (37.00%), Postives = 102/200 (51.00%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKEN-RTLKMKKVKRISRKLGFV--DDWVLDSQEMKQS---------KKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSE--EYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181
            +G K C   G  FK+  K +   R LK  +V+R  +K+ ++  +DW+  S  +K           +KKVHPC ++  G L    KDSLCL   ++     EE  E L  TS   +   RVRFKLPHT+IYY  +  +  E+             YY+S+  E SF S   +E  S  + EEP L+LAVD LP V VSSK+
Sbjct:   46 IGRKSCPRDGSDFKNERKQRGYCRILKRMEVEREEKKVRYLTLEDWIKASPGLKPCEGSFSSKNFQKKVHPCVSQSSGSLITETKDSLCL---DRPMKHDEEGGEMLSSTSLNVKPERRVRFKLPHTIIYYSLDGPFSPEE------------TYYNSQIDEGSFYSSICKEYSSNSSAEEPFLRLAVDILPLVSVSSKI 230          
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KZR5|A0A4D6KZR5_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g102 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.118e-16
Identity = 80/222 (36.04%), Postives = 104/222 (46.85%), Query Frame = 0
Query:    1 MGAKLCTLSGLSFKDCIKPKEN-----------RTLKMKKVKRISRKLGFV--DDWV-----------LDSQEM----KQSKKKVHPCSTRFRGEL---AKDSLCLSLVEKTKNRLEEVDEGL--TSYCSRKINRVRFKLPHTVIYYE------PEESYYEEDDEEEERREGLLKAYYDS--EEYSFSSPNWRELYSFETTEEPILKLAVDTLPHVFVSSKV 181
            MGAKLC     + + C +   +           R LK K+V+R  +K+  V  +DW+           + S EM    K  +KKVHPC ++  G L    KDSLCL      K   EE +E L  TS   +   RVRFKLPH VI Y       PEE+YY    ++         ++Y S   EYSF S          + EEP L+LAVD LPHV  SSK+
Sbjct:    1 MGAKLCVTCYKTNEFCARDDSDFKNEGKQGRFCRILKRKEVERDEKKVRNVTLEDWIIASPGLKPEYTMSSGEMSFSSKNFQKKVHPCVSQRSGSLITETKDSLCLD--RPMKKHDEEGEEMLSSTSLNVKSERRVRFKLPHIVICYSQDDPCSPEETYYSSQIDK--------GSFYSSICREYSFDS----------SAEEPFLRLAVDILPHVSFSSKM 202          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3PAL2|A0A2K3PAL2_TRIPR1.655e-6360.10Uncharacterized protein OS=Trifolium pratense OX=5... [more]
tr|A0A2Z6MK28|A0A2Z6MK28_TRISU2.518e-6261.58Uncharacterized protein OS=Trifolium subterraneum ... [more]
tr|G7JKI2|G7JKI2_MEDTR5.576e-5456.94Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A371EZ34|A0A371EZ34_MUCPR1.307e-2237.31Uncharacterized protein (Fragment) OS=Mucuna pruri... [more]
tr|A0A0S3R9E7|A0A0S3R9E7_PHAAN9.423e-2037.04Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9TU26|A0A0L9TU26_PHAAN9.423e-2037.04Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A3Q0FBX8|A0A3Q0FBX8_VIGRR1.237e-1735.71uncharacterized protein LOC111242087 isoform X2 OS... [more]
tr|V7C781|V7C781_PHAVU3.010e-1736.11Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A3Q0F8G7|A0A3Q0F8G7_VIGRR5.130e-1737.00uncharacterized protein LOC111242087 isoform X1 OS... [more]
tr|A0A4D6KZR5|A0A4D6KZR5_VIGUN7.118e-1636.04Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
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BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Tiffany.R1.4g185520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.4g185520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g185520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g185520.1; organism=Vicia faba; type=mRNA; length=552bp
ATGGGTGCTAAACTTTGTACATTATCAGGGTTATCTTTCAAGGATTGTAT
CAAACCTAAAGAAAACAGAACTTTGAAAATGAAGAAAGTGAAGAGGATTA
GTAGGAAATTAGGTTTTGTAGATGATTGGGTATTAGATTCTCAAGAAATG
AAACAGTCCAAGAAAAAAGTGCACCCTTGTTCAACTCGGTTTCGCGGTGA
GTTAGCTAAGGACAGTTTATGCTTAAGCTTAGTGGAAAAAACTAAGAACC
GTCTTGAAGAAGTTGATGAAGGGTTGACTTCATATTGTTCACGGAAGATT
AATAGAGTGAGGTTTAAACTTCCTCATACTGTTATATATTACGAACCAGA
AGAGTCTTATTATGAAGAAGATGATGAAGAAGAAGAAAGAAGAGAAGGGT
TGTTGAAGGCTTATTATGATAGTGAAGAATACTCCTTTTCATCACCTAAC
TGGAGAGAACTGTATTCATTTGAAACCACTGAGGAACCTATTTTGAAACT
AGCTGTGGATACTCTTCCTCATGTCTTTGTCTCTTCCAAAGTTTCAATTT
GA
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protein sequence of Vfaba.Tiffany.R1.4g185520.1_tif_v1

>Vfaba.Tiffany.R1.4g185520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g185520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g185520.1_tif_v1; organism=Vicia faba; type=polypeptide; length=183bp
MGAKLCTLSGLSFKDCIKPKENRTLKMKKVKRISRKLGFVDDWVLDSQEM
KQSKKKVHPCSTRFRGELAKDSLCLSLVEKTKNRLEEVDEGLTSYCSRKI
NRVRFKLPHTVIYYEPEESYYEEDDEEEERREGLLKAYYDSEEYSFSSPN
WRELYSFETTEEPILKLAVDTLPHVFVSSKVSI
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mRNA from alignment at chr4:1577839334..1577839885-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.4g185520.1_tif_v1 ID=Vfaba.Tiffany.R1.4g185520.1_tif_v1; Name=Vfaba.Tiffany.R1.4g185520.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:1577839334..1577839885- (Vicia faba
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