Vfaba.Tiffany.R1.5g082600.1

Transcript Overview


Name	Vfaba.Tiffany.R1.5g082600.1
Unique Name	Vfaba.Tiffany.R1.5g082600.1_tif_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	279

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr5	chromosome	chr5:733243374..733243731 -	Vicia faba cv. Tiffany genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba cv. Tiffany genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11	2023-05-10

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
tifzwsR442	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
astifL523	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
catifL221	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
crtifL295	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pvtifL054	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pstifL243	Pisum sativum Cameor genome v1a	Pisum sativum
tifvuR581	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvfhR361	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
antifL0109	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caitifL283	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL314	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
antifL0771	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL1001	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
tifvrvR543	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvuaR488	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR637	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cantifL182	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
jg33219.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
evm.model.Chr01.1032	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Phvul.001G120400.2	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
LR48_mrnaVigan03g213100	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Psat3g080320.1	Pisum sativum Cameor genome v1a	Pisum sativum
Vigun01g104300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Psat03G0270400-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
rna-TanjilR_32896	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-XM_014635724.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.5g082600	Vfaba.Tiffany.R1.5g082600_tif_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.5g082600.1_tif_v1-exon	Vfaba.Tiffany.R1.5g082600.1_tif_v1-exon-chr5_tif_v1:733243374..733243398	Vicia faba	exon
Vfaba.Tiffany.R1.5g082600.1_tif_v1-exon	Vfaba.Tiffany.R1.5g082600.1_tif_v1-exon-chr5_tif_v1:733243478..733243731	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.5g082600.1_tif_v1-cds	Vfaba.Tiffany.R1.5g082600.1_tif_v1-cds-chr5_tif_v1:733243374..733243398	Vicia faba	CDS
Vfaba.Tiffany.R1.5g082600.1_tif_v1-cds	Vfaba.Tiffany.R1.5g082600.1_tif_v1-cds-chr5_tif_v1:733243478..733243731	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.5g082600.1_tif_v1	Vfaba.Tiffany.R1.5g082600.1_tif_v1	Vicia faba	polypeptide
Vfaba.Tiffany.R1.5g082600.1_tif_v1	Vfaba.Tiffany.R1.5g082600.1_tif_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PI96|A0A0B2PI96_GLYSO (Transcription factor RADIALIS OS=Glycine soja OX=3848 GN=D0Y65_051317 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.210e-48
Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKN---SVSQQEKRMRNLSLH 92
            MAS S+SAS SWSVKDNKAFE+ALAVYDKD PDRWYNVAHAVGGKTPEEV++HYELLV+DVK IESG+VP+PNYKK    S  Q+EKR+RNL+L+
Sbjct:    1 MASCSISASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVQDVKHIESGRVPFPNYKKTTSESTDQEEKRLRNLNLN 95

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|Q0PJH6|Q0PJH6_SOYBN (MYB transcription factor MYB142 OS=Glycine max OX=3847 GN=MYB142 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.412e-47
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKN---SVSQQEKRMRNLS 90
            MAS S+SAS SWSVKDNKAFE+ALAVYDKD PDRWYNVAHAVGGKTPEEV++HYELLV+DVK IESG+VP+PNYKK    S  Q+EKR+RNL+
Sbjct:    1 MASCSISASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVQDVKHIESGRVPFPNYKKTTSESTDQEEKRLRNLN 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A2Q4K0|A2Q4K0_MEDTR (Homeodomain-related OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC157502g5v2 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.856e-45
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 0

Query:   14 VKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVSQQEKRMRNLSLH 92
            VK+NKAFERALAVYDKD PDRWYNVAHAVGGKTPEEV+KHYELLVED+K IESGKVP+PNYKK SVS +EKRMRN+SLH
Sbjct:   14 VKENKAFERALAVYDKDTPDRWYNVAHAVGGKTPEEVKKHYELLVEDIKHIESGKVPFPNYKKISVSHEEKRMRNMSLH 92

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371IA88|A0A371IA88_MUCPR (Transcription factor RADIALIS (Fragment) OS=Mucuna pruriens OX=157652 GN=RAD PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.818e-44
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVS-QQEKRMRNLSL 91
            MASSSMSA+ SWS KDNKAFERALAVYDKD PDRW NVA AV GKTPEEV++HYELL+ D+  IESG+VP+PNYKK +VS ++EKR+RNL L
Sbjct:    1 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWNNVASAVAGKTPEEVKRHYELLLRDISHIESGQVPFPNYKKTAVSDEEEKRLRNLKL 92

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LPR4|A0A445LPR4_GLYSO (Transcription factor RADIALIS OS=Glycine soja OX=3848 GN=D0Y65_004052 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.545e-43
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSV-SQQEKRMRNLSLH 92
            MASSSMSA+ SWS KDNKAFERALAVYDKD PDRW +VA AVGGKTP+EV+ HYELL+ D+ +IESGKVPYPNYKK++   ++EKRMRNL + 
Sbjct:    1 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWKDVARAVGGKTPDEVKSHYELLLRDISQIESGKVPYPNYKKSAEHDEEEKRMRNLKIQ 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|I1JFK3|I1JFK3_SOYBN (SANT domain-containing protein OS=Glycine max OX=3847 GN=100777923 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.545e-43
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSV-SQQEKRMRNLSLH 92
            MASSSMSA+ SWS KDNKAFERALAVYDKD PDRW +VA AVGGKTP+EV+ HYELL+ D+ +IESGKVPYPNYKK++   ++EKRMRNL + 
Sbjct:    1 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWKDVARAVGGKTPDEVKSHYELLLRDISQIESGKVPYPNYKKSAEHDEEEKRMRNLKIQ 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V4H2|A0A1S3V4H2_VIGRR (protein RADIALIS-like 3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771766 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.505e-42
Identity = 66/93 (70.97%), Postives = 80/93 (86.02%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVSQQE-KRMRNLSLH 92
            MASSSMSA+ SWS KDNKAFERALAVYDKD PDRW NVA AVGGKTP+EV++HYELL+ D+ +IESG+VP+PNYKK + S +E KR++N+ L 
Sbjct:    1 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWNNVALAVGGKTPDEVKRHYELLLRDITQIESGQVPFPNYKKTAESDEEGKRLKNMELQ 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3STR4|A0A0S3STR4_PHAAN (SANT domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G315800 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.174e-42
Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVSQQE-KRMRNLSLH 92
            MASSSMSA+ SWS KDNKAFERALAVYDKD PDRW NVA AVGGKTP+EV++HYELL+ D+  IESG+VP+PNYKK + S +E KR++N+ L 
Sbjct:    1 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWNNVALAVGGKTPDEVKRHYELLLRDITEIESGQVPFPNYKKTAESDEEGKRLKNMKLQ 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TV83|A0A0L9TV83_PHAAN (SANT domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g047700 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.174e-42
Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVSQQE-KRMRNLSLH 92
            MASSSMSA+ SWS KDNKAFERALAVYDKD PDRW NVA AVGGKTP+EV++HYELL+ D+  IESG+VP+PNYKK + S +E KR++N+ L 
Sbjct:    1 MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWNNVALAVGGKTPDEVKRHYELLLRDITEIESGQVPFPNYKKTAESDEEGKRLKNMKLQ 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Match: tr|A0A394DAK5|A0A394DAK5_LUPAN (SANT domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11841 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.085e-42
Identity = 67/93 (72.04%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVSQQE-KRMRNLSLH 92
            MASSSMS S +WS KDNKAFERALAV+DKD PDRWYNVA+AVGGKT EEV++HY+LLV+D+K IESGKVP+P YKK+  S+ + KRM NL L 
Sbjct:    1 MASSSMSQSGTWSAKDNKAFERALAVFDKDTPDRWYNVANAVGGKTAEEVKRHYDLLVQDIKYIESGKVPFPKYKKSGGSEDDIKRMNNLKLQ 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q58FS3|RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.017e-38
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 0

Query:    3 SSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKK--NSVSQQEKRMRNLSLH 92
            +S+  +   WS K+NKAFERALAVYDKD PDRW NVA AV G+TPEEV+KHYE+LVED+K IESGKVP+PNY+    ++   EKR RNL + 
Sbjct:    2 ASTRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPFPNYRTTGGNMKTDEKRFRNLKIR 93

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4JVB8|RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.088e-34
Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 0

Query:   12 WSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNS------VSQQEKRMRNLSLH 92
            W+ K NKAFE+ALA YD+D P+RW NVA  VGGKT EEV++HYELLV+D+  IE+G VP+PNY+ +       +SQ+EKRMRN+ L 
Sbjct:   14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPFPNYRTSGGCTNGRLSQEEKRMRNMRLQ 100

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1A173|RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 7.308e-34
Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKK---NSVSQQE---KRMRNLSL 91
            MAS+S S+ S W+   NK FERALAVYDKD PDRW+NVA AVGGKT EEV++HY++LVED+  IE+G+VP PNYK    NS S  +   ++M+NL +
Sbjct:    1 MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPLPNYKTFESNSRSINDFDTRKMKNLKI 97

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SIJ5|RADL2_ARATH (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.808e-33
Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 0

Query:   12 WSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNS-------VSQQEKRMRNLSLH 92
            W+VK NKAFERALAVYD+D PDRW+NVA AVGGKTPEE ++ Y+LLV D++ IE+G VP+P+YK  +       +  +EKRMR++ L 
Sbjct:   14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPFPDYKTTTGNSNRGRLRDEEKRMRSMKLQ 101

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6NNN0|RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.426e-30
Identity = 45/67 (67.16%), Postives = 55/67 (82.09%), Query Frame = 0

Query:   12 WSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNS 78
            W+ K+NK FERALA YD+D PDRW+NVA AVGGK+ EEVR+HYELL+ DV  IESG+ P+PNY+ N 
Sbjct:   12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPHPNYRSNG 78

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GW75|RADL5_ARATH (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.257e-25
Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVSQQEKRMRNLSL 91
            MASSSMS+SSSW+ K NK FERALAVYDKD PDRW NVA AVG K+ EEV++HY++LVED+  IE   VP P YK   V  + + + +  L
Sbjct:    1 MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKYKTVDVGSKSRGIDDFDL 91

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1G3C4|RADL4_ARATH (Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX=3702 GN=RL4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.253e-21
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 0

Query:   15 KDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYK 75
            +++K FE ALA +DKD PDRW  +A AVGGK+ EEV++HYELL+ DV  IESG+ P P Y+
Sbjct:   14 REDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRYR 74

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FNN6|SRM1_ARATH (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.605e-17
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNY 74
            M    +S  S WS +D+ AFERALA    ++ +RW  +A  V GK+ E++++HYELLVEDV RIESG VP P Y
Sbjct:    1 MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPLPAY 74

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8S9H7|DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.811e-15
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 0

Query:    8 ASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNS 78
            +++ W+  +NKAFE ALAV+D++ P+RW  VA  V GKT  +V + Y+ L +DV  IE+G VP P Y  +S
Sbjct:   22 STTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFVPVPGYSTSS 92

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT4G39250.1 (| RAD-like 1 | Chr4:18271457-18271857 REVERSE LENGTH=100 | 201606)

HSP 1 Score: 115.546 bits (288), Expect = 4.182e-35
Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 0

Query:   12 WSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNS------VSQQEKRMRNLSLH 92
            W+ K NKAFE+ALA YD+D P+RW NVA  VGGKT EEV++HYELLV+D+  IE+G VP+PNY+ +       +SQ+EKRMRN+ L 
Sbjct:   14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPFPNYRTSGGCTNGRLSQEEKRMRNMRLQ 100

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT1G75250.2 (| RAD-like 6 | Chr1:28244463-28245453 REVERSE LENGTH=97 | 201606)

HSP 1 Score: 115.161 bits (287), Expect = 7.476e-35
Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKK---NSVSQQE---KRMRNLSL 91
            MAS+S S+ S W+   NK FERALAVYDKD PDRW+NVA AVGGKT EEV++HY++LVED+  IE+G+VP PNYK    NS S  +   ++M+NL +
Sbjct:    1 MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPLPNYKTFESNSRSINDFDTRKMKNLKI 97

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT2G21650.1 (| Homeodomain-like superfamily protein | Chr2:9259654-9260419 FORWARD LENGTH=101 | 201606)

HSP 1 Score: 114.005 bits (284), Expect = 1.849e-34
Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 0

Query:   12 WSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNS-------VSQQEKRMRNLSLH 92
            W+VK NKAFERALAVYD+D PDRW+NVA AVGGKTPEE ++ Y+LLV D++ IE+G VP+P+YK  +       +  +EKRMR++ L 
Sbjct:   14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPFPDYKTTTGNSNRGRLRDEEKRMRSMKLQ 101

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT1G75250.1 (| RAD-like 6 | Chr1:28245073-28245453 REVERSE LENGTH=126 | 201606)

HSP 1 Score: 114.005 bits (284), Expect = 4.519e-34
Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYK 75
            MAS+S S+ S W+   NK FERALAVYDKD PDRW+NVA AVGGKT EEV++HY++LVED+  IE+G+VP PNYK
Sbjct:    1 MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPLPNYK 75

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT1G19510.1 (| RAD-like 5 | Chr1:6756483-6757290 REVERSE LENGTH=100 | 201606)

HSP 1 Score: 93.2041 bits (230), Expect = 3.332e-26
Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYKKNSVSQQEKRMRNLSL 91
            MASSSMS+SSSW+ K NK FERALAVYDKD PDRW NVA AVG K+ EEV++HY++LVED+  IE   VP P YK   V  + + + +  L
Sbjct:    1 MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKYKTVDVGSKSRGIDDFDL 91

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT2G18328.1 (| RAD-like 4 | Chr2:7964478-7964711 FORWARD LENGTH=77 | 201606)

HSP 1 Score: 83.5741 bits (205), Expect = 1.282e-22
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 0

Query:   15 KDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYK 75
            +++K FE ALA +DKD PDRW  +A AVGGK+ EEV++HYELL+ DV  IESG+ P P Y+
Sbjct:   14 REDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRYR 74

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT4G36570.1 (| RAD-like 3 | Chr4:17254660-17254836 FORWARD LENGTH=58 | 201606)

HSP 1 Score: 74.3294 bits (181), Expect = 3.560e-19
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0

Query:   12 WSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYE 55
            W+ K+NK FERALA YD+D PDRW+NVA AVGGK+ EEVR+HYE
Sbjct:   12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYE 55

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT5G05790.2 (| Duplicated homeodomain-like superfamily protein | Chr5:1740724-1741671 REVERSE LENGTH=277 | 201606)

HSP 1 Score: 77.7962 bits (190), Expect = 1.456e-18
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0

Query:    9 SSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYK 75
            SSSW+ ++NK FERALAVY  D PDRW+ VA  + GKT  +V + Y  L ED+  IE+G VP P Y+
Sbjct:   28 SSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYR 94

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT5G05790.1 (| Duplicated homeodomain-like superfamily protein | Chr5:1740724-1741671 REVERSE LENGTH=277 | 201606)

HSP 1 Score: 77.7962 bits (190), Expect = 1.456e-18
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0

Query:    9 SSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNYK 75
            SSSW+ ++NK FERALAVY  D PDRW+ VA  + GKT  +V + Y  L ED+  IE+G VP P Y+
Sbjct:   28 SSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYR 94

[Close]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Match: AT3G11280.2 (| Duplicated homeodomain-like superfamily protein | Chr3:3533477-3534393 REVERSE LENGTH=263 | 201606)

HSP 1 Score: 76.6406 bits (187), Expect = 3.154e-18
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0

Query:    1 MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEVRKHYELLVEDVKRIESGKVPYPNY 74
            M S   S+S SW+ ++NK FERALA+Y +D+PDRW+ VA  + GKT  +V K Y  L EDV  IE+G+VP P Y
Sbjct:   22 MVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGY 95

The following BLAST results are available for this feature:

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A0B2PI96\|A0A0B2PI96_GLYSO	2.210e-48	77.89	Transcription factor RADIALIS OS=Glycine soja OX=3...	[more]
tr\|Q0PJH6\|Q0PJH6_SOYBN	1.412e-47	78.49	MYB transcription factor MYB142 OS=Glycine max OX=...	[more]
tr\|A2Q4K0\|A2Q4K0_MEDTR	3.856e-45	87.34	Homeodomain-related OS=Medicago truncatula OX=3880...	[more]
tr\|A0A371IA88\|A0A371IA88_MUCPR	6.818e-44	75.00	Transcription factor RADIALIS (Fragment) OS=Mucuna...	[more]
tr\|A0A445LPR4\|A0A445LPR4_GLYSO	5.545e-43	73.12	Transcription factor RADIALIS OS=Glycine soja OX=3...	[more]
tr\|I1JFK3\|I1JFK3_SOYBN	5.545e-43	73.12	SANT domain-containing protein OS=Glycine max OX=3...	[more]
tr\|A0A1S3V4H2\|A0A1S3V4H2_VIGRR	1.505e-42	70.97	protein RADIALIS-like 3 OS=Vigna radiata var. radi...	[more]
tr\|A0A0S3STR4\|A0A0S3STR4_PHAAN	3.174e-42	70.97	SANT domain-containing protein OS=Vigna angularis ...	[more]
tr\|A0A0L9TV83\|A0A0L9TV83_PHAAN	3.174e-42	70.97	SANT domain-containing protein OS=Phaseolus angula...	[more]
tr\|A0A394DAK5\|A0A394DAK5_LUPAN	4.085e-42	72.04	SANT domain-containing protein OS=Lupinus angustif...	[more]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
sp\|Q58FS3\|RAD_ANTMA	8.017e-38	63.04	Transcription factor RADIALIS OS=Antirrhinum majus...	[more]
sp\|F4JVB8\|RADL1_ARATH	4.088e-34	58.62	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX...	[more]
sp\|Q1A173\|RADL6_ARATH	7.308e-34	58.76	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SIJ5\|RADL2_ARATH	1.808e-33	57.95	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX...	[more]
sp\|Q6NNN0\|RADL3_ARATH	5.426e-30	67.16	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX...	[more]
sp\|Q8GW75\|RADL5_ARATH	3.257e-25	59.34	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX...	[more]
sp\|Q1G3C4\|RADL4_ARATH	1.253e-21	59.02	Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9FNN6\|SRM1_ARATH	7.605e-17	51.35	Transcription factor SRM1 OS=Arabidopsis thaliana ...	[more]
sp\|Q8S9H7\|DIV_ANTMA	1.811e-15	46.48	Transcription factor DIVARICATA OS=Antirrhinum maj...	[more]

BLAST of Vfaba.Tiffany.R1.5g082600.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G39250.1	4.182e-35	58.62	\| RAD-like 1 \| Chr4:18271457-18271857 REVERSE LENG...	[more]
AT1G75250.2	7.476e-35	58.76	\| RAD-like 6 \| Chr1:28244463-28245453 REVERSE LENG...	[more]
AT2G21650.1	1.849e-34	57.95	\| Homeodomain-like superfamily protein \| Chr2:9259...	[more]
AT1G75250.1	4.519e-34	68.00	\| RAD-like 6 \| Chr1:28245073-28245453 REVERSE LENG...	[more]
AT1G19510.1	3.332e-26	59.34	\| RAD-like 5 \| Chr1:6756483-6757290 REVERSE LENGTH...	[more]
AT2G18328.1	1.282e-22	59.02	\| RAD-like 4 \| Chr2:7964478-7964711 FORWARD LENGTH...	[more]
AT4G36570.1	3.560e-19	72.73	\| RAD-like 3 \| Chr4:17254660-17254836 FORWARD LENG...	[more]
AT5G05790.2	1.456e-18	53.73	\| Duplicated homeodomain-like superfamily protein ...	[more]
AT5G05790.1	1.456e-18	53.73	\| Duplicated homeodomain-like superfamily protein ...	[more]
AT3G11280.2	3.154e-18	52.70	\| Duplicated homeodomain-like superfamily protein ...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 2..71 e-value: 5.4E-24 score: 85.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..92
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..86
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 7..62 score: 10.243092
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..58 score: 5.993406
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 18..58 e-value: 4.66499E-4 score: 33.3178
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..65

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:733243374..733243731-

mRNA sequence

>Vfaba.Tiffany.R1.5g082600.1_tif_v1 ID=Vfaba.Tiffany.R1.5g082600.1_tif_v1; Name=Vfaba.Tiffany.R1.5g082600.1; organism=Vicia faba; type=mRNA; length=279bp
ATGGCATCTAGCTCAATGTCAGCATCTAGCTCATGGAGTGTTAAGGACAA
TAAAGCCTTTGAAAGAGCTCTAGCTGTTTATGATAAAGATGCGCCAGATC
GTTGGTACAATGTAGCTCATGCTGTTGGTGGCAAAACTCCGGAGGAAGTA
AGGAAACATTATGAACTCCTTGTTGAAGATGTTAAGCGGATTGAGTCGGG
CAAAGTTCCGTACCCAAATTACAAGAAAAATTCAGTCTCTCAACAAGAGA
AAAGGATGAGGAACCTGAGCCTTCATTGA

protein sequence of Vfaba.Tiffany.R1.5g082600.1_tif_v1

>Vfaba.Tiffany.R1.5g082600.1_tif_v1 ID=Vfaba.Tiffany.R1.5g082600.1_tif_v1; Name=Vfaba.Tiffany.R1.5g082600.1_tif_v1; organism=Vicia faba; type=polypeptide; length=92bp
MASSSMSASSSWSVKDNKAFERALAVYDKDAPDRWYNVAHAVGGKTPEEV
RKHYELLVEDVKRIESGKVPYPNYKKNSVSQQEKRMRNLSLH

mRNA from alignment at chr5:733243374..733243731-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Tiffany.R1.5g082600.1_tif_v1 ID=Vfaba.Tiffany.R1.5g082600.1_tif_v1; Name=Vfaba.Tiffany.R1.5g082600.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:733243374..733243731- (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR044636	RADIALIS-like
IPR017884	SANT_dom
IPR001005	SANT/Myb
IPR009057	Homeodomain-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	DNA-binding transcription factor activity

Search form

Vfaba.Tiffany.R1.5g082600.1