Vfaba.Tiffany.R1.5g091640.1

Transcript Overview
NameVfaba.Tiffany.R1.5g091640.1
Unique NameVfaba.Tiffany.R1.5g091640.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length972
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:812954140..812957237 +Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR442Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL439Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL504Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL221Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL348Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crtifL274Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cctifL0770Cajanus cajan Asha genome v1.0Cajanus cajan
pvtifL054Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tiftifL203Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifL243Pisum sativum Cameor genome v1aPisum sativum
pvtifL652Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuR581Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR342Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhR361Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR648Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caitifL281Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0447Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL0850Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR561Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR607Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR545Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR641Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR659Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL182Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL289Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Psat03G0235500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cr_05938.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_07373.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr01.1205Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg32819.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004493520.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_009823Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun01g123700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_022778945.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.001G141800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.5g113040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g091640Vfaba.Tiffany.R1.5g091640_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g091640.1_tif_v1-exonVfaba.Tiffany.R1.5g091640.1_tif_v1-exon-chr5_tif_v1:812954140..812954317Vicia fabaexon
Vfaba.Tiffany.R1.5g091640.1_tif_v1-exonVfaba.Tiffany.R1.5g091640.1_tif_v1-exon-chr5_tif_v1:812954526..812954606Vicia fabaexon
Vfaba.Tiffany.R1.5g091640.1_tif_v1-exonVfaba.Tiffany.R1.5g091640.1_tif_v1-exon-chr5_tif_v1:812955511..812955760Vicia fabaexon
Vfaba.Tiffany.R1.5g091640.1_tif_v1-exonVfaba.Tiffany.R1.5g091640.1_tif_v1-exon-chr5_tif_v1:812955859..812955946Vicia fabaexon
Vfaba.Tiffany.R1.5g091640.1_tif_v1-exonVfaba.Tiffany.R1.5g091640.1_tif_v1-exon-chr5_tif_v1:812956271..812956487Vicia fabaexon
Vfaba.Tiffany.R1.5g091640.1_tif_v1-exonVfaba.Tiffany.R1.5g091640.1_tif_v1-exon-chr5_tif_v1:812956592..812956683Vicia fabaexon
Vfaba.Tiffany.R1.5g091640.1_tif_v1-exonVfaba.Tiffany.R1.5g091640.1_tif_v1-exon-chr5_tif_v1:812957172..812957237Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g091640.1_tif_v1-cdsVfaba.Tiffany.R1.5g091640.1_tif_v1-cds-chr5_tif_v1:812954140..812954317Vicia fabaCDS
Vfaba.Tiffany.R1.5g091640.1_tif_v1-cdsVfaba.Tiffany.R1.5g091640.1_tif_v1-cds-chr5_tif_v1:812954526..812954606Vicia fabaCDS
Vfaba.Tiffany.R1.5g091640.1_tif_v1-cdsVfaba.Tiffany.R1.5g091640.1_tif_v1-cds-chr5_tif_v1:812955511..812955760Vicia fabaCDS
Vfaba.Tiffany.R1.5g091640.1_tif_v1-cdsVfaba.Tiffany.R1.5g091640.1_tif_v1-cds-chr5_tif_v1:812955859..812955946Vicia fabaCDS
Vfaba.Tiffany.R1.5g091640.1_tif_v1-cdsVfaba.Tiffany.R1.5g091640.1_tif_v1-cds-chr5_tif_v1:812956271..812956487Vicia fabaCDS
Vfaba.Tiffany.R1.5g091640.1_tif_v1-cdsVfaba.Tiffany.R1.5g091640.1_tif_v1-cds-chr5_tif_v1:812956592..812956683Vicia fabaCDS
Vfaba.Tiffany.R1.5g091640.1_tif_v1-cdsVfaba.Tiffany.R1.5g091640.1_tif_v1-cds-chr5_tif_v1:812957172..812957237Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.5g091640.1_tif_v1Vfaba.Tiffany.R1.5g091640.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.5g091640.1_tif_v1Vfaba.Tiffany.R1.5g091640.1_tif_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|G7KVC7|G7KVC7_MEDTR (Non-structural maintenance of chromosomes element 4 OS=Medicago truncatula OX=3880 GN=11443476 PE=3 SV=2)

HSP 1 Score: 476.863 bits (1226), Expect = 6.932e-167
Identity = 237/327 (72.48%), Postives = 276/327 (84.40%), Query Frame = 0
Query:    1 MPRSHIDHIIKVKRE--KNIS-RRDHNSNGVENNDDDFAHQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSVVGEELMPHRNIQSQ 322
            M +SH D+II VKRE   N+S   D +++ V +N D+  +QTSN RR LRSRYLAV+N+I GDE ENIAKTDS+ FGSIF++IE LH+SVTT R+QVADAQALLD+TKSL +S K HSSGGLTPS FVTHI+EKFG+ GGTS SREDC  NSIAW+DIG+AVSS+FG GYGCSTM GPMESKIK KR+ R++ +KPT+LARP E+ E S+  R DTDK MLTMFNIL+KN+SV LENLVLN+ SFAQTVENLFALSFLVKDGRA+IKVDK+ RHLVSPRNAP AKSV+S DVAL+HFVFR DY DWK+MVR+VVGEELMP RN QSQ
Sbjct:    1 MSQSHNDNIISVKRELIMNMSCEDDDDNSDVVDNGDEVDYQTSNGRRVLRSRYLAVQNLIRGDEKENIAKTDSKTFGSIFSKIEKLHKSVTTPREQVADAQALLDITKSLALSVKAHSSGGLTPSTFVTHILEKFGQGGGTSTSREDCSRNSIAWQDIGIAVSSIFGAGYGCSTMIGPMESKIKPKRVYRRRSVKPTQLARPAEVVESSKNGRNDTDKNMLTMFNILKKNRSVNLENLVLNRTSFAQTVENLFALSFLVKDGRAQIKVDKSRRHLVSPRNAPAAKSVISMDVALTHFVFRFDYNDWKLMVRTVVGEELMPQRNSQSQ 327          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XRV9|A0A1S2XRV9_CICAR (Non-structural maintenance of chromosomes element 4 OS=Cicer arietinum OX=3827 GN=LOC101504888 PE=3 SV=1)

HSP 1 Score: 468.003 bits (1203), Expect = 1.418e-163
Identity = 238/315 (75.56%), Postives = 267/315 (84.76%), Query Frame = 0
Query:   12 VKREKNISRRDHNSNGVENNDDDFAHQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKR-INRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRNIQSQ 322
            VKR+ + S  + +SNG   ND D+  QT N RR LRSRYLAVKN+I+GDEME+ A+ + E+FG+IF E+E+LH+ VT  R+QVADAQALLD+TKSLV+SAK H SGGLTPSAFVTHI++KFG  GGT  S EDC  NSI+WKDIGVAVSS FGGGYG STM GPM++KIKQ+R INRKK +KP ELARPEEL EGSREER DTDK MLTMFNILRKN+  +LENLVLNKNSFAQT ENLFALSFLVKDGRAEIKVDKAGR LVSPRNAPTAKSV+SKDV LSHFVFR DY DWK+M RSV VGEELMPHRNIQSQ
Sbjct:    2 VKRQLDFSIDNDSSNG---NDTDY--QTINGRRVLRSRYLAVKNVINGDEMEHNAELNCEMFGTIFGEMESLHKLVTKPREQVADAQALLDMTKSLVISAKVHFSGGLTPSAFVTHILQKFGACGGTITSTEDCSRNSISWKDIGVAVSSTFGGGYGFSTMIGPMDAKIKQRRVINRKKHVKPAELARPEELVEGSREERNDTDKNMLTMFNILRKNRIFRLENLVLNKNSFAQTAENLFALSFLVKDGRAEIKVDKAGRQLVSPRNAPTAKSVISKDVVLSHFVFRFDYNDWKLMARSVGVGEELMPHRNIQSQ 311          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7YD65|A0A3Q7YD65_CICAR (Non-structural maintenance of chromosomes element 4 OS=Cicer arietinum OX=3827 GN=LOC101504888 PE=3 SV=1)

HSP 1 Score: 461.07 bits (1185), Expect = 6.229e-161
Identity = 237/315 (75.24%), Postives = 266/315 (84.44%), Query Frame = 0
Query:   12 VKREKNISRRDHNSNGVENNDDDFAHQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKR-INRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRNIQSQ 322
            VKR+ + S  + +SNG   ND D+  QT N RR LRSRYLAVKN+I+ DEME+ A+ + E+FG+IF E+E+LH+ VT  R+QVADAQALLD+TKSLV+SAK H SGGLTPSAFVTHI++KFG  GGT  S EDC  NSI+WKDIGVAVSS FGGGYG STM GPM++KIKQ+R INRKK +KP ELARPEEL EGSREER DTDK MLTMFNILRKN+  +LENLVLNKNSFAQT ENLFALSFLVKDGRAEIKVDKAGR LVSPRNAPTAKSV+SKDV LSHFVFR DY DWK+M RSV VGEELMPHRNIQSQ
Sbjct:    2 VKRQLDFSIDNDSSNG---NDTDY--QTINGRRVLRSRYLAVKNVIN-DEMEHNAELNCEMFGTIFGEMESLHKLVTKPREQVADAQALLDMTKSLVISAKVHFSGGLTPSAFVTHILQKFGACGGTITSTEDCSRNSISWKDIGVAVSSTFGGGYGFSTMIGPMDAKIKQRRVINRKKHVKPAELARPEELVEGSREERNDTDKNMLTMFNILRKNRIFRLENLVLNKNSFAQTAENLFALSFLVKDGRAEIKVDKAGRQLVSPRNAPTAKSVISKDVVLSHFVFRFDYNDWKLMARSVGVGEELMPHRNIQSQ 310          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NW38|A0A2K3NW38_TRIPR (Non-structural maintenance of chromosomes element 4 OS=Trifolium pratense OX=57577 GN=L195_g003748 PE=3 SV=1)

HSP 1 Score: 455.677 bits (1171), Expect = 5.507e-158
Identity = 230/294 (78.23%), Postives = 253/294 (86.05%), Query Frame = 0
Query:   12 VKREKNISRRDHNSNGVENNDDDFAHQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKV 303
            VKRE NI    HN    +N+DDD  +++ + RR LRSRYLAVKN+I+GDE ENIAKTDSEVFGSI  EIENLHQSVTTTR+QVADAQALLD+TKSL VS K HSSGGLTPSAFVTHI+EKFG+RGG   SREDC  NSIAW DIGVAVSSVFG GYGCST+ GPM++K+KQ+R+ RK+ LKPTELARPE+L EGS+ ER DTDK MLTMFNILRKN+ VKLENLVLN+NSFAQTVENLF LSFLVKDGRAEIKVDKAG HLVSPRNAP AKSV SKDVALSHFVFRLDY DWK 
Sbjct:    2 VKRELNIP--IHNDAFDDNSDDDVDYESVHGRRNLRSRYLAVKNLINGDERENIAKTDSEVFGSIIGEIENLHQSVTTTREQVADAQALLDITKSLGVSVKAHSSGGLTPSAFVTHILEKFGQRGGKRTSREDCSRNSIAWNDIGVAVSSVFGRGYGCSTVIGPMDAKLKQRRVYRKRSLKPTELARPEQLVEGSKNERNDTDKNMLTMFNILRKNRLVKLENLVLNRNSFAQTVENLFTLSFLVKDGRAEIKVDKAGCHLVSPRNAPAAKSVTSKDVALSHFVFRLDYNDWKC 293          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6N2U3|A0A2Z6N2U3_TRISU (Non-structural maintenance of chromosomes element 4 OS=Trifolium subterraneum OX=3900 GN=TSUD_331150 PE=3 SV=1)

HSP 1 Score: 431.795 bits (1109), Expect = 1.052e-149
Identity = 225/298 (75.50%), Postives = 253/298 (84.90%), Query Frame = 0
Query:   12 VKREKNISRRDHNSNGVENNDDDFAHQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDCNS-IAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV 308
            VKRE NI       N   +N DD  +QT + RR LRSRYLAVKN+I+GDE ENIAKTDSEVFGSI +EIENLHQSVTTTR+QVADAQALLD+TKSL VS K HSSGGLTPSAFVTHI+EKFG+RGGTS SR++  + IAW DIGVAVSS FGG YGCST+ GPM++K+KQ+R+ RK+ +KPTELARPE+L EGSR ER DTDK MLTMFNILRKNK VKLENLVL++NSFAQTVENLF LSFLVKDGRAEIKVDKAG HLVSPRNAP AKSV SK VA+SHFVFRLDY DWKV  +++
Sbjct:    2 VKRELNIPIH----NDASDNSDDVDYQTVHGRRNLRSRYLAVKNLINGDERENIAKTDSEVFGSIISEIENLHQSVTTTREQVADAQALLDITKSLGVSVKAHSSGGLTPSAFVTHILEKFGQRGGTSSSRKNSRNSIAWNDIGVAVSSAFGGAYGCSTVIGPMDAKLKQRRVRRKRSVKPTELARPEQLVEGSRNERNDTDKNMLTMFNILRKNKLVKLENLVLSRNSFAQTVENLFTLSFLVKDGRAEIKVDKAGCHLVSPRNAPAAKSVTSKQVAMSHFVFRLDYNDWKVSAQNL 295          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396H585|A0A396H585_MEDTR (Non-structural maintenance of chromosomes element 4 OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0258591 PE=3 SV=1)

HSP 1 Score: 426.787 bits (1096), Expect = 8.538e-148
Identity = 202/262 (77.10%), Postives = 230/262 (87.79%), Query Frame = 0
Query:   63 ENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSVVGEELMPHRNIQSQ 322
            ENIAKTDS+ FGSIF++IE LH+SVTT R+QVADAQALLD+TKSL +S K HSSGGLTPS FVTHI+EKFG+ GGTS SREDC  NSIAW+DIG+AVSS+FG GYGCSTM GPMESKIK KR+ R++ +KPT+LARP E+ E S+  R DTDK MLTMFNIL+KN+SV LENLVLN+ SFAQTVENLFALSFLVKDGRA+IKVDK+ RHLVSPRNAP AKSV+S DVAL+HFVFR DY DWK+MVR+VVGEELMP RN QSQ
Sbjct:   25 ENIAKTDSKTFGSIFSKIEKLHKSVTTPREQVADAQALLDITKSLALSVKAHSSGGLTPSTFVTHILEKFGQGGGTSTSREDCSRNSIAWQDIGIAVSSIFGAGYGCSTMIGPMESKIKPKRVYRRRSVKPTQLARPAEVVESSKNGRNDTDKNMLTMFNILKKNRSVNLENLVLNRTSFAQTVENLFALSFLVKDGRAQIKVDKSRRHLVSPRNAPAAKSVISMDVALTHFVFRFDYNDWKLMVRTVVGEELMPQRNSQSQ 286          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XTX2|A0A1S2XTX2_CICAR (Non-structural maintenance of chromosomes element 4 OS=Cicer arietinum OX=3827 GN=LOC101504888 PE=3 SV=1)

HSP 1 Score: 421.779 bits (1083), Expect = 3.855e-146
Identity = 209/265 (78.87%), Postives = 231/265 (87.17%), Query Frame = 0
Query:   62 MENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKR-INRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRNIQSQ 322
            ME+ A+ + E+FG+IF E+E+LH+ VT  R+QVADAQALLD+TKSLV+SAK H SGGLTPSAFVTHI++KFG  GGT  S EDC  NSI+WKDIGVAVSS FGGGYG STM GPM++KIKQ+R INRKK +KP ELARPEEL EGSREER DTDK MLTMFNILRKN+  +LENLVLNKNSFAQT ENLFALSFLVKDGRAEIKVDKAGR LVSPRNAPTAKSV+SKDV LSHFVFR DY DWK+M RSV VGEELMPHRNIQSQ
Sbjct:    1 MEHNAELNCEMFGTIFGEMESLHKLVTKPREQVADAQALLDMTKSLVISAKVHFSGGLTPSAFVTHILQKFGACGGTITSTEDCSRNSISWKDIGVAVSSTFGGGYGFSTMIGPMDAKIKQRRVINRKKHVKPAELARPEELVEGSREERNDTDKNMLTMFNILRKNRIFRLENLVLNKNSFAQTAENLFALSFLVKDGRAEIKVDKAGRQLVSPRNAPTAKSVISKDVVLSHFVFRFDYNDWKLMARSVGVGEELMPHRNIQSQ 265          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6M7Z1|A0A4D6M7Z1_VIGUN (Non-structural maintenance of chromosomes element 4 OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2219 PE=3 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 3.857e-136
Identity = 201/294 (68.37%), Postives = 237/294 (80.61%), Query Frame = 0
Query:   33 DDFAHQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKR-INRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRNIQSQ 322
            DD  +QT   RR +RSRYLA KNMIH DE E IA+ DS+ F  IF+E+E+LHQ VT  R+QVADA+ALL++T+SLV+S +  ++GG+TPS FVTHI++KFG   G S S EDC  NS+AW DIGVAVS VF  GYGC TM  PM++KIKQ++ INR+K ++PTELARPEEL  GS EE  +TDK MLTMFNILR NK VKLENLVLN+NSF QTVENLFALSFLV+DGRAEIKV++AG  LVSPRNAP A SVVS DVA SHFVFR D+ DWK+MVR+V VGEELMPHRN +SQ
Sbjct:   29 DDADYQTPKRRRGIRSRYLAFKNMIH-DEREEIARPDSDKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRTTANGGITPSDFVTHILKKFGGHVGPSNSAEDCSRNSVAWNDIGVAVSHVFRAGYGCCTMMAPMDAKIKQRKVINRRKPVRPTELARPEELCGGSGEEIAETDKLMLTMFNILRINKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVRTVGVGEELMPHRNSESQ 321          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|I1JNK0|I1JNK0_SOYBN (Non-structural maintenance of chromosomes element 4 OS=Glycine max OX=3847 GN=100781485 PE=3 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 6.076e-136
Identity = 204/293 (69.62%), Postives = 239/293 (81.57%), Query Frame = 0
Query:   37 HQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRI-NRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRN--IQSQT 323
            HQT   RR +RSRYL+VKNMIH DE E IA+ DS  F  IFNE+E LHQ VT  R+QVADA+ALLD+T+SLV+S K  + GGLTPS FVTHI++KFG + G S S ED   NS+AWKDIGVAVS VF  G GC TM G M++KIKQ+++ NR+KR++PTELARP+EL  GS EERT+TDK M+TMFNILR NK VKLENL+LN+NSFAQTVENLFALSFLV+DGRAEIKV++AG  LVSPRNAP A SVVS+DVA SHFVFR D+ DWK+MV SV VGEELMPHR+  +QSQT
Sbjct:   28 HQTPKGRRGIRSRYLSVKNMIH-DEREEIARADSHKFNLIFNEMETLHQLVTKPREQVADAKALLDITQSLVMSVKNIAIGGLTPSDFVTHILKKFGGQAGPSNSTEDFSRNSVAWKDIGVAVSRVFRAGCGCYTMIGAMDAKIKQRKVYNRRKRVRPTELARPKELGGGSGEERTETDKHMITMFNILRINKFVKLENLILNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWLLVSPRNAPAANSVVSRDVAFSHFVFRFDFNDWKLMVCSVGVGEELMPHRDSQLQSQT 319          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LBS9|A0A445LBS9_GLYSO (Non-structural maintenance of chromosomes element 4 OS=Glycine soja OX=3848 GN=D0Y65_007158 PE=3 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 1.473e-135
Identity = 203/293 (69.28%), Postives = 239/293 (81.57%), Query Frame = 0
Query:   37 HQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDC--NSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRI-NRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRN--IQSQT 323
            HQT   RR +RSRYL+VKNMIH DE E IA+ DS  F  IFNE+E LHQ VT  R+QVADA+ALLD+T+SLV+S K  + GGLTPS FVTHI++KFG + G S S ED   NS+AWKDIGVAVS VF  G GC TM G M++KIKQ+++ NR+KR++PTELARP+EL  GS EERT+TDK M+TMFNILR NK VKLENL+LN+NSFAQTVENLFALSFLV+DGRAEIKV++AG  +VSPRNAP A SVVS+DVA SHFVFR D+ DWK+MV SV VGEELMPHR+  +QSQT
Sbjct:   28 HQTPKGRRGIRSRYLSVKNMIH-DEREEIARADSHKFNLIFNEMETLHQLVTKPREQVADAKALLDITQSLVMSVKNIAIGGLTPSDFVTHILKKFGGQAGPSNSTEDFSRNSVAWKDIGVAVSRVFRAGCGCYTMIGAMDAKIKQRKVYNRRKRVRPTELARPKELGGGSGEERTETDKHMITMFNILRINKFVKLENLILNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWLIVSPRNAPAANSVVSRDVAFSHFVFRFDFNDWKLMVCSVGVGEELMPHRDSQLQSQT 319          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C689|NSE4A_ARATH (Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana OX=3702 GN=NSE4A PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 1.940e-96
Identity = 151/280 (53.93%), Postives = 195/280 (69.64%), Query Frame = 0
Query:   43 RRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDCN--SIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQ-KRINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRN 318
            RR LRS+YL+++N I+ D  +++ K DS+ F  I N +ENLHQ V   R+Q+ADA+ALLD+  +L+ S K  S+ G++P+ FV  +I  FG+ G   I  ++    S+ WKD+G AV S      GCSTM GPM++++KQ KR   +KR KP E  RP+E+D+   EE+TDTDK M  MFNIL K K V+LENLVLN+ SFAQTVENLFALSFL KDGR EI VDK+G H   PRNAP A  V+S +V  +HFVFRLD+ DWK+M   V +GEELMPHR 
Sbjct:   59 RRILRSKYLSLQNEIN-DCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIANTLMSSVKSQSAHGVSPAEFVNALISGFGQ-GSLGIDTDETAQVSLKWKDLGFAVCSTVLVSCGCSTMLGPMDTELKQRKRAPNRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEMVPLGEELMPHRQ 336          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4JET1|NSE4B_ARATH (Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana OX=3702 GN=NSE4B PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 3.673e-90
Identity = 150/280 (53.57%), Postives = 192/280 (68.57%), Query Frame = 0
Query:   43 RRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSS-GGLTPSAFVTHIIEKFGKRGGTSISREDCN-SIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQK--RINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHR 317
            RRA+RS+YLA+ + I  D  +++ K DS  F SI NE+ENLHQ V   R+Q+ADA+ALLD+T S+V S K  S+ GG++P+ FV  +I  FGK      + E+   S+ WKD+G  V S      GC+TM GPM S++KQ+  R+  +KR KP    +PEE+D+   E+++DTD  M  MFNILRKNK VK+ENLVLN+ SFAQT EN+FALSFLVKDGR EI VD  G H V PRNAP A  V+S +VA +HFV R DY DW+ M + V VGEELMP R
Sbjct:   62 RRAIRSQYLALTHKIK-DAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVSMKWKDLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSHFVEPRNAPAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEELMPLR 340          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6BDR8|NSE4_SCHPO (Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nse4 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.617e-16
Identity = 70/294 (23.81%), Postives = 135/294 (45.92%), Query Frame = 0
Query:   43 RRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHI------IEKFGKR---------GGTSISREDCNSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRINRKKRLK--PTELARPEELDEGS-REERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHR 317
            +R LR RY  + N +    +E + + ++           NL++++TT  D  +   A  + T   ++  K      +   A   HI      IE F K            ++++R      AW  +G   S+        + M GP+  + K++ I R++RL+  P  L +P  L+E +   +  +T K +L +  +L+ ++ V     + N  S+ QTVENLF +SFL K+G+A +  +++G  ++  R  PT   VV+ ++     V  +    ++ +++   + E ++P R
Sbjct:    6 KRDLRKRYRNLINKVQESRLELVDEENN-----------NLYETITTANDLFSSVDAPTEATLDALLLTKTVDLASI--KARQLHIGRPKFNIELFTKNIKQFLNYPTSHSNVTRIQEIDTAWSRLGKLASNCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNITTQENNTTKNVLHISRLLQAHQPVNFLKFITNPQSYPQTVENLFYVSFLFKEGKAALVENESGILMLETRIPPTDDQVVAGEIRNIQLVLDMTMDLYENIIKEYNIKESIIPTR 286          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. Araport11
Match: AT1G51130.1 (| Nse4%2C component of Smc5/6 DNA repair complex | Chr1:18939480-18941560 REVERSE LENGTH=403 | 201606)

HSP 1 Score: 293.893 bits (751), Expect = 1.985e-97
Identity = 151/280 (53.93%), Postives = 195/280 (69.64%), Query Frame = 0
Query:   43 RRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDCN--SIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQ-KRINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHRN 318
            RR LRS+YL+++N I+ D  +++ K DS+ F  I N +ENLHQ V   R+Q+ADA+ALLD+  +L+ S K  S+ G++P+ FV  +I  FG+ G   I  ++    S+ WKD+G AV S      GCSTM GPM++++KQ KR   +KR KP E  RP+E+D+   EE+TDTDK M  MFNIL K K V+LENLVLN+ SFAQTVENLFALSFL KDGR EI VDK+G H   PRNAP A  V+S +V  +HFVFRLD+ DWK+M   V +GEELMPHR 
Sbjct:   59 RRILRSKYLSLQNEIN-DCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIANTLMSSVKSQSAHGVSPAEFVNALISGFGQ-GSLGIDTDETAQVSLKWKDLGFAVCSTVLVSCGCSTMLGPMDTELKQRKRAPNRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEMVPLGEELMPHRQ 336          
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. Araport11
Match: AT3G20760.1 (| Nse4%2C component of Smc5/6 DNA repair complex | Chr3:7257187-7258891 REVERSE LENGTH=383 | 201606)

HSP 1 Score: 277.33 bits (708), Expect = 3.758e-91
Identity = 150/280 (53.57%), Postives = 192/280 (68.57%), Query Frame = 0
Query:   43 RRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSS-GGLTPSAFVTHIIEKFGKRGGTSISREDCN-SIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQK--RINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSV-VGEELMPHR 317
            RRA+RS+YLA+ + I  D  +++ K DS  F SI NE+ENLHQ V   R+Q+ADA+ALLD+T S+V S K  S+ GG++P+ FV  +I  FGK      + E+   S+ WKD+G  V S      GC+TM GPM S++KQ+  R+  +KR KP    +PEE+D+   E+++DTD  M  MFNILRKNK VK+ENLVLN+ SFAQT EN+FALSFLVKDGR EI VD  G H V PRNAP A  V+S +VA +HFV R DY DW+ M + V VGEELMP R
Sbjct:   62 RRAIRSQYLALTHKIK-DAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRIDADENTQVSMKWKDLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSHFVEPRNAPAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEELMPLR 340          
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7KVC7|G7KVC7_MEDTR6.932e-16772.48Non-structural maintenance of chromosomes element ... [more]
tr|A0A1S2XRV9|A0A1S2XRV9_CICAR1.418e-16375.56Non-structural maintenance of chromosomes element ... [more]
tr|A0A3Q7YD65|A0A3Q7YD65_CICAR6.229e-16175.24Non-structural maintenance of chromosomes element ... [more]
tr|A0A2K3NW38|A0A2K3NW38_TRIPR5.507e-15878.23Non-structural maintenance of chromosomes element ... [more]
tr|A0A2Z6N2U3|A0A2Z6N2U3_TRISU1.052e-14975.50Non-structural maintenance of chromosomes element ... [more]
tr|A0A396H585|A0A396H585_MEDTR8.538e-14877.10Non-structural maintenance of chromosomes element ... [more]
tr|A0A1S2XTX2|A0A1S2XTX2_CICAR3.855e-14678.87Non-structural maintenance of chromosomes element ... [more]
tr|A0A4D6M7Z1|A0A4D6M7Z1_VIGUN3.857e-13668.37Non-structural maintenance of chromosomes element ... [more]
tr|I1JNK0|I1JNK0_SOYBN6.076e-13669.62Non-structural maintenance of chromosomes element ... [more]
tr|A0A445LBS9|A0A445LBS9_GLYSO1.473e-13569.28Non-structural maintenance of chromosomes element ... [more]
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BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q9C689|NSE4A_ARATH1.940e-9653.93Non-structural maintenance of chromosomes element ... [more]
sp|F4JET1|NSE4B_ARATH3.673e-9053.57Non-structural maintenance of chromosomes element ... [more]
sp|Q6BDR8|NSE4_SCHPO3.617e-1623.81Non-structural maintenance of chromosome element 4... [more]
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BLAST of Vfaba.Tiffany.R1.5g091640.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G51130.11.985e-9753.93| Nse4%2C component of Smc5/6 DNA repair complex |... [more]
AT3G20760.13.758e-9153.57| Nse4%2C component of Smc5/6 DNA repair complex |... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014854Non-structural maintenance of chromosome element 4, C-terminalPFAMPF08743Nse4_Ccoord: 228..308
e-value: 1.3E-22
score: 79.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..40
IPR027786Nse4/EID familyPANTHERPTHR16140UNCHARACTERIZEDcoord: 15..320

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.5g091640.1_tif_v1 ID=Vfaba.Tiffany.R1.5g091640.1_tif_v1; Name=Vfaba.Tiffany.R1.5g091640.1; organism=Vicia faba; type=mRNA; length=972bp
ATGCCTCGATCACACATTGATCACATCATCAAGGTGAAACGCGAAAAGAA
CATTAGTAGGAGAGATCATAACAGCAATGGCGTCGAAAACAACGACGACG
ACTTTGCTCATCAAACTAGTAACGCCCGTCGAGCTCTTCGTTCTCGGTAC
CTCGCCGTCAAGAACATGATTCACGGTGATGAAATGGAGAATATTGCAAA
GACTGACTCTGAAGTATTTGGTTCCATCTTCAATGAAATTGAGAACTTGC
ACCAATCAGTCACAACAACAAGAGACCAAGTAGCTGATGCACAGGCTCTT
TTGGATGTAACCAAATCCTTGGTAGTGTCTGCAAAAGGTCATTCTAGTGG
TGGACTCACTCCTTCAGCCTTTGTCACCCACATTATTGAAAAATTTGGAA
AACGGGGTGGAACAAGTATTAGCAGAGAAGATTGCAACTCAATAGCTTGG
AAGGATATTGGAGTTGCAGTTTCAAGTGTTTTTGGAGGGGGATATGGGTG
TTCTACAATGAATGGCCCAATGGAATCAAAAATAAAACAGAAAAGGATTA
ATAGAAAAAAGCGTTTGAAGCCCACTGAATTGGCACGGCCAGAAGAGCTT
GATGAAGGTTCAAGAGAAGAGAGAACTGATACTGATAAAACCATGTTAAC
TATGTTTAACATCTTAAGGAAGAATAAATCTGTCAAGCTTGAAAACTTGG
TTTTGAATAAGAACTCTTTTGCTCAAACGGTAGAGAACTTATTTGCTCTA
TCTTTTTTAGTCAAAGATGGGCGTGCTGAAATTAAAGTAGACAAGGCTGG
ACGTCATCTAGTTTCGCCAAGGAATGCTCCCACTGCAAAATCAGTTGTTT
CTAAGGATGTTGCTTTGAGCCACTTTGTGTTCCGACTTGACTATACTGAT
TGGAAGGTGATGGTTCGCTCTGTTGTTGGGGAGGAGTTGATGCCTCATAG
GAATATTCAATCACAAACTTAG
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protein sequence of Vfaba.Tiffany.R1.5g091640.1_tif_v1

>Vfaba.Tiffany.R1.5g091640.1_tif_v1 ID=Vfaba.Tiffany.R1.5g091640.1_tif_v1; Name=Vfaba.Tiffany.R1.5g091640.1_tif_v1; organism=Vicia faba; type=polypeptide; length=323bp
MPRSHIDHIIKVKREKNISRRDHNSNGVENNDDDFAHQTSNARRALRSRY
LAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQAL
LDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDCNSIAW
KDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRINRKKRLKPTELARPEEL
DEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFAL
SFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTD
WKVMVRSVVGEELMPHRNIQSQT
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mRNA from alignment at chr5:812954140..812957237+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.5g091640.1_tif_v1 ID=Vfaba.Tiffany.R1.5g091640.1_tif_v1; Name=Vfaba.Tiffany.R1.5g091640.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:812954140..812957237+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR014854Nse4_C
IPR027786Nse4/EID
Vocabulary: Cellular Component
TermDefinition
GO:0030915Smc5-Smc6 complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair