Vfaba.Tiffany.R1.5g097280.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MLV8|A0A2Z6MLV8_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_333510 PE=4 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 8.970e-93 Identity = 152/184 (82.61%), Postives = 160/184 (86.96%), Query Frame = 0 Query: 1 MAVAGSATF---STSLSTVSTLQNRHASQSKTFLGVPLCQSMSVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 MAV G+AT S+SLSTV LQNRHASQ TFL VPLC M +TK KP HRF+VVAVTKGS ESSKSDEKIPSWAKPDS EPPPWA+NEAQN + SE GFEIPFY YLLASAITAIAAIGSIFEYVNQKPVFGVL SDS+FYAPLLGFFAFTGVPTSAFLWFKSV+AANKEAEEQDKRDGY Sbjct: 1 MAVTGTATATFSSSSLSTVRALQNRHASQHTTFLHVPLCHRMFLTKTKPLHRFVVVAVTKGSAESSKSDEKIPSWAKPDSDEPPPWAKNEAQN--KTGSEQGFEIPFYAYLLASAITAIAAIGSIFEYVNQKPVFGVLGSDSVFYAPLLGFFAFTGVPTSAFLWFKSVQAANKEAEEQDKRDGY 182
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072U2A7|A0A072U2A7_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=25499186 PE=4 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 6.575e-92 Identity = 155/181 (85.64%), Postives = 164/181 (90.61%), Query Frame = 0 Query: 1 MAVAGSATFSTSLSTVSTLQNRHASQSKTFLGVPLCQSMSVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 MAVA S+TFS+SLSTV TLQNRHASQ TFLG+PLCQ ++ KK PH+FL VAVTKGS ESSKSDEKIPSWAKPDS EPPPWAQNEAQN SSS + GF IPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDS+FYAPLLGFFAFTGVPTSAFLWFKSV+AANKEAEEQDKRDGY Sbjct: 1 MAVAASSTFSSSLSTVCTLQNRHASQPTTFLGIPLCQKTFLSNKKSPHKFLTVAVTKGSAESSKSDEKIPSWAKPDSEEPPPWAQNEAQNKPSSSEQQGFVIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSVFYAPLLGFFAFTGVPTSAFLWFKSVQAANKEAEEQDKRDGY 181
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MML5|A0A2K3MML5_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g015134 PE=4 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.464e-90 Identity = 151/184 (82.07%), Postives = 159/184 (86.41%), Query Frame = 0 Query: 1 MAVAGS--ATFSTS-LSTVSTLQNRHASQSKTFLGVPLCQSMSVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 MAV G+ ATFS+S LSTV LQNRHASQ TFL VP+C M +TK KP HRF+VVAVTKGS ESSKSDEKIPSWAKPDS EPPPWA+NEAQN + SS GFEIPFY YLLASAITAIAAIGSIFEYVNQKPVFGVL SDSIFYAPLLGFFA TGVPTSAFLWFKSV+ ANKEAEEQDKRDGY Sbjct: 1 MAVTGTGTATFSSSSLSTVYALQNRHASQHTTFLDVPICHRMFLTKTKPQHRFVVVAVTKGSAESSKSDEKIPSWAKPDSDEPPPWAKNEAQNKTGSS---GFEIPFYAYLLASAITAIAAIGSIFEYVNQKPVFGVLGSDSIFYAPLLGFFALTGVPTSAFLWFKSVQTANKEAEEQDKRDGY 181
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XS64|A0A1S2XS64_CICAR (uncharacterized protein LOC101501263 OS=Cicer arietinum OX=3827 GN=LOC101501263 PE=4 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 1.556e-87 Identity = 141/182 (77.47%), Postives = 163/182 (89.56%), Query Frame = 0 Query: 1 MAVAGSA-TFSTSLSTVSTLQNRHASQSKTFLGVPLCQSMSVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 MAVAGSA TF +SL T+ QNR+ASQS T L VPLCQ + +TK+K PHRF+VVAVT+GS ESSKSDE IPSWAKPDS EPPPWA++EAQ+ ++S+ + GF+IPFY YLLASAITAIAAIGSIFEY+NQKPVFG+LSSDS+FYAPLLGFFAFTG+P+SAFLWFKSV+AANKEAEEQDKRDGY Sbjct: 1 MAVAGSAATFLSSLPTIHAFQNRNASQSTTVLCVPLCQRIFLTKRKSPHRFVVVAVTQGSAESSKSDENIPSWAKPDSDEPPPWARDEAQSKTASTQQ-GFDIPFYAYLLASAITAIAAIGSIFEYLNQKPVFGLLSSDSVFYAPLLGFFAFTGIPSSAFLWFKSVQAANKEAEEQDKRDGY 181
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SJ30|A0A151SJ30_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_000982 PE=4 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.206e-84 Identity = 128/181 (70.72%), Postives = 146/181 (80.66%), Query Frame = 0 Query: 1 MAVAGSATFSTSLSTVSTLQNRHASQSKTFLGVPLCQSMSVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 MA +G +F T LS + N+HAS T GV +K KPP R +VVAVT+GSTESSKSDEKIPSWAKPDS+EPPPWA++E N +S+ GFEIPFY YLLASAITAIAA+GSIFEYVNQ+PVFGVLSSDS+FYAPLLGFF FTG+P+SAFLWFKSV+AANKEAEEQDKRDGY Sbjct: 1 MAASGGCSFLT-LSCAGAVPNQHASHPTTLFGV---SQFHQSKIKPPRRLVVVAVTQGSTESSKSDEKIPSWAKPDSNEPPPWARDEPNN---KNSQQGFEIPFYAYLLASAITAIAAVGSIFEYVNQRPVFGVLSSDSVFYAPLLGFFVFTGIPSSAFLWFKSVQAANKEAEEQDKRDGY 174
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|I3SSU6|I3SSU6_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 2.248e-79 Identity = 122/180 (67.78%), Postives = 146/180 (81.11%), Query Frame = 0 Query: 3 VAGSATFSTSLSTVSTLQNRHASQSKTFLGVPLCQSMSV-TKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 +A SAT T+ ++ ++QN+HAS FLGVP CQS +KKPP + +VVAVTK SDEK+PSWAKPDS EPPPWA++EA N ++SSS GFE+PFYVYLLASAITAIAA+GSIFEYVNQKPVFG+L DS+FYAP+LGFFAFTG+P+S FLW+KSV+ ANKEAEEQDKRDGY Sbjct: 1 MAASAT--TTFFSLPSIQNQHASLPTPFLGVPQCQSKFFGIRKKPPQKLVVVAVTK------DSDEKVPSWAKPDSDEPPPWARDEANNKTASSS--GFEVPFYVYLLASAITAIAAVGSIFEYVNQKPVFGLLPYDSVFYAPVLGFFAFTGIPSSIFLWYKSVQTANKEAEEQDKRDGY 170
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LC42|A0A445LC42_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007298 PE=4 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 9.592e-76 Identity = 129/181 (71.27%), Postives = 146/181 (80.66%), Query Frame = 0 Query: 1 MAVAGSATFSTSLSTVSTLQNRHASQSKTFLGVPLCQSMSVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 MA + + +LS +QN+H S TFLGVP + K+K PHR +VVAVT+GS ESSKSDEKIPSWAKPDS EPPPWA++E N +SS + GFEIPFY YL ASAITAIAAIGSIFEYVNQKPVFGVLSSDS+FYAPLLGFF FTG+P+SAFLWFKSV+AANKEAEEQDKRDGY Sbjct: 1 MAASDGCSSFLTLSCAGAVQNQHVSHPTTFLGVP---KNNQRKRKTPHRLVVVAVTQGSAESSKSDEKIPSWAKPDSDEPPPWARDEPNN--NSSQQEGFEIPFYAYLFASAITAIAAIGSIFEYVNQKPVFGVLSSDSVFYAPLLGFFVFTGIPSSAFLWFKSVQAANKEAEEQDKRDGY 176
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|C6SXN7|C6SXN7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100499876 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 9.592e-76 Identity = 129/181 (71.27%), Postives = 146/181 (80.66%), Query Frame = 0 Query: 1 MAVAGSATFSTSLSTVSTLQNRHASQSKTFLGVPLCQSMSVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 MA + + +LS +QN+H S TFLGVP + K+K PHR +VVAVT+GS ESSKSDEKIPSWAKPDS EPPPWA++E N +SS + GFEIPFY YL ASAITAIAAIGSIFEYVNQKPVFGVLSSDS+FYAPLLGFF FTG+P+SAFLWFKSV+AANKEAEEQDKRDGY Sbjct: 1 MAASDGCSSFLTLSCAGAVQNQHVSHPTTFLGVP---KNNQRKRKTPHRLVVVAVTQGSAESSKSDEKIPSWAKPDSDEPPPWARDEPNN--NSSQQEGFEIPFYAYLFASAITAIAAIGSIFEYVNQKPVFGVLSSDSVFYAPLLGFFVFTGIPSSAFLWFKSVQAANKEAEEQDKRDGY 176
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6I9Q803|A0A6I9Q803_ELAGV (uncharacterized protein LOC105032064 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105032064 PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 3.769e-74 Identity = 105/135 (77.78%), Postives = 125/135 (92.59%), Query Frame = 0 Query: 48 HRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGYK 182 HRF+V+A+T+GST+SS+SDEKIPSWA+PDS EPPPWA++E G+ S+S EIPFYVYLLASA+TAIAAIGS+FEYVNQ+PVFGVLSSDS+FYAPLLGFFAFTG+PTSAFLWFKSV+AANK +EEQD+RDGY+ Sbjct: 57 HRFVVLAITEGSTKSSQSDEKIPSWARPDSDEPPPWARDE---GNDSTSPQTIEIPFYVYLLASAVTAIAAIGSVFEYVNQRPVFGVLSSDSVFYAPLLGFFAFTGIPTSAFLWFKSVQAANKASEEQDRRDGYR 188
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P6RL36|A0A2P6RL36_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0096661 PE=4 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.325e-73 Identity = 118/191 (61.78%), Postives = 142/191 (74.35%), Query Frame = 0 Query: 3 VAGSATFSTSLSTVSTLQNRHASQSKTFLGV------PLCQSM-----SVTKKKPPHRFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGYK 182 +A + S + + +N + K+F+GV P S+ S K+ H+F V AVTKGS +SSKSDEKIP WA+PDS EPPPWAQ+E G S+ GFE+PFYVYLLASA+TAIAAIGS+FEYVN KPVFGVL+SDSIFYAP+LGFFAFTG+PTSAFLWF+SV+AANKEAEEQDKRDGY+ Sbjct: 1 MAATLLVSCNPNVNHACRNDNPPLPKSFMGVGHKILDPTRASVNQGHYSSQTKRSSHQFSVSAVTKGSAKSSKSDEKIPLWARPDSEEPPPWAQSE---GKKDDSKEGFEVPFYVYLLASAVTAIAAIGSVFEYVNDKPVFGVLNSDSIFYAPVLGFFAFTGIPTSAFLWFRSVQAANKEAEEQDKRDGYR 188
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. Araport11
Match: AT3G51510.1 (| transmembrane protein | Chr3:19109118-19109842 FORWARD LENGTH=181 | 201606) HSP 1 Score: 174.866 bits (442), Expect = 7.783e-56 Identity = 94/133 (70.68%), Postives = 109/133 (81.95%), Query Frame = 0 Query: 49 RFLVVAVTKGSTESSKSDEKIPSWAKPDSSEPPPWAQNEAQNGSSSSSELGFEIPFYVYLLASAITAIAAIGSIFEYVNQKPVFGVLSSDSIFYAPLLGFFAFTGVPTSAFLWFKSVEAANKEAEEQDKRDGY 181 R +V A T+GS KS E PSWA PDS EPPPWA+NE G SS+S+ FE+PF+VYLLASAITAIAAIGS+FEY ++ PVFG+L SDSIFY P+LGFFA TG+PTS FLWFKSVEAANKEA+EQDKRDG+ Sbjct: 54 RLVVTAATEGS---KKSKESEPSWANPDSDEPPPWARNE---GRSSTSQESFEVPFFVYLLASAITAIAAIGSVFEYTSKNPVFGILESDSIFYTPVLGFFALTGIPTSVFLWFKSVEAANKEAQEQDKRDGF 180 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Tiffany.R1.5g097280.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.5g097280.1_tif_v1 ID=Vfaba.Tiffany.R1.5g097280.1_tif_v1; Name=Vfaba.Tiffany.R1.5g097280.1; organism=Vicia faba; type=mRNA; length=549bpback to top protein sequence of Vfaba.Tiffany.R1.5g097280.1_tif_v1 >Vfaba.Tiffany.R1.5g097280.1_tif_v1 ID=Vfaba.Tiffany.R1.5g097280.1_tif_v1; Name=Vfaba.Tiffany.R1.5g097280.1_tif_v1; organism=Vicia faba; type=polypeptide; length=182bpback to top mRNA from alignment at chr5:869553791..869554604+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.5g097280.1_tif_v1 ID=Vfaba.Tiffany.R1.5g097280.1_tif_v1; Name=Vfaba.Tiffany.R1.5g097280.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:869553791..869554604+ (Vicia fababack to top |