Vfaba.Tiffany.R1.5g146920.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392QL66|A0A392QL66_9FABA (Pentatricopeptide repeat-containing protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 1.573e-78 Identity = 110/121 (90.91%), Postives = 117/121 (96.69%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTL 121
MSIRWPRVLNPT LSQII TQKNPLKAL+IFN+AKSKYPKYSHNGP+YATMITILG+S RLKEM+DLIEQMKQDSCECKDS+FVSAIKTYAK+GLVDEAI LYKNIPQFNCVNWTQSFNTL
Sbjct: 1 MSIRWPRVLNPTYLSQIIRTQKNPLKALDIFNEAKSKYPKYSHNGPVYATMITILGTSGRLKEMRDLIEQMKQDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNTL 121
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LFL9|A0A2K3LFL9_TRIPR (Pentatricopeptide repeat-containing protein at1g05600-like protein OS=Trifolium pratense OX=57577 GN=L195_g033303 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.509e-76 Identity = 113/125 (90.40%), Postives = 121/125 (96.80%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIM 125
MSIRWPRVLNPT LSQII TQKNPLKAL+IFN+AKSKYPKYSHNGP+YATMITILG+S RLKEM+DLIEQMKQDSCECKDS+FVSAIKTYAK+GLVDEAI LYKNIPQFNCVNWTQSFN+LLEIM
Sbjct: 1 MSIRWPRVLNPTYLSQIIRTQKNPLKALDIFNEAKSKYPKYSHNGPVYATMITILGTSGRLKEMRDLIEQMKQDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNSLLEIM 125
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NVR7|A0A2Z6NVR7_TRISU (PPR_long domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_297260 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.440e-75 Identity = 111/125 (88.80%), Postives = 120/125 (96.00%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIM 125
MSIRWPRVLNPT LSQII TQKNPLKAL+IFN+AKSKYP+YSHNGP+YATMITILG+S RLKEM+DLIEQMKQDSCECKDS+FVSAIKTYAK+GLVDEAI LYKNIPQ+NCVNWTQSFN LLEIM
Sbjct: 1 MSIRWPRVLNPTYLSQIIRTQKNPLKALDIFNEAKSKYPEYSHNGPVYATMITILGTSGRLKEMRDLIEQMKQDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQYNCVNWTQSFNILLEIM 125
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|G7JZ89|G7JZ89_MEDTR (PPR containing plant-like protein OS=Medicago truncatula OX=3880 GN=11432583 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.112e-74 Identity = 111/125 (88.80%), Postives = 118/125 (94.40%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIM 125
MSIRWPRVLNPT L+QII TQKNPLKALEIFN+AK KYPKYSHNGP+YATMI ILG+S RLKEM DLIEQMK+DSCECKDS+FVSAIKTYAK+GLVDEAI LYKNIPQFNCVNWTQSFNTLLEIM
Sbjct: 3 MSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSGRLKEMSDLIEQMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNTLLEIM 127
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Z0B9|A0A1S2Z0B9_CICAR (pentatricopeptide repeat-containing protein At1g05600 OS=Cicer arietinum OX=3827 GN=LOC101501143 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 8.621e-72 Identity = 108/125 (86.40%), Postives = 116/125 (92.80%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIM 125
MSIRWPRVL PT LSQII TQKNPLKAL+IFN+AKSKYPKYSHNGP+YATMITILG+S RLKEMK++IEQMK DSCECKDS+FVS IK YAK GLVDEAI LYKNIP+FNCVNWTQSFNTLLEIM
Sbjct: 1 MSIRWPRVLTPTYLSQIIRTQKNPLKALQIFNEAKSKYPKYSHNGPVYATMITILGTSGRLKEMKEVIEQMKDDSCECKDSVFVSVIKMYAKVGLVDEAIGLYKNIPRFNCVNWTQSFNTLLEIM 125
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SHB8|A0A0B2SHB8_GLYSO (Pentatricopeptide repeat-containing protein OS=Glycine soja OX=3848 GN=glysoja_027720 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.613e-68 Identity = 101/134 (75.37%), Postives = 117/134 (87.31%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRFGVA 134
MSIRWPRVL PT LSQII TQKNPLKAL IFN+AKS+YP Y HNGP+YATMI+ILG+S RL EM+D+IEQMK+DSCECKDS+FVS IKTYA GLVDEAI LYK+IP+FNCVNWT+SFNT+L+IM + R +A
Sbjct: 1 MSIRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGRLNEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNTMLQIMVKENRLEIA 134
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VHP6|A0A0L9VHP6_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g039000 PE=4 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 7.627e-68 Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRFGVA 134
MSIRWPR L PT LSQII TQKNP+KAL IFN+AKS+YP Y HNGP+YATMI ILG+S RL EM+D+IEQM++DSCECKDS+FVS IKTYA G VDEA+ LYK IPQFNCVNWT+SFNT+L+IM R +A
Sbjct: 1 MSIRWPRRLTPTYLSQIIRTQKNPIKALHIFNEAKSRYPNYCHNGPVYATMINILGTSGRLTEMRDVIEQMREDSCECKDSVFVSVIKTYANAGQVDEAMSLYKTIPQFNCVNWTESFNTILQIMVNENRLEMA 134
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RE76|A0A151RE76_CAJCA (Pentatricopeptide repeat-containing protein At1g05600 family OS=Cajanus cajan OX=3821 GN=KK1_037817 PE=4 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.069e-67 Identity = 99/125 (79.20%), Postives = 110/125 (88.00%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIM 125
MSIRWPRVL PT LSQII TQKNPLKAL IFN AKSKYP Y HNGP+YATMI+ILG+S RL EM+D+IEQM+ DSCECKDS+FVS IKTYA G+VDEA+ LYK+IP FNCVNWTQSFNT+LEIM
Sbjct: 1 MSIRWPRVLTPTYLSQIIKTQKNPLKALHIFNHAKSKYPNYCHNGPVYATMISILGTSGRLTEMRDVIEQMRNDSCECKDSLFVSVIKTYANAGMVDEALSLYKSIPHFNCVNWTQSFNTMLEIM 125
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|I1L425|I1L425_SOYBN (PPR_long domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_09G172300 PE=3 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 1.045e-66 Identity = 99/132 (75.00%), Postives = 115/132 (87.12%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRFGVA 134
IRWPRVL PT LSQII TQKNPLKAL IFN+AKS+YP Y HNGP+YATMI+ILG+S RL EM+D+IEQMK+DSCECKDS+FVS IKTYA GLVDEAI LYK+IP+FNCVNWT+SFNT+L+IM + R +A
Sbjct: 5 IRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGRLNEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNTMLQIMVKENRLEIA 136
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Match: tr|V7C3C8|V7C3C8_PHAVU (PPR_long domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G147700g PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.500e-66 Identity = 99/134 (73.88%), Postives = 114/134 (85.07%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRFGVA 134
MSIRWPRVL PT LSQII TQKNP+KAL IFN+AKS+YP Y HNGP+YATMI+ILG+S RL EMKD+IEQM++DSCECKDS+FVS IKTYA G VDEA+ LYK IPQFNCVNWT+SFNT+L+IM R +A
Sbjct: 1 MSIRWPRVLTPTYLSQIIRTQKNPIKALHIFNEAKSRYPNYHHNGPVYATMISILGTSGRLTEMKDVIEQMREDSCECKDSVFVSVIKTYANAGQVDEAMSLYKTIPQFNCVNWTESFNTILQIMVNENRLEMA 134
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SYK1|PPR11_ARATH (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.410e-49 Identity = 73/127 (57.48%), Postives = 105/127 (82.68%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLL-EIMEES 128
+RWPRVL P+ LSQI+ QKNP+ AL++F +AK ++P Y HNG +YATMI ILG S+R+ EMK +IE+MK+DSCECKDS+F S I+T+++ G +++AI L+K++ +FNCVNW+ SF+TLL E+++ES
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKES 130
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SS81|PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.506e-16 Identity = 34/127 (26.77%), Postives = 75/127 (59.06%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQ-FNCVNWTQSFNTLLEIMEES 128
+ +P+ L+P + +++ ++KNP A +F+ A +++P Y+H+ +Y ++ L + + + ++E ++ C+C + + +S IKTY K + D+A+ ++K + + F C +S+NTLL E+
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSA-TRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LQQ1|PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07740 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.194e-12 Identity = 36/121 (29.75%), Postives = 66/121 (54.55%), Query Frame = 0 Query: 5 WPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIM 125
W V T L +I ++P +AL +F+Q + + H+ P Y+++I L S + ++ ++ + C++S+F+ I+ Y K G VD+AI ++ I F+CV QS NTL+ ++
Sbjct: 47 WEEVPFLTDLKEI----EDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVL 161
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FFE3|PP388_ARATH (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.805e-12 Identity = 34/129 (26.36%), Postives = 68/129 (52.71%), Query Frame = 0 Query: 5 WPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQD--SCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRF 131
WP+ L P +L +IT Q+N AL+IF A +P ++HN Y +++ L + ++ L+ ++ +C +++F+ ++ Y G + ++ ++ IP F +S NTLL ++ ++ RF
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9CA58|PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 4.635e-12 Identity = 34/127 (26.77%), Postives = 72/127 (56.69%), Query Frame = 0 Query: 9 LNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQD-SCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRFGVA 134
L P ++ +I QK+P+KALE+FN + K + H Y ++I LG + + M++++ M+++ + ++V A+K Y ++G V EA+ +++ + ++C S+N ++ ++ +S F A
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQA 130
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FNL2|PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 4.245e-11 Identity = 31/135 (22.96%), Postives = 75/135 (55.56%), Query Frame = 0 Query: 1 MSIRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPK-YSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRFGVA 134
M +W + + P+Q+ +++ +K+ K++ +F+ A ++Y Y H+ + M+ L S+++ K +DLI +MK ++C + I +S + Y + +++ ++ + F+C +++ T+L I+ E + +A
Sbjct: 6 MMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLA 140
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT1G05600.3 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr1:1672161-1673675 FORWARD LENGTH=504 | 201606) HSP 1 Score: 168.703 bits (426), Expect = 1.442e-50 Identity = 73/127 (57.48%), Postives = 105/127 (82.68%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLL-EIMEES 128
+RWPRVL P+ LSQI+ QKNP+ AL++F +AK ++P Y HNG +YATMI ILG S+R+ EMK +IE+MK+DSCECKDS+F S I+T+++ G +++AI L+K++ +FNCVNW+ SF+TLL E+++ES
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKES 130
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT1G05600.2 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr1:1672161-1673675 FORWARD LENGTH=504 | 201606) HSP 1 Score: 168.703 bits (426), Expect = 1.442e-50 Identity = 73/127 (57.48%), Postives = 105/127 (82.68%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLL-EIMEES 128
+RWPRVL P+ LSQI+ QKNP+ AL++F +AK ++P Y HNG +YATMI ILG S+R+ EMK +IE+MK+DSCECKDS+F S I+T+++ G +++AI L+K++ +FNCVNW+ SF+TLL E+++ES
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKES 130
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT1G05600.1 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr1:1672161-1673675 FORWARD LENGTH=504 | 201606) HSP 1 Score: 168.703 bits (426), Expect = 1.442e-50 Identity = 73/127 (57.48%), Postives = 105/127 (82.68%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLL-EIMEES 128
+RWPRVL P+ LSQI+ QKNP+ AL++F +AK ++P Y HNG +YATMI ILG S+R+ EMK +IE+MK+DSCECKDS+F S I+T+++ G +++AI L+K++ +FNCVNW+ SF+TLL E+++ES
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKES 130
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT3G09060.2 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:2766367-2768430 REVERSE LENGTH=687 | 201606) HSP 1 Score: 77.411 bits (189), Expect = 3.586e-17 Identity = 34/127 (26.77%), Postives = 75/127 (59.06%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQ-FNCVNWTQSFNTLLEIMEES 128
+ +P+ L+P + +++ ++KNP A +F+ A +++P Y+H+ +Y ++ L + + + ++E ++ C+C + + +S IKTY K + D+A+ ++K + + F C +S+NTLL E+
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSA-TRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT3G09060.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr3:2766367-2768430 REVERSE LENGTH=687 | 201606) HSP 1 Score: 77.411 bits (189), Expect = 3.586e-17 Identity = 34/127 (26.77%), Postives = 75/127 (59.06%), Query Frame = 0 Query: 3 IRWPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQ-FNCVNWTQSFNTLLEIMEES 128
+ +P+ L+P + +++ ++KNP A +F+ A +++P Y+H+ +Y ++ L + + + ++E ++ C+C + + +S IKTY K + D+A+ ++K + + F C +S+NTLL E+
Sbjct: 2 VVFPKSLSPKHVLKLLKSEKNPRAAFALFDSA-TRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEA 127
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT1G07740.1 (| Tetratricopeptide repeat (TPR)-like superfamily protein | Chr1:2399117-2400496 REVERSE LENGTH=459 | 201606) HSP 1 Score: 67.3958 bits (163), Expect = 1.222e-13 Identity = 36/121 (29.75%), Postives = 66/121 (54.55%), Query Frame = 0 Query: 5 WPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQDSCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIM 125
W V T L +I ++P +AL +F+Q + + H+ P Y+++I L S + ++ ++ + C++S+F+ I+ Y K G VD+AI ++ I F+CV QS NTL+ ++
Sbjct: 47 WEEVPFLTDLKEI----EDPEEALSLFHQYQEM--GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVL 161
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT5G16420.4 (| Pentatricopeptide repeat (PPR-like) superfamily protein | Chr5:5368034-5369641 FORWARD LENGTH=535 | 201606) HSP 1 Score: 66.6254 bits (161), Expect = 1.847e-13 Identity = 34/129 (26.36%), Postives = 68/129 (52.71%), Query Frame = 0 Query: 5 WPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQD--SCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRF 131
WP+ L P +L +IT Q+N AL+IF A +P ++HN Y +++ L + ++ L+ ++ +C +++F+ ++ Y G + ++ ++ IP F +S NTLL ++ ++ RF
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT5G16420.3 (| Pentatricopeptide repeat (PPR-like) superfamily protein | Chr5:5368034-5369641 FORWARD LENGTH=535 | 201606) HSP 1 Score: 66.6254 bits (161), Expect = 1.847e-13 Identity = 34/129 (26.36%), Postives = 68/129 (52.71%), Query Frame = 0 Query: 5 WPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQD--SCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRF 131
WP+ L P +L +IT Q+N AL+IF A +P ++HN Y +++ L + ++ L+ ++ +C +++F+ ++ Y G + ++ ++ IP F +S NTLL ++ ++ RF
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT5G16420.2 (| Pentatricopeptide repeat (PPR-like) superfamily protein | Chr5:5368034-5369641 FORWARD LENGTH=535 | 201606) HSP 1 Score: 66.6254 bits (161), Expect = 1.847e-13 Identity = 34/129 (26.36%), Postives = 68/129 (52.71%), Query Frame = 0 Query: 5 WPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQD--SCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRF 131
WP+ L P +L +IT Q+N AL+IF A +P ++HN Y +++ L + ++ L+ ++ +C +++F+ ++ Y G + ++ ++ IP F +S NTLL ++ ++ RF
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Match: AT5G16420.1 (| Pentatricopeptide repeat (PPR-like) superfamily protein | Chr5:5368034-5369641 FORWARD LENGTH=535 | 201606) HSP 1 Score: 66.6254 bits (161), Expect = 1.847e-13 Identity = 34/129 (26.36%), Postives = 68/129 (52.71%), Query Frame = 0 Query: 5 WPRVLNPTQLSQIITTQKNPLKALEIFNQAKSKYPKYSHNGPIYATMITILGSSSRLKEMKDLIEQMKQD--SCECKDSIFVSAIKTYAKQGLVDEAILLYKNIPQFNCVNWTQSFNTLLEIMEESIRF 131
WP+ L P +L +IT Q+N AL+IF A +P ++HN Y +++ L + ++ L+ ++ +C +++F+ ++ Y G + ++ ++ IP F +S NTLL ++ ++ RF
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171 The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot) Total hits: 6 Position : 0 Zoom : x 1
BLAST of Vfaba.Tiffany.R1.5g146920.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Tiffany.R1.5g146920.1_tif_v1 ID=Vfaba.Tiffany.R1.5g146920.1_tif_v1; Name=Vfaba.Tiffany.R1.5g146920.1; organism=Vicia faba; type=mRNA; length=441bpback to top protein sequence of Vfaba.Tiffany.R1.5g146920.1_tif_v1 >Vfaba.Tiffany.R1.5g146920.1_tif_v1 ID=Vfaba.Tiffany.R1.5g146920.1_tif_v1; Name=Vfaba.Tiffany.R1.5g146920.1_tif_v1; organism=Vicia faba; type=polypeptide; length=146bpback to top mRNA from alignment at chr5:1258765113..1258765666- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Tiffany.R1.5g146920.1_tif_v1 ID=Vfaba.Tiffany.R1.5g146920.1_tif_v1; Name=Vfaba.Tiffany.R1.5g146920.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1258765113..1258765666- (Vicia fababack to top Annotated Terms
The
following terms have been associated with
this mRNA:
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