Vfaba.Tiffany.R1.6g004520.1

Transcript Overview
NameVfaba.Tiffany.R1.6g004520.1
Unique NameVfaba.Tiffany.R1.6g004520.1_tif_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length696
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6chromosomechr6:46955749..46956444 +Vicia faba cv. Tiffany genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
tifzwsR524Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR551Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR553Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifzwsR569Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
astifL165Vigna angularis Jingnong 6 genome v1.1Vigna angularis
astifL682Vigna angularis Jingnong 6 genome v1.1Vigna angularis
catifL071Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL086Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
catifL566Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cctifL0851Cajanus cajan Asha genome v1.0Cajanus cajan
cctifL0869Cajanus cajan Asha genome v1.0Cajanus cajan
crtifL561Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crtifL683Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
tiftifL136Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifL186Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvtifL192Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL552Pisum sativum Cameor genome v1aPisum sativum
pvtifL524Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pstifL798Pisum sativum Cameor genome v1aPisum sativum
tifvuR666Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR678Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR679Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvuR687Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
tifvfhR418Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuR725Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caitifL106Cicer arietinum ICC 4958 genome v2Cicer arietinum
caitifL121Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0301Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caitifL728Cicer arietinum ICC 4958 genome v2Cicer arietinum
antifL0590Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL1089Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL1167Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
antifL1181Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
tifvrvR640Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR649Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvrvR652Vigna radiata cv. VC1973A genome v6.0Vigna radiata
tifvuaR559Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR578Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvuaR613Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
tifvssR685Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR701Vicia sativa cv. Studenica genome v1.0Vicia sativa
tifvssR711Vicia sativa cv. Studenica genome v1.0Vicia sativa
cantifL071Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cantifL512Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun05g215700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_06545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004487229.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_03048Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg5703.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_00610.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-TanjilR_26601Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g271400.2Pisum sativum Cameor genome v1aPisum sativum
Cr_11533.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_02702.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_00303Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Phvul.005G104200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg43852.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr11.1019Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014638921.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.011G114400.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr05.2070Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat07G0503400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun11g104300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan05g149300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_14082Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat05G0751200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.6g006240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.6g004520Vfaba.Tiffany.R1.6g004520_tif_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.6g004520.1_tif_v1-exonVfaba.Tiffany.R1.6g004520.1_tif_v1-exon-chr6_tif_v1:46955749..46956444Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.6g004520.1_tif_v1-cdsVfaba.Tiffany.R1.6g004520.1_tif_v1-cds-chr6_tif_v1:46955749..46956444Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Tiffany.R1.6g004520.1_tif_v1Vfaba.Tiffany.R1.6g004520.1_tif_v1Vicia fabapolypeptide
Vfaba.Tiffany.R1.6g004520.1_tif_v1Vfaba.Tiffany.R1.6g004520.1_tif_v1-proteinVicia fabapolypeptide


Homology
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072U1G6|A0A072U1G6_MEDTR (E3 ubiquitin-protein ligase RMA1H1-like protein OS=Medicago truncatula OX=3880 GN=25502627 PE=4 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 4.255e-125
Identity = 181/246 (73.58%), Postives = 205/246 (83.33%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTTTD----SDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMD-----VPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTSYYSSPM------SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            MALDQYM++TVSQ D+FE+ PS K  KT+TD    SDRNAS+GFDCNICL+CVQDPVVTFCGHLYCWPCIYKW+ +Q+ ISS N EKQKPQCPVCKSELSQSSLVPLYGRGQ+ T SE +       VP+RP GPRS+N TTVSQPTYQ+Y HPRQFNSIP+SY  SPM      +LDN++GIFGEMIY R+FGNQ+ENMY Y NSYSFQG NNPR+RRHLMQVDKSL+RI FFL C LVLC+LLF
Sbjct:    1 MALDQYMDDTVSQIDTFEEKPSLKNWKTSTDVIADSDRNASSGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLDIQSGISSEN-EKQKPQCPVCKSELSQSSLVPLYGRGQTMTLSEGKAQQVGIVVPRRPTGPRSFNPTTVSQPTYQNYQHPRQFNSIPSSY-PSPMFSTSGSALDNTYGIFGEMIYGRMFGNQIENMYTYPNSYSFQGTNNPRMRRHLMQVDKSLNRISFFLFCSLVLCVLLF 244
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YLD9|A0A1S2YLD9_CICAR (E3 ubiquitin-protein ligase RMA1H1-like OS=Cicer arietinum OX=3827 GN=LOC101505584 PE=4 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 1.634e-109
Identity = 160/229 (69.87%), Postives = 187/229 (81.66%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTT----TDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMD-----VPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTS----YYSSPMSLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRI 216
            MALD Y+++T S    FED PS K  K +    TDSDRNAS GFDCNICL+CVQDPVVTFCGHLYCWPCIYKW+H++TS+ S  +E+QKPQCPVCKSELSQSSLVPLYGRGQ+ T SE +++     VPQRP GPRSYN TTVSQ +YQSY HP+QFNSIP+     + +S  +LDN++GIFGEMIYARVFGNQ+ENMY Y NSY+FQG+NN R+RRHLMQVDKSLSRI
Sbjct:    1 MALDGYIDDTAS----FEDQPSLKNWKPSKDGMTDSDRNASGGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLHLKTSVYSEYEEQQKPQCPVCKSELSQSSLVPLYGRGQTKTTSEEKVNQVGIVVPQRPSGPRSYNATTVSQSSYQSYRHPQQFNSIPSDPSRMFSTSGSALDNTYGIFGEMIYARVFGNQVENMYTYPNSYNFQGSNNSRMRRHLMQVDKSLSRI 225
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MR71|A0A2Z6MR71_TRISU (RING-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_271430 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.060e-103
Identity = 159/224 (70.98%), Postives = 181/224 (80.80%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTTTD----SDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEAR-------MDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTSYYSSPM------SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLM 207
            MALDQYM N  SQ DSFED PS K  KT+TD    SDR++S GFDCNICL+CVQDPVVTFCGHLYCWPCIYKW+H+Q+SI+S N+EKQKP+CPVCKSELSQSSLVPLYGRGQSTT SE +       + VP+RP GPR YN TTVSQPTYQ+Y+HP+QFNSIP S Y SPM      SLDN++GIFGEMIYA VFGNQ+ENMY Y NSYSF GNNNPR+   ++
Sbjct:    1 MALDQYMNNAASQLDSFEDKPSLKNWKTSTDVISDSDRSSSGGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLHVQSSITSENEEKQKPKCPVCKSELSQSSLVPLYGRGQSTTTSEGKSQTHQVGIVVPRRPTGPRLYNATTVSQPTYQTYHHPQQFNSIPNS-YPSPMFSTSGSSLDNTYGIFGEMIYASVFGNQVENMYTYPNSYSFIGNNNPRIVLGIL 223
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MP88|A0A2K3MP88_TRIPR (E3 ubiquitin-protein ligase rma1h1-like protein OS=Trifolium pratense OX=57577 GN=L195_g015758 PE=4 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 1.054e-96
Identity = 145/206 (70.39%), Postives = 161/206 (78.16%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTTTD----SDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMD-------VPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTSYYSSPM------SLDNSFGIFGEMIYARVFGNQMENMYAYR 189
            MA+DQYM N  SQ DSFED PS K  KT+TD    SDRN+S GFDCNICL+CVQDPVVTFCGHLYCWPCIYKW+ +Q+SI+S N+EKQKPQCPVCKSELSQSSLVPLYGRGQSTT SE +         VP+RP GPRSYN  TVSQPTYQSY+HP+QFNSIP S Y SPM      +LDN++GIFGEMIYARVFG Q    Y  R
Sbjct:    1 MAMDQYMNNAASQIDSFEDKPSLKTWKTSTDVISDSDRNSSGGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLQVQSSITSENEEKQKPQCPVCKSELSQSSLVPLYGRGQSTTTSEGKTQTHQVGIVVPRRPTGPRSYNAATVSQPTYQSYHHPQQFNSIPNS-YPSPMFSTSGSALDNTYGIFGEMIYARVFGQQTYGPYNGR 205
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P4BW96|A0A6P4BW96_ARADU (E3 ubiquitin-protein ligase RMA1H1 OS=Arachis duranensis OX=130453 GN=LOC107462166 PE=4 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 7.679e-96
Identity = 154/250 (61.60%), Postives = 183/250 (73.20%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKI------SKTTTDSDRNASAG-FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSE-----ARMDVPQRPLGPRSYNTTTVSQPT---YQSYYH--PRQFNSIPTSYYSSPM--SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            M L QY E  + Q D FEDN S ++      S    DSD NAS G F+CNICLECVQDPVVT CGHLYCWPCIYKW++ + +ISS   EK+KPQCPVCKSE+SQSSLVPLYGRGQ+++ SE     A + +P+RPLGP S +T  VSQPT   Y S+Y    +QFNSIP SY SSP+  S + ++GI GE IYARVFGNQ+ N+Y Y NSY   GNNNPR+RR+LM+ D+SLSRI FFL CC VLCLLLF
Sbjct:    1 MDLHQYFEGGMPQMDYFEDNSSLEMWKCASDSDAIADSDGNASGGGFECNICLECVQDPVVTLCGHLYCWPCIYKWLNFR-NISSEIGEKRKPQCPVCKSEISQSSLVPLYGRGQASSASEDKAHQAGVVIPRRPLGPGSSSTANVSQPTSRVYHSHYPDPSQQFNSIPGSY-SSPLTNSFNTTYGIIGETIYARVFGNQVTNIYTYPNSYHLAGNNNPRIRRYLMEADRSLSRICFFLFCCTVLCLLLF 248
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A444Y6B6|A0A444Y6B6_ARAHY (RING-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g093512 PE=4 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.126e-95
Identity = 153/250 (61.20%), Postives = 183/250 (73.20%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKI------SKTTTDSDRNASAG-FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSE-----ARMDVPQRPLGPRSYNTTTVSQPT---YQSYYH--PRQFNSIPTSYYSSPM--SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            M L QY E  + Q D FEDN S ++      S    DSD NAS G F+CNICLECVQDPVVT CGHLYCWPCIYKW++ + +ISS   EK+KPQCPVCKSE+SQSSLVPLYGRGQ+++ SE     A + +P+RPLGP S +T  VSQP+   Y S+Y    +QFNSIP SY SSP+  S + ++GI GE IYARVFGNQ+ N+Y Y NSY   GNNNPR+RR+LM+ D+SLSRI FFL CC VLCLLLF
Sbjct:    1 MDLHQYFEGGMPQMDYFEDNSSLEMWKCASDSDAIADSDGNASGGGFECNICLECVQDPVVTLCGHLYCWPCIYKWLNFR-NISSETGEKRKPQCPVCKSEISQSSLVPLYGRGQASSASEDKAHQAGVVIPRRPLGPGSSSTANVSQPSSRVYHSHYPDPSQQFNSIPGSY-SSPLTNSFNTTYGIIGETIYARVFGNQVTNIYTYPNSYHLAGNNNPRIRRYLMEADRSLSRICFFLFCCTVLCLLLF 248
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|V7AHF5|V7AHF5_PHAVU (RING-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G114400g PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 1.322e-92
Identity = 143/233 (61.37%), Postives = 173/233 (74.25%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMD-----VPQRPLGPRSYNTTTVSQPTYQSYYHP-------RQFNSIPTSYYSSPM-----SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRI 216
            MALD  +E TV QN+ ++ +     ++   DSD NAS+GFDCNICLECVQDPVVT CGHLYCWPCIYKW+H     S  ++E+Q PQCPVCK+E+SQSSLVPLYGRG +T  S+ +       +PQRP GPRS NT++VSQP  QSY+HP       +QFNS+P+  Y+SPM     SLDNSFGIFGEMIYARVFGNQ+ NM+ Y NSY+  G +NPR+RRHLM VDKSLSRI
Sbjct:    1 MALDN-LEETVPQNEKWKSS-----NEVIADSDINASSGFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHYFQRTSIDSEEQQNPQCPVCKAEVSQSSLVPLYGRGLTTRPSKGKAHQVGTVIPQRPYGPRSLNTSSVSQPISQSYHHPYSNPYYTQQFNSVPSG-YTSPMLRTSGSLDNSFGIFGEMIYARVFGNQVTNMHPYANSYNLSGISNPRMRRHLMHVDKSLSRI 226
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445BX93|A0A445BX93_ARAHY (RING-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g039783 PE=4 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.189e-90
Identity = 147/242 (60.74%), Postives = 176/242 (72.73%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKI------SKTTTDSDRNASAG-FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSE-----ARMDVPQRPLGPRSYNTTTVSQPT---YQSYYH--PRQFNSIPTSYYSSPM--SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCC 223
            M L QY E  + Q D FEDN S ++      S    DSD NAS G F+CNICLECVQDPVVT CGHLYCWPCIYKW++ + +ISS   EK+KPQCPVCKSE+SQSSLVPLYGRGQ+++ SE     A + +P+RPLGP S +T  VSQPT   Y S+Y    +QFNSIP SY SSP+  S + ++GI GE IYARVFGNQ+ N+Y Y NSY   GNNNPR+RR+LM+ D+SLSRI FFL CC
Sbjct:   76 MDLHQYFEGGMPQMDYFEDNSSLEMWKCASDSDAIADSDGNASGGGFECNICLECVQDPVVTLCGHLYCWPCIYKWLNFR-NISSEIGEKRKPQCPVCKSEISQSSLVPLYGRGQASSASEDKAHQAGVVIPRRPLGPGSSSTANVSQPTSRVYHSHYPDPSQQFNSIPGSY-SSPLTNSFNTTYGIIGETIYARVFGNQVTNIYTYPNSYHLAGNNNPRIRRYLMEADRSLSRICFFLFCC 315
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2RSD4|A0A0B2RSD4_GLYSO (E3 ubiquitin-protein ligase RMA1H1 OS=Glycine soja OX=3848 GN=glysoja_042328 PE=4 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.770e-90
Identity = 151/241 (62.66%), Postives = 180/241 (74.69%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEAR-----MDVPQRPLGPRSYNTTTVSQPTYQSY------YHPRQ-FNSIPTSYYSSPM-----SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCL 224
            MALD + E TV Q  +++ +     S+   DSDRNAS  FDCNICLECVQDPVVT CGHLYCWPCIYKW+H Q S S  ++E+Q+PQCPVCKSE+SQSSLVPLYGRGQ+T  S+ +       +PQRP GPR+ NT +VSQP  QSY      YHP+Q FNSIP+ Y +SPM     S+DN+FGIFGEMIYARVFGN + N++ Y NSY+  G +NPR+RRHLMQVDKSLSRI  FLLCCL
Sbjct:    1 MALDHF-EETVHQKGNWKSS-----SEIIADSDRNASGDFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQ-STSLDDEEQQRPQCPVCKSEVSQSSLVPLYGRGQTTLPSKGKPRQVGTVIPQRPHGPRTLNTRSVSQPISQSYHPYSNPYHPQQHFNSIPSGY-TSPMIRTTGSIDNTFGIFGEMIYARVFGNHVSNIHTYANSYNLSGTSNPRMRRHLMQVDKSLSRISCFLLCCL 233
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Match: tr|C6T8R2|C6T8R2_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100786373 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.770e-90
Identity = 151/241 (62.66%), Postives = 180/241 (74.69%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEAR-----MDVPQRPLGPRSYNTTTVSQPTYQSY------YHPRQ-FNSIPTSYYSSPM-----SLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCL 224
            MALD + E TV Q  +++ +     S+   DSDRNAS  FDCNICLECVQDPVVT CGHLYCWPCIYKW+H Q S S  ++E+Q+PQCPVCKSE+SQSSLVPLYGRGQ+T  S+ +       +PQRP GPR+ NT +VSQP  QSY      YHP+Q FNSIP+ Y +SPM     S+DN+FGIFGEMIYARVFGN + N++ Y NSY+  G +NPR+RRHLMQVDKSLSRI  FLLCCL
Sbjct:    1 MALDHF-EETVHQKGNWKSS-----SEIIADSDRNASGDFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQ-STSLDDEEQQRPQCPVCKSEVSQSSLVPLYGRGQTTLPSKGKPRQVGTVIPQRPHGPRTLNTRSVSQPISQSYHPYSNPYHPQQHFNSIPSGY-TSPMIRTTGSIDNTFGIFGEMIYARVFGNHVSNIHTYANSYNLSGTSNPRMRRHLMQVDKSLSRISCFLLCCL 233
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6R567|RMA1_CAPAN (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.418e-67
Identity = 119/255 (46.67%), Postives = 156/255 (61.18%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNPSFKISKTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGR-GQSTTKSEAR-----MDVPQRPLGPRSYN----TTTVSQPT-------YQSYYHPRQFNSIPTSYYSSPMSLDNS-------FGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            MAL+Q ++ T +++D+    P  K      + + N S GFDCNICL+CV +PV+T CGHLYCWPCIYKWI+ Q S+SS N ++Q+PQCPVCK+E+S+ +L+PLYGR GQST  SE +     + +PQRP  PR        TT S P+       YQ     RQ  +   SY SSPM              + GE+ YAR+FGN    MY Y NSY+   +++PR+RR L Q D+SL RI FFL CC V CL+LF
Sbjct:    5 MALEQ-LDTTFNKHDT----PLGKWKSMNDEVEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQ-SVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQ-PAYQGSYMSSPMLSPGGATANMLQHSMIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLILF 252
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|O64425|RMA1_ARATH (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.394e-65
Identity = 111/251 (44.22%), Postives = 153/251 (60.96%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNP-SFKISK-----TTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQ---FNSIPTSYY--SSPMS---------LDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            MALDQ  E+     + + +    FK  K      +  SD    + FDCNICL+ VQ+PVVT CGHL+CWPCI+KW+ +Q S S+ ++ ++  QCPVCKS++S S+LVPLYGRG+ TT+ E +  VP+RP+GP  Y     + P   +     Q   FNS    YY  S  MS         LD    + GEM+  R+FG ++ + +AY ++Y+  G + PR+RR +MQ DKSL RIFFF +CC+VLCLLLF
Sbjct:    1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQ-SFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNSVPKRPVGP-VYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|P93030|RMA2_ARATH (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 3.590e-48
Identity = 87/214 (40.65%), Postives = 123/214 (57.48%), Query Frame = 0 
Query:   23 FKISKTTTDSDRNASAG-FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHM----QTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTSYYSSPMSLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
             +I K   D+    S G FDCNICL+ V+DPVVT CGHL+CWPCI+KW +     +  +   + +++ P+CPVCKS++S+++LVP+YGRGQ   +S +  +VP RP GP  Y+   V Q   +     R    +P          D   G+  EM+Y R+FG    NM  YR+        N R RR  MQ ++SLSR++ FLLC + +CL LF
Sbjct:    1 MEIEKDEDDTTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIYGRGQKAPQSGS--NVPSRPTGP-VYDLRGVGQRLGEGESQ-RYMYRMP----------DPVMGVVCEMVYRRLFGESSSNMAPYRDM-------NVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GUK7|RMA3_ARATH (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.603e-36
Identity = 74/216 (34.26%), Postives = 116/216 (53.70%), Query Frame = 0 
Query:   25 ISKTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKS--------EARMDVPQRPLGPRSYNTTTVS------------QPTYQSY-YHPRQFNSIPTSYYSSPMSLD---NSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRI 216
            ++   T    N S  FDCNICL+   DPVVT CGHL+CWPCIYKW+H+Q  +SS + ++ +  CPVCKS ++ +SLVPLYGRG S+  S            D+P+RP      N  T +             P++ ++ Y PR F +  ++  ++ + +       G+FG+++Y R+FG        + N+ +      P   + +MQ +KSL+R+
Sbjct:   27 LTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQ--LSSVSVDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFG-------TFTNTIA-----QPYQSQRMMQREKSLNRV 228
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q5M807|RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus OX=10116 GN=Rnf5 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.523e-22
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 
Query:   35 NASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPR 127
             ASA F+CNICLE  ++ VV+ CGHLYCWPC+++W+  +           + +CPVCK+ +S+  +VPLYGRG S    + R+  P RP G R
Sbjct:   20 GASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPD---------RQECPVCKAGISREKVVPLYGRG-SQKPQDPRLKTPPRPQGQR 102
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|O35445|RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus OX=10090 GN=Rnf5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.523e-22
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 
Query:   35 NASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPR 127
             ASA F+CNICLE  ++ VV+ CGHLYCWPC+++W+  +           + +CPVCK+ +S+  +VPLYGRG S    + R+  P RP G R
Sbjct:   20 GASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPD---------RQECPVCKAGISREKVVPLYGRG-SQKPQDPRLKTPPRPQGQR 102
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q99942|RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.711e-22
Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = 0 
Query:   35 NASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPR 127
             A A F+CNICLE  ++ VV+ CGHLYCWPC+++W+  +        E+Q  +CPVCK+ +S+  +VPLYGRG S    + R+  P RP G R
Sbjct:   20 GAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQ--ECPVCKAGISREKVVPLYGRG-SQKPQDPRLKTPPRPQGQR 102
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q09463|RNF5_CAEEL (E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.739e-22
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0 
Query:   27 KTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRS 128
            + T+ S+++ SA F+CNICL+  +D VV+ CGHL+CWPC+ +W+  + +    NQ      CPVCKS +  + +VP+YGRG  +  S+ R  VP RP G RS
Sbjct:   11 EPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPN----NQ-----VCPVCKSAIDGNKVVPIYGRGGDS--SDPRKKVPPRPKGQRS 101
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q91YT2|RN185_MOUSE (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.443e-21
Identity = 42/118 (35.59%), Postives = 69/118 (58.47%), Query Frame = 0 
Query:   10 TVSQNDSFEDNPSFKISKTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPR 127
            + S  +S    PS   + T     ++++  F+CNICL+  +D V++ CGHL+CWPC+++W+  + +         +  CPVCK+ +S+  ++PLYGRG ST + + R   P RP G R
Sbjct:    9 SASTENSNAGGPSGSSNGTGESGGQDST--FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN---------RQVCPVCKAGISRDKVIPLYGRG-STGQQDPREKTPPRPQGQR 114
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q568Y3|RN185_RAT (E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus OX=10116 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.272e-20
Identity = 37/88 (42.05%), Postives = 57/88 (64.77%), Query Frame = 0 
Query:   40 FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPR 127
            F+CNICL+  +D V++ CGHL+CWPC+++W+  + +         +  CPVCK+ +S+  ++PLYGRG ST + + R   P RP G R
Sbjct:   37 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPN---------RQVCPVCKAGISRDKVIPLYGRG-STGQQDPREKTPPRPQGQR 114
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT4G03510.4 (| RING membrane-anchor 1 | Chr4:1557905-1558654 REVERSE LENGTH=249 | 201606)

HSP 1 Score: 205.682 bits (522), Expect = 2.449e-66
Identity = 111/251 (44.22%), Postives = 153/251 (60.96%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNP-SFKISK-----TTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQ---FNSIPTSYY--SSPMS---------LDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            MALDQ  E+     + + +    FK  K      +  SD    + FDCNICL+ VQ+PVVT CGHL+CWPCI+KW+ +Q S S+ ++ ++  QCPVCKS++S S+LVPLYGRG+ TT+ E +  VP+RP+GP  Y     + P   +     Q   FNS    YY  S  MS         LD    + GEM+  R+FG ++ + +AY ++Y+  G + PR+RR +MQ DKSL RIFFF +CC+VLCLLLF
Sbjct:    1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQ-SFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNSVPKRPVGP-VYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT4G03510.3 (| RING membrane-anchor 1 | Chr4:1557905-1558654 REVERSE LENGTH=249 | 201606)

HSP 1 Score: 205.682 bits (522), Expect = 2.449e-66
Identity = 111/251 (44.22%), Postives = 153/251 (60.96%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNP-SFKISK-----TTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQ---FNSIPTSYY--SSPMS---------LDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            MALDQ  E+     + + +    FK  K      +  SD    + FDCNICL+ VQ+PVVT CGHL+CWPCI+KW+ +Q S S+ ++ ++  QCPVCKS++S S+LVPLYGRG+ TT+ E +  VP+RP+GP  Y     + P   +     Q   FNS    YY  S  MS         LD    + GEM+  R+FG ++ + +AY ++Y+  G + PR+RR +MQ DKSL RIFFF +CC+VLCLLLF
Sbjct:    1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQ-SFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNSVPKRPVGP-VYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT4G03510.2 (| RING membrane-anchor 1 | Chr4:1557905-1558654 REVERSE LENGTH=249 | 201606)

HSP 1 Score: 205.682 bits (522), Expect = 2.449e-66
Identity = 111/251 (44.22%), Postives = 153/251 (60.96%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNP-SFKISK-----TTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQ---FNSIPTSYY--SSPMS---------LDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            MALDQ  E+     + + +    FK  K      +  SD    + FDCNICL+ VQ+PVVT CGHL+CWPCI+KW+ +Q S S+ ++ ++  QCPVCKS++S S+LVPLYGRG+ TT+ E +  VP+RP+GP  Y     + P   +     Q   FNS    YY  S  MS         LD    + GEM+  R+FG ++ + +AY ++Y+  G + PR+RR +MQ DKSL RIFFF +CC+VLCLLLF
Sbjct:    1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQ-SFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNSVPKRPVGP-VYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT4G03510.1 (| RING membrane-anchor 1 | Chr4:1557905-1558654 REVERSE LENGTH=249 | 201606)

HSP 1 Score: 205.682 bits (522), Expect = 2.449e-66
Identity = 111/251 (44.22%), Postives = 153/251 (60.96%), Query Frame = 0 
Query:    1 MALDQYMENTVSQNDSFEDNP-SFKISK-----TTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQ---FNSIPTSYY--SSPMS---------LDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
            MALDQ  E+     + + +    FK  K      +  SD    + FDCNICL+ VQ+PVVT CGHL+CWPCI+KW+ +Q S S+ ++ ++  QCPVCKS++S S+LVPLYGRG+ TT+ E +  VP+RP+GP  Y     + P   +     Q   FNS    YY  S  MS         LD    + GEM+  R+FG ++ + +AY ++Y+  G + PR+RR +MQ DKSL RIFFF +CC+VLCLLLF
Sbjct:    1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQ-SFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNSVPKRPVGP-VYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT4G28270.1 (| RING membrane-anchor 2 | Chr4:14007614-14008195 REVERSE LENGTH=193 | 201606)

HSP 1 Score: 160.229 bits (404), Expect = 3.673e-49
Identity = 87/214 (40.65%), Postives = 123/214 (57.48%), Query Frame = 0 
Query:   23 FKISKTTTDSDRNASAG-FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHM----QTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTSYYSSPMSLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF 231
             +I K   D+    S G FDCNICL+ V+DPVVT CGHL+CWPCI+KW +     +  +   + +++ P+CPVCKS++S+++LVP+YGRGQ   +S +  +VP RP GP  Y+   V Q   +     R    +P          D   G+  EM+Y R+FG    NM  YR+        N R RR  MQ ++SLSR++ FLLC + +CL LF
Sbjct:    1 MEIEKDEDDTTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIYGRGQKAPQSGS--NVPSRPTGP-VYDLRGVGQRLGEGESQ-RYMYRMP----------DPVMGVVCEMVYRRLFGESSSNMAPYRDM-------NVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT4G27470.1 (| RING membrane-anchor 3 | Chr4:13735576-13736307 FORWARD LENGTH=243 | 201606)

HSP 1 Score: 130.954 bits (328), Expect = 3.686e-37
Identity = 74/216 (34.26%), Postives = 116/216 (53.70%), Query Frame = 0 
Query:   25 ISKTTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKS--------EARMDVPQRPLGPRSYNTTTVS------------QPTYQSY-YHPRQFNSIPTSYYSSPMSLD---NSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNPRVRRHLMQVDKSLSRI 216
            ++   T    N S  FDCNICL+   DPVVT CGHL+CWPCIYKW+H+Q  +SS + ++ +  CPVCKS ++ +SLVPLYGRG S+  S            D+P+RP      N  T +             P++ ++ Y PR F +  ++  ++ + +       G+FG+++Y R+FG        + N+ +      P   + +MQ +KSL+R+
Sbjct:   27 LTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQ--LSSVSVDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFG-------TFTNTIA-----QPYQSQRMMQREKSLNRV 228
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT1G74990.1 (| RING/U-box superfamily protein | Chr1:28159837-28160250 REVERSE LENGTH=137 | 201606)

HSP 1 Score: 107.457 bits (267), Expect = 2.307e-29
Identity = 50/139 (35.97%), Postives = 79/139 (56.83%), Query Frame = 0 
Query:   28 TTTDSDRNASAGFDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEARMD----VPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTSYYSSPMSL 162
            T T+ + +AS  F CNICLE  ++P+VT CGHL+CWPC+YKW+H  +         +   CPVCK+ + + +LVPLYG G+ ++   ++++    VP RP   R    T  ++P  +  +H   F    +S+ + P  L
Sbjct:    5 TITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHS---------KSNHCPVCKALVKEDTLVPLYGMGKPSSDPRSKLNSGVTVPNRPAATR----TETARPRLEQRHHGSSFFGGHSSFAAMPTGL 130
[Close]
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT1G19310.1 (| RING/U-box superfamily protein | Chr1:6676424-6677104 REVERSE LENGTH=226 | 201606)

HSP 1 Score: 107.071 bits (266), Expect = 3.756e-28
Identity = 54/151 (35.76%), Postives = 81/151 (53.64%), Query Frame = 0 
Query:   40 FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQST----TKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNSIPTSYYSSPMSLDNSFGIFGEMIYARVFGNQMENMY 186
            F+CNICL+  QDP+VT CGHL+CWPC+YKW+H+ +         Q   CPVCK+ + +  LVPLYGRG+S+    +KS   ++VP RP G R     T   P     +            +++PM+       FG +  +  FG  + +++
Sbjct:   21 FECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHS---------QSKDCPVCKAVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRPSGQR---PETAQPPDPNHGFAHHHGFGGFMGGFAAPMASAR----FGNVTLSAAFGGLIPSLF 155
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BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT2G23780.3 (| RING/U-box superfamily protein | Chr2:10123551-10124234 REVERSE LENGTH=227 | 201606)

HSP 1 Score: 106.301 bits (264), Expect = 6.393e-28
Identity = 73/224 (32.59%), Postives = 103/224 (45.98%), Query Frame = 0 
Query:   31 DSDRNASAG-FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEAR----MDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQFN-SIPTSYYSSPMSLDNSFG----IFGEMIYA----RVFGNQMENMYAYRNSYSFQGNNN------PRVRRHLM-----QVDKSLSRIFFFLLCCLVLCLL 229
            ++D N   G F+CNIC E  QDP+VT CGHL+CWPC+Y+W+H               +CPVCK+ +    LVPLYGRG++ T   ++    + +P RP G R        QP   S +    FN  I       PM     FG     FG ++ +    +  G     +Y     Y + G +N      PR +   M     Q D  L  I FF+  C+V+ L+
Sbjct:   16 NNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLH---------HHSHSQECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRPTGQRPETAAPPPQPEAASNF----FNYGIGLMGGIMPMMATTRFGNFSMGFGGLLPSLFNFQFHGFHDATLYGSTPGYPYGGYHNGFRGVPPRGQERPMARGGNQSDAFLKNILFFVGICVVIFLI 226
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BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Match: AT2G23780.2 (| RING/U-box superfamily protein | Chr2:10123551-10124234 REVERSE LENGTH=227 | 201606)

HSP 1 Score: 106.301 bits (264), Expect = 6.393e-28
Identity = 73/224 (32.59%), Postives = 103/224 (45.98%), Query Frame = 0 
Query:   31 DSDRNASAG-FDCNICLECVQDPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSLVPLYGRGQSTTKSEAR----MDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQFN-SIPTSYYSSPMSLDNSFG----IFGEMIYA----RVFGNQMENMYAYRNSYSFQGNNN------PRVRRHLM-----QVDKSLSRIFFFLLCCLVLCLL 229
            ++D N   G F+CNIC E  QDP+VT CGHL+CWPC+Y+W+H               +CPVCK+ +    LVPLYGRG++ T   ++    + +P RP G R        QP   S +    FN  I       PM     FG     FG ++ +    +  G     +Y     Y + G +N      PR +   M     Q D  L  I FF+  C+V+ L+
Sbjct:   16 NNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLH---------HHSHSQECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRPTGQRPETAAPPPQPEAASNF----FNYGIGLMGGIMPMMATTRFGNFSMGFGGLLPSLFNFQFHGFHDATLYGSTPGYPYGGYHNGFRGVPPRGQERPMARGGNQSDAFLKNILFFVGICVVIFLI 226
The following BLAST results are available for this feature:
BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A072U1G6|A0A072U1G6_MEDTR4.255e-12573.58E3 ubiquitin-protein ligase RMA1H1-like protein OS... [more]
tr|A0A1S2YLD9|A0A1S2YLD9_CICAR1.634e-10969.87E3 ubiquitin-protein ligase RMA1H1-like OS=Cicer a... [more]
tr|A0A2Z6MR71|A0A2Z6MR71_TRISU1.060e-10370.98RING-type domain-containing protein OS=Trifolium s... [more]
tr|A0A2K3MP88|A0A2K3MP88_TRIPR1.054e-9670.39E3 ubiquitin-protein ligase rma1h1-like protein OS... [more]
tr|A0A6P4BW96|A0A6P4BW96_ARADU7.679e-9661.60E3 ubiquitin-protein ligase RMA1H1 OS=Arachis dura... [more]
tr|A0A444Y6B6|A0A444Y6B6_ARAHY1.126e-9561.20RING-type domain-containing protein OS=Arachis hyp... [more]
tr|V7AHF5|V7AHF5_PHAVU1.322e-9261.37RING-type domain-containing protein OS=Phaseolus v... [more]
tr|A0A445BX93|A0A445BX93_ARAHY2.189e-9060.74RING-type domain-containing protein OS=Arachis hyp... [more]
tr|A0A0B2RSD4|A0A0B2RSD4_GLYSO2.770e-9062.66E3 ubiquitin-protein ligase RMA1H1 OS=Glycine soja... [more]
tr|C6T8R2|C6T8R2_SOYBN2.770e-9062.66RING-type domain-containing protein OS=Glycine max... [more]
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BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q6R567|RMA1_CAPAN1.418e-6746.67E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum ann... [more]
sp|O64425|RMA1_ARATH2.394e-6544.22E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis th... [more]
sp|P93030|RMA2_ARATH3.590e-4840.65E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis th... [more]
sp|Q8GUK7|RMA3_ARATH3.603e-3634.26E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis th... [more]
sp|Q5M807|RNF5_RAT1.523e-2245.16E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegi... [more]
sp|O35445|RNF5_MOUSE1.523e-2245.16E3 ubiquitin-protein ligase RNF5 OS=Mus musculus O... [more]
sp|Q99942|RNF5_HUMAN1.711e-2246.24E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens O... [more]
sp|Q09463|RNF5_CAEEL1.739e-2244.12E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegan... [more]
sp|Q91YT2|RN185_MOUSE4.443e-2135.59E3 ubiquitin-protein ligase RNF185 OS=Mus musculus... [more]
sp|Q568Y3|RN185_RAT3.272e-2042.05E3 ubiquitin-protein ligase RNF185 OS=Rattus norve... [more]
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BLAST of Vfaba.Tiffany.R1.6g004520.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT4G03510.42.449e-6644.22| RING membrane-anchor 1 | Chr4:1557905-1558654 RE... [more]
AT4G03510.32.449e-6644.22| RING membrane-anchor 1 | Chr4:1557905-1558654 RE... [more]
AT4G03510.22.449e-6644.22| RING membrane-anchor 1 | Chr4:1557905-1558654 RE... [more]
AT4G03510.12.449e-6644.22| RING membrane-anchor 1 | Chr4:1557905-1558654 RE... [more]
AT4G28270.13.673e-4940.65| RING membrane-anchor 2 | Chr4:14007614-14008195 ... [more]
AT4G27470.13.686e-3734.26| RING membrane-anchor 3 | Chr4:13735576-13736307 ... [more]
AT1G74990.12.307e-2935.97| RING/U-box superfamily protein | Chr1:28159837-2... [more]
AT1G19310.13.756e-2835.76| RING/U-box superfamily protein | Chr1:6676424-66... [more]
AT2G23780.36.393e-2832.59| RING/U-box superfamily protein | Chr2:10123551-1... [more]
AT2G23780.26.393e-2832.59| RING/U-box superfamily protein | Chr2:10123551-1... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 16..122
e-value: 3.9E-17
score: 64.1
IPR027370Zinc finger, RING-type, eukaryoticPFAMPF13445zf-RING_UBOXcoord: 42..73
e-value: 8.7E-7
score: 28.9
IPR045103E3 ubiquitin-protein ligase RNF5/RNF185-likePANTHERPTHR12313E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATEDcoord: 13..228
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 42..92
score: 12.651561
NoneNo IPR availableCDDcd16745RING-HC_AtRMA-likecoord: 40..93
e-value: 4.91826E-26
score: 93.7026
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 39..104

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Tiffany.R1.6g004520.1_tif_v1 ID=Vfaba.Tiffany.R1.6g004520.1_tif_v1; Name=Vfaba.Tiffany.R1.6g004520.1; organism=Vicia faba; type=mRNA; length=696bp
ATGGCGTTAGATCAATACATGGAGAACACCGTCTCCCAAAATGATTCCTT
TGAAGATAATCCATCTTTCAAAATCTCAAAAACCACCACAGATTCTGATA
GAAATGCATCTGCTGGCTTTGACTGCAACATCTGCTTAGAGTGTGTGCAA
GATCCAGTAGTCACGTTTTGTGGTCACCTTTACTGCTGGCCTTGCATTTA
CAAATGGATTCATATGCAAACTAGTATATCTTCTGGAAACCAGGAGAAGC
AGAAGCCACAATGTCCAGTATGCAAATCAGAACTCTCTCAATCCTCACTA
GTTCCATTATACGGCCGTGGCCAATCCACCACAAAGTCTGAAGCTCGGAT
GGATGTACCTCAAAGACCTTTGGGTCCCAGATCATATAATACTACAACTG
TTTCACAACCTACTTATCAAAGTTATTATCATCCTCGACAGTTCAACTCA
ATTCCTACCAGTTACTACTCTTCACCCATGTCATTGGACAACTCATTTGG
AATCTTCGGTGAAATGATATACGCGAGGGTGTTCGGTAACCAGATGGAAA
ACATGTATGCATATCGTAATTCATATAGTTTTCAAGGAAACAATAATCCA
AGGGTTAGAAGACATTTAATGCAAGTTGATAAATCACTAAGCAGAATCTT
TTTTTTCCTCCTTTGCTGCTTAGTTTTGTGTCTTCTCTTATTTTGA
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protein sequence of Vfaba.Tiffany.R1.6g004520.1_tif_v1

>Vfaba.Tiffany.R1.6g004520.1_tif_v1 ID=Vfaba.Tiffany.R1.6g004520.1_tif_v1; Name=Vfaba.Tiffany.R1.6g004520.1_tif_v1; organism=Vicia faba; type=polypeptide; length=231bp
MALDQYMENTVSQNDSFEDNPSFKISKTTTDSDRNASAGFDCNICLECVQ
DPVVTFCGHLYCWPCIYKWIHMQTSISSGNQEKQKPQCPVCKSELSQSSL
VPLYGRGQSTTKSEARMDVPQRPLGPRSYNTTTVSQPTYQSYYHPRQFNS
IPTSYYSSPMSLDNSFGIFGEMIYARVFGNQMENMYAYRNSYSFQGNNNP
RVRRHLMQVDKSLSRIFFFLLCCLVLCLLLF
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mRNA from alignment at chr6:46955749..46956444+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Tiffany.R1.6g004520.1_tif_v1 ID=Vfaba.Tiffany.R1.6g004520.1_tif_v1; Name=Vfaba.Tiffany.R1.6g004520.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr6:46955749..46956444+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_euk
IPR045103RNF5/RNF185-like
IPR001841Znf_RING
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0061630ubiquitin protein ligase activity