Vfaba.Tiffany.R1.6g008480.1

Transcript Overview


Name	Vfaba.Tiffany.R1.6g008480.1
Unique Name	Vfaba.Tiffany.R1.6g008480.1_tif_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	612

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr6	chromosome	chr6:98628823..98630936 -	Vicia faba cv. Tiffany genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba cv. Tiffany genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11	2023-05-10

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
tifzwsR517	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifzwsR537	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
astifL150	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
astifL682	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
catifL071	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL086	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL580	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cctifL0177	Cajanus cajan Asha genome v1.0	Cajanus cajan
crtifL561	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crtifL704	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
tiftifL123	Vicia faba cv. Tiffany genome v1.0	Vicia faba
pvtifL187	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pstifL552	Pisum sativum Cameor genome v1a	Pisum sativum
pvtifL524	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvuR666	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvfhR387	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvfhR418	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvuR725	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caitifL114	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL121	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
antifL0301	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL0590	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL1089	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL1167	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
tifvrvR652	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvrvR676	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvuaR559	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvuaR613	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR676	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
tifvssR711	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cantifL071	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.6g008480	Vfaba.Tiffany.R1.6g008480_tif_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon	Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon-chr6_tif_v1:98628823..98628966	Vicia faba	exon
Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon	Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon-chr6_tif_v1:98629168..98629247	Vicia faba	exon
Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon	Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon-chr6_tif_v1:98629446..98629476	Vicia faba	exon
Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon	Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon-chr6_tif_v1:98630326..98630454	Vicia faba	exon
Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon	Vfaba.Tiffany.R1.6g008480.1_tif_v1-exon-chr6_tif_v1:98630709..98630936	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds	Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds-chr6_tif_v1:98628823..98628966	Vicia faba	CDS
Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds	Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds-chr6_tif_v1:98629168..98629247	Vicia faba	CDS
Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds	Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds-chr6_tif_v1:98629446..98629476	Vicia faba	CDS
Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds	Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds-chr6_tif_v1:98630326..98630454	Vicia faba	CDS
Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds	Vfaba.Tiffany.R1.6g008480.1_tif_v1-cds-chr6_tif_v1:98630709..98630936	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.6g008480.1_tif_v1	Vfaba.Tiffany.R1.6g008480.1_tif_v1	Vicia faba	polypeptide
Vfaba.Tiffany.R1.6g008480.1_tif_v1	Vfaba.Tiffany.R1.6g008480.1_tif_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NB11|A0A2Z6NB11_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_206240 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.833e-16
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            SAPVNIIVGSHVWVEDP LAWIGGEVTKI+GE VHVRT DGKT
Sbjct:   11 SAPVNIIVGSHVWVEDPALAWIGGEVTKINGEEVHVRTGDGKT 53

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072US24|A0A072US24_MEDTR (DIL domain myosin family protein OS=Medicago truncatula OX=3880 GN=25494196 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.756e-15
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            SAPVNIIVGSHVWVEDP LAWIGGEVTKI+G  VHVRT DGKT
Sbjct:    2 SAPVNIIVGSHVWVEDPALAWIGGEVTKINGGEVHVRTGDGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YPL8|A0A1S2YPL8_CICAR (myosin-17 OS=Cicer arietinum OX=3827 GN=LOC101503438 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.088e-15
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            SAPVNIIVGSHVWVEDP  AWIGGEVTKI+GE +HVRT DGKT
Sbjct:    2 SAPVNIIVGSHVWVEDPAQAWIGGEVTKINGEQLHVRTGDGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PER2|A0A2K3PER2_TRIPR (Unconventional myosin-Va-like protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g010456 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.149e-15
Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            SAPVNIIVGSHVWVEDP LAWIGGEVTKI+GE VHVR  DGKT
Sbjct:    1 SAPVNIIVGSHVWVEDPGLAWIGGEVTKINGEEVHVRIGDGKT 43

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A7J8QPF5|A0A7J8QPF5_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=Gorai_003542 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.258e-14
Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            +APVNIIVGSHVWVEDPTLAWI GEV KISGE+VHV+T +GKT
Sbjct:    1 AAPVNIIVGSHVWVEDPTLAWIDGEVFKISGEDVHVQTTNGKT 43

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371E3E6|A0A371E3E6_MUCPR (Myosin-17 OS=Mucuna pruriens OX=157652 GN=XI-K PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.828e-14
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 0

Query:   75 STSAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            ++SAPVNIIVGSHVW+EDPT AWI GEV+KI+GE VHVRT +GKT
Sbjct:   17 NSSAPVNIIVGSHVWIEDPTQAWIDGEVSKINGEEVHVRTTNGKT 61

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2P5WVU1|A0A2P5WVU1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA25446 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.484e-14
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0

Query:   71 TNMRSTSAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            T++   +APVNIIVGSHVWVEDPTLAWI GEV KISGE VHV+T +GKT
Sbjct:    4 TSIHMQAAPVNIIVGSHVWVEDPTLAWIDGEVFKISGEEVHVQTTNGKT 52

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445HE91|A0A445HE91_GLYSO (Myosin-17 OS=Glycine soja OX=3848 GN=D0Y65_036326 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.641e-14
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            SAPVNIIVGSHVW+EDP  AWI GEV+KI+GE VHVRT DGKT
Sbjct:    2 SAPVNIIVGSHVWIEDPAQAWIDGEVSKINGEEVHVRTTDGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|I1LY26|I1LY26_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100777802 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.641e-14
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            SAPVNIIVGSHVW+EDP  AWI GEV+KI+GE VHVRT DGKT
Sbjct:    2 SAPVNIIVGSHVWIEDPAQAWIDGEVSKINGEEVHVRTTDGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PK10|A0A0B2PK10_GLYSO (Myosin-J heavy chain OS=Glycine soja OX=3848 GN=glysoja_032472 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.644e-14
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            SAPVNIIVGSHVW+EDP  AWI GEV+KI+GE VHVRT DGKT
Sbjct:   17 SAPVNIIVGSHVWIEDPAQAWIDGEVSKINGEEVHVRTTDGKT 59

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q39160|MYO5_ARATH (Myosin-5 OS=Arabidopsis thaliana OX=3702 GN=XI-1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.408e-13
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            +APV IIVGSHVWVEDP LAWI GEVT+I G NVHV+T+ GKT
Sbjct:    2 AAPV-IIVGSHVWVEDPHLAWIDGEVTRIDGINVHVKTKKGKT 43

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4K5J1|MYO17_ARATH (Myosin-17 OS=Arabidopsis thaliana OX=3702 GN=XI-K PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.057e-13
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0

Query:   78 APVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
             PVNIIVGSHVW+EDP  AWI GEV KI+GE VH  T +GKT
Sbjct:    3 GPVNIIVGSHVWIEDPGAAWIDGEVVKINGEEVHAHTTNGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4IRU3|MYO12_ARATH (Myosin-12 OS=Arabidopsis thaliana OX=3702 GN=XI-F PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.316e-11
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0

Query:   79 PVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            PVNI +GSHVWVEDP LAWI GEVT+I G N  + T +GKT
Sbjct:    4 PVNITLGSHVWVEDPELAWISGEVTEIKGTNAKIVTANGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4HWY6|MYO11_ARATH (Myosin-11 OS=Arabidopsis thaliana OX=3702 GN=XI-E PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.984e-11
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0

Query:   73 MRSTSAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGK 118
            MR++  PVNIIVGSHVW+ED  +AWI G V KI+G++V V+  +GK
Sbjct:    1 MRNSGTPVNIIVGSHVWIEDSDVAWIDGLVEKINGQDVEVQATNGK 46

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT1G17580.1 (| myosin 1 | Chr1:6039453-6049309 FORWARD LENGTH=1520 | 201606)

HSP 1 Score: 71.633 bits (174), Expect = 2.464e-14
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0

Query:   77 SAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            +APV IIVGSHVWVEDP LAWI GEVT+I G NVHV+T+ GKT
Sbjct:    2 AAPV-IIVGSHVWVEDPHLAWIDGEVTRIDGINVHVKTKKGKT 43

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT5G20490.1 (| myosin family protein with Dil | Chr5:6927064-6936543 REVERSE LENGTH=1530 | 201606)

HSP 1 Score: 71.2478 bits (173), Expect = 3.127e-14
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0

Query:   78 APVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
             PVNIIVGSHVW+EDP  AWI GEV KI+GE VH  T +GKT
Sbjct:    2 GPVNIIVGSHVWIEDPGAAWIDGEVVKINGEEVHAHTTNGKT 43

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT5G20490.2 (| myosin family protein with Dil | Chr5:6927064-6937380 REVERSE LENGTH=1531 | 201606)

HSP 1 Score: 71.2478 bits (173), Expect = 3.127e-14
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0

Query:   78 APVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
             PVNIIVGSHVW+EDP  AWI GEV KI+GE VH  T +GKT
Sbjct:    3 GPVNIIVGSHVWIEDPGAAWIDGEVVKINGEEVHAHTTNGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT2G31900.4 (| myosin-like protein XIF | Chr2:13560760-13569623 REVERSE LENGTH=1556 | 201606)

HSP 1 Score: 66.2402 bits (160), Expect = 1.347e-12
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0

Query:   79 PVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            PVNI +GSHVWVEDP LAWI GEVT+I G N  + T +GKT
Sbjct:    4 PVNITLGSHVWVEDPELAWISGEVTEIKGTNAKIVTANGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT2G31900.1 (| myosin-like protein XIF | Chr2:13560760-13569623 REVERSE LENGTH=1556 | 201606)

HSP 1 Score: 66.2402 bits (160), Expect = 1.347e-12
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0

Query:   79 PVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            PVNI +GSHVWVEDP LAWI GEVT+I G N  + T +GKT
Sbjct:    4 PVNITLGSHVWVEDPELAWISGEVTEIKGTNAKIVTANGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT2G31900.2 (| myosin-like protein XIF | Chr2:13560760-13569623 REVERSE LENGTH=1557 | 201606)

HSP 1 Score: 66.2402 bits (160), Expect = 1.347e-12
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0

Query:   79 PVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGKT 119
            PVNI +GSHVWVEDP LAWI GEVT+I G N  + T +GKT
Sbjct:    4 PVNITLGSHVWVEDPELAWISGEVTEIKGTNAKIVTANGKT 44

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT1G54560.1 (| Myosin family protein with Dil domain-containing protein | Chr1:20371649-20379745 REVERSE LENGTH=1529 | 201606)

HSP 1 Score: 65.0846 bits (157), Expect = 4.076e-12
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0

Query:   73 MRSTSAPVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGK 118
            MR++  PVNIIVGSHVW+ED  +AWI G V KI+G++V V+  +GK
Sbjct:    1 MRNSGTPVNIIVGSHVWIEDSDVAWIDGLVEKINGQDVEVQATNGK 46

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT1G08730.2 (| Myosin family protein with Dil domain-containing protein | Chr1:2779963-2788325 FORWARD LENGTH=1530 | 201606)

HSP 1 Score: 61.2326 bits (147), Expect = 6.832e-11
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:   79 PVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGK 118
            PVNIIVGSHVW EDP +AWI GEV KI+G+ V ++   GK
Sbjct:    4 PVNIIVGSHVWFEDPEVAWIDGEVEKINGQEVVIQATTGK 43

[Close]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Match: AT1G54560.2 (| Myosin family protein with Dil domain-containing protein | Chr1:20371649-20379871 REVERSE LENGTH=1526 | 201606)

HSP 1 Score: 59.6918 bits (143), Expect = 2.513e-10
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0

Query:   79 PVNIIVGSHVWVEDPTLAWIGGEVTKISGENVHVRTRDGK 118
            PVNIIVGSHVW+ED  +AWI G V KI+G++V V+  +GK
Sbjct:    4 PVNIIVGSHVWIEDSDVAWIDGLVEKINGQDVEVQATNGK 43

The following BLAST results are available for this feature:

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A2Z6NB11\|A0A2Z6NB11_TRISU	2.833e-16	90.70	Uncharacterized protein OS=Trifolium subterraneum ...	[more]
tr\|A0A072US24\|A0A072US24_MEDTR	1.756e-15	88.37	DIL domain myosin family protein OS=Medicago trunc...	[more]
tr\|A0A1S2YPL8\|A0A1S2YPL8_CICAR	3.088e-15	86.05	myosin-17 OS=Cicer arietinum OX=3827 GN=LOC1015034...	[more]
tr\|A0A2K3PER2\|A0A2K3PER2_TRIPR	4.149e-15	88.37	Unconventional myosin-Va-like protein (Fragment) O...	[more]
tr\|A0A7J8QPF5\|A0A7J8QPF5_GOSRA	1.258e-14	83.72	Uncharacterized protein (Fragment) OS=Gossypium ra...	[more]
tr\|A0A371E3E6\|A0A371E3E6_MUCPR	1.828e-14	77.78	Myosin-17 OS=Mucuna pruriens OX=157652 GN=XI-K PE=...	[more]
tr\|A0A2P5WVU1\|A0A2P5WVU1_GOSBA	2.484e-14	75.51	Uncharacterized protein OS=Gossypium barbadense OX...	[more]
tr\|A0A445HE91\|A0A445HE91_GLYSO	3.641e-14	81.40	Myosin-17 OS=Glycine soja OX=3848 GN=D0Y65_036326 ...	[more]
tr\|I1LY26\|I1LY26_SOYBN	3.641e-14	81.40	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A0B2PK10\|A0A0B2PK10_GLYSO	3.644e-14	81.40	Myosin-J heavy chain OS=Glycine soja OX=3848 GN=gl...	[more]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
sp\|Q39160\|MYO5_ARATH	2.408e-13	76.74	Myosin-5 OS=Arabidopsis thaliana OX=3702 GN=XI-1 P...	[more]
sp\|F4K5J1\|MYO17_ARATH	3.057e-13	71.43	Myosin-17 OS=Arabidopsis thaliana OX=3702 GN=XI-K ...	[more]
sp\|F4IRU3\|MYO12_ARATH	1.316e-11	68.29	Myosin-12 OS=Arabidopsis thaliana OX=3702 GN=XI-F ...	[more]
sp\|F4HWY6\|MYO11_ARATH	3.984e-11	58.70	Myosin-11 OS=Arabidopsis thaliana OX=3702 GN=XI-E ...	[more]

BLAST of Vfaba.Tiffany.R1.6g008480.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 9


Match Name	E-value	Identity	Description
AT1G17580.1	2.464e-14	76.74	\| myosin 1 \| Chr1:6039453-6049309 FORWARD LENGTH=1...	[more]
AT5G20490.1	3.127e-14	71.43	\| myosin family protein with Dil \| Chr5:6927064-69...	[more]
AT5G20490.2	3.127e-14	71.43	\| myosin family protein with Dil \| Chr5:6927064-69...	[more]
AT2G31900.4	1.347e-12	68.29	\| myosin-like protein XIF \| Chr2:13560760-13569623...	[more]
AT2G31900.1	1.347e-12	68.29	\| myosin-like protein XIF \| Chr2:13560760-13569623...	[more]
AT2G31900.2	1.347e-12	68.29	\| myosin-like protein XIF \| Chr2:13560760-13569623...	[more]
AT1G54560.1	4.076e-12	58.70	\| Myosin family protein with Dil domain-containing...	[more]
AT1G08730.2	6.832e-11	65.00	\| Myosin family protein with Dil domain-containing...	[more]
AT1G54560.2	2.513e-10	62.50	\| Myosin family protein with Dil domain-containing...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004009	Myosin, N-terminal, SH3-like	PFAM	PF02736	Myosin_N	coord: 84..119 e-value: 2.1E-11 score: 43.4
IPR004009	Myosin, N-terminal, SH3-like	PROSITE	PS51844	SH3_LIKE	coord: 83..132 score: 14.114052
None	No IPR available	SUPERFAMILY	50084	Myosin S1 fragment, N-terminal domain	coord: 87..121

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:98628823..98630936-

mRNA sequence

>Vfaba.Tiffany.R1.6g008480.1_tif_v1 ID=Vfaba.Tiffany.R1.6g008480.1_tif_v1; Name=Vfaba.Tiffany.R1.6g008480.1; organism=Vicia faba; type=mRNA; length=612bp
ATGCATGTGCTCTCTCCCTCTATGTGGCGCTCTTTCTCTTGCCAACCACC
ATCTGTTCCGAATTCTTCCATTGTATCTCTTCAGCCCAGCATTAAAAATT
TGTTGTTCTGGTTGTTCTTTTGGCATAAACAGAAGGCACCTAACCAATTT
AATATGGAACTTTGTTGTTCTGGTTGTTCTTTTGGCATAAACATAGCCAA
AATTCAATGGACAAACATGAGGAGTACTTCTGCACCAGTGAACATTATTG
TTGGTTCTCATGTCTGGGTTGAAGATCCAACACTAGCATGGATTGGTGGT
GAAGTTACTAAAATCAGTGGTGAGAACGTCCATGTTCGCACCAGAGATGG
GAAAACTGATTTGATCGAGAGTTTTGGATTCTTTGCAGAATTACTTAGAC
TGCATGCAACTGCCAGACTCTATCTGGTGGCGTATTCAAGCTGCAATGCC
TGTGCTCTCTCCCTCTCTGATGGCGCTGGATCTTTCCCTTCTGCAAGCAA
TATTGGAGGTAGCGACTGTGTTAATATTCGTGCTTCCAGCTTGCTTAAAG
GGGCTGTAAGGGTGAGAAGGACTGACCTTACCTATGTCGGTGTTGTGGCT
GAGGATAGTTGA

protein sequence of Vfaba.Tiffany.R1.6g008480.1_tif_v1

>Vfaba.Tiffany.R1.6g008480.1_tif_v1 ID=Vfaba.Tiffany.R1.6g008480.1_tif_v1; Name=Vfaba.Tiffany.R1.6g008480.1_tif_v1; organism=Vicia faba; type=polypeptide; length=203bp
MHVLSPSMWRSFSCQPPSVPNSSIVSLQPSIKNLLFWLFFWHKQKAPNQF
NMELCCSGCSFGINIAKIQWTNMRSTSAPVNIIVGSHVWVEDPTLAWIGG
EVTKISGENVHVRTRDGKTDLIESFGFFAELLRLHATARLYLVAYSSCNA
CALSLSDGAGSFPSASNIGGSDCVNIRASSLLKGAVRVRRTDLTYVGVVA
EDS

mRNA from alignment at chr6:98628823..98630936-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Tiffany.R1.6g008480.1_tif_v1 ID=Vfaba.Tiffany.R1.6g008480.1_tif_v1; Name=Vfaba.Tiffany.R1.6g008480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr6:98628823..98630936- (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004009	Myosin_N

Vocabulary: **Cellular Component**
Term	Definition
GO:0016459	myosin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003774	cytoskeletal motor activity

Search form

Vfaba.Tiffany.R1.6g008480.1