evm.model.Chr01.220

Transcript Overview
Nameevm.model.Chr01.220
Unique Nameevm.model.Chr01.220_hau_v1
TypemRNA
OrganismVigna unguiculata subsp. sesquipedalis ()
Sequence length411
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr01chromosomeChr01:3294500..3294910 -Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvuaL0680Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuaL083Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL531Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavuaL238Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuaL551Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
psvuaL336Pisum sativum Cameor genome v1aPisum sativum
psvuaL340Pisum sativum Cameor genome v1aPisum sativum
pvvuaL117Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL179Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvuaL405Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL405Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuaL177Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuaL182Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuaL404Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaL295Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuavuaR004Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuazwsR026Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuazwsR039Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuvuaL001Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL069Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvuaL546Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuaL552Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvuaL136Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuaL201Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuaL497Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun01g026700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat05G0616600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan05g005000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004493345.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004510991.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg21222.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.011G203450.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat04G0482600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan08g001900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.005G024800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_004498628.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun11g012500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014645346.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.4g038840.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat5g220360.1Pisum sativum Cameor genome v1aPisum sativum
Ca_10900Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg14692.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.4g029720.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
evm.model.Chr11.121Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.TU.Chr01.220evm.TU.Chr01.220_hau_v1Vigna unguiculata subsp. sesquipedalisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr01.220.exon1evm.model.Chr01.220.exon1_hau_v1Vigna unguiculata subsp. sesquipedalisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Chr01.220cds.evm.model.Chr01.220_hau_v1Vigna unguiculata subsp. sesquipedalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr01.220_hau_v1evm.model.Chr01.220_hau_v1Vigna unguiculata subsp. sesquipedalispolypeptide
evm.model.Chr01.220_hau_v1evm.model.Chr01.220_hau_v1-proteinVigna unguiculata subsp. sesquipedalispolypeptide


Homology
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6M547|A0A4D6M547_VIGUN (VQ domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g325 PE=4 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 5.718e-98
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136
            MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI
Sbjct:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U487|A0A1S3U487_VIGRR (sigma factor binding protein 1, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106761778 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 8.192e-65
Identity = 107/137 (78.10%), Postives = 115/137 (83.94%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYS-HESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136
            MLG+ N H VMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADY Y+Y  D G+L DAN K TNIQQW    SETYS H+SN+WF     +HS+SFMEPLNGQLQ EF +FDMI
Sbjct:    1 MLGLDNKHGVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYSYDY--DHGLLHDANLKSTNIQQW----SETYSHHDSNSWF-----NHSTSFMEPLNGQLQCEFFNFDMI 126          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SKQ1|A0A0S3SKQ1_PHAAN (VQ domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G230800 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.271e-64
Identity = 112/136 (82.35%), Postives = 116/136 (85.29%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136
            MLGV NNH VMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADY Y    DDGVLDD   KGTNIQQWS GTSETYSH+S++       +HSSSFMEPLNGQLQ EF SFDMI
Sbjct:    1 MLGVDNNHGVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYYY----DDGVLDDVKLKGTNIQQWS-GTSETYSHDSSS-----WFNHSSSFMEPLNGQLQSEFFSFDMI 126          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UIE4|A0A0L9UIE4_PHAAN (VQ domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g005000 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.271e-64
Identity = 112/136 (82.35%), Postives = 116/136 (85.29%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136
            MLGV NNH VMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADY Y    DDGVLDD   KGTNIQQWS GTSETYSH+S++       +HSSSFMEPLNGQLQ EF SFDMI
Sbjct:    1 MLGVDNNHGVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYYY----DDGVLDDVKLKGTNIQQWS-GTSETYSHDSSS-----WFNHSSSFMEPLNGQLQSEFFSFDMI 126          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|V7BV58|V7BV58_PHAVU (VQ domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G024800g PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.998e-64
Identity = 110/137 (80.29%), Postives = 114/137 (83.21%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHH-HSSSFMEPLNGQLQYEFLSFDMI 136
            MLGV NNH VMMK KG+SKR  KKDVKVTYISSPMKVKTSASNFRALVQELTGQ SNVAEMFVEAD+ YNY   DGVLDD NQKG NIQQ S GTSETY H+S TWFKSLD H HS SFMEPLN QLQ E  SFD+I
Sbjct:    1 MLGVNNNHGVMMKSKGRSKRVHKKDVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEMFVEADF-YNY---DGVLDDGNQKGPNIQQLS-GTSETYFHDS-TWFKSLDDHLHSGSFMEPLNEQLQCELFSFDII 131          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A371HLQ6|A0A371HLQ6_MUCPR (Sigma factor binding protein 1, chloroplastic (Fragment) OS=Mucuna pruriens OX=157652 GN=SIB1 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.453e-40
Identity = 84/132 (63.64%), Postives = 91/132 (68.94%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKS--LDHHHSSSFMEPLNGQLQYEF 130
            MLGV NNHVVM K KGK+ R  KKDVKVTYISSPMKVKTSASNFRALVQELTGQ SNVAE+ +E DY  +  DDDGV      KG++ Q WS       S     WFK     H +S S MEPLNGQLQYEF
Sbjct:    1 MLGV-NNHVVM-KAKGKNIRSHKKDVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEVLMEPDYAAH--DDDGV-----HKGSSTQHWSLEAHLPVS----PWFKPDHYTHLYSRSSMEPLNGQLQYEF 119          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|I1JW30|I1JW30_SOYBN (VQ domain-containing protein OS=Glycine max OX=3847 GN=102665525 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.710e-39
Identity = 81/117 (69.23%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSS 117
            MLGV NNH VM KRKG+SKRG KK+VKVTYISSPMKVKTSASNFRALVQELTGQ SNVAEMFVEADY Y    DDGV      KG   QQWS  + E Y  ES TW K  D+ H +S
Sbjct:    1 MLGVNNNHAVM-KRKGQSKRGHKKNVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEMFVEADYYYGVHHDDGV-----HKGN--QQWS--SEEAYFPES-TWLKHDDYSHLNS 106          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A151QVK5|A0A151QVK5_CAJCA (VQ domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_044833 PE=4 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.000e-38
Identity = 78/130 (60.00%), Postives = 96/130 (73.85%), Query Frame = 0
Query:   12 MKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGT-NIQQWSTGTSETYSHESNTWFK----SLDHHHSSSFMEPLNGQLQYEFLSFDMI 136
            MK KG+SKR  K+D+KVTYISSP+KV+TSASNFRALVQELTGQ SNVAEMFVEADY  +  D++G+    ++KGT + QQ+ +   E Y   S TW K    + DH HS S M+PLN QLQY+ LSFDM+
Sbjct:    1 MKAKGQSKRNHKRDLKVTYISSPVKVETSASNFRALVQELTGQTSNVAEMFVEADYGAH--DNEGL----HKKGTISAQQYWSCEDEAYLPHS-TWLKPDYYTHDHLHSKSSMDPLNAQLQYQLLSFDML 123          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SL48|A0A0B2SL48_GLYSO (VQ domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_009609 PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.446e-38
Identity = 80/117 (68.38%), Postives = 85/117 (72.65%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSS 117
            MLGV NNH VM KRKG+SKRG KK+VKVTYISSPMKVKTSASNFRALVQELTGQ SNVAEMFVEADY Y    DDGV      KG   Q WS  + E Y  ES TW K  D+ H +S
Sbjct:    1 MLGVNNNHAVM-KRKGQSKRGHKKNVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEMFVEADYYYGVHHDDGV-----HKGN--QHWS--SEEAYFPES-TWLKHDDYSHLNS 106          
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|I3S4V2|I3S4V2_MEDTR (VQ domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0082031 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.706e-36
Identity = 80/138 (57.97%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWST--GTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136
            MLGV NNHV+  K++ K  + E   VKVTYISSPMKVKTSASNFRALVQELTGQ SNVA+MFVE +   + D      D  NQ+  +I+QWS+   +SE +  + +TW K  D ++  S MEPLNGQLQY+FLSFDMI
Sbjct:    8 MLGV-NNHVMKGKKQSKKNKKE---VKVTYISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVD------DVQNQQKNSIEQWSSDNNSSEGFMPDYSTWMKLEDDYNLRSSMEPLNGQLQYDFLSFDMI 135          
The following BLAST results are available for this feature:
BLAST of evm.model.Chr01.220 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of evm.model.Chr01.220 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6M547|A0A4D6M547_VIGUN5.718e-98100.00VQ domain-containing protein OS=Vigna unguiculata ... [more]
tr|A0A1S3U487|A0A1S3U487_VIGRR8.192e-6578.10sigma factor binding protein 1, chloroplastic OS=V... [more]
tr|A0A0S3SKQ1|A0A0S3SKQ1_PHAAN2.271e-6482.35VQ domain-containing protein OS=Vigna angularis va... [more]
tr|A0A0L9UIE4|A0A0L9UIE4_PHAAN2.271e-6482.35VQ domain-containing protein OS=Phaseolus angulari... [more]
tr|V7BV58|V7BV58_PHAVU7.998e-6480.29VQ domain-containing protein OS=Phaseolus vulgaris... [more]
tr|A0A371HLQ6|A0A371HLQ6_MUCPR3.453e-4063.64Sigma factor binding protein 1, chloroplastic (Fra... [more]
tr|I1JW30|I1JW30_SOYBN6.710e-3969.23VQ domain-containing protein OS=Glycine max OX=384... [more]
tr|A0A151QVK5|A0A151QVK5_CAJCA2.000e-3860.00VQ domain-containing protein OS=Cajanus cajan OX=3... [more]
tr|A0A0B2SL48|A0A0B2SL48_GLYSO4.446e-3868.38VQ domain-containing protein OS=Glycine soja OX=38... [more]
tr|I3S4V2|I3S4V2_MEDTR2.706e-3657.97VQ domain-containing protein OS=Medicago truncatul... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 31..54
e-value: 3.4E-12
score: 45.6
IPR039335Sigma factor binding protein 1/2PANTHERPTHR33624SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTICcoord: 6..115

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=411bp
ATGCTTGGAGTTAAGAACAACCATGTTGTGATGATGAAGAGAAAAGGGAA
GAGCAAAAGGGGTGAGAAGAAGGATGTTAAAGTGACATATATCTCAAGCC
CTATGAAGGTGAAGACCAGTGCCTCAAACTTCAGAGCCCTTGTGCAAGAA
CTCACAGGCCAGTTCTCCAATGTTGCTGAAATGTTTGTGGAAGCTGATTA
CTGTTACAATTATGATGATGATGATGGTGTTCTTGATGATGCTAACCAAA
AGGGCACAAACATTCAACAATGGAGTACTGGCACTAGTGAAACCTATTCT
CATGAGTCTAATACTTGGTTCAAATCTCTTGATCATCATCATTCCAGCTC
TTTCATGGAACCACTGAATGGACAACTTCAATATGAATTCTTGAGCTTTG
ATATGATTTAG
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protein sequence of evm.model.Chr01.220_hau_v1

>evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=136bp
MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQE
LTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYS
HESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI
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mRNA from alignment at Chr01:3294500..3294910-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=411bp; location=Sequence derived from: Chr01:3294500..3294910- (Vigna unguiculata subsp. sesquipedalis
ATGCTTGGAGTTAAGAACAACCATGTTGTGATGATGAAGAGAAAAGGGAA GAGCAAAAGGGGTGAGAAGAAGGATGTTAAAGTGACATATATCTCAAGCC CTATGAAGGTGAAGACCAGTGCCTCAAACTTCAGAGCCCTTGTGCAAGAA CTCACAGGCCAGTTCTCCAATGTTGCTGAAATGTTTGTGGAAGCTGATTA CTGTTACAATTATGATGATGATGATGGTGTTCTTGATGATGCTAACCAAA AGGGCACAAACATTCAACAATGGAGTACTGGCACTAGTGAAACCTATTCT CATGAGTCTAATACTTGGTTCAAATCTCTTGATCATCATCATTCCAGCTC TTTCATGGAACCACTGAATGGACAACTTCAATATGAATTCTTGAGCTTTG ATATGATTTAG
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Coding sequence (CDS) from alignment at Chr01:3294500..3294910-

>evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=411bp; location=Sequence derived from: Chr01:3294500..3294910- (Vigna unguiculata subsp. sesquipedalis
ATGCTTGGAGTTAAGAACAACCATGTTGTGATGATGAAGAGAAAAGGGAA
GAGCAAAAGGGGTGAGAAGAAGGATGTTAAAGTGACATATATCTCAAGCC
CTATGAAGGTGAAGACCAGTGCCTCAAACTTCAGAGCCCTTGTGCAAGAA
CTCACAGGCCAGTTCTCCAATGTTGCTGAAATGTTTGTGGAAGCTGATTA
CTGTTACAATTATGATGATGATGATGGTGTTCTTGATGATGCTAACCAAA
AGGGCACAAACATTCAACAATGGAGTACTGGCACTAGTGAAACCTATTCT
CATGAGTCTAATACTTGGTTCAAATCTCTTGATCATCATCATTCCAGCTC
TTTCATGGAACCACTGAATGGACAACTTCAATATGAATTCTTGAGCTTTG
ATATGATTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ
IPR039335SIB1/2
Vocabulary: Biological Process
TermDefinition
GO:0051091positive regulation of DNA-binding transcription factor activity