evm.model.Chr01.220
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6M547|A0A4D6M547_VIGUN (VQ domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g325 PE=4 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 5.718e-98 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI Sbjct: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U487|A0A1S3U487_VIGRR (sigma factor binding protein 1, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106761778 PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 8.192e-65 Identity = 107/137 (78.10%), Postives = 115/137 (83.94%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYS-HESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136 MLG+ N H VMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADY Y+Y D G+L DAN K TNIQQW SETYS H+SN+WF +HS+SFMEPLNGQLQ EF +FDMI Sbjct: 1 MLGLDNKHGVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYSYDY--DHGLLHDANLKSTNIQQW----SETYSHHDSNSWF-----NHSTSFMEPLNGQLQCEFFNFDMI 126
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SKQ1|A0A0S3SKQ1_PHAAN (VQ domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G230800 PE=4 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.271e-64 Identity = 112/136 (82.35%), Postives = 116/136 (85.29%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136 MLGV NNH VMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADY Y DDGVLDD KGTNIQQWS GTSETYSH+S++ +HSSSFMEPLNGQLQ EF SFDMI Sbjct: 1 MLGVDNNHGVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYYY----DDGVLDDVKLKGTNIQQWS-GTSETYSHDSSS-----WFNHSSSFMEPLNGQLQSEFFSFDMI 126
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UIE4|A0A0L9UIE4_PHAAN (VQ domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g005000 PE=4 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.271e-64 Identity = 112/136 (82.35%), Postives = 116/136 (85.29%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136 MLGV NNH VMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADY Y DDGVLDD KGTNIQQWS GTSETYSH+S++ +HSSSFMEPLNGQLQ EF SFDMI Sbjct: 1 MLGVDNNHGVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYYY----DDGVLDDVKLKGTNIQQWS-GTSETYSHDSSS-----WFNHSSSFMEPLNGQLQSEFFSFDMI 126
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|V7BV58|V7BV58_PHAVU (VQ domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G024800g PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 7.998e-64 Identity = 110/137 (80.29%), Postives = 114/137 (83.21%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHH-HSSSFMEPLNGQLQYEFLSFDMI 136 MLGV NNH VMMK KG+SKR KKDVKVTYISSPMKVKTSASNFRALVQELTGQ SNVAEMFVEAD+ YNY DGVLDD NQKG NIQQ S GTSETY H+S TWFKSLD H HS SFMEPLN QLQ E SFD+I Sbjct: 1 MLGVNNNHGVMMKSKGRSKRVHKKDVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEMFVEADF-YNY---DGVLDDGNQKGPNIQQLS-GTSETYFHDS-TWFKSLDDHLHSGSFMEPLNEQLQCELFSFDII 131
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A371HLQ6|A0A371HLQ6_MUCPR (Sigma factor binding protein 1, chloroplastic (Fragment) OS=Mucuna pruriens OX=157652 GN=SIB1 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.453e-40 Identity = 84/132 (63.64%), Postives = 91/132 (68.94%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKS--LDHHHSSSFMEPLNGQLQYEF 130 MLGV NNHVVM K KGK+ R KKDVKVTYISSPMKVKTSASNFRALVQELTGQ SNVAE+ +E DY + DDDGV KG++ Q WS S WFK H +S S MEPLNGQLQYEF Sbjct: 1 MLGV-NNHVVM-KAKGKNIRSHKKDVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEVLMEPDYAAH--DDDGV-----HKGSSTQHWSLEAHLPVS----PWFKPDHYTHLYSRSSMEPLNGQLQYEF 119
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|I1JW30|I1JW30_SOYBN (VQ domain-containing protein OS=Glycine max OX=3847 GN=102665525 PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.710e-39 Identity = 81/117 (69.23%), Postives = 86/117 (73.50%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSS 117 MLGV NNH VM KRKG+SKRG KK+VKVTYISSPMKVKTSASNFRALVQELTGQ SNVAEMFVEADY Y DDGV KG QQWS + E Y ES TW K D+ H +S Sbjct: 1 MLGVNNNHAVM-KRKGQSKRGHKKNVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEMFVEADYYYGVHHDDGV-----HKGN--QQWS--SEEAYFPES-TWLKHDDYSHLNS 106
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A151QVK5|A0A151QVK5_CAJCA (VQ domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_044833 PE=4 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.000e-38 Identity = 78/130 (60.00%), Postives = 96/130 (73.85%), Query Frame = 0 Query: 12 MKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGT-NIQQWSTGTSETYSHESNTWFK----SLDHHHSSSFMEPLNGQLQYEFLSFDMI 136 MK KG+SKR K+D+KVTYISSP+KV+TSASNFRALVQELTGQ SNVAEMFVEADY + D++G+ ++KGT + QQ+ + E Y S TW K + DH HS S M+PLN QLQY+ LSFDM+ Sbjct: 1 MKAKGQSKRNHKRDLKVTYISSPVKVETSASNFRALVQELTGQTSNVAEMFVEADYGAH--DNEGL----HKKGTISAQQYWSCEDEAYLPHS-TWLKPDYYTHDHLHSKSSMDPLNAQLQYQLLSFDML 123
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SL48|A0A0B2SL48_GLYSO (VQ domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_009609 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.446e-38 Identity = 80/117 (68.38%), Postives = 85/117 (72.65%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWSTGTSETYSHESNTWFKSLDHHHSSS 117 MLGV NNH VM KRKG+SKRG KK+VKVTYISSPMKVKTSASNFRALVQELTGQ SNVAEMFVEADY Y DDGV KG Q WS + E Y ES TW K D+ H +S Sbjct: 1 MLGVNNNHAVM-KRKGQSKRGHKKNVKVTYISSPMKVKTSASNFRALVQELTGQASNVAEMFVEADYYYGVHHDDGV-----HKGN--QHWS--SEEAYFPES-TWLKHDDYSHLNS 106
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Match: tr|I3S4V2|I3S4V2_MEDTR (VQ domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0082031 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.706e-36 Identity = 80/138 (57.97%), Postives = 98/138 (71.01%), Query Frame = 0 Query: 1 MLGVKNNHVVMMKRKGKSKRGEKKDVKVTYISSPMKVKTSASNFRALVQELTGQFSNVAEMFVEADYCYNYDDDDGVLDDANQKGTNIQQWST--GTSETYSHESNTWFKSLDHHHSSSFMEPLNGQLQYEFLSFDMI 136 MLGV NNHV+ K++ K + E VKVTYISSPMKVKTSASNFRALVQELTGQ SNVA+MFVE + + D D NQ+ +I+QWS+ +SE + + +TW K D ++ S MEPLNGQLQY+FLSFDMI Sbjct: 8 MLGV-NNHVMKGKKQSKKNKKE---VKVTYISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVD------DVQNQQKNSIEQWSSDNNSSEGFMPDYSTWMKLEDDYNLRSSMEPLNGQLQYDFLSFDMI 135 The following BLAST results are available for this feature:
BLAST of evm.model.Chr01.220 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot) Total hits: 0
BLAST of evm.model.Chr01.220 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11) Total hits: 0
BLAST of evm.model.Chr01.220 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=411bpback to top protein sequence of evm.model.Chr01.220_hau_v1 >evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=136bpback to top mRNA from alignment at Chr01:3294500..3294910- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=411bp; location=Sequence derived from: Chr01:3294500..3294910- (Vigna unguiculata subsp. sesquipedalisback to top Coding sequence (CDS) from alignment at Chr01:3294500..3294910- >evm.model.Chr01.220_hau_v1 ID=evm.model.Chr01.220_hau_v1; Name=evm.model.Chr01.220; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=411bp; location=Sequence derived from: Chr01:3294500..3294910- (Vigna unguiculata subsp. sesquipedalisback to top |