evm.model.Chr01.391

Transcript Overview


Name	evm.model.Chr01.391
Unique Name	evm.model.Chr01.391_hau_v1
Type	mRNA
Organism	Vigna unguiculata subsp. sesquipedalis ()
Sequence length	393

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr01	chromosome	Chr01:6796382..6799627 +	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	2023-06-12
InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	2023-06-13
Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot	2023-06-13
Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11	2023-06-13
Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL	2023-06-13

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
anvuaL0510	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuaL0826	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caivuaL001	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
asvuaL530	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
psvuaL000	Pisum sativum Cameor genome v1a	Pisum sativum
psvuaL006	Pisum sativum Cameor genome v1a	Pisum sativum
pvvuaL405	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
vrvvuaL295	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vuazwsR000	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vssvuaL136	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vuvuaL001	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
canvuaL003	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
LR48_mrnaVigan05g043600	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Ca_01602.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
rna-XM_004488401.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Psat01G0358600-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
jg12515.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-TanjilR_14310	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-XM_014644621.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Phvul.005G041100.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Psat1g127480.1	Pisum sativum Cameor genome v1a	Pisum sativum
Vigun01g045600.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
evm.TU.Chr01.391	evm.TU.Chr01.391_hau_v1	Vigna unguiculata subsp. sesquipedalis	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.Chr01.391.utr5p1	evm.model.Chr01.391.utr5p1_hau_v1	Vigna unguiculata subsp. sesquipedalis	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.Chr01.391.exon1	evm.model.Chr01.391.exon1_hau_v1	Vigna unguiculata subsp. sesquipedalis	exon
evm.model.Chr01.391.exon2	evm.model.Chr01.391.exon2_hau_v1	Vigna unguiculata subsp. sesquipedalis	exon
evm.model.Chr01.391.exon3	evm.model.Chr01.391.exon3_hau_v1	Vigna unguiculata subsp. sesquipedalis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.evm.model.Chr01.391	cds.evm.model.Chr01.391_hau_v1	Vigna unguiculata subsp. sesquipedalis	CDS
cds.evm.model.Chr01.391	cds.evm.model.Chr01.391_hau_v1_2	Vigna unguiculata subsp. sesquipedalis	CDS
cds.evm.model.Chr01.391	cds.evm.model.Chr01.391_hau_v1_3	Vigna unguiculata subsp. sesquipedalis	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.Chr01.391.utr3p1	evm.model.Chr01.391.utr3p1_hau_v1	Vigna unguiculata subsp. sesquipedalis	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.Chr01.391_hau_v1	evm.model.Chr01.391_hau_v1	Vigna unguiculata subsp. sesquipedalis	polypeptide
evm.model.Chr01.391_hau_v1	evm.model.Chr01.391_hau_v1-protein	Vigna unguiculata subsp. sesquipedalis	polypeptide

Homology

[Close]

BLAST of evm.model.Chr01.391 vs. Araport11
Match: AT2G44360.1 (| ecotropic viral integration site protein | Chr2:18320855-18321584 REVERSE LENGTH=135 | 201606)

HSP 1 Score: 190.274 bits (482), Expect = 2.004e-63
Identity = 95/117 (81.20%), Postives = 104/117 (88.89%), Query Frame = 0

Query:    4 EGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDN 120
            EGKPD QLFQLLS LL QVE LTN EEVELRSKIE LG+EVTKVPSKS QHLNEVEIAKELDKLSA+LDD+DEMIS+++ASDPQVQ+LLS TADVWMPVITA +EER NFTA   D+
Sbjct:    3 EGKPDEQLFQLLSGLLQQVESLTNTEEVELRSKIEALGLEVTKVPSKSAQHLNEVEIAKELDKLSAKLDDVDEMISSAIASDPQVQTLLSGTADVWMPVITAGAEERLNFTASLADD 119

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UJT1|A0A0L9UJT1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g043600 PE=4 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.763e-86
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            MGEEGKPDAQLFQLLSNLL QVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ
Sbjct:    1 MGEEGKPDAQLFQLLSNLLQQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U260|A0A1S3U260_VIGRR (uncharacterized protein LOC106761111 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761111 PE=4 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.763e-86
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            MGEEGKPDAQLFQLLSNLL QVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ
Sbjct:    1 MGEEGKPDAQLFQLLSNLLQQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|T2DQ02|T2DQ02_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G041100g PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.999e-79
Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            M EEGKPDAQLFQLL+NLL QVEELTNQEEVELR KIETLG+EV KVPSKSTQHLNE EIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTA TG+NT QPDAEK Q
Sbjct:    1 MAEEGKPDAQLFQLLANLLHQVEELTNQEEVELRCKIETLGLEVKKVPSKSTQHLNEFEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAATGENTLQPDAEKFQ 130

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|I1MJJ2|I1MJJ2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100777666 PE=4 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.042e-75
Identity = 115/130 (88.46%), Postives = 122/130 (93.85%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            M EEGKPD QLFQLLSNLL QVE LTNQEEVELRSKIETLG+EVTKVPSKSTQHLNE+EIA+ELDKLSARLD+LDEMIS+SMASDPQVQSLLSDTADVWMPVITATSEERRNFTA TGD+T Q D EKS+
Sbjct:    1 MAEEGKPDEQLFQLLSNLLHQVESLTNQEEVELRSKIETLGLEVTKVPSKSTQHLNELEIAEELDKLSARLDNLDEMISSSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAATGDSTLQTDVEKSK 130

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2SW17|A0A0B2SW17_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_042172 PE=4 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.042e-75
Identity = 115/130 (88.46%), Postives = 122/130 (93.85%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            M EEGKPD QLFQLLSNLL QVE LTNQEEVELRSKIETLG+EVTKVPSKSTQHLNE+EIA+ELDKLSARLD+LDEMIS+SMASDPQVQSLLSDTADVWMPVITATSEERRNFTA TGD+T Q D EKS+
Sbjct:    1 MAEEGKPDEQLFQLLSNLLHQVESLTNQEEVELRSKIETLGLEVTKVPSKSTQHLNELEIAEELDKLSARLDNLDEMISSSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAATGDSTLQTDVEKSK 130

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A6P6G734|A0A6P6G734_ZIZJJ (uncharacterized protein LOC107435258 OS=Ziziphus jujuba OX=326968 GN=LOC107435258 PE=4 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.503e-65
Identity = 101/129 (78.29%), Postives = 116/129 (89.92%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKS 129
            M E+ K D QLFQLLSNLL QVEELTNQEEVELRSKIE LG+EVTKVPSKSTQHLNE+EIAKELDKLSA+LDD+DEMIS++MA+DP+VQSLLS TADVWMPVITAT++ERRNFTA  GD+ ++  A+ S
Sbjct:    1 MAEDQKVDTQLFQLLSNLLNQVEELTNQEEVELRSKIEALGLEVTKVPSKSTQHLNELEIAKELDKLSAKLDDVDEMISSAMAADPEVQSLLSGTADVWMPVITATADERRNFTASIGDDNSEKQAKSS 129

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7HZG2|A0A1J7HZG2_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_14310 PE=4 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.645e-65
Identity = 101/130 (77.69%), Postives = 116/130 (89.23%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            M EEGKPDAQLFQLLSNLL QVE LTNQEEVELRSKIE LG+EVTKVPS+ST+ LNE+EIAKELDKLSA+LDD+DEMIS++MASDPQV+S+LS TADVW+PVITATSEER  F+ V GDN+ Q + E S+
Sbjct:    1 MAEEGKPDAQLFQLLSNLLQQVESLTNQEEVELRSKIEALGLEVTKVPSRSTRPLNEMEIAKELDKLSAKLDDVDEMISSTMASDPQVRSILSGTADVWLPVITATSEERSKFSVVPGDNSTQTEEENSK 130

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4ML25|A0A6A4ML25_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr25g0283591 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.828e-64
Identity = 101/130 (77.69%), Postives = 113/130 (86.92%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            M EEGKPDAQLFQLLSNLL QVE LTNQEEVELRSKIE LG+EVTKVPS ST+ LNE+EIAKELDKLSA+LDD+DEMIS++MA DPQV+S+LS TADVW+PVITATSEER  FT V GDN  Q + E S+
Sbjct:    1 MAEEGKPDAQLFQLLSNLLQQVESLTNQEEVELRSKIEALGLEVTKVPSNSTRPLNELEIAKELDKLSAKLDDVDEMISSTMAEDPQVRSILSGTADVWLPVITATSEERSKFTVVPGDNITQTEDENSK 130

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5M1B7|A0A6A5M1B7_LUPAL (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00024272 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.936e-64
Identity = 101/130 (77.69%), Postives = 113/130 (86.92%), Query Frame = 0

Query:    1 MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKSQ 130
            M EEGKPDAQLFQLLSNLL QVE LTNQEEVELRSKIE LG+EVTKVPS ST+ LNE+EIAKELDKLSA+LDD+DEMIS++MA DPQV+S+LS TADVW+PVITATSEER  FT V GDN  Q + E S+
Sbjct:   40 MAEEGKPDAQLFQLLSNLLQQVESLTNQEEVELRSKIEALGLEVTKVPSNSTRPLNELEIAKELDKLSAKLDDVDEMISSTMAEDPQVRSILSGTADVWLPVITATSEERSKFTVVPGDNITQTEDENSK 169

[Close]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Match: tr|A0A2C9V8J2|A0A2C9V8J2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G151800 PE=4 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.529e-63
Identity = 101/130 (77.69%), Postives = 116/130 (89.23%), Query Frame = 0

Query:    1 MGEEG-KPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSKSTQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWMPVITATSEERRNFTAVTGDNTAQPDAEKS 129
            M EEG K DAQLFQLLSNLL QVE LTNQEEVELRSKIE LG+EVTKVPSKST++L+E+EIA+ELDKLSA+LDD+DEMIS++MA+DPQVQSLLS TADVWMPVITAT+EERRNFTA  GD+T +   + S
Sbjct:    1 MAEEGSKADAQLFQLLSNLLQQVEALTNQEEVELRSKIEALGLEVTKVPSKSTKNLDELEIARELDKLSAKLDDVDEMISSAMAADPQVQSLLSGTADVWMPVITATAEERRNFTASLGDDTTEEKVQTS 130

The following BLAST results are available for this feature:

BLAST of evm.model.Chr01.391 vs.
BLAST of evm.model.Chr01.391 vs. Araport11
BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL

BLAST of evm.model.Chr01.391 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of evm.model.Chr01.391 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G44360.1	2.004e-63	81.20	\| ecotropic viral integration site protein \| Chr2:...	[more]

BLAST of evm.model.Chr01.391 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
tr\|A0A0L9UJT1\|A0A0L9UJT1_PHAAN	1.763e-86	99.23	Uncharacterized protein OS=Phaseolus angularis OX=...	[more]
tr\|A0A1S3U260\|A0A1S3U260_VIGRR	1.763e-86	99.23	uncharacterized protein LOC106761111 OS=Vigna radi...	[more]
tr\|T2DQ02\|T2DQ02_PHAVU	2.999e-79	91.54	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|I1MJJ2\|I1MJJ2_SOYBN	1.042e-75	88.46	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0A0B2SW17\|A0A0B2SW17_GLYSO	1.042e-75	88.46	Uncharacterized protein OS=Glycine soja OX=3848 GN...	[more]
tr\|A0A6P6G734\|A0A6P6G734_ZIZJJ	2.503e-65	78.29	uncharacterized protein LOC107435258 OS=Ziziphus j...	[more]
tr\|A0A1J7HZG2\|A0A1J7HZG2_LUPAN	2.645e-65	77.69	Uncharacterized protein OS=Lupinus angustifolius O...	[more]
tr\|A0A6A4ML25\|A0A6A4ML25_LUPAL	5.828e-64	77.69	Uncharacterized protein OS=Lupinus albus OX=3870 G...	[more]
tr\|A0A6A5M1B7\|A0A6A5M1B7_LUPAL	6.936e-64	77.69	Uncharacterized protein OS=Lupinus albus OX=3870 G...	[more]
tr\|A0A2C9V8J2\|A0A2C9V8J2_MANES	1.529e-63	77.69	Uncharacterized protein OS=Manihot esculenta OX=39...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..130
None	No IPR available	PANTHER	PTHR37727	ECOTROPIC VIRAL INTEGRATION SITE PROTEIN	coord: 1..128

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr01:6796382..6799627+
coding sequence from alignment at Chr01:6796382..6799627+

mRNA sequence

>evm.model.Chr01.391_hau_v1 ID=evm.model.Chr01.391_hau_v1; Name=evm.model.Chr01.391; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=393bp
ATGGGAGAGGAAGGCAAACCCGACGCTCAGCTCTTTCAGCTTCTCTCCAA
TCTTCTCCTGCAGGTGGAAGAACTGACGAATCAAGAAGAAGTTGAGCTCC
GTTCTAAAATTGAAACCCTTGGAGTAGAGGTTACAAAAGTTCCTTCAAAG
TCAACCCAGCACCTTAACGAGGTGGAAATCGCCAAGGAGTTGGACAAATT
ATCAGCAAGATTAGATGATCTTGATGAGATGATATCGACCTCAATGGCTT
CAGATCCACAGGTGCAATCATTGTTGAGTGATACAGCTGATGTGTGGATG
CCAGTTATCACAGCAACCTCTGAGGAAAGACGCAATTTCACAGCAGTTAC
TGGGGATAACACCGCCCAACCAGATGCCGAAAAGTCTCAATAG

protein sequence of evm.model.Chr01.391_hau_v1

>evm.model.Chr01.391_hau_v1 ID=evm.model.Chr01.391_hau_v1; Name=evm.model.Chr01.391_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=130bp
MGEEGKPDAQLFQLLSNLLLQVEELTNQEEVELRSKIETLGVEVTKVPSK
STQHLNEVEIAKELDKLSARLDDLDEMISTSMASDPQVQSLLSDTADVWM
PVITATSEERRNFTAVTGDNTAQPDAEKSQ

mRNA from alignment at Chr01:6796382..6799627+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>evm.model.Chr01.391_hau_v1 ID=evm.model.Chr01.391_hau_v1; Name=evm.model.Chr01.391; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=3246bp; location=Sequence derived from: Chr01:6796382..6799627+ (Vigna unguiculata subsp. sesquipedalis
GTCTCTTGTCTCTCACTTCCTCTCTGTTCTGCTAAAACAGGGGGAAAGAG
AGAAAACGGGAGAGCGTCTTTGAAAGCATCAACAACATCACTAATCAGAG
CGGTTTCAGAGAAATCCCATGGGAGAGGAAGGCAAACCCGACGCTCAGCT
CTTTCAGCTTCTCTCCAATCTTCTCCTGCAGGTTCGTCTTTTCATCTCAA
TCTCTTATTAGTTTTTCAATATCTTGTTCCAATTTCGAATTAACCTTCAA
TTTTCCTTTTTTATGGAATTTGATCATTTCGGTATCTCACTGTTTGCCAT
CTTATGATTCTGAGATCCGTCAATTGCGTTTCTGTTGCTATTTTATTCTG
GTTTCGTGCTTCAATCCAGTTGAATTTTACATCCTGTATTCTACTCCCTT
TGTTTTTACAACTTTTCATCATGCCTTTTGAGGTTGCTGAATTGTGGTTA
ATCCTTGTTAGGGTGAATGTAATTGTATCAACGGTGTGTTTTCCTCTATT
TGCTTAATATTACTCGTAGTGACTCGTGAGAGTTTGTTGTTTCTCTTGTG
GAAAGTAAAGGGTTACTGCAACTGTGTGGTTGGCTAAATGGCAAATCCTA
TTTATCTGTTGTTGTTTGTGTGATTCCTTGAAGATGGGGGGCATAATCGT
TCTAGAGCCAAAACAATCATGCTTTGTAATTTTTTGTTCTTTGTTCTTAA
AATCTGTGAATTTGGGAGATAAAAGCAATTTTCTAGTTATTCTGATATGT
CATGATCTGAATTTGTATGATAAATACGAGTCTTAGATGAATAATTGGAA
GTCAATCGTTCTTTGTGAGATGTAGTTAGATACCATCATATCAAAACATT
AGAGTCTTATAAAAAAAAATCAAACAAAAATTTGATGGGTATTGATATGA
GTTAAAAGAATAACTAGCATGACGCTGCGGTCATCAATTTTCATCAGACA
CTGTCCTTACCCTTTTGAGAATGATTTCCTTTGATCATCCTTCTTCTAGC
TGCATGATTTCTTGTGTTTCTTAGCTTTCATTGCATCTGCGATGGCTGCG
TGACTCAAGCATCCAAAATTTTGACTGTGCAGCCAGTGTCTGCATTCATT
GCTATGCCATCATCTGATATAGTTAGTACACCCTAGAGCTCTAATATTGT
AATACGTTTCTCCGGAATTAACAATATCGTTGTGAACGTATTGACGTATA
GCCACATCTTTTTCATCAACTCATGACCTATCACTCATTTTTCATGTCAG
CATTATATCTCCTTTGTCCATGTTTCAATTATGAATGATTTTTGGATAAT
AGTGATGCAAGGGAAACAAAAAGGTAATTATATCTACCTTTAATAGTGTG
TTTGGACCAAGTTATTGATTGATCATTGATAAAAGTAATTGTTTGTTTTC
AAAGTTCGGAGGTGAAGGAGCACTAGTGTTGGATATTGTAAAATGACTGC
CAAAACCCCGTTCCGTTAGGCTGGGTTGTAGTACAATCAATAGTTTTTAA
TGGTTTCACTTAAAGTCTTTCCTGATCAACTTGAGCAATGAGCATCTAAT
TAGTGGATTATTGTCCATGTGGTCAACACTTTCAACTGGCACTTCTGATG
CTCTTTTCAACTGTTCAAATTTGAGGATACTGTATCAAAATGATAAGGGC
AGCCATGTTTGTGAGCAGTAGACGTAAGTAATACAGATCCTTTCCCTGCA
ATGGAGAGGCTGCTGTTTCTAGGATATTTACCAGAGACTCTAAAATGAGT
ATACTGTACACAAAAAGAAAAAATATATAGCCTTTCTGTTGAAATTACGG
AGCTGTGGATTTCTACATTAAGAATCTGTACTGTGAATTTTACATAACCG
TTTACAGTGTAATGAACTGAATTTTCTGTATTGTAGTGTTTTCTGGCTGA
GAAGAATATCTGAATAGTGTTAAGCGATCTATACTTCATGTAACTACGAT
CTTAATCCCCTGTTTCTTATAATTAGATTTAACTTGATTTCAATTTTCTT
GTAAACATAACAGGAGTAGTAGACTAATTTTTTCACCTCTATGAATTTGA
TTTGTTTTACTCATGATTTTAATATCTATGGTCGTTGTTTCTACAAATTG
CTAACTTCTAAATCACTTAATATAGTCATTTCTATTGCATAAATTGAAGA
TTGTTACATATAAATGCTTCTTCACTGGATTCCATCCACAGTTTCACTTC
CAATGCAATATGTCTTAACAATGGTTGTTGTATAATATACTCATGCATTC
TTTATGGTAAATAGGTGGAAGAACTGACGAATCAAGAAGAAGTTGAGCTC
CGTTCTAAAATTGAAACCCTTGGAGTAGAGGTTACAAAAGTTCCTTCAAA
GTCAACCCAGCACCTTAACGAGGTGATTTTCACTTTATAGTCAGCCATTA
ATCAATGTAGAGTTCTCTTATACATGTTGATATGGGTTAGAATGTGAAAA
TTTTATATCATATCTTAGATTATCCTCAGAAGTAGTTTTCTTATTTCCTC
GTTGTCTCTTAGGATTAGCGACCATCTTTCTTTTCTTATGATGTTATTTC
TTAATTGGTCAGGATTATGATTAGTGTAAATGAGGGTTAGTTAGCACTTG
AAGTTTTGTGAACATAACAAACACAACCTCAACAAAAGGAAATAACATTC
TGGTTTTGTTATTTTATTTTCTTTGTTTATCTGCATAGGTGGAAATCGCC
AAGGAGTTGGACAAATTATCAGCAAGATTAGATGATCTTGATGAGATGAT
ATCGACCTCAATGGCTTCAGATCCACAGGTGCAATCATTGTTGAGTGATA
CAGCTGATGTGTGGATGCCAGTTATCACAGCAACCTCTGAGGAAAGACGC
AATTTCACAGCAGTTACTGGGGATAACACCGCCCAACCAGATGCCGAAAA
GTCTCAATAGCTTCCTATTTTCTTGGCTTTAAGATTGGACTATTGTTTGA
AGAAGCACTAAAAACCAGTGTTTCAATATATTCTTATTGGCGTATCAATC
AAATATTGAAATTGGGAAAAGATAGAAAAAGGAAGATCTTACTTGTTGGG
TTTTGAGCCATTCTACAAGGGGAGAGTTGTTGAGCATGATAAGATCTTTG
GTGCAATATCCCATCAGAAGCCGATCCTCATAATCTTCACTTACATTCTG
ATTTCTCTAATTCTTCCCAGAGACCCAAGTTAAGTTATTTTTCCACGTGC
TAAATCAAATTTTCTTCATGGAAAAATAATACCATTTTATGAAATC

Coding sequence (CDS) from alignment at Chr01:6796382..6799627+

>evm.model.Chr01.391_hau_v1 ID=evm.model.Chr01.391_hau_v1; Name=evm.model.Chr01.391; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=393bp; location=Sequence derived from: Chr01:6796382..6799627+ (Vigna unguiculata subsp. sesquipedalis
ATGGGAGAGGAAGGCAAACCCGACGCTCAGCTCTTTCAGCTTCTCTCCAA
TCTTCTCCTGCAGGTGGAAGAACTGACGAATCAAGAAGAAGTTGAGCTCC
GTTCTAAAATTGAAACCCTTGGAGTAGAGGTTACAAAAGTTCCTTCAAAG
TCAACCCAGCACCTTAACGAGGTGGAAATCGCCAAGGAGTTGGACAAATT
ATCAGCAAGATTAGATGATCTTGATGAGATGATATCGACCTCAATGGCTT
CAGATCCACAGGTGCAATCATTGTTGAGTGATACAGCTGATGTGTGGATG
CCAGTTATCACAGCAACCTCTGAGGAAAGACGCAATTTCACAGCAGTTAC
TGGGGATAACACCGCCCAACCAGATGCCGAAAAGTCTCAATAG

Search form

evm.model.Chr01.391