evm.model.Chr03.1079

Transcript Overview
Nameevm.model.Chr03.1079
Unique Nameevm.model.Chr03.1079_hau_v1
TypemRNA
OrganismVigna unguiculata subsp. sesquipedalis ()
Sequence length591
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03chromosomeChr03:11354784..11355374 +Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvuaL0032Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0202Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0377Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0529Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0759Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuaL022Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL140Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivuaL029Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuaL865Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuaL022Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuaL0065Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuaL0457Cajanus cajan Asha genome v1.0Cajanus cajan
cavuaL585Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvuaL030Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuaL021Pisum sativum Cameor genome v1aPisum sativum
psvuaL279Pisum sativum Cameor genome v1aPisum sativum
psvuaL289Pisum sativum Cameor genome v1aPisum sativum
crvuaL868Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
tifvuaL037Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvuaL286Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuaL459Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL444Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuaL037Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuaL446Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaL047Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuaL480Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuavuaR153Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vssvuaL033Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuazwsR195Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vssvuaL296Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuaL297Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuazwsR232Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuvuaL161Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL302Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaL023Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuaL533Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan09g195300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.003G082200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014662551.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.1g367880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_09365Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014652888.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat04G0013600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_004486140.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg39084.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.4g186400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_22003.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_004507602.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.1g448520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_02257.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_03398Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_27195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_00676Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-KK1_004577Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun03g443200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun06g156900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat01G0483500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat1g177600.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.006G145000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg48606.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_02541.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cr_22190.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.4g242440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat4g005200.1Pisum sativum Cameor genome v1aPisum sativum
LR48_mrnaVigan01g322800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_017256Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
evm.model.Chr06.1633Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.TU.Chr03.1079evm.TU.Chr03.1079_hau_v1Vigna unguiculata subsp. sesquipedalisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr03.1079.exon1evm.model.Chr03.1079.exon1_hau_v1Vigna unguiculata subsp. sesquipedalisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Chr03.1079cds.evm.model.Chr03.1079_hau_v1Vigna unguiculata subsp. sesquipedalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr03.1079_hau_v1evm.model.Chr03.1079_hau_v1Vigna unguiculata subsp. sesquipedalispolypeptide
evm.model.Chr03.1079_hau_v1evm.model.Chr03.1079_hau_v1-proteinVigna unguiculata subsp. sesquipedalispolypeptide


Homology
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT4G03965.1 (| RING/U-box superfamily protein | Chr4:1889576-1890205 FORWARD LENGTH=209 | 201606)

HSP 1 Score: 173.326 bits (438), Expect = 9.851e-55
Identity = 105/221 (47.51%), Postives = 126/221 (57.01%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEG--------RMSLMRLLEEK------EGGEDA-----------AVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLG+   ++     ++ T L LL  QMD +D ++RR+RTLKERL F  +GCCG TW  R  L    G       + +   G D         GP   G    MNLA ALAAER  R  E          ++SLMRLLEE       E  E              V+NDSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNR +++IL I+
Sbjct:    1 MSQLGVETSQAQPETPQSTTFLDLLRLQMDGLDRSRRRKRTLKERLGFKRIGCCGPTWGLR--LTSNTGEDDDEPFENRLVSGSD------HVTGPLNQG----MNLATALAAERNYRTEETEASGSLTPLKVSLMRLLEETAERVVVEENETERVTASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT4G22250.1 (| RING/U-box superfamily protein | Chr4:11767685-11768329 REVERSE LENGTH=214 | 201606)

HSP 1 Score: 166.007 bits (419), Expect = 8.617e-52
Identity = 105/208 (50.48%), Postives = 122/208 (58.65%), Query Frame = 0 
Query:   21 ILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFR---------PTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLR-ESEEG-------RMSLMRLLEEK------EGGEDAAV---------DNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
             L LL  QM   D   RR+RTLKERLRF  +GCCG TW  R         PT RD+    +  +LQ +T             V     GSG+GMNLA AL AER  R ES E        R+SLMRLLEE       + G++  +          NDSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNR +++IL IF
Sbjct:   23 FLDLLRRQMSGHD-LTRRKRTLKERLRFKCIGCCGPTWNLRLTNNTTLHSPTSRDD----EIEELQIETG-----------LVLESDHGSGTGMNLATALEAERYNRGESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT1G62370.1 (| RING/U-box superfamily protein | Chr1:23072575-23073189 FORWARD LENGTH=204 | 201606)

HSP 1 Score: 150.599 bits (379), Expect = 9.162e-46
Identity = 95/212 (44.81%), Postives = 123/212 (58.02%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLT--DQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTP-------QPPQLQQQTNPGQDPNP-NRPECVGPRGSGSGSGMNLAAALAAERQLRESEE----GRMSLMRLLEEKEGGEDAA--VDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLG +L+ES    R  RT++  L   DQ++  D    +  TLK+RLRF  +GCCG     R  LR +  TP          + Q Q     DP      +C+       GS  NLA ALA ER    +EE     ++ LMRLL E +G +     + ND +CCVCMGR+KGAAFIPCGHT+CRVCSRE+W+NRG CPLCNRS+ D+L ++
Sbjct:    1 MSQLGDLLRESEDGTRSERTMMMSLLEEDQINGGDRTMSKWTTLKQRLRFDWVGCCGKPLTLR--LR-QAETPIVVDDDDDEEESQNQVVDFSDPGTGTELDCLT-----RGSTRNLAEALAEERLAHVTEEETAVTKVPLMRLLAESDGCDSTTTWLGNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT3G25030.3 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=210 | 201606)

HSP 1 Score: 113.62 bits (283), Expect = 2.285e-31
Identity = 61/115 (53.04%), Postives = 71/115 (61.74%), Query Frame = 0 
Query:  105 MNLAAALAAERQL----------RESEEGRMSLMRLLEEKEGG------------EDAAVDNDSV-CCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            + L A LA ER L          RE E  RMSLM LLEE EG             E AAV    + CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RGNCPLCN ++L++L +F
Sbjct:   96 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 210
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT3G25030.4 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 114.005 bits (284), Expect = 5.248e-31
Identity = 74/185 (40.00%), Postives = 93/185 (50.27%), Query Frame = 0 
Query:   40 RTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQ-----TNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQL----------RESEEGRMSLMRLLEEKEGG------------EDAAVDNDSV-CCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            ++L+E+LR    G    +    P+L  +   P    +  Q     +N G          V    S     + L A LA ER L          RE E  RMSLM LLEE EG             E AAV    + CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RGNCPLCN ++L++L +F
Sbjct:   77 KSLREKLRLKRNGSVWISSNSIPSL--DTPIPNRDNVSHQLGFLLSNSGN---------VTEEASSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT3G25030.2 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 114.005 bits (284), Expect = 5.248e-31
Identity = 74/185 (40.00%), Postives = 93/185 (50.27%), Query Frame = 0 
Query:   40 RTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQ-----TNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQL----------RESEEGRMSLMRLLEEKEGG------------EDAAVDNDSV-CCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            ++L+E+LR    G    +    P+L  +   P    +  Q     +N G          V    S     + L A LA ER L          RE E  RMSLM LLEE EG             E AAV    + CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RGNCPLCN ++L++L +F
Sbjct:   77 KSLREKLRLKRNGSVWISSNSIPSL--DTPIPNRDNVSHQLGFLLSNSGN---------VTEEASSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT3G25030.1 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 114.005 bits (284), Expect = 5.248e-31
Identity = 74/185 (40.00%), Postives = 93/185 (50.27%), Query Frame = 0 
Query:   40 RTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQ-----TNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQL----------RESEEGRMSLMRLLEEKEGG------------EDAAVDNDSV-CCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            ++L+E+LR    G    +    P+L  +   P    +  Q     +N G          V    S     + L A LA ER L          RE E  RMSLM LLEE EG             E AAV    + CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RGNCPLCN ++L++L +F
Sbjct:   77 KSLREKLRLKRNGSVWISSNSIPSL--DTPIPNRDNVSHQLGFLLSNSGN---------VTEEASSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT4G13100.4 (| RING/U-box superfamily protein | Chr4:7636547-7637498 REVERSE LENGTH=256 | 201606)

HSP 1 Score: 104.76 bits (260), Expect = 1.519e-27
Identity = 57/116 (49.14%), Postives = 69/116 (59.48%), Query Frame = 0 
Query:  105 MNLAAALAAERQLRESEEGRMSLMRLLEEKEG----------------------GEDAAVDNDSV--CCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            + L   LAAER+  E +  RMSLM LLE+ +G                      GE  AV   +   CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RGNCPLCN ++L +L IF
Sbjct:  143 LRLGTVLAAERE--EMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT4G13100.9 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606)

HSP 1 Score: 105.145 bits (261), Expect = 1.566e-27
Identity = 57/116 (49.14%), Postives = 69/116 (59.48%), Query Frame = 0 
Query:  105 MNLAAALAAERQLRESEEGRMSLMRLLEEKEG----------------------GEDAAVDNDSV--CCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            + L   LAAER+  E +  RMSLM LLE+ +G                      GE  AV   +   CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RGNCPLCN ++L +L IF
Sbjct:  146 LRLGTVLAAERE--EMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
[Close]
BLAST of evm.model.Chr03.1079 vs. Araport11
Match: AT4G13100.8 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606)

HSP 1 Score: 105.145 bits (261), Expect = 1.566e-27
Identity = 57/116 (49.14%), Postives = 69/116 (59.48%), Query Frame = 0 
Query:  105 MNLAAALAAERQLRESEEGRMSLMRLLEEKEG----------------------GEDAAVDNDSV--CCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            + L   LAAER+  E +  RMSLM LLE+ +G                      GE  AV   +   CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RGNCPLCN ++L +L IF
Sbjct:  146 LRLGTVLAAERE--EMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KSU2|A0A4D6KSU2_VIGUN (RING-type domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g85 PE=4 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 3.705e-140
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UR25|A0A1S3UR25_VIGRR (uncharacterized protein LOC106767921 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767921 PE=4 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 6.772e-122
Identity = 181/197 (91.88%), Postives = 183/197 (92.89%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQ-TNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTEREARTILG+LTDQMDAVDGAQRRRRT KERLRFSGMGCCGATWVFRPTLRDEGG P P     Q TNPGQD NPNRPECVGPRGSGSG  MNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCS+EMWL RG CPLCNRSVLDILHIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGMLTDQMDAVDGAQRRRRTFKERLRFSGMGCCGATWVFRPTLRDEGGPPPPQPQILQQTNPGQDSNPNRPECVGPRGSGSG--MNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSKEMWLKRGTCPLCNRSVLDILHIF 195
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RA51|A0A0S3RA51_PHAAN (RING-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G544300 PE=4 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 7.809e-122
Identity = 182/197 (92.39%), Postives = 183/197 (92.89%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQ-TNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTEREARTILGLLTDQMDA DGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGG P P     Q TNPGQD N NRPECVGPRGSGSG  MNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCS+EMWLNRG CPLCNRSVLDILHIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAADGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGPPPPQPQLLQQTNPGQDSNQNRPECVGPRGSGSG--MNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSKEMWLNRGTCPLCNRSVLDILHIF 195
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TTD7|A0A0L9TTD7_PHAAN (RING-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g322800 PE=4 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 7.809e-122
Identity = 182/197 (92.39%), Postives = 183/197 (92.89%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQ-TNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTEREARTILGLLTDQMDA DGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGG P P     Q TNPGQD N NRPECVGPRGSGSG  MNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCS+EMWLNRG CPLCNRSVLDILHIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAADGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGPPPPQPQLLQQTNPGQDSNQNRPECVGPRGSGSG--MNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSKEMWLNRGTCPLCNRSVLDILHIF 195
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BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|V7C9F7|V7C9F7_PHAVU (RING-type domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G082200g PE=4 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 7.177e-116
Identity = 176/197 (89.34%), Postives = 181/197 (91.88%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQ-TNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTEREARTILGLLTDQMD VDGAQRRRRTLKERLRFSG+GCCGATWVFR T+RDEGGTP PP   QQ TN GQDPNPNRPEC+GPRGSGSG  MNLAAALAAERQLRESEEGR+SLMRLLEE E G DAAV NDSVCCVCMGRKKGAAFIPCGHTFCRVCS+EMWL RG CPLCNRSVLDILHIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTDQMDVVDGAQRRRRTLKERLRFSGIGCCGATWVFRQTVRDEGGTPPPPPPPQQQTNSGQDPNPNRPECMGPRGSGSG--MNLAAALAAERQLRESEEGRVSLMRLLEETERGGDAAVSNDSVCCVCMGRKKGAAFIPCGHTFCRVCSKEMWLKRGTCPLCNRSVLDILHIF 195
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BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|A0A445G0K8|A0A445G0K8_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_044527 PE=4 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 6.884e-96
Identity = 156/200 (78.00%), Postives = 167/200 (83.50%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEG--RMSLMRLLEEKEGGEDA--AVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTEREARTILGLLT+QMD+V   QRRRRTLKERLRF+G+GCCGATWVFRP +RDEGG  Q  Q  Q+TN GQDPN   PE VGP  S S SGMNLAAALAAERQ RE E    R+SLMRLLEE EGG+ A  AV ND VCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG CPLCNRS+L+IL IF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIGCCGATWVFRPIVRDEGGGAQAQQQPQETNAGQDPNHTGPEHVGP--SQSSSGMNLAAALAAERQFREGEGTPLRVSLMRLLEETEGGDAAVEAVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|I1MR22|I1MR22_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100792613 PE=4 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 6.884e-96
Identity = 156/200 (78.00%), Postives = 167/200 (83.50%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEG--RMSLMRLLEEKEGGEDA--AVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTEREARTILGLLT+QMD+V   QRRRRTLKERLRF+G+GCCGATWVFRP +RDEGG  Q  Q  Q+TN GQDPN   PE VGP  S S SGMNLAAALAAERQ RE E    R+SLMRLLEE EGG+ A  AV ND VCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG CPLCNRS+L+IL IF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIGCCGATWVFRPIVRDEGGGAQAQQQPQETNAGQDPNHTGPEHVGP--SQSSSGMNLAAALAAERQFREGEGTPLRVSLMRLLEETEGGDAAVEAVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|I1KNH8|I1KNH8_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=106799504 PE=4 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 2.173e-94
Identity = 153/211 (72.51%), Postives = 165/211 (78.20%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESE-EG----------RMSLMRLLEEKE----GGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTERE RTILGLLT+QMD VD AQRRRRTLKERLRF+G+GCCGATWVFRP +R+EGG  Q    QQQTN  QDPNPN P+ V P  S SG+ MNLAAALAAERQLR+ E EG          R+SLMRLLEE E          V ND VCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG CPLCNRS+L+IL IF
Sbjct:    1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIGCCGATWVFRPIVREEGGGAQAH--QQQTNAAQDPNPNDPKYVSP--SPSGTSMNLAAALAAERQLRDGEGEGRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|A0A445K2D0|A0A445K2D0_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_019069 PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 1.063e-93
Identity = 153/211 (72.51%), Postives = 164/211 (77.73%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESE-EG----------RMSLMRLLEEKE----GGEDAAVDNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLRTERE RTILGLLT+QMD VD AQRRRRTLKERLRF+G+GCCGATWVFRP +R+EGG  Q    QQQTN  QDPNPN  E V P  S SG+ MNLAAALAAERQLR+ E EG          R+SLMRLLEE E          V ND VCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG CPLCNRS+L+IL IF
Sbjct:    1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIGCCGATWVFRPIVREEGGGAQAH--QQQTNAAQDPNPNGSEYVSP--SPSGTSMNLAAALAAERQLRDGEGEGRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
[Close]
BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JT98|A0A2K3JT98_TRIPR (RING/U-box domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g050318 PE=4 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 4.649e-88
Identity = 143/207 (69.08%), Postives = 158/207 (76.33%), Query Frame = 0 
Query:    1 MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSGMGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSGSGSGMNLAAALAAERQLRESEEG---------RMSLMRLLEEKE-GGEDAAVD-NDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF 196
            MSQLGLILQESLR +REARTILGLLT+QMD VD    RRR+LKER RF GMGCCGATWVFRP +R E       + ++ T   QDPNP  PECV P    SGSGMNLA ALAAERQ+R SEE          R+SLM+LLEEKE   E   V+ ND+VCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRGNCPLCNRS+L+IL IF
Sbjct:    1 MSQLGLILQESLRPQREARTILGLLTEQMDGVDLGTSRRRSLKERFRFIGMGCCGATWVFRPIIRHE-------REREATEQVQDPNPVEPECVNP--GSSGSGMNLATALAAERQMRGSEEASGGEGGTPWRVSLMKLLEEKEVENESTTVEGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 198
The following BLAST results are available for this feature:
BLAST of evm.model.Chr03.1079 vs.
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of evm.model.Chr03.1079 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT4G03965.19.851e-5547.51| RING/U-box superfamily protein | Chr4:1889576-18... [more]
AT4G22250.18.617e-5250.48| RING/U-box superfamily protein | Chr4:11767685-1... [more]
AT1G62370.19.162e-4644.81| RING/U-box superfamily protein | Chr1:23072575-2... [more]
AT3G25030.32.285e-3153.04| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.45.248e-3140.00| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.25.248e-3140.00| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.15.248e-3140.00| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT4G13100.41.519e-2749.14| RING/U-box superfamily protein | Chr4:7636547-76... [more]
AT4G13100.91.566e-2749.14| RING/U-box superfamily protein | Chr4:7636547-76... [more]
AT4G13100.81.566e-2749.14| RING/U-box superfamily protein | Chr4:7636547-76... [more]
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BLAST of evm.model.Chr03.1079 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6KSU2|A0A4D6KSU2_VIGUN3.705e-140100.00RING-type domain-containing protein OS=Vigna ungui... [more]
tr|A0A1S3UR25|A0A1S3UR25_VIGRR6.772e-12291.88uncharacterized protein LOC106767921 OS=Vigna radi... [more]
tr|A0A0S3RA51|A0A0S3RA51_PHAAN7.809e-12292.39RING-type domain-containing protein OS=Vigna angul... [more]
tr|A0A0L9TTD7|A0A0L9TTD7_PHAAN7.809e-12292.39RING-type domain-containing protein OS=Phaseolus a... [more]
tr|V7C9F7|V7C9F7_PHAVU7.177e-11689.34RING-type domain-containing protein OS=Phaseolus v... [more]
tr|A0A445G0K8|A0A445G0K8_GLYSO6.884e-9678.00RING-type domain-containing protein OS=Glycine soj... [more]
tr|I1MR22|I1MR22_SOYBN6.884e-9678.00RING-type domain-containing protein OS=Glycine max... [more]
tr|I1KNH8|I1KNH8_SOYBN2.173e-9472.51RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A445K2D0|A0A445K2D0_GLYSO1.063e-9372.51RING-type domain-containing protein OS=Glycine soj... [more]
tr|A0A2K3JT98|A0A2K3JT98_TRIPR4.649e-8869.08RING/U-box domain-containing protein OS=Trifolium ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 139..193
e-value: 1.7E-13
score: 51.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 145..190
e-value: 5.1E-11
score: 42.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..87
NoneNo IPR availablePANTHERPTHR46629OS01G0917900 PROTEINcoord: 5..196
NoneNo IPR availableCDDcd16449RING-HCcoord: 148..185
e-value: 4.69419E-8
score: 45.9397
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 142..192
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 148..186
score: 10.866448

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Chr03.1079_hau_v1 ID=evm.model.Chr03.1079_hau_v1; Name=evm.model.Chr03.1079; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=591bp
ATGAGTCAACTCGGTCTCATTTTACAGGAATCGCTCCGCACAGAGAGAGA
AGCAAGAACAATCCTGGGTCTGTTAACGGACCAAATGGACGCCGTCGATG
GAGCCCAACGGAGGAGACGCACGCTCAAAGAACGCCTCAGATTCTCCGGA
ATGGGCTGCTGCGGGGCCACCTGGGTTTTCCGACCAACCCTAAGGGACGA
AGGGGGGACACCACAACCACCACAACTACAACAACAAACAAACCCGGGTC
AAGATCCGAACCCGAACAGACCCGAATGCGTGGGTCCGAGGGGGTCGGGG
TCGGGTTCGGGCATGAATCTTGCGGCGGCGCTGGCGGCGGAGAGGCAGCT
GCGAGAATCTGAAGAGGGAAGGATGTCGTTGATGCGGCTGTTGGAGGAGA
AGGAGGGTGGTGAGGATGCGGCGGTGGATAATGATTCGGTGTGCTGCGTG
TGCATGGGGAGGAAGAAAGGGGCGGCATTTATCCCGTGTGGACACACTTT
CTGTAGAGTGTGTTCGAGAGAAATGTGGTTGAACAGAGGTAATTGTCCCC
TTTGTAACCGTTCCGTTCTCGACATTCTCCACATCTTCTGA
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protein sequence of evm.model.Chr03.1079_hau_v1

>evm.model.Chr03.1079_hau_v1 ID=evm.model.Chr03.1079_hau_v1; Name=evm.model.Chr03.1079_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=196bp
MSQLGLILQESLRTEREARTILGLLTDQMDAVDGAQRRRRTLKERLRFSG
MGCCGATWVFRPTLRDEGGTPQPPQLQQQTNPGQDPNPNRPECVGPRGSG
SGSGMNLAAALAAERQLRESEEGRMSLMRLLEEKEGGEDAAVDNDSVCCV
CMGRKKGAAFIPCGHTFCRVCSREMWLNRGNCPLCNRSVLDILHIF
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mRNA from alignment at Chr03:11354784..11355374+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Chr03.1079_hau_v1 ID=evm.model.Chr03.1079_hau_v1; Name=evm.model.Chr03.1079; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=591bp; location=Sequence derived from: Chr03:11354784..11355374+ (Vigna unguiculata subsp. sesquipedalis
ATGAGTCAACTCGGTCTCATTTTACAGGAATCGCTCCGCACAGAGAGAGA
AGCAAGAACAATCCTGGGTCTGTTAACGGACCAAATGGACGCCGTCGATG
GAGCCCAACGGAGGAGACGCACGCTCAAAGAACGCCTCAGATTCTCCGGA
ATGGGCTGCTGCGGGGCCACCTGGGTTTTCCGACCAACCCTAAGGGACGA
AGGGGGGACACCACAACCACCACAACTACAACAACAAACAAACCCGGGTC
AAGATCCGAACCCGAACAGACCCGAATGCGTGGGTCCGAGGGGGTCGGGG
TCGGGTTCGGGCATGAATCTTGCGGCGGCGCTGGCGGCGGAGAGGCAGCT
GCGAGAATCTGAAGAGGGAAGGATGTCGTTGATGCGGCTGTTGGAGGAGA
AGGAGGGTGGTGAGGATGCGGCGGTGGATAATGATTCGGTGTGCTGCGTG
TGCATGGGGAGGAAGAAAGGGGCGGCATTTATCCCGTGTGGACACACTTT
CTGTAGAGTGTGTTCGAGAGAAATGTGGTTGAACAGAGGTAATTGTCCCC
TTTGTAACCGTTCCGTTCTCGACATTCTCCACATCTTCTGA
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Coding sequence (CDS) from alignment at Chr03:11354784..11355374+

>evm.model.Chr03.1079_hau_v1 ID=evm.model.Chr03.1079_hau_v1; Name=evm.model.Chr03.1079; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=591bp; location=Sequence derived from: Chr03:11354784..11355374+ (Vigna unguiculata subsp. sesquipedalis
ATGAGTCAACTCGGTCTCATTTTACAGGAATCGCTCCGCACAGAGAGAGA
AGCAAGAACAATCCTGGGTCTGTTAACGGACCAAATGGACGCCGTCGATG
GAGCCCAACGGAGGAGACGCACGCTCAAAGAACGCCTCAGATTCTCCGGA
ATGGGCTGCTGCGGGGCCACCTGGGTTTTCCGACCAACCCTAAGGGACGA
AGGGGGGACACCACAACCACCACAACTACAACAACAAACAAACCCGGGTC
AAGATCCGAACCCGAACAGACCCGAATGCGTGGGTCCGAGGGGGTCGGGG
TCGGGTTCGGGCATGAATCTTGCGGCGGCGCTGGCGGCGGAGAGGCAGCT
GCGAGAATCTGAAGAGGGAAGGATGTCGTTGATGCGGCTGTTGGAGGAGA
AGGAGGGTGGTGAGGATGCGGCGGTGGATAATGATTCGGTGTGCTGCGTG
TGCATGGGGAGGAAGAAAGGGGCGGCATTTATCCCGTGTGGACACACTTT
CTGTAGAGTGTGTTCGAGAGAAATGTGGTTGAACAGAGGTAATTGTCCCC
TTTGTAACCGTTCCGTTCTCGACATTCTCCACATCTTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING