evm.model.Chr03.1106

Transcript Overview
Nameevm.model.Chr03.1106
Unique Nameevm.model.Chr03.1106_hau_v1
TypemRNA
OrganismVigna unguiculata subsp. sesquipedalis ()
Sequence length351
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr03chromosomeChr03:11577870..11578542 +Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvuaL0032Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0202Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0377Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0529Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0758Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuaL022Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL140Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL151Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivuaL030Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuaL022Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuaL0065Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuaL0124Cajanus cajan Asha genome v1.0Cajanus cajan
cavuaL585Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvuaL044Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuaL021Pisum sativum Cameor genome v1aPisum sativum
psvuaL289Pisum sativum Cameor genome v1aPisum sativum
psvuaL296Pisum sativum Cameor genome v1aPisum sativum
tifvuaL037Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvuaL286Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuaL459Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL444Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuaL037Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuaL446Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaL047Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuaL480Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuavuaR152Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuavuaR153Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vssvuaL033Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuazwsR195Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vssvuaL296Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuazwsR232Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuvuaL161Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL301Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL302Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaL023Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuaL533Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
jg48502.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat4g002200.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Hedin2.R1.4g240600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.003G085200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat04G0009200-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_027337219.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_20227Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-KK1_026065Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun03g440300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan01g325700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.4g184440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.TU.Chr03.1106evm.TU.Chr03.1106_hau_v1Vigna unguiculata subsp. sesquipedalisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr03.1106.exon1evm.model.Chr03.1106.exon1_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr03.1106.exon2evm.model.Chr03.1106.exon2_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr03.1106.exon3evm.model.Chr03.1106.exon3_hau_v1Vigna unguiculata subsp. sesquipedalisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Chr03.1106cds.evm.model.Chr03.1106_hau_v1Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr03.1106cds.evm.model.Chr03.1106_hau_v1_2Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr03.1106cds.evm.model.Chr03.1106_hau_v1_3Vigna unguiculata subsp. sesquipedalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr03.1106_hau_v1evm.model.Chr03.1106_hau_v1Vigna unguiculata subsp. sesquipedalispolypeptide
evm.model.Chr03.1106_hau_v1evm.model.Chr03.1106_hau_v1-proteinVigna unguiculata subsp. sesquipedalispolypeptide


Homology
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q8VYE5|E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.866e-25
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0 
Query:   26 EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            ++WCIA  Q    ELQ A+DWAC  G  DCS ++ +QPC+ P+T+ +HASY FN+YYQ+       C FN A++  D DPS+G+C Y + P
Sbjct:  389 KKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M2K6|PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.926e-25
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0 
Query:    5 MLKISIAMLFLTLSFQAYGQF---EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +L  + AML +  + Q  GQ    E WC+A     D  LQ AI+WAC  GGADC  I+   PC  P  ++  AS+VFN+YY +   +  +C FN+ A  T L+PS G+CKY
Sbjct:   15 ILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q94CD8|E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.706e-24
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0 
Query:   28 WCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +C+A     D++L   ++WAC  G A+C+ I+  QPCYLPN +K+HAS+ FN YYQ+ K  GG+C F+  AITT  DPS+ +C Y
Sbjct:  362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|O65399|E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 6.243e-23
Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 0 
Query:   26 EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            + +CIA +    + LQ A+DWAC  G ++CS+I+  + CY PN +K HAS+ FNSYYQ+     GSC F   A+ T  DPSHGSC +
Sbjct:  379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIF 465
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FJU9|E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.956e-21
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 0 
Query:   28 WCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            WCIA  +  + +L+ A+DWAC  G  DC+ I+ +QPC+ P+TL +HAS+VFNSY+Q+ +    +C F  A +  + DPS+  C Y
Sbjct:  369 WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIY 453
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZU91|E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.331e-19
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:   26 EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            + +CIA E+   + LQ A+DWAC  G  DCS +   + CY P+ +  H++Y FN+YYQ+     GSC F   A  T  DPS G+C +
Sbjct:  358 QTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVF 444
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q84V39|ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.310e-19
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 0 
Query:   26 EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            ++WC+   +  D +LQ  ID+ C   G DC  I+ N  C+ PNT++ HASY  NS+YQ        C F+     T  DPS+GSC +
Sbjct:   35 KKWCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSKGRNDFDCDFSGTGAITSSDPSNGSCSF 121
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C7U5|E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.195e-19
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:   26 EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            + +C A E    + LQ A+DWAC  G  DCS IK  + CY P+ +  HA+Y F++YY +  +   +C FN  A  T  DPSHG+C +
Sbjct:  366 QTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVF 452
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|P52409|E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.200e-18
Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 0 
Query:   27 EWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +WC+A +     +LQ  I++AC  G  DC  I+    C+ PN+L+ HASYV N+YYQ   H   +C F    I T  DPS+G CKY
Sbjct:  376 KWCVAKDGANGTDLQNNINYAC--GFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FZ86|PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-18
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 0 
Query:    5 MLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            M    + M+ L ++  + G    WC+  E   +  LQ+ +D+AC   GADC  I    PC+ PNT+K+H SY  NS++Q+     G+C F   A  +  DPS+ +C +
Sbjct:    1 MAVFVLVMILLAMAGHSSG---TWCVCKEGLSEAMLQKTLDYAC-GAGADCGPIHQTGPCFNPNTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPF 104
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT5G35740.1 (| Carbohydrate-binding X8 domain superfamily protein | Chr5:13910572-13911095 REVERSE LENGTH=119 | 201606)

HSP 1 Score: 151.754 bits (382), Expect = 1.009e-48
Identity = 67/103 (65.05%), Postives = 86/103 (83.50%), Query Frame = 0 
Query:   15 LTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKV-NQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            +TL  ++  + E+WCIADEQTPD+ELQ A+DWAC  GGADCSK++  NQPC+LPNT+++HAS+ FNSYYQ +K+KGGSCYF  AA+ T+LDPSHGSC+YE  P
Sbjct:   17 MTLPRRSEAESEQWCIADEQTPDDELQAALDWACGKGGADCSKMQQENQPCFLPNTIRDHASFAFNSYYQTYKNKGGSCYFKGAAMITELDPSHGSCQYEYNP 119
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT2G04910.2 (| Carbohydrate-binding X8 domain superfamily protein | Chr2:1723939-1724354 REVERSE LENGTH=104 | 201606)

HSP 1 Score: 141.354 bits (355), Expect = 1.013e-44
Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 0 
Query:   17 LSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            L F A  +F +WC+AD Q PD  +Q A+DWAC+ GGADCS I+ NQPC+LPNT+K+HAS VFN+YYQR+K  GGSC FNS A  T  DPSH SC +E +P
Sbjct:    4 LIFVAKAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNNYYQRYKRNGGSCNFNSTAFITQTDPSHDSCHFEYVP 103
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT2G04910.1 (| Carbohydrate-binding X8 domain superfamily protein | Chr2:1723980-1724354 REVERSE LENGTH=124 | 201606)

HSP 1 Score: 129.413 bits (324), Expect = 8.126e-40
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:   17 LSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPS 106
            L F A  +F +WC+AD Q PD  +Q A+DWAC+ GGADCS I+ NQPC+LPNT+K+HAS VFN+YYQR+K  GGSC FNS A  T  DPS
Sbjct:    4 LIFVAKAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNNYYQRYKRNGGSCNFNSTAFITQTDPS 93
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT4G29360.1 (| O-Glycosyl hydrolases family 17 protein | Chr4:14451562-14453687 REVERSE LENGTH=534 | 201606)

HSP 1 Score: 102.449 bits (254), Expect = 1.909e-26
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0 
Query:   26 EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            ++WCIA  Q    ELQ A+DWAC  G  DCS ++ +QPC+ P+T+ +HASY FN+YYQ+       C FN A++  D DPS+G+C Y + P
Sbjct:  389 KKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT4G29360.2 (| O-Glycosyl hydrolases family 17 protein | Chr4:14451562-14453687 REVERSE LENGTH=544 | 201606)

HSP 1 Score: 102.449 bits (254), Expect = 1.944e-26
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0 
Query:   26 EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            ++WCIA  Q    ELQ A+DWAC  G  DCS ++ +QPC+ P+T+ +HASY FN+YYQ+       C FN A++  D DPS+G+C Y + P
Sbjct:  399 KKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 489
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT3G58100.1 (| plasmodesmata callose-binding protein 5 | Chr3:21515397-21516329 REVERSE LENGTH=180 | 201606)

HSP 1 Score: 97.0561 bits (240), Expect = 1.971e-26
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0 
Query:    5 MLKISIAMLFLTLSFQAYGQF---EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +L  + AML +  + Q  GQ    E WC+A     D  LQ AI+WAC  GGADC  I+   PC  P  ++  AS+VFN+YY +   +  +C FN+ A  T L+PS G+CKY
Sbjct:   15 ILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT3G58100.2 (| plasmodesmata callose-binding protein 5 | Chr3:21515397-21516557 REVERSE LENGTH=256 | 201606)

HSP 1 Score: 96.6709 bits (239), Expect = 1.520e-25
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0 
Query:    5 MLKISIAMLFLTLSFQAYGQF---EEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +L  + AML +  + Q  GQ    E WC+A     D  LQ AI+WAC  GGADC  I+   PC  P  ++  AS+VFN+YY +   +  +C FN+ A  T L+PS G+CKY
Sbjct:   91 ILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 201
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT3G13560.5 (| O-Glycosyl hydrolases family 17 protein | Chr3:4425484-4427284 REVERSE LENGTH=505 | 201606)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-25
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0 
Query:   28 WCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +C+A     D++L   ++WAC  G A+C+ I+  QPCYLPN +K+HAS+ FN YYQ+ K  GG+C F+  AITT  DPS+ +C Y
Sbjct:  362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT3G13560.4 (| O-Glycosyl hydrolases family 17 protein | Chr3:4425484-4427284 REVERSE LENGTH=505 | 201606)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-25
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0 
Query:   28 WCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +C+A     D++L   ++WAC  G A+C+ I+  QPCYLPN +K+HAS+ FN YYQ+ K  GG+C F+  AITT  DPS+ +C Y
Sbjct:  362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446
[Close]
BLAST of evm.model.Chr03.1106 vs. Araport11
Match: AT3G13560.3 (| O-Glycosyl hydrolases family 17 protein | Chr3:4425484-4427284 REVERSE LENGTH=505 | 201606)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-25
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0 
Query:   28 WCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKY 112
            +C+A     D++L   ++WAC  G A+C+ I+  QPCYLPN +K+HAS+ FN YYQ+ K  GG+C F+  AITT  DPS+ +C Y
Sbjct:  362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KQG0|A0A4D6KQG0_VIGUN (Histidine kinase 2/3/4 OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g120 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.204e-83
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP
Sbjct:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|V7C9S2|V7C9S2_PHAVU (X8 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G085200g PE=4 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.748e-75
Identity = 104/116 (89.66%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            MNSPMLKI IA+L  TLSFQAYGQFEEWCIADEQTPDEELQRA+DWACE GGADCSKIKVNQPCYLPNTLK+HASY FN+YYQRFKHKG SCYFN+AAITTDLDPSHGSCKYEL P
Sbjct:    1 MNSPMLKILIALLLFTLSFQAYGQFEEWCIADEQTPDEELQRAMDWACEKGGADCSKIKVNQPCYLPNTLKDHASYAFNNYYQRFKHKGASCYFNAAAITTDLDPSHGSCKYELFP 116
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UQR0|A0A1S3UQR0_VIGRR (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767964 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.326e-69
Identity = 106/116 (91.38%), Postives = 111/116 (95.69%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            MNSPMLK+ IA+L L +SFQA+GQFEEWCIADEQTPDEELQRA+DWACENGGADCS IKVNQPCYLPNTLK HASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP
Sbjct:    1 MNSPMLKVLIALLLLAVSFQAHGQFEEWCIADEQTPDEELQRAMDWACENGGADCSMIKVNQPCYLPNTLKKHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RA46|A0A0S3RA46_PHAAN (X8 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G541200 PE=4 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 3.368e-69
Identity = 111/118 (94.07%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAY--GQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            MNSPMLKI IA+L LTLSFQAY  GQFEEWCIADEQTPDEELQRAIDWACENGGADCS IKVNQPCYLPN+LKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP
Sbjct:    1 MNSPMLKILIALLLLTLSFQAYVSGQFEEWCIADEQTPDEELQRAIDWACENGGADCSMIKVNQPCYLPNSLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 118
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TT73|A0A0L9TT73_PHAAN (X8 domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g325700 PE=4 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 3.368e-69
Identity = 111/118 (94.07%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAY--GQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            MNSPMLKI IA+L LTLSFQAY  GQFEEWCIADEQTPDEELQRAIDWACENGGADCS IKVNQPCYLPN+LKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP
Sbjct:    1 MNSPMLKILIALLLLTLSFQAYVSGQFEEWCIADEQTPDEELQRAIDWACENGGADCSMIKVNQPCYLPNSLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 118
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NDR5|A0A2K3NDR5_TRIPR (Glucan endo-1,3-beta-glucosidase 4-like protein OS=Trifolium pratense OX=57577 GN=L195_g024204 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 9.070e-68
Identity = 94/116 (81.03%), Postives = 107/116 (92.24%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            M SPMLKI IAML  TLSFQA GQF EWCIADEQTPD+ELQRA+DWAC  GGADCSKI+VNQPC+LPNT+K+HAS+VFN+YYQ+FK+KGGSCYFNSAAIT+DLDPSHGSCK+E +P
Sbjct:    1 MTSPMLKILIAMLLATLSFQASGQFMEWCIADEQTPDDELQRAMDWACHVGGADCSKIQVNQPCHLPNTVKDHASFVFNNYYQKFKNKGGSCYFNSAAITSDLDPSHGSCKFEFVP 116
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F808|A0A3Q0F808_VIGRR (glucan endo-1,3-beta-glucosidase 12 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767964 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 6.169e-67
Identity = 106/123 (86.18%), Postives = 111/123 (90.24%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAY-------GQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            MNSPMLK+ IA+L L +SFQA+       GQFEEWCIADEQTPDEELQRA+DWACENGGADCS IKVNQPCYLPNTLK HASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP
Sbjct:    1 MNSPMLKVLIALLLLAVSFQAHVLLEKFSGQFEEWCIADEQTPDEELQRAMDWACENGGADCSMIKVNQPCYLPNTLKKHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 123
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|G7JMV2|G7JMV2_MEDTR (Glucan endo-1,3-beta-glucosidase-like protein OS=Medicago truncatula OX=3880 GN=11444189 PE=4 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 6.997e-66
Identity = 91/116 (78.45%), Postives = 106/116 (91.38%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            M+S M+KI IAML +TLSFQA GQF EWCIADEQTPD++LQRA+DWAC  GGA+CS I+VN PCYLPNT+K+HASYVFN+YYQ+FKHKGGSCYFNSAAIT+DLDPSHGSCK+E +P
Sbjct:    1 MSSSMVKILIAMLLVTLSFQASGQFLEWCIADEQTPDDDLQRAMDWACHVGGANCSNIQVNHPCYLPNTMKDHASYVFNNYYQKFKHKGGSCYFNSAAITSDLDPSHGSCKFEYIP 116
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7XFW1|A0A3Q7XFW1_CICAR (glucan endo-1,3-beta-glucosidase 4-like OS=Cicer arietinum OX=3827 GN=LOC101500999 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.537e-63
Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            M SPMLKI IAML L LS QAYGQF EWCIADEQTPD+ELQRA++WAC  GGADC+ I++N PCYLPNT+K+HASYVFN+YYQ+FK+KGGSCYFNSAA+T+DLDPSHGSCK+E LP
Sbjct:    1 MTSPMLKILIAML-LGLSSQAYGQFMEWCIADEQTPDDELQRAMNWACNVGGADCTNIQLNHPCYLPNTVKDHASYVFNNYYQKFKNKGGSCYFNSAALTSDLDPSHGSCKFEFLP 115
[Close]
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Match: tr|K7L3Z7|K7L3Z7_SOYBN (X8 domain-containing protein OS=Glycine max OX=3847 GN=100802644 PE=4 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.712e-62
Identity = 97/116 (83.62%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:    1 MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACENGGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAITTDLDPSHGSCKYELLP 116
            M S MLKI +A+L L+LSFQAYGQFEEWCIADEQTPD+ELQRA++WAC  GGADCSKI+VNQPCYLPNTLK+HASY FN+YYQRFK+KGGSCYFNSAAITTDLDPSHGSCKYE++P
Sbjct:    1 MTSTMLKILMALLLLSLSFQAYGQFEEWCIADEQTPDDELQRAMEWACGKGGADCSKIQVNQPCYLPNTLKDHASYAFNNYYQRFKNKGGSCYFNSAAITTDLDPSHGSCKYEIVP 116
The following BLAST results are available for this feature:
BLAST of evm.model.Chr03.1106 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q8VYE5|E1312_ARATH1.866e-2547.25Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
sp|Q9M2K6|PDCB5_ARATH1.926e-2542.34PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabido... [more]
sp|Q94CD8|E134_ARATH1.706e-2448.24Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
sp|O65399|E131_ARATH6.243e-2347.13Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
sp|Q9FJU9|E1313_ARATH1.956e-2143.53Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
sp|Q9ZU91|E133_ARATH1.331e-1941.38Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
sp|Q84V39|ALL10_OLEEU5.310e-1939.08Major pollen allergen Ole e 10 OS=Olea europaea OX... [more]
sp|Q9C7U5|E132_ARATH7.195e-1941.38Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
sp|P52409|E13B_WHEAT3.200e-1843.02Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
sp|Q9FZ86|PDCB3_ARATH7.488e-1834.26PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabido... [more]
back to top
BLAST of evm.model.Chr03.1106 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT5G35740.11.009e-4865.05| Carbohydrate-binding X8 domain superfamily prote... [more]
AT2G04910.21.013e-4461.00| Carbohydrate-binding X8 domain superfamily prote... [more]
AT2G04910.18.126e-4062.22| Carbohydrate-binding X8 domain superfamily prote... [more]
AT4G29360.11.909e-2647.25| O-Glycosyl hydrolases family 17 protein | Chr4:1... [more]
AT4G29360.21.944e-2647.25| O-Glycosyl hydrolases family 17 protein | Chr4:1... [more]
AT3G58100.11.971e-2642.34| plasmodesmata callose-binding protein 5 | Chr3:2... [more]
AT3G58100.21.520e-2542.34| plasmodesmata callose-binding protein 5 | Chr3:2... [more]
AT3G13560.51.746e-2548.24| O-Glycosyl hydrolases family 17 protein | Chr3:4... [more]
AT3G13560.41.746e-2548.24| O-Glycosyl hydrolases family 17 protein | Chr3:4... [more]
AT3G13560.31.746e-2548.24| O-Glycosyl hydrolases family 17 protein | Chr3:4... [more]
back to top
BLAST of evm.model.Chr03.1106 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6KQG0|A0A4D6KQG0_VIGUN5.204e-83100.00Histidine kinase 2/3/4 OS=Vigna unguiculata OX=391... [more]
tr|V7C9S2|V7C9S2_PHAVU3.748e-7589.66X8 domain-containing protein OS=Phaseolus vulgaris... [more]
tr|A0A1S3UQR0|A0A1S3UQR0_VIGRR1.326e-6991.38PLASMODESMATA CALLOSE-BINDING PROTEIN 5 isoform X2... [more]
tr|A0A0S3RA46|A0A0S3RA46_PHAAN3.368e-6994.07X8 domain-containing protein OS=Vigna angularis va... [more]
tr|A0A0L9TT73|A0A0L9TT73_PHAAN3.368e-6994.07X8 domain-containing protein OS=Phaseolus angulari... [more]
tr|A0A2K3NDR5|A0A2K3NDR5_TRIPR9.070e-6881.03Glucan endo-1,3-beta-glucosidase 4-like protein OS... [more]
tr|A0A3Q0F808|A0A3Q0F808_VIGRR6.169e-6786.18glucan endo-1,3-beta-glucosidase 12 isoform X1 OS=... [more]
tr|G7JMV2|G7JMV2_MEDTR6.997e-6678.45Glucan endo-1,3-beta-glucosidase-like protein OS=M... [more]
tr|A0A3Q7XFW1|A0A3Q7XFW1_CICAR2.537e-6378.45glucan endo-1,3-beta-glucosidase 4-like OS=Cicer a... [more]
tr|K7L3Z7|K7L3Z7_SOYBN2.712e-6283.62X8 domain-containing protein OS=Glycine max OX=384... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012946X8 domainPFAMPF07983X8coord: 28..98
e-value: 6.1E-21
score: 74.9
NoneNo IPR availableGENE3D1.20.58.1040coord: 24..114
e-value: 4.2E-10
score: 41.9
IPR044788Carbohydrate-binding X8 domain-containing protein, plantPANTHERPTHR31044BETA-1,3 GLUCANASEcoord: 15..112

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Chr03.1106_hau_v1 ID=evm.model.Chr03.1106_hau_v1; Name=evm.model.Chr03.1106; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=351bp
ATGAATTCTCCAATGCTCAAAATTTCAATAGCTATGCTGTTTTTGACTCT
ATCTTTTCAAGCATATGGACAGTTTGAGGAATGGTGCATAGCAGATGAAC
AGACCCCAGATGAGGAGTTACAAAGGGCCATTGATTGGGCTTGTGAAAAT
GGTGGAGCAGATTGCAGCAAGATAAAAGTGAACCAACCCTGTTACCTTCC
AAATACCTTGAAGAACCATGCCTCCTATGTCTTCAACAGTTACTATCAGA
GGTTCAAGCACAAAGGAGGTTCTTGCTATTTCAATTCTGCTGCAATCACC
ACTGATCTTGACCCAAGTCATGGCTCATGCAAGTATGAATTGCTTCCTTG
A
back to top

protein sequence of evm.model.Chr03.1106_hau_v1

>evm.model.Chr03.1106_hau_v1 ID=evm.model.Chr03.1106_hau_v1; Name=evm.model.Chr03.1106_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=116bp
MNSPMLKISIAMLFLTLSFQAYGQFEEWCIADEQTPDEELQRAIDWACEN
GGADCSKIKVNQPCYLPNTLKNHASYVFNSYYQRFKHKGGSCYFNSAAIT
TDLDPSHGSCKYELLP
back to top

mRNA from alignment at Chr03:11577870..11578542+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Chr03.1106_hau_v1 ID=evm.model.Chr03.1106_hau_v1; Name=evm.model.Chr03.1106; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=673bp; location=Sequence derived from: Chr03:11577870..11578542+ (Vigna unguiculata subsp. sesquipedalis
ATGAATTCTCCAATGCTCAAAATTTCAATAGCTATGCTGTTTTTGACTCT
ATCTTTTCAAGCATATGGTAAAATCAGCATTACCTTACTTCACCTAAGTT
CATTCAATTTTGTGTTACTACGATGTATAACTAAATGCAAATCTCATCGT
ACAAGTCGATTTTGTAATGTTGAGTTAGACTTAAAATTCACTCTTTAAAA
TTCTGAGTTATTGGAAAAATTCTCAGGACAGTTTGAGGAATGGTGCATAG
CAGATGAACAGACCCCAGATGAGGAGTTACAAAGGGCCATTGATTGGGCT
TGTGAAAATGGTGGAGCAGATTGCAGCAAGATAAAAGTGAACCAACCCTG
TTACCTTCCAAATACCTTGAAGAACCATGCCTCCTATGTCTTCAACAGTT
ACTATCAGAGGTTCAAGCACAAAGGAGGTTCTTGCTATTTCAATTCTGCT
GCAATCACCACTGATCTTGACCCAAGTAACATCTCTAAATAATCTCTCAT
AACACAACTTCTCTTTAGATATAATGTCAAATTGCTTAGTTTTGCACTTG
TTTCATTGTTTTATCCTTGAACATTAACAATCACTGAAACATTAATTAAA
CCTCAATAGTGATATATCTTGTGTTTGCCCAATGGCAGGTCATGGCTCAT
GCAAGTATGAATTGCTTCCTTGA
back to top

Coding sequence (CDS) from alignment at Chr03:11577870..11578542+

>evm.model.Chr03.1106_hau_v1 ID=evm.model.Chr03.1106_hau_v1; Name=evm.model.Chr03.1106; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=351bp; location=Sequence derived from: Chr03:11577870..11578542+ (Vigna unguiculata subsp. sesquipedalis
ATGAATTCTCCAATGCTCAAAATTTCAATAGCTATGCTGTTTTTGACTCT
ATCTTTTCAAGCATATGGACAGTTTGAGGAATGGTGCATAGCAGATGAAC
AGACCCCAGATGAGGAGTTACAAAGGGCCATTGATTGGGCTTGTGAAAAT
GGTGGAGCAGATTGCAGCAAGATAAAAGTGAACCAACCCTGTTACCTTCC
AAATACCTTGAAGAACCATGCCTCCTATGTCTTCAACAGTTACTATCAGA
GGTTCAAGCACAAAGGAGGTTCTTGCTATTTCAATTCTGCTGCAATCACC
ACTGATCTTGACCCAAGTCATGGCTCATGCAAGTATGAATTGCTTCCTTG
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012946X8
IPR044788X8_dom_prot