evm.model.Chr09.1204

Transcript Overview
Nameevm.model.Chr09.1204
Unique Nameevm.model.Chr09.1204_hau_v1
TypemRNA
OrganismVigna unguiculata subsp. sesquipedalis ()
Sequence length969
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr09chromosomeChr09:20211561..20213591 +Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anvuaL0281Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0305Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0353Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL0736Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuaL1024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuaL195Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuaL680Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caivuaL467Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuaL572Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuaL330Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuaL413Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuaL660Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuaL1179Cajanus cajan Asha genome v1.0Cajanus cajan
crvuaL448Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuaL544Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuaL447Pisum sativum Cameor genome v1aPisum sativum
psvuaL453Pisum sativum Cameor genome v1aPisum sativum
psvuaL599Pisum sativum Cameor genome v1aPisum sativum
pvvuaL059Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvuaL283Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvuaL705Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vfhvuaL278Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaL371Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuaL424Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuavuaL130Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaL120Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvuaL369Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuazwsR572Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuazwsR606Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuazwsR630Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuvuaL399Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuaL463Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvuaL299Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuaL377Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuaL606Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Ca_14583.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-KK1_019400Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014644707.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_09725Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cr_12690.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat05G0034800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_04857Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg55998.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.2g208960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g169040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_004500844.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan09g035900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g257700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.TU.Chr09.1204evm.TU.Chr09.1204_hau_v1Vigna unguiculata subsp. sesquipedalisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr09.1204.exon1evm.model.Chr09.1204.exon1_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr09.1204.exon2evm.model.Chr09.1204.exon2_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr09.1204.exon3evm.model.Chr09.1204.exon3_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr09.1204.exon4evm.model.Chr09.1204.exon4_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr09.1204.exon5evm.model.Chr09.1204.exon5_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr09.1204.exon6evm.model.Chr09.1204.exon6_hau_v1Vigna unguiculata subsp. sesquipedalisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Chr09.1204cds.evm.model.Chr09.1204_hau_v1Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr09.1204cds.evm.model.Chr09.1204_hau_v1_2Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr09.1204cds.evm.model.Chr09.1204_hau_v1_3Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr09.1204cds.evm.model.Chr09.1204_hau_v1_4Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr09.1204cds.evm.model.Chr09.1204_hau_v1_5Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr09.1204cds.evm.model.Chr09.1204_hau_v1_6Vigna unguiculata subsp. sesquipedalisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr09.1204_hau_v1evm.model.Chr09.1204_hau_v1Vigna unguiculata subsp. sesquipedalispolypeptide
evm.model.Chr09.1204_hau_v1evm.model.Chr09.1204_hau_v1-proteinVigna unguiculata subsp. sesquipedalispolypeptide


Homology
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SGS2|HMGB9_ARATH (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 2.124e-133
Identity = 201/309 (65.05%), Postives = 238/309 (77.02%), Query Frame = 0 
Query:   14 KHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPS--NSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQH--ENAIVPFKSKGNRSGRRRRNKRRW---DPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQ 315
            K YP PLA H+ VV+DSS+FWDTLRRFH +M TKFMIPVIGGKELDLHVLYVEVTRR GYEKVV EKKWREVG +F+FSATTTSASFVLRKHYL+LL+HYEQVH F ARG +  P    F  N PS   E+A+VEY+P PS    ++   ++ +S  +  GTIEGKF+CGYLV VKLGSE+L GVLYH  +   P S P     NA+VP+   G R  R  + +R     DPNYPKPNRSGYNFFFAEKH  LK+LYPN+EREFTK+IG+SW++LS EERMVYQ+IGL+DKERY+REL EY+E ++LR 
Sbjct:   25 KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHP-IATFHAN-PSTSKEMALVEYTP-PSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEILNGVLYHSAQ-PGPSSSPTAVLNNAVVPYVETGRRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLRLRD 329
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|Q9MAT6|HMG15_ARATH (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.428e-82
Identity = 138/331 (41.69%), Postives = 204/331 (61.63%), Query Frame = 0 
Query:   18 APLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRP-----------ELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYH--PEKMVAPPSIPQHENAIVP--FKSKGNRSG-----------RRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
             P A ++ VV D  LF  +L R H L+GTKFM+P+IGG++LDLH L+VEVT R G  K++ E++W+EV + F F  T T+AS+VLRK+Y SLL +YEQ++FF++ G +   S       SPS RP           EL  + ++P+P  +++E      +  +  G I+GKFE GYLV+V +GSE L+GVLY   P+  V+    PQ  + ++P       N  G           R++   +R DP++PKPNRSGYNFFFAE+H  LK L+P ++R+ ++MIG+ WN L+ +E+++YQ   + DKERY+ E+ +Y+EK K  Q     +P
Sbjct:   20 TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSM-----QSPSARPCFIQGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVS-YQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVP 344
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LTT3|HMG10_ARATH (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.859e-66
Identity = 119/292 (40.75%), Postives = 165/292 (56.51%), Query Frame = 0 
Query:   21 APHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRR----WDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYK 308
            A +DD+VR+S+LFW+ LR F  L      +P +GG  LDLH L++EVT R G E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E V++ +   S    + +A            ++   SP P     E +          G I+GKF+ GYLV++KLGS+ L+GVLYH       P  P      +   S   +S +RR  K+      D   PK +RSGYNFFFAE++  LK  Y  +ER  TK IG  W++L+  E+ VYQ+ G++D ERY+ E+ EYK
Sbjct:   34 AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEALK----------SLANESPNPEEGIDEPQV----GYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYH------IPQTPSQSQQTMETPSAIVQSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LG02|HMG11_ARATH (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 1.546e-53
Identity = 104/293 (35.49%), Postives = 159/293 (54.27%), Query Frame = 0 
Query:   23 HDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNY-PKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLR 314
            + D+VR+  LFW+ LR FH     KF IP++GGK LDLH L+ EVT R G EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +++F+A  S +             W  E A+     K +N   +S+  +   +   G I+GKFE GYL+S K+GSE L+G+LYH    ++P +                + G+++    + D +  PK  R+GYNFF AE+   +KA    ++    K  G  W +LS  +R VY      D +RYK E+ +Y+  M+ R
Sbjct:   30 YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRCKEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQAPLSTF-------------WEKEKALKLLIEKSANRDKDSQELKPGTVI-TGIIDGKFESGYLISTKVGSEKLKGMLYH----ISPET----------------KRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLMESR 288
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|Q68CP9|ARID2_HUMAN (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 5.859e-16
Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:   21 APHDDVVRDSSLFWDTLRRFHFLMGTKFM-IPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFF 119
            AP D+  R    F D LR+FH   G+ F  IP +GGKELDLH LY  VT   G+ KV  + +W E+   F F  + ++A+F L+++YL  L  YE+VH F
Sbjct:    8 APPDER-RKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHF 106
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|E9Q7E2|ARID2_MOUSE (AT-rich interactive domain-containing protein 2 OS=Mus musculus OX=10090 GN=Arid2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.190e-16
Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:   21 APHDDVVRDSSLFWDTLRRFHFLMGTKFM-IPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFF 119
            AP D+  R    F D LR+FH   G+ F  IP +GGKELDLH LY  VT   G+ KV  + +W E+   F F  + ++A+F L+++YL  L  YE+VH F
Sbjct:    8 APPDER-RKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHF 106
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|P40632|NHP1_BABBO (High mobility group protein homolog NHP1 OS=Babesia bovis OX=5865 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 9.040e-12
Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 0 
Query:  224 NRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFT---KMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEK 310
            +R+G RR  K + DPN PK   S Y FF  EK   + A  P   ++     KMIG +WN+LS EE+  Y+ +   D+ RY+RE  EY ++
Sbjct:    6 DRTGVRRPRKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKPYERMSDEDRVRYEREKAEYAQR 95
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Match: sp|Q5XGD9|ARI3A_XENTR (AT-rich interactive domain-containing protein 3A OS=Xenopus tropicalis OX=8364 GN=arid3a PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.525e-10
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 0 
Query:   33 FWDTLRRFHFLMGTKF-MIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYE 114
            F D L  F    GT    IP++  + LDL++LYV VT + G  +V+ +K WRE+        + TSA+F LR  Y+  LY YE
Sbjct:  218 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYE 300
[Close]
BLAST of evm.model.Chr09.1204 vs. Araport11
Match: AT1G76110.1 (| HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein | Chr1:28555287-28557465 REVERSE LENGTH=338 | 201606)

HSP 1 Score: 385.571 bits (989), Expect = 2.173e-134
Identity = 201/309 (65.05%), Postives = 238/309 (77.02%), Query Frame = 0 
Query:   14 KHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPS--NSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQH--ENAIVPFKSKGNRSGRRRRNKRRW---DPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQ 315
            K YP PLA H+ VV+DSS+FWDTLRRFH +M TKFMIPVIGGKELDLHVLYVEVTRR GYEKVV EKKWREVG +F+FSATTTSASFVLRKHYL+LL+HYEQVH F ARG +  P    F  N PS   E+A+VEY+P PS    ++   ++ +S  +  GTIEGKF+CGYLV VKLGSE+L GVLYH  +   P S P     NA+VP+   G R  R  + +R     DPNYPKPNRSGYNFFFAEKH  LK+LYPN+EREFTK+IG+SW++LS EERMVYQ+IGL+DKERY+REL EY+E ++LR 
Sbjct:   25 KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHP-IATFHAN-PSTSKEMALVEYTP-PSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEILNGVLYHSAQ-PGPSSSPTAVLNNAVVPYVETGRRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLRLRD 329
[Close]
BLAST of evm.model.Chr09.1204 vs. Araport11
Match: AT1G04880.1 (| HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein | Chr1:1376106-1378264 REVERSE LENGTH=448 | 201606)

HSP 1 Score: 259.225 bits (661), Expect = 2.484e-83
Identity = 138/331 (41.69%), Postives = 204/331 (61.63%), Query Frame = 0 
Query:   18 APLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRP-----------ELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYH--PEKMVAPPSIPQHENAIVP--FKSKGNRSG-----------RRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
             P A ++ VV D  LF  +L R H L+GTKFM+P+IGG++LDLH L+VEVT R G  K++ E++W+EV + F F  T T+AS+VLRK+Y SLL +YEQ++FF++ G +   S       SPS RP           EL  + ++P+P  +++E      +  +  G I+GKFE GYLV+V +GSE L+GVLY   P+  V+    PQ  + ++P       N  G           R++   +R DP++PKPNRSGYNFFFAE+H  LK L+P ++R+ ++MIG+ WN L+ +E+++YQ   + DKERY+ E+ +Y+EK K  Q     +P
Sbjct:   20 TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSM-----QSPSARPCFIQGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVS-YQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVP 344
[Close]
BLAST of evm.model.Chr09.1204 vs. Araport11
Match: AT3G13350.1 (| HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein | Chr3:4335721-4337804 REVERSE LENGTH=319 | 201606)

HSP 1 Score: 213.772 bits (543), Expect = 2.925e-67
Identity = 119/292 (40.75%), Postives = 165/292 (56.51%), Query Frame = 0 
Query:   21 APHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRR----WDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYK 308
            A +DD+VR+S+LFW+ LR F  L      +P +GG  LDLH L++EVT R G E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E V++ +   S    + +A            ++   SP P     E +          G I+GKF+ GYLV++KLGS+ L+GVLYH       P  P      +   S   +S +RR  K+      D   PK +RSGYNFFFAE++  LK  Y  +ER  TK IG  W++L+  E+ VYQ+ G++D ERY+ E+ EYK
Sbjct:   34 AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEALK----------SLANESPNPEEGIDEPQV----GYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYH------IPQTPSQSQQTMETPSAIVQSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305
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BLAST of evm.model.Chr09.1204 vs. Araport11
Match: AT1G55650.1 (| HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein | Chr1:20796340-20798481 FORWARD LENGTH=337 | 201606)

HSP 1 Score: 181.8 bits (460), Expect = 1.582e-54
Identity = 104/293 (35.49%), Postives = 159/293 (54.27%), Query Frame = 0 
Query:   23 HDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNY-PKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLR 314
            + D+VR+  LFW+ LR FH     KF IP++GGK LDLH L+ EVT R G EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +++F+A  S +             W  E A+     K +N   +S+  +   +   G I+GKFE GYL+S K+GSE L+G+LYH    ++P +                + G+++    + D +  PK  R+GYNFF AE+   +KA    ++    K  G  W +LS  +R VY      D +RYK E+ +Y+  M+ R
Sbjct:   30 YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRCKEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQAPLSTF-------------WEKEKALKLLIEKSANRDKDSQELKPGTVI-TGIIDGKFESGYLISTKVGSEKLKGMLYH----ISPET----------------KRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLMESR 288
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6NUQ3|A0A4D6NUQ3_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3751 PE=4 SV=1)

HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP
Sbjct:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RAV3|A0A0S3RAV3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G023400 PE=4 SV=1)

HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0
Identity = 310/322 (96.27%), Postives = 315/322 (97.83%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSSV ET+AGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGS+FKFSATTTSASFVLRKHY SLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSS ESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKG+RSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEER+VYQNIGLRDKERYKRELTEYKE MKLR+T   GLP
Sbjct:    1 MSSVPETYAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFSATTTSASFVLRKHYFSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSPESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGHRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERLVYQNIGLRDKERYKRELTEYKESMKLRETP--GLP 320
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V9C6|A0A0L9V9C6_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g035900 PE=4 SV=1)

HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0
Identity = 310/322 (96.27%), Postives = 315/322 (97.83%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSSV ET+AGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGS+FKFSATTTSASFVLRKHY SLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSS ESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKG+RSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEER+VYQNIGLRDKERYKRELTEYKE MKLR+T   GLP
Sbjct:    1 MSSVPETYAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFSATTTSASFVLRKHYFSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSPESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGHRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERLVYQNIGLRDKERYKRELTEYKESMKLRETP--GLP 320
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U2D9|A0A1S3U2D9_VIGRR (high mobility group B protein 9 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761182 PE=4 SV=1)

HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0
Identity = 308/322 (95.65%), Postives = 316/322 (98.14%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSS+ ET+AGEDGKHYPAPLA HDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGS+FKFSATTTSASFVLRKHY SLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKP NSS+ESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKM APPSIPQHENAIVPFKSKG+RSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEER+VYQNIGLRDKERYKRELTEYKE+MKLR+T EVGLP
Sbjct:    1 MSSLPETYAGEDGKHYPAPLASHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFSATTTSASFVLRKHYFSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPLNSSAESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMAAPPSIPQHENAIVPFKSKGHRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERLVYQNIGLRDKERYKRELTEYKERMKLRETPEVGLP 322
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|I1JSY3|I1JSY3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100784746 PE=4 SV=1)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 284/322 (88.20%), Postives = 305/322 (94.72%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSS + T  GE+GKHYPAPLAPH+ VV+DS+LFWDTLRRFHF+MGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGS+FKF+ATTTSASFVLRKHY SLLYHYEQVHFFKARG +YTPS DAFSGNSPSWRPELAIVEYSPKP ++S ESRAE+TSCLSGNGTIEGKF+CGYLVSVKLGSEVLRGVLYHPE++V PPSIP+HE+AIVP   K +RSGRR++NKRRWDPNYPKPNRSGYNFFFAEKHY+LK LYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVG P
Sbjct:    1 MSSAARTPGGEEGKHYPAPLAPHEGVVKDSTLFWDTLRRFHFVMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFAATTTSASFVLRKHYFSLLYHYEQVHFFKARGPIYTPSADAFSGNSPSWRPELAIVEYSPKPMDNSPESRAEDTSCLSGNGTIEGKFDCGYLVSVKLGSEVLRGVLYHPEQLVPPPSIPKHESAIVPINRKPHRSGRRKKNKRRWDPNYPKPNRSGYNFFFAEKHYTLKTLYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGRP 322
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A445KUC3|A0A445KUC3_GLYSO (High mobility group B protein 9 isoform A OS=Glycine soja OX=3848 GN=D0Y65_008519 PE=4 SV=1)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 284/322 (88.20%), Postives = 305/322 (94.72%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSS + T  GE+GKHYPAPLAPH+ VV+DS+LFWDTLRRFHF+MGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGS+FKF+ATTTSASFVLRKHY SLLYHYEQVHFFKARG +YTPS DAFSGNSPSWRPELAIVEYSPKP ++S ESRAE+TSCLSGNGTIEGKF+CGYLVSVKLGSEVLRGVLYHPE++V PPSIP+HE+AIVP   K +RSGRR++NKRRWDPNYPKPNRSGYNFFFAEKHY+LK LYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVG P
Sbjct:    1 MSSAARTPGGEEGKHYPAPLAPHEGVVKDSTLFWDTLRRFHFVMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFAATTTSASFVLRKHYFSLLYHYEQVHFFKARGPIYTPSADAFSGNSPSWRPELAIVEYSPKPMDNSPESRAEDTSCLSGNGTIEGKFDCGYLVSVKLGSEVLRGVLYHPEQLVPPPSIPKHESAIVPINRKPHRSGRRKKNKRRWDPNYPKPNRSGYNFFFAEKHYTLKTLYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGRP 322
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|V7AR38|V7AR38_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G020700g PE=4 SV=1)

HSP 1 Score: 594.349 bits (1531), Expect = 0.000e+0
Identity = 301/323 (93.19%), Postives = 310/323 (95.98%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSI-PQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MS  + THA EDGKHYPAPL+PHDDVVRDSSLFWDTL+RFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGS+FKFS+TTTSASFVL+KHY SLLYHYEQVHFFKARG VYTPSTDA SGNSPSWRPELAIVEYSPKP NSS ESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVA P+I PQHENAIVPFKSK +RSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSL+PEERMVYQNIGLRDKERYKRELTEYKEKMKLRQT EVGLP
Sbjct:    1 MSPGTPTHAPEDGKHYPAPLSPHDDVVRDSSLFWDTLKRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFKFSSTTTSASFVLKKHYFSLLYHYEQVHFFKARGCVYTPSTDASSGNSPSWRPELAIVEYSPKPLNSSPESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVALPTIPPQHENAIVPFKSKAHRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLNPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTPEVGLP 323
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A371EC85|A0A371EC85_MUCPR (High mobility group B protein 9 OS=Mucuna pruriens OX=157652 GN=HMGB9 PE=4 SV=1)

HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0
Identity = 284/323 (87.93%), Postives = 303/323 (93.81%), Query Frame = 0 
Query:    1 MSSV--SETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKS-KGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVG 320
            MSS   S+   GEDGKHYPAPLAPH++VV+DS+LFWDTLRRFHF++GTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHY SLLYHYEQVHFFKARG +YTPS DAFSGNSPSWRPELAIVEYSPKP N+S ESRAE+T+CL GNGTIEGKF+CGYLVSVKLGSEVL+GVLYHP+++V PPS PQHENAIVPF   K +RSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHY+LK LYP+REREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQT EVG
Sbjct:   28 MSSAWRSQGSGGEDGKHYPAPLAPHEEVVKDSTLFWDTLRRFHFVIGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYFSLLYHYEQVHFFKARGPIYTPSADAFSGNSPSWRPELAIVEYSPKPINNSPESRAEDTTCLLGNGTIEGKFDCGYLVSVKLGSEVLKGVLYHPDELVPPPSFPQHENAIVPFNHRKPHRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYTLKTLYPSREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTPEVG 350
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A151TCP3|A0A151TCP3_CAJCA (AT-rich interactive domain-containing protein 2 OS=Cajanus cajan OX=3821 GN=KK1_019400 PE=4 SV=1)

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 281/322 (87.27%), Postives = 298/322 (92.55%), Query Frame = 0 
Query:    1 MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSSV     GEDGKHYPAPL+PH+DVV+DS+LFWDTLRRFHF+MGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGS+F+FSATTTSASFVLRKHY SLL+HYEQVHFFKARG +YTP  DAFSGNSPSWRPELAIVEYSPKP+N+  ES  ++TSCLSGNGTIEGKF+CGYLVSVKLGSEVLRGVLYHPE +V PPSIPQHENAIVPF  K +RSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLK+LYPNREREFTKMIGQSWNSLSPEER VYQNIGLRDKERYKRELTEYKEKMKLR T E   P
Sbjct:    1 MSSVVARTNGEDGKHYPAPLSPHEDVVKDSTLFWDTLRRFHFVMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSVFRFSATTTSASFVLRKHYFSLLFHYEQVHFFKARGPIYTPPPDAFSGNSPSWRPELAIVEYSPKPTNNGPESYVKDTSCLSGNGTIEGKFDCGYLVSVKLGSEVLRGVLYHPEHLVPPPSIPQHENAIVPFNRKPHRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKSLYPNREREFTKMIGQSWNSLSPEERTVYQNIGLRDKERYKRELTEYKEKMKLR-TPEAARP 321
[Close]
BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PJE3|A0A2K3PJE3_TRIPR (High mobility group B protein 9-like OS=Trifolium pratense OX=57577 GN=L195_g012080 PE=4 SV=1)

HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0
Identity = 260/328 (79.27%), Postives = 291/328 (88.72%), Query Frame = 0 
Query:    1 MSSVSETH--AGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASFVLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYSPKPSNSSSESRAE---ETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHPEKMVAPPS-IPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERYKRELTEYKEKMKLRQTSEVGLP 322
            MSS + T+   GE+GKHYP PLA H+DVV DS+LFW+TLRRFH LM TKFMIPVIGGKELDLHVLYVEVTRRSGYEKVV EKKWREVGS+F+FS+TTTSASFVLRKHYL+LLYHYEQVHFFK +G ++TPS DAFSGNSPSWRPELAIV+YSPK  N S+ES  E   ++SCL G GTIEGKF+CGY+VSVKLGSEVL+GVLYHPE++VA PS +PQH  A+VPF  + + SGRR+R KR+WDPNYPKPNRSGYNFFFAEKHY LK LYPNREREFTKMIGQSWNSLSPEERM+YQNIGLRDKERYKRELTEYKEKMK+ QT E+GLP
Sbjct:    1 MSSAARTNVSGGEEGKHYPPPLASHNDVVNDSTLFWNTLRRFHSLMATKFMIPVIGGKELDLHVLYVEVTRRSGYEKVVVEKKWREVGSVFRFSSTTTSASFVLRKHYLNLLYHYEQVHFFKVQGPIFTPSADAFSGNSPSWRPELAIVQYSPKMVNDSAESHDEVNVDSSCLLGKGTIEGKFDCGYIVSVKLGSEVLKGVLYHPEQVVAAPSLVPQH--AVVPFNLQSHSSGRRKRRKRKWDPNYPKPNRSGYNFFFAEKHYKLKELYPNREREFTKMIGQSWNSLSPEERMIYQNIGLRDKERYKRELTEYKEKMKVGQTEELGLP 326
The following BLAST results are available for this feature:
BLAST of evm.model.Chr09.1204 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
sp|Q9SGS2|HMGB9_ARATH2.124e-13365.05High mobility group B protein 9 OS=Arabidopsis tha... [more]
sp|Q9MAT6|HMG15_ARATH2.428e-8241.69High mobility group B protein 15 OS=Arabidopsis th... [more]
sp|Q9LTT3|HMG10_ARATH2.859e-6640.75High mobility group B protein 10 OS=Arabidopsis th... [more]
sp|Q9LG02|HMG11_ARATH1.546e-5335.49Putative high mobility group B protein 11 OS=Arabi... [more]
sp|Q68CP9|ARID2_HUMAN5.859e-1644.00AT-rich interactive domain-containing protein 2 OS... [more]
sp|E9Q7E2|ARID2_MOUSE6.190e-1644.00AT-rich interactive domain-containing protein 2 OS... [more]
sp|P40632|NHP1_BABBO9.040e-1240.00High mobility group protein homolog NHP1 OS=Babesi... [more]
sp|Q5XGD9|ARI3A_XENTR2.525e-1039.76AT-rich interactive domain-containing protein 3A O... [more]
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BLAST of evm.model.Chr09.1204 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G76110.12.173e-13465.05| HMG (high mobility group) box protein with ARID/... [more]
AT1G04880.12.484e-8341.69| HMG (high mobility group) box protein with ARID/... [more]
AT3G13350.12.925e-6740.75| HMG (high mobility group) box protein with ARID/... [more]
AT1G55650.11.582e-5435.49| HMG (high mobility group) box protein with ARID/... [more]
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BLAST of evm.model.Chr09.1204 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6NUQ3|A0A4D6NUQ3_VIGUN0.000e+0100.00Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A0S3RAV3|A0A0S3RAV3_PHAAN0.000e+096.27Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9V9C6|A0A0L9V9C6_PHAAN0.000e+096.27Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A1S3U2D9|A0A1S3U2D9_VIGRR0.000e+095.65high mobility group B protein 9 OS=Vigna radiata v... [more]
tr|I1JSY3|I1JSY3_SOYBN0.000e+088.20Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445KUC3|A0A445KUC3_GLYSO0.000e+088.20High mobility group B protein 9 isoform A OS=Glyci... [more]
tr|V7AR38|V7AR38_PHAVU0.000e+093.19Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A371EC85|A0A371EC85_MUCPR0.000e+087.93High mobility group B protein 9 OS=Mucuna pruriens... [more]
tr|A0A151TCP3|A0A151TCP3_CAJCA0.000e+087.27AT-rich interactive domain-containing protein 2 OS... [more]
tr|A0A2K3PJE3|A0A2K3PJE3_TRIPR0.000e+079.27High mobility group B protein 9-like OS=Trifolium ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036431ARID DNA-binding domain superfamilyGENE3D1.10.150.60coord: 22..125
e-value: 3.4E-26
score: 93.2
IPR036431ARID DNA-binding domain superfamilySUPERFAMILY46774ARID-likecoord: 25..126
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 241..308
e-value: 1.6E-11
score: 44.4
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 241..308
score: 14.017716
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 225..320
e-value: 1.9E-18
score: 68.6
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 238..311
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 31..114
e-value: 1.1E-17
score: 64.5
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 27..118
score: 25.588108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..239
NoneNo IPR availablePANTHERPTHR46691HIGH MOBILITY GROUP B PROTEIN 9coord: 4..315
NoneNo IPR availableCDDcd22009HMG-box_AtHMGB9-likecoord: 241..307
e-value: 3.38131E-33
score: 115.256
IPR045303HMGB9-like, ARID/BRIGHT DNA binding domainCDDcd16872ARID_HMGB9-likecoord: 29..114
e-value: 4.22617E-46
score: 149.337

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Chr09.1204_hau_v1 ID=evm.model.Chr09.1204_hau_v1; Name=evm.model.Chr09.1204; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=969bp
ATGTCATCTGTGTCGGAAACCCACGCCGGAGAAGACGGAAAACACTACCC
TGCTCCGCTCGCTCCTCATGACGACGTCGTCAGGGACTCCTCTCTTTTCT
GGGACACTCTCAGACGCTTTCACTTCCTCATGGGTACCAAGTTCATGATT
CCTGTGATTGGAGGGAAGGAGCTAGATTTGCACGTTCTTTACGTGGAAGT
TACCAGAAGAAGTGGCTACGAGAAGGTAGTTGCAGAGAAGAAGTGGAGGG
AAGTTGGTAGCATTTTCAAGTTCTCAGCAACCACCACAAGTGCTTCTTTT
GTGTTGAGGAAACATTACTTGAGTCTTCTTTATCATTACGAACAGGTTCA
CTTTTTCAAAGCTAGGGGTTCTGTTTATACTCCTTCAACAGATGCATTTT
CCGGGAACAGTCCTTCTTGGAGACCTGAATTAGCTATTGTGGAATATTCT
CCTAAGCCCTCCAATAGTAGTTCCGAATCCCGTGCTGAAGAAACTTCATG
TCTCTCAGGAAATGGAACAATAGAGGGAAAATTTGAGTGTGGTTATTTGG
TGTCTGTGAAACTGGGTTCAGAGGTTCTGAGAGGGGTGCTTTACCATCCA
GAAAAAATGGTTGCTCCTCCTTCGATTCCGCAGCACGAAAATGCGATTGT
GCCATTCAAAAGCAAAGGTAACCGTTCTGGTCGTAGGAGAAGAAACAAGA
GAAGGTGGGACCCTAACTATCCAAAGCCGAATAGGAGTGGCTATAACTTC
TTCTTTGCTGAAAAGCATTACTCTCTCAAAGCTCTCTACCCGAACAGAGA
AAGGGAGTTTACCAAGATGATTGGGCAGTCATGGAACAGTCTTAGCCCCG
AAGAACGAATGGTTTATCAGAACATCGGGTTAAGAGACAAAGAAAGGTAC
AAGAGAGAACTGACGGAGTACAAAGAGAAGATGAAGCTTAGGCAGACCTC
AGAAGTTGGACTTCCATAG
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protein sequence of evm.model.Chr09.1204_hau_v1

>evm.model.Chr09.1204_hau_v1 ID=evm.model.Chr09.1204_hau_v1; Name=evm.model.Chr09.1204_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=322bp
MSSVSETHAGEDGKHYPAPLAPHDDVVRDSSLFWDTLRRFHFLMGTKFMI
PVIGGKELDLHVLYVEVTRRSGYEKVVAEKKWREVGSIFKFSATTTSASF
VLRKHYLSLLYHYEQVHFFKARGSVYTPSTDAFSGNSPSWRPELAIVEYS
PKPSNSSSESRAEETSCLSGNGTIEGKFECGYLVSVKLGSEVLRGVLYHP
EKMVAPPSIPQHENAIVPFKSKGNRSGRRRRNKRRWDPNYPKPNRSGYNF
FFAEKHYSLKALYPNREREFTKMIGQSWNSLSPEERMVYQNIGLRDKERY
KRELTEYKEKMKLRQTSEVGLP
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mRNA from alignment at Chr09:20211561..20213591+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Chr09.1204_hau_v1 ID=evm.model.Chr09.1204_hau_v1; Name=evm.model.Chr09.1204; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=2031bp; location=Sequence derived from: Chr09:20211561..20213591+ (Vigna unguiculata subsp. sesquipedalis
ATGTCATCTGTGTCGGAAACCCACGCCGGAGAAGACGGAAAACACTACCC
TGCTCCGCTCGCTCCTCATGACGACGTCGTCAGGGACTCCTCTCTTTTCT
GGGACACTCTCAGACGCTTTCACTTCCTCATGGGTACCAAGTTCATGTGA
GCTTCTATTTTTTATTCTTCCGTTAATTTGTTTATTTATTTTCAGACTTT
TTTTCATTAATAAAAAATGTGGTGTTGATTTAATGGGGTTAAGGTTTGGT
TTTGGAAAGTGTTTCTGTGATAGATATTGTTGTTATTAAAAATGGTTAAA
ATAAAATGAAATAATGTGGACCGTTTTGGCCTGGTCAACTTGTGAAGGAT
TCCTGTGATTGGAGGGAAGGAGCTAGATTTGCACGTTCTTTACGTGGAAG
TTACCAGAAGAAGTGGCTACGAGAAGGTCCCTACAACCTCTTTACGACAC
TCCGATTATTATTTTATTTTTTATTTGTTAAATAAATTGACTAACTAGTG
AAGAAATGGAACATGTTTTCTTTTTGTAACCCCCGTCAGGTAGTTGCAGA
GAAGAAGTGGAGGGAAGTTGGTAGCATTTTCAAGTTCTCAGCAACCACCA
CAAGTGCTTCTTTTGTGTTGAGGAAACATTACTTGAGTCTTCTTTATCAT
TACGAACAGGTTCACTTTTTCAAAGCTAGGGGTTCTGTTTATACTCCTTC
AACAGGTGCCACATTACATTTATTTTATATTTGCTCATTTTTAATTTTTG
TTTAACCTGTTGATTAATGAATTGCGATTTTGCAGATGCATTTTCCGGGA
ACAGTCCTTCTTGGAGACCTGAATTAGCTATTGTGGAATATTCTCCTAAG
CCCTCCAATAGTAGTTCCGAATCCCGTGCTGAAGGTGAATCGACAATTCT
TTAAGTCAGGGAAAAAAAATTAAATTTCTAAGATTAAGTTGTTTAATTTT
GGGTTTTGCTATGCTAGTTCTTGGAACTGTCATCTCTGTGGAATGGGTTG
ATTAATTTCTGATTCATTTATCGATGTTGTTGCTCTCTCTAATAAATAAC
CCACATCTTGCTAATTAATGAAACTCGGTTTCTCTTGCGTAAGCTAATTA
CATTATTGGCTGCTTATTCATGTCATGGACACAATTTATCTGGGACATAC
GTTGGTTGAATGTTGAAAAGGTTGACTTCAACAAACCCACTAATAAATGT
TTAGTGTTATGTAAATGTAATTTGAAATGAATAATGGTTGGACAAGAACG
ATGTTGTAATTTTTAAGGTAGTGGTGTAGTTGGTCTTATTGGCATAATCC
TTGTTGTTATAGCTGATGCCGTTTTAAGCCAGGAACAATAATGCACTTAT
TTTATGTAAGTTGTCTGCACTTTGAAAGTGTTTGTTCAGTGCTGAAATTT
ACTGTTTGTTGTGTTGTGTTGTTTGTAGAAACTTCATGTCTCTCAGGAAA
TGGAACAATAGAGGGAAAATTTGAGTGTGGTTATTTGGTGTCTGTGAAAC
TGGGTTCAGAGGTTCTGAGAGGGGTGCTTTACCATCCAGAAAAAATGGTT
GCTCCTCCTTCGATTCCGCAGCACGAAAATGCGATTGTGCCATTCAAAAG
CAAAGGTAACCGTTCTGGTCGTAGGAGAAGAAACAAGAGAAGGTGGGACC
CTAACTATCCAAAGCCGAATAGGAGTGGCTATAACTTCTTCTTTGCTGAA
AAGCATTACTCTCTCAAAGCTCTCTACCCGAACAGAGAAAGGGAGTTTAC
CAAGATGATTGGGCAGTCATGGAACAGTCTTAGCCCCGAAGAACGAATGG
TAATTGTTTTTTTTTTTTTTGTTTCTTTCTATGTTGTTGTTATCTGGATT
ATTACAATGTAGTTTTTGATTAAAGCATGCATGTTGGAAAATAATAGATG
TTGGTTAATGATGTTTGGTGCAGGTTTATCAGAACATCGGGTTAAGAGAC
AAAGAAAGGTACAAGAGAGAACTGACGGAGTACAAAGAGAAGATGAAGCT
TAGGCAGACCTCAGAAGTTGGACTTCCATAG
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Coding sequence (CDS) from alignment at Chr09:20211561..20213591+

>evm.model.Chr09.1204_hau_v1 ID=evm.model.Chr09.1204_hau_v1; Name=evm.model.Chr09.1204; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=969bp; location=Sequence derived from: Chr09:20211561..20213591+ (Vigna unguiculata subsp. sesquipedalis
ATGTCATCTGTGTCGGAAACCCACGCCGGAGAAGACGGAAAACACTACCC
TGCTCCGCTCGCTCCTCATGACGACGTCGTCAGGGACTCCTCTCTTTTCT
GGGACACTCTCAGACGCTTTCACTTCCTCATGGGTACCAAGTTCATGATT
CCTGTGATTGGAGGGAAGGAGCTAGATTTGCACGTTCTTTACGTGGAAGT
TACCAGAAGAAGTGGCTACGAGAAGGTAGTTGCAGAGAAGAAGTGGAGGG
AAGTTGGTAGCATTTTCAAGTTCTCAGCAACCACCACAAGTGCTTCTTTT
GTGTTGAGGAAACATTACTTGAGTCTTCTTTATCATTACGAACAGGTTCA
CTTTTTCAAAGCTAGGGGTTCTGTTTATACTCCTTCAACAGATGCATTTT
CCGGGAACAGTCCTTCTTGGAGACCTGAATTAGCTATTGTGGAATATTCT
CCTAAGCCCTCCAATAGTAGTTCCGAATCCCGTGCTGAAGAAACTTCATG
TCTCTCAGGAAATGGAACAATAGAGGGAAAATTTGAGTGTGGTTATTTGG
TGTCTGTGAAACTGGGTTCAGAGGTTCTGAGAGGGGTGCTTTACCATCCA
GAAAAAATGGTTGCTCCTCCTTCGATTCCGCAGCACGAAAATGCGATTGT
GCCATTCAAAAGCAAAGGTAACCGTTCTGGTCGTAGGAGAAGAAACAAGA
GAAGGTGGGACCCTAACTATCCAAAGCCGAATAGGAGTGGCTATAACTTC
TTCTTTGCTGAAAAGCATTACTCTCTCAAAGCTCTCTACCCGAACAGAGA
AAGGGAGTTTACCAAGATGATTGGGCAGTCATGGAACAGTCTTAGCCCCG
AAGAACGAATGGTTTATCAGAACATCGGGTTAAGAGACAAAGAAAGGTAC
AAGAGAGAACTGACGGAGTACAAAGAGAAGATGAAGCTTAGGCAGACCTC
AGAAGTTGGACTTCCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036431ARID_dom_sf
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf
IPR001606ARID_dom
IPR045303ARID_HMGB9-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding