evm.model.Chr11.1193
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.model.Chr11.1193 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SRN4|GIR2_ARATH (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-24 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 1 MSKRAR-SPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEA-----EETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 95
MS+R + P+LE+ LNLSPP + S +S + S++TS SSCVS E E +M+LVGCPRCLMYVMLS+ DPKCPKCKSTVLLDFL
Sbjct: 1 MSRRNKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSP--------SSCVSSETNQEENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFL 93
BLAST of evm.model.Chr11.1193 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FNI1|GIR1_ARATH (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.012e-21 Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 6 RSPRLEVTLNLSPPRAATSVVSSS------DLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLN 96
RSP+LE+ LNLSPP ++ + S + S+ + E S + ET +M+LVGCPRCLMYVMLSE DPKCPKCKSTVLLDFL+
Sbjct: 4 RSPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLH 100
BLAST of evm.model.Chr11.1193 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FMS4|SIED1_ARATH (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 2.289e-10 Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 0 Query: 60 RAMLLVGCPRCLMYVMLS-EVDPKCPKCKSTVLLDFLNNEENNK 102
++M++VGCP C+MY++ S E DP+CP+C S VLLDFL + K
Sbjct: 47 KSMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKK 90
BLAST of evm.model.Chr11.1193 vs. Araport11
Match: AT3G11600.1 (| E3 ubiquitin-protein ligase | Chr3:3667337-3667690 FORWARD LENGTH=117 | 201606) HSP 1 Score: 90.5077 bits (223), Expect = 8.455e-25 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 1 MSKRAR-SPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEA-----EETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 95
MS+R + P+LE+ LNLSPP + S +S + S++TS SSCVS E E +M+LVGCPRCLMYVMLS+ DPKCPKCKSTVLLDFL
Sbjct: 1 MSRRNKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSP--------SSCVSSETNQEENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFL 93
BLAST of evm.model.Chr11.1193 vs. Araport11
Match: AT5G06270.2 (| hypothetical protein | Chr5:1912895-1913263 FORWARD LENGTH=122 | 201606) HSP 1 Score: 85.5001 bits (210), Expect = 1.035e-22 Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 6 RSPRLEVTLNLSPPRAATSVVSSS------DLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLN 96
RSP+LE+ LNLSPP ++ + S + S+ + E S + ET +M+LVGCPRCLMYVMLSE DPKCPKCKSTVLLDFL+
Sbjct: 4 RSPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLH 100
BLAST of evm.model.Chr11.1193 vs. Araport11
Match: AT5G06270.1 (| hypothetical protein | Chr5:1912895-1913263 FORWARD LENGTH=122 | 201606) HSP 1 Score: 85.5001 bits (210), Expect = 1.035e-22 Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 6 RSPRLEVTLNLSPPRAATSVVSSS------DLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLN 96
RSP+LE+ LNLSPP ++ + S + S+ + E S + ET +M+LVGCPRCLMYVMLSE DPKCPKCKSTVLLDFL+
Sbjct: 4 RSPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLH 100
BLAST of evm.model.Chr11.1193 vs. Araport11
Match: AT5G22270.1 (| hypothetical protein | Chr5:7372487-7372768 REVERSE LENGTH=93 | 201606) HSP 1 Score: 55.8398 bits (133), Expect = 2.342e-11 Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 0 Query: 60 RAMLLVGCPRCLMYVMLS-EVDPKCPKCKSTVLLDFLNNEENNK 102
++M++VGCP C+MY++ S E DP+CP+C S VLLDFL + K
Sbjct: 47 KSMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKK 90
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LH76|A0A4D6LH76_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2549 PE=4 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.965e-67 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 105
MSKRARSPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH
Sbjct: 1 MSKRARSPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 105
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SBW0|A0A0S3SBW0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G159200 PE=4 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 9.639e-64 Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 105
MSKRARSPRLEV+LNLSPPRAA+SV SSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH
Sbjct: 1 MSKRARSPRLEVSLNLSPPRAASSV-SSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 104
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V640|A0A0L9V640_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g133300 PE=4 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 9.639e-64 Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 105
MSKRARSPRLEV+LNLSPPRAA+SV SSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH
Sbjct: 1 MSKRARSPRLEVSLNLSPPRAASSV-SSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 104
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VZ34|A0A1S3VZ34_VIGRR (uncharacterized protein LOC106779913 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779913 PE=4 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 4.532e-63 Identity = 101/105 (96.19%), Postives = 104/105 (99.05%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 105
MSKRARSPRLEV+LNLSPPRAA+SV SSSDLSSDSSS+SSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH
Sbjct: 1 MSKRARSPRLEVSLNLSPPRAASSV-SSSDLSSDSSSSSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 104
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|I1LKN5|I1LKN5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100775986 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.506e-47 Identity = 83/96 (86.46%), Postives = 87/96 (90.62%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAA-TSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 95
MSKR RSPRLE+ LNLSPPRAA TS++SSS+LS SS SS VSVQSLESSCVS EAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL
Sbjct: 1 MSKRVRSPRLELRLNLSPPRAAATSIISSSELSPTESSMSSPVSVQSLESSCVSSEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 96
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QF51|A0A0B2QF51_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_030106 PE=4 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.506e-47 Identity = 83/96 (86.46%), Postives = 87/96 (90.62%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAA-TSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 95
MSKR RSPRLE+ LNLSPPRAA TS++SSS+LS SS SS VSVQSLESSCVS EAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL
Sbjct: 1 MSKRVRSPRLELRLNLSPPRAAATSIISSSELSPTESSMSSPVSVQSLESSCVSSEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 96
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|C6TAX6|C6TAX6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.292e-46 Identity = 81/96 (84.38%), Postives = 85/96 (88.54%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAA-TSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 95
MSKR RSPRLE+ LNLSPPRAA TS++SSS+LS SS SS VSVQSLESSCVS E EETRAML VGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL
Sbjct: 1 MSKRVRSPRLELRLNLSPPRAAATSIISSSELSPTESSMSSPVSVQSLESSCVSSEGEETRAMLFVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL 96
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|A0A445HN07|A0A445HN07_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_033813 PE=4 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.040e-45 Identity = 91/104 (87.50%), Postives = 96/104 (92.31%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAA-TSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKK 103
MSKRARSPRLE+ LNLSPPRAA TS++SSS+LSS SST S VSVQSLESSCVS EAEETRAMLLVGCPRCL+YVMLSEVDPKCPKCKSTVLLDFLNNEENN K
Sbjct: 1 MSKRARSPRLELRLNLSPPRAAATSIISSSELSSTESSTLSPVSVQSLESSCVSSEAEETRAMLLVGCPRCLLYVMLSEVDPKCPKCKSTVLLDFLNNEENNTK 104
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|I1LRJ7|I1LRJ7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102667525 PE=4 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.040e-45 Identity = 91/104 (87.50%), Postives = 96/104 (92.31%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAA-TSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKK 103
MSKRARSPRLE+ LNLSPPRAA TS++SSS+LSS SST S VSVQSLESSCVS EAEETRAMLLVGCPRCL+YVMLSEVDPKCPKCKSTVLLDFLNNEENN K
Sbjct: 1 MSKRARSPRLELRLNLSPPRAAATSIISSSELSSTESSTLSPVSVQSLESSCVSSEAEETRAMLLVGCPRCLLYVMLSEVDPKCPKCKSTVLLDFLNNEENNTK 104
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Match: tr|V7AGR8|V7AGR8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G097300g PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.573e-39 Identity = 84/105 (80.00%), Postives = 87/105 (82.86%), Query Frame = 0 Query: 1 MSKRARSPRLEVTLNLSPPRAATSVVSSSDLSSDSSSTSSQVSVQSLESSCVSCEAEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENNKKIH 105
M KRARSPRLEV L+LSPPR S S SSTSSQVSVQSLESSCVSCE EETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFL N+EN+KK H
Sbjct: 1 MKKRARSPRLEVRLSLSPPRTPVSSSDPSS----ESSTSSQVSVQSLESSCVSCEVEETRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLKNKENSKKNH 101 The following BLAST results are available for this feature:
BLAST of evm.model.Chr11.1193 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of evm.model.Chr11.1193 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11) Total hits: 4 Position : 0 Zoom : x 1
BLAST of evm.model.Chr11.1193 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Chr11.1193_hau_v1 ID=evm.model.Chr11.1193_hau_v1; Name=evm.model.Chr11.1193; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=318bpback to top protein sequence of evm.model.Chr11.1193_hau_v1 >evm.model.Chr11.1193_hau_v1 ID=evm.model.Chr11.1193_hau_v1; Name=evm.model.Chr11.1193_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=105bpback to top mRNA from alignment at Chr11:37563792..37564109- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Chr11.1193_hau_v1 ID=evm.model.Chr11.1193_hau_v1; Name=evm.model.Chr11.1193; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=318bp; location=Sequence derived from: Chr11:37563792..37564109- (Vigna unguiculata subsp. sesquipedalisback to top Coding sequence (CDS) from alignment at Chr11:37563792..37564109- >evm.model.Chr11.1193_hau_v1 ID=evm.model.Chr11.1193_hau_v1; Name=evm.model.Chr11.1193; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=318bp; location=Sequence derived from: Chr11:37563792..37564109- (Vigna unguiculata subsp. sesquipedalisback to top |