evm.model.Chr11.921
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.model.Chr11.921 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FL53|FLA21_ARATH (Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana OX=3702 GN=FLA21 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.856e-14 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 3 QGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPPL 76
QGTCL TLL HK++ ++ V + E+N+V I++P++FL D L +HGV+ PFSPL PH D I PL
Sbjct: 126 QGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPLQPHS------DHLIHTPL 193
BLAST of evm.model.Chr11.921 vs. Araport11
Match: AT5G06920.1 (| FASCICLIN-like arabinogalactan protein 21 precursor | Chr5:2142858-2143919 FORWARD LENGTH=353 | 201606) HSP 1 Score: 71.2478 bits (173), Expect = 3.945e-15 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 3 QGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPPL 76
QGTCL TLL HK++ ++ V + E+N+V I++P++FL D L +HGV+ PFSPL PH D I PL
Sbjct: 126 QGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPLQPHS------DHLIHTPL 193
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LD00|A0A4D6LD00_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g736 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 6.340e-96 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPPLVLPTTPSPRTVFTGTASFICSVQRATLRSPSHCVLCLYFSAASLSRRFSSTSHASTAPTMLHHRGILR 144
MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPPLVLPTTPSPRTVFTGTASFICSVQRATLRSPSHCVLCLYFSAASLSRRFSSTSHASTAPTMLHHRGILR
Sbjct: 417 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPPLVLPTTPSPRTVFTGTASFICSVQRATLRSPSHCVLCLYFSAASLSRRFSSTSHASTAPTMLHHRGILR 560
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LGE2|A0A4D6LGE2_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2110 PE=4 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 9.216e-95 Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPPLVLPTTPSPRTVFTGTASFICSVQRATLRSPSHCVLCLYFSAASLSRRFSSTSHASTAPTMLHHRGILR 144
MSQGTCLTTLLRHKNISLTKVRP TNPVEINNVLISNPNIFLAD+LAVHGVLSPFSPLHPHDLLQRSLDFFIRPPLVLPTTPSPRTVFTGTASF CSVQRATLRSPSHCVLCLYFSA SLSRRFSSTSHASTAPTMLHHRGILR
Sbjct: 1 MSQGTCLTTLLRHKNISLTKVRPATNPVEINNVLISNPNIFLADELAVHGVLSPFSPLHPHDLLQRSLDFFIRPPLVLPTTPSPRTVFTGTASFTCSVQRATLRSPSHCVLCLYFSATSLSRRFSSTSHASTAPTMLHHRGILR 144
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6L957|A0A4D6L957_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g5348 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.437e-40 Identity = 70/75 (93.33%), Postives = 71/75 (94.67%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPP 75
MSQGTCLTTLLRHKNISLTKV P TN VEINNVLISNPNIFLADQLAVHGVL+PFSPLHPHDLLQR LDFFIRPP
Sbjct: 123 MSQGTCLTTLLRHKNISLTKVHPATNSVEINNVLISNPNIFLADQLAVHGVLAPFSPLHPHDLLQRGLDFFIRPP 197
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F7M1|A0A3Q0F7M1_VIGRR (fasciclin-like arabinogalactan protein 21 isoform X4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766657 PE=4 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.713e-39 Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPP 75
MSQGTCLTTLLRHKNISLTKV P TN VEINNVLISNPNIFL DQLAVHGVL+PFSPLHP DLLQR LDFFIRPP
Sbjct: 137 MSQGTCLTTLLRHKNISLTKVDPATNSVEINNVLISNPNIFLGDQLAVHGVLAPFSPLHPQDLLQRGLDFFIRPP 211
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F8X2|A0A3Q0F8X2_VIGRR (fasciclin-like arabinogalactan protein 21 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766657 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 8.683e-39 Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPP 75
MSQGTCLTTLLRHKNISLTKV P TN VEINNVLISNPNIFL DQLAVHGVL+PFSPLHP DLLQR LDFFIRPP
Sbjct: 137 MSQGTCLTTLLRHKNISLTKVDPATNSVEINNVLISNPNIFLGDQLAVHGVLAPFSPLHPQDLLQRGLDFFIRPP 211
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F841|A0A3Q0F841_VIGRR (fasciclin-like arabinogalactan protein 21 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766657 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.465e-39 Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPP 75
MSQGTCLTTLLRHKNISLTKV P TN VEINNVLISNPNIFL DQLAVHGVL+PFSPLHP DLLQR LDFFIRPP
Sbjct: 128 MSQGTCLTTLLRHKNISLTKVDPATNSVEINNVLISNPNIFLGDQLAVHGVLAPFSPLHPQDLLQRGLDFFIRPP 202
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FBP0|A0A3Q0FBP0_VIGRR (fasciclin-like arabinogalactan protein 21 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106766657 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.564e-39 Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPP 75
MSQGTCLTTLLRHKNISLTKV P TN VEINNVLISNPNIFL DQLAVHGVL+PFSPLHP DLLQR LDFFIRPP
Sbjct: 125 MSQGTCLTTLLRHKNISLTKVDPATNSVEINNVLISNPNIFLGDQLAVHGVLAPFSPLHPQDLLQRGLDFFIRPP 199
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QXR0|A0A0S3QXR0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G059600 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 5.839e-38 Identity = 67/75 (89.33%), Postives = 68/75 (90.67%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPP 75
MSQGTCLTTLLRHKNISLTKV P N VEINNVLISNPNIFL DQLAVHGVL+PFSPLHP DLLQR LDFFIRPP
Sbjct: 125 MSQGTCLTTLLRHKNISLTKVDPARNSVEINNVLISNPNIFLGDQLAVHGVLAPFSPLHPQDLLQRGLDFFIRPP 199
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TK12|A0A0L9TK12_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g001300 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.423e-38 Identity = 67/75 (89.33%), Postives = 68/75 (90.67%), Query Frame = 0 Query: 1 MSQGTCLTTLLRHKNISLTKVRPTTNPVEINNVLISNPNIFLADQLAVHGVLSPFSPLHPHDLLQRSLDFFIRPP 75
MSQGTCLTTLLRHKNISLTKV P N VEINNVLISNPNIFL DQLAVHGVL+PFSPLHP DLLQR LDFFIRPP
Sbjct: 125 MSQGTCLTTLLRHKNISLTKVDPARNSVEINNVLISNPNIFLGDQLAVHGVLAPFSPLHPQDLLQRGLDFFIRPP 199
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KM48|A0A4D6KM48_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g2304 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.912e-37 Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0 Query: 72 IRPPLVLPTTPSPRTVFTGTASFICSVQRATLRSPSHCVLCLYFSAASLSRRFSSTSHASTAPTMLHHRGIL 143
PPLVLPTTPSPRTVFTGTASF CSVQRATLRSPSHCVLCLYFSAASLSRR+SSTSHASTAPTMLHH GIL
Sbjct: 24 FNPPLVLPTTPSPRTVFTGTASFTCSVQRATLRSPSHCVLCLYFSAASLSRRYSSTSHASTAPTMLHHHGIL 95 The following BLAST results are available for this feature:
BLAST of evm.model.Chr11.921 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of evm.model.Chr11.921 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11) Total hits: 1 Position : 0 Zoom : x 1
BLAST of evm.model.Chr11.921 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.Chr11.921_hau_v1 ID=evm.model.Chr11.921_hau_v1; Name=evm.model.Chr11.921; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=435bpback to top protein sequence of evm.model.Chr11.921_hau_v1 >evm.model.Chr11.921_hau_v1 ID=evm.model.Chr11.921_hau_v1; Name=evm.model.Chr11.921_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=144bpback to top mRNA from alignment at Chr11:32595442..32595876+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>evm.model.Chr11.921_hau_v1 ID=evm.model.Chr11.921_hau_v1; Name=evm.model.Chr11.921; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=435bp; location=Sequence derived from: Chr11:32595442..32595876+ (Vigna unguiculata subsp. sesquipedalisback to top Coding sequence (CDS) from alignment at Chr11:32595442..32595876+ >evm.model.Chr11.921_hau_v1 ID=evm.model.Chr11.921_hau_v1; Name=evm.model.Chr11.921; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=435bp; location=Sequence derived from: Chr11:32595442..32595876+ (Vigna unguiculata subsp. sesquipedalisback to top |